Sed0018179 (gene) Chayote v1

Overview


Name	Sed0018179
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Pentatricopeptide repeat-containing protein
Location	LG10: 35603580 .. 35608226 (+)
RNA-Seq Expression	Sed0018179
Synteny	Sed0018179

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGGGTTCTTCGTCGAGTGTGAATAAGGCCACAAACTCATCGCCGATTCAAGAAGAAGCAACTGAACAATTCATTTCCATGGCTTCTCGTTCTCTCTTCCTCACCTTAAGCCGGTAAGTGTGGCTGTTTGTTTTGTTTTTTGTTTTTTGTTTTTTGTTTTTCGTTTGGTTACTAGGATGATGTTGGAGTGTTTAATTCCAAATTTCCACTTTGAAATTGAACTCAAATCTTAATCCTCAAATCGAATCCATGAGAAACGGATCACTGTTATCCTTTCAATCTCTAGCGTTTTCTCAGCATTCAAATGGGGTTGTGGGTTTGGATTTGGATTTGGATTTGATTGTTTTACCTCCTTCATTAATTACGGATTTTTGTTGATCGGTCCGAAAACCCTAGAAAATTCAGGAACAGAGGCTTGTTAAGTCAAAGTTTCCAAGCGATCCCGGTCTTCAATGAAGCCGGTGTATCGAATTATTGCTCTCGTGGAGCTCTGAGGAGTGAATCTTTTGAGGAATCAGTGAATTCTGAAGAATCCAATGACTTGAAGAGCAGAATATTTCGCCTCAGATTGCCCAAGCGAAGTGCTACCAATGTTCTTCAGAGATGGACGGGCGAGGGCAATCAAGTCTCGATCACTGAGCTTCGAGATATCTCCAAAGAGCTCCGAAGGGTTCAGCGGTATAAGCACGCTCTCGAGGTACGGTTTTATGTGTTTTCTTCTTTTTGTGTGCATTCTTGTACTTTCAGATAAGTTGCATTGCAATAACATAATTGAAGAGAAAAGCTATCTTTGGTTCTTAAGTGTGGTTGGGAGTCTCAAGGGGACATCCCTGGTCCCAGACCATGGGAAAGTGCTTAAATTAGAAAACCTTTCGATGTATCTTGGTGCCATAACCTAGGATATTGCCAGTAGTATAGTGGAACTAAGCTCCGTCTCCCGGTTATCAGGAAAAAAAATAGAAGAGTCCTTGTGATAACTCTTGAAGAAATCAAATTTGCACCTCTGTAAATAAACAAGATTACAGGTGAAAGTGAACAAGTAATTTGGAAATTTGCTGCTAAATAAGAAATGCTGGAGTAGAATGTAAGCTGCTGCCGTTTTAATTAATTCAAAGGAAATGTGTACTTATGATCTGTTTGAGCATTGTTGAGCTAGGTTTGTATTTGTAATTCTTAGTAATTTGGTTAGTCTAGTTAGTCAAGTCTTTCAGAGTGAGTTACACCCTTGTTTTAAGTTTAGAACAAGAAGATTCATATGGCTGTGAACCAAAATCAAAATGTATGTTGAAATTAAACTTGTGGAGATTGATGCAGGCCATATAAGATTTATGTAATTAGCAGAAGAATTTTTCTTTTAGAAACTAGAAAACAATTTTTAAATTAATTATTGGTGTCTGGTTGTTATGTCTCTCAAATTAAAGTAGTGCGAAGAGTAAATAAAACTATTTTCTGAGGGCTAAAGTTGCCAAAATAATTAAGCTCAAGAGTTCTTCGAAATCCATGTGCAACAAGATAGATCTCAAGTCTACTGATTCTATCATCGACACTTTCCTTTCATAGCAACTACATTTACCAATTTTTTAAATAGGAAACAAAAACTTTTCTTTGATATATGAAAAAGTACTGATACTGATACCATCGAAAGTAGAACATGTCCGTCATCGAAACCACGTATTATTACACGAGATCTTTGTGCCCCGTTCCAGGGCAGATTCCAACTAGGATTATCGATTTGTGGGTTCACCCTAATGGTGTAGAGGCATTGGCATCAAATTGAGAATCAGATATTAGTGTTCCTGCTTTGAATTGTTTTATCATAGTATGGTGGGGACTGGGAAGGGTGAATTTAAAAATAGAAATCAGTCGATAACAAAGCAAGAGGCAAAAGATGGAGAACCCTTGTTTGGTGAGGACGTGTCCAAATCACTAGCTGGTTTTGTGATAGTCAGTGACATCTCTAAGAAGAGGGCTAAAATCATCATCATTAGTGACTTGAGATGCTTTTTAACACATATCCATATCAGCCTACAAGGATCGGAGTAATCCAAAATTTTATGGCTAGAGCCTCCGGGGAAAAAGAGGCAACTTTATGAACGAAAAGGAATTCAGGTATAAATGTATTGCGGCCACTGTTTAGGGACGTATTAAAAATTTAATGGAAAGGAAAGCTCAGAAAATTATTAGATACAAAATCTGAACTTTCGAGGCTGGACCTTTTAAAGTTTAGAGATCTATTAGACGCTTTTAAAGTTCAAGAACCTATTTGACTCAAACCTGAGTTGAAAGACTAAACTTGTAAGTCAGCCATTTTTAAATCATCTGTTGATGTTTCTTTTTCACACACAAGTTTTATTGATGAACATGAAGACAAGTACAAGATGGTGGAAGAAAACACTTGGTTGATTGAGTGCATGAACGAAGCTTCTAAACTCACCCTTACTTTGAAGGAATTTGATATTTGCATCAAACTGTCTATCAATGAGTGCATGAAATTGAAGGCATAAGGATTTGGCTCCAGATATGTCTCGGAGGGAGCTGAGTAAATGTATTTTTGAACGTGATAAGGATAAATAGGAGCTGGTCCCTAATGTCAGCATGACTAACAGTAACTTTGAATGATTTAGCAGCTATACGACCAAATGAAGGAAAAGTGATTGTTGCGATTTGCTTAATCGATATGCTCAGAAAATTATAGGAATGTCAAGAACTGAGAGAGAATCCGGTACGCCCAAATTTTCTGAGTTGGCGTCGGTAACATGGATCAAAATTAGGAGTTGGTACACTATTGCAAGACCAATTTCTGGGTCCATATTTCTAAATTTACGAGGTTGTAGACAGTTTTGTGTAAGCCTAAGATTTTGCTGCAAAAGCTTTAGTCTCAAAGTGTTATGGCCCCTCCTTTCCCCTGCAACAGTACCATTTTCTCAGTCTTGTCCTTTATGCTGCATAAAGAGGAAGGAAATCCAGCATCTCAACAAATGTTTTGTAATGAGATTAATGCAAAAAATACGTTTATGGGGAAAGGAAAAAAACGGGAAGAAGATTCGATGGACTGTTGATCGATGCGAGGAACTGAAAGTTTGAGTCACAAAAATATTTTGTCGAAAAGAAAGTAGTTTCCTTGTCGGGAGCCTTCCTTAAATCCTTAGAGAATGTAATTCACATATTTTGACAGTCCAATTAAATGATTGAAGAACTGCATTTAGATGTTCATTCAAAGTTTACTCGGCATGCATAACTTATTTATGATCATGTAAATATGCTAATATTGATAAACAAGGGATATGTAACAAGATCCCAATCGTTTTCTTCGGTTGATAATCTGTGGGATGGGCGCACCCAGATATGTAGTAGGGCAAAGCTCTGATTTCTTGTTATAAAAAAAAACCATAAAGAACTTGTGATATGCTGATCCGGGGCTTTTATGTCATCTCCTTTATTTATAACGAATGCCACTTGTCTTGTCTCAATTACATTTTTGCACATCACTAACTGTTAATACGGTTTTCATGCTCGCAGATTTCAGAATGGATGTTGACTCATAATGGATTAGAGTTATCTGATTCTGACTTTGCAATCCGCATTGACTTGATGACAAAAGTATTTGGCATTGATGCAGCTGAACGATACTTCGAAGGCCTGCCTATCGATTCCAAAACCTGTGAGACATATACTGCTCTCCTTCACTCTTTTGCTGGCTCCAAATTGACCGAAAAGGCCGAAACTCTTTATCTAAAACTAAAGGAGACGGATGTACCTCTCACTGCCCTTCCATTCAACGAGATGATGACATTGTACATGTCGGTCGGGCAAGTCGAAAAGGTATCTTCGATAGTAGATGACCTTAAACAAAGGATGGTTCATCCCGACATTTTCACATATAATCTTTGGATCAGCTCATTGGCCGCAGCTTTAAATATGGATGGTGTTAGACAGATCCTCGACGAAATGAATCGCAACCCCAATTCAAATGAAGATTGGGTGCGATATATCAACCTTGCCAACATATACGTTACGTCAGCTCATCTGTTACATTCAGAGTCGAACACCGTAGTCGAGTCTGAGAGTGGCATTACACAGCGAGAATGGATTACATACGACCTCCTCATTATCTTGTATGCTGGTCTGGGAAACAAAGACAAAATTGATCAGATTTGGAGATCATTAAGGATGACAAAGCAAAAAATGACAAGCAGAAACTACATTTGCATTATTTCTTGTTACCTGATGCTTGATCATTTGGAGGAAATTGGAGAAGTTATTGATCAGTGGAAACAATCAACAAGTACTGATTTTGATGTTTCTGTCTGTAACAGGCTTGTAAATGCATTTGTTGAAGCTGGCTTCAATGTGAAAGCCAACAGTTTTGTCAACCTTTTGATTCAGAAGAACTGTAACCTCCCAGAATCAGAGTAGAAAGTAAGTTTAAATCTTAGTTTAGTGATTCTTCAAGTTTCACTTTTTTCAAAAAAAATTCAAATGGTGTTCAAGTCTCTAAATTTTGTCTAAGAAATGGTCTGTAACAACTAATCCTTCTGGAAATCTGTCCGAGCAGACTGAGCCTAGCAATAATTGACATGTATTCTTGAATTAGAAGTAGTCAATTCGAATGTTCGAATTCTCCATTTTCAAATATTGTTGTACTG

mRNA sequence

AGAGGGTTCTTCGTCGAGTGTGAATAAGGCCACAAACTCATCGCCGATTCAAGAAGAAGCAACTGAACAATTCATTTCCATGGCTTCTCGTTCTCTCTTCCTCACCTTAAGCCGAAAATTCAGGAACAGAGGCTTGTTAAGTCAAAGTTTCCAAGCGATCCCGGTCTTCAATGAAGCCGGTGTATCGAATTATTGCTCTCGTGGAGCTCTGAGGAGTGAATCTTTTGAGGAATCAGTGAATTCTGAAGAATCCAATGACTTGAAGAGCAGAATATTTCGCCTCAGATTGCCCAAGCGAAGTGCTACCAATGTTCTTCAGAGATGGACGGGCGAGGGCAATCAAGTCTCGATCACTGAGCTTCGAGATATCTCCAAAGAGCTCCGAAGGGTTCAGCGGTATAAGCACGCTCTCGAGATTTCAGAATGGATGTTGACTCATAATGGATTAGAGTTATCTGATTCTGACTTTGCAATCCGCATTGACTTGATGACAAAAGTATTTGGCATTGATGCAGCTGAACGATACTTCGAAGGCCTGCCTATCGATTCCAAAACCTGTGAGACATATACTGCTCTCCTTCACTCTTTTGCTGGCTCCAAATTGACCGAAAAGGCCGAAACTCTTTATCTAAAACTAAAGGAGACGGATGTACCTCTCACTGCCCTTCCATTCAACGAGATGATGACATTGTACATGTCGGTCGGGCAAGTCGAAAAGGTATCTTCGATAGTAGATGACCTTAAACAAAGGATGGTTCATCCCGACATTTTCACATATAATCTTTGGATCAGCTCATTGGCCGCAGCTTTAAATATGGATGGTGTTAGACAGATCCTCGACGAAATGAATCGCAACCCCAATTCAAATGAAGATTGGGTGCGATATATCAACCTTGCCAACATATACGTTACGTCAGCTCATCTGTTACATTCAGAGTCGAACACCGTAGTCGAGTCTGAGAGTGGCATTACACAGCGAGAATGGATTACATACGACCTCCTCATTATCTTGTATGCTGGTCTGGGAAACAAAGACAAAATTGATCAGATTTGGAGATCATTAAGGATGACAAAGCAAAAAATGACAAGCAGAAACTACATTTGCATTATTTCTTGTTACCTGATGCTTGATCATTTGGAGGAAATTGGAGAAGTTATTGATCAGTGGAAACAATCAACAAGTACTGATTTTGATGTTTCTGTCTGTAACAGGCTTGTAAATGCATTTGTTGAAGCTGGCTTCAATGTGAAAGCCAACAGTTTTGTCAACCTTTTGATTCAGAAGAACTGTAACCTCCCAGAATCAGAGTAGAAAGTAAGTTTAAATCTTAGTTTAGTGATTCTTCAAGTTTCACTTTTTTCAAAAAAAATTCAAATGGTGTTCAAGTCTCTAAATTTTGTCTAAGAAATGGTCTGTAACAACTAATCCTTCTGGAAATCTGTCCGAGCAGACTGAGCCTAGCAATAATTGACATGTATTCTTGAATTAGAAGTAGTCAATTCGAATGTTCGAATTCTCCATTTTCAAATATTGTTGTACTG

Coding sequence (CDS)

ATGGCTTCTCGTTCTCTCTTCCTCACCTTAAGCCGAAAATTCAGGAACAGAGGCTTGTTAAGTCAAAGTTTCCAAGCGATCCCGGTCTTCAATGAAGCCGGTGTATCGAATTATTGCTCTCGTGGAGCTCTGAGGAGTGAATCTTTTGAGGAATCAGTGAATTCTGAAGAATCCAATGACTTGAAGAGCAGAATATTTCGCCTCAGATTGCCCAAGCGAAGTGCTACCAATGTTCTTCAGAGATGGACGGGCGAGGGCAATCAAGTCTCGATCACTGAGCTTCGAGATATCTCCAAAGAGCTCCGAAGGGTTCAGCGGTATAAGCACGCTCTCGAGATTTCAGAATGGATGTTGACTCATAATGGATTAGAGTTATCTGATTCTGACTTTGCAATCCGCATTGACTTGATGACAAAAGTATTTGGCATTGATGCAGCTGAACGATACTTCGAAGGCCTGCCTATCGATTCCAAAACCTGTGAGACATATACTGCTCTCCTTCACTCTTTTGCTGGCTCCAAATTGACCGAAAAGGCCGAAACTCTTTATCTAAAACTAAAGGAGACGGATGTACCTCTCACTGCCCTTCCATTCAACGAGATGATGACATTGTACATGTCGGTCGGGCAAGTCGAAAAGGTATCTTCGATAGTAGATGACCTTAAACAAAGGATGGTTCATCCCGACATTTTCACATATAATCTTTGGATCAGCTCATTGGCCGCAGCTTTAAATATGGATGGTGTTAGACAGATCCTCGACGAAATGAATCGCAACCCCAATTCAAATGAAGATTGGGTGCGATATATCAACCTTGCCAACATATACGTTACGTCAGCTCATCTGTTACATTCAGAGTCGAACACCGTAGTCGAGTCTGAGAGTGGCATTACACAGCGAGAATGGATTACATACGACCTCCTCATTATCTTGTATGCTGGTCTGGGAAACAAAGACAAAATTGATCAGATTTGGAGATCATTAAGGATGACAAAGCAAAAAATGACAAGCAGAAACTACATTTGCATTATTTCTTGTTACCTGATGCTTGATCATTTGGAGGAAATTGGAGAAGTTATTGATCAGTGGAAACAATCAACAAGTACTGATTTTGATGTTTCTGTCTGTAACAGGCTTGTAAATGCATTTGTTGAAGCTGGCTTCAATGTGAAAGCCAACAGTTTTGTCAACCTTTTGATTCAGAAGAACTGTAACCTCCCAGAATCAGAGTAG

Protein sequence

MASRSLFLTLSRKFRNRGLLSQSFQAIPVFNEAGVSNYCSRGALRSESFEESVNSEESNDLKSRIFRLRLPKRSATNVLQRWTGEGNQVSITELRDISKELRRVQRYKHALEISEWMLTHNGLELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDSKTCETYTALLHSFAGSKLTEKAETLYLKLKETDVPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSLAAALNMDGVRQILDEMNRNPNSNEDWVRYINLANIYVTSAHLLHSESNTVVESESGITQREWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIISCYLMLDHLEEIGEVIDQWKQSTSTDFDVSVCNRLVNAFVEAGFNVKANSFVNLLIQKNCNLPESE

Homology

[Close]

BLAST of Sed0018179 vs. NCBI nr
Match: XP_038888933.1 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 711.8 bits (1836), Expect = 3.3e-201
Identity = 352/409 (86.06%), Postives = 380/409 (92.91%), Query Frame = 0


Query: 1   MASRSLFLTLSRKFRNRGLLSQSFQAIPVFNEAGVSNYCSRGALRSESFEESVNSEESND 60
           MASR+ FLT SR FRNRG L+Q+F+AIPVF+E  VSNYCS GALRSESF+ESVNSEE+ND
Sbjct: 1   MASRTFFLTFSRNFRNRGFLNQNFKAIPVFSEVSVSNYCSHGALRSESFDESVNSEETND 60

Query: 61  LKSRIFRLRLPKRSATNVLQRWTGEGNQVSITELRDISKELRRVQRYKHALEISEWMLTH 120
           LKSRIFRLRLPKRSATNVLQRW  EGNQV+ITELR+ISKELRR+QRYKHALEI EWM+TH
Sbjct: 61  LKSRIFRLRLPKRSATNVLQRWMSEGNQVTITELRNISKELRRIQRYKHALEILEWMVTH 120

Query: 121 NGLELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDSKTCETYTALLHSFAGSKLTEKAE 180
           N  ELSDSDFAIRIDLMTKVFGIDAAERYFEGLP DSKTCETYTALLHSFAGSKLTEKAE
Sbjct: 121 NEFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPTDSKTCETYTALLHSFAGSKLTEKAE 180

Query: 181 TLYLKLKETDVPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSL 240
           +LY K+ E D+PLTALPFNEMMTLYMSVGQVEKVSSI+DDLKQRMVHPDIFTYNLWISSL
Sbjct: 181 SLYAKIMELDIPLTALPFNEMMTLYMSVGQVEKVSSIIDDLKQRMVHPDIFTYNLWISSL 240

Query: 241 AAALNMDGVRQILDEMNRNPNSNEDWVRYINLANIYVTSAHLLHSESNTVVESESGITQR 300
           A ALN+DGVRQIL+EMN+ PNSNEDWVRYI+L NIYV SAHLLHS  N++VESESGI+QR
Sbjct: 241 AGALNIDGVRQILNEMNQKPNSNEDWVRYIDLVNIYVKSAHLLHSGLNSLVESESGISQR 300

Query: 301 EWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIISCYLMLDHLEEIGEVI 360
           EWITYDLLIILYAGLGNKDKIDQIWRSL+MTKQKMTSRNYICI+SCYLMLDHL+EIGEVI
Sbjct: 301 EWITYDLLIILYAGLGNKDKIDQIWRSLKMTKQKMTSRNYICILSCYLMLDHLKEIGEVI 360

Query: 361 DQWKQSTSTDFDVSVCNRLVNAFVEAGFNVKANSFVNLLIQKNCNLPES 410
           DQWKQST+TDFDVS CNRLVNAFVEAG N KAN+FV LLIQKNC   E+
Sbjct: 361 DQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANNFVTLLIQKNCEPTEA 409

[Close]

BLAST of Sed0018179 vs. NCBI nr
Match: XP_038888934.1 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X2 [Benincasa hispida])

HSP 1 Score: 702.2 bits (1811), Expect = 2.6e-198
Identity = 350/409 (85.57%), Postives = 378/409 (92.42%), Query Frame = 0


Query: 1   MASRSLFLTLSRKFRNRGLLSQSFQAIPVFNEAGVSNYCSRGALRSESFEESVNSEESND 60
           MASR+ FLT S   RNRG L+Q+F+AIPVF+E  VSNYCS GALRSESF+ESVNSEE+ND
Sbjct: 1   MASRTFFLTFS---RNRGFLNQNFKAIPVFSEVSVSNYCSHGALRSESFDESVNSEETND 60

Query: 61  LKSRIFRLRLPKRSATNVLQRWTGEGNQVSITELRDISKELRRVQRYKHALEISEWMLTH 120
           LKSRIFRLRLPKRSATNVLQRW  EGNQV+ITELR+ISKELRR+QRYKHALEI EWM+TH
Sbjct: 61  LKSRIFRLRLPKRSATNVLQRWMSEGNQVTITELRNISKELRRIQRYKHALEILEWMVTH 120

Query: 121 NGLELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDSKTCETYTALLHSFAGSKLTEKAE 180
           N  ELSDSDFAIRIDLMTKVFGIDAAERYFEGLP DSKTCETYTALLHSFAGSKLTEKAE
Sbjct: 121 NEFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPTDSKTCETYTALLHSFAGSKLTEKAE 180

Query: 181 TLYLKLKETDVPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSL 240
           +LY K+ E D+PLTALPFNEMMTLYMSVGQVEKVSSI+DDLKQRMVHPDIFTYNLWISSL
Sbjct: 181 SLYAKIMELDIPLTALPFNEMMTLYMSVGQVEKVSSIIDDLKQRMVHPDIFTYNLWISSL 240

Query: 241 AAALNMDGVRQILDEMNRNPNSNEDWVRYINLANIYVTSAHLLHSESNTVVESESGITQR 300
           A ALN+DGVRQIL+EMN+ PNSNEDWVRYI+L NIYV SAHLLHS  N++VESESGI+QR
Sbjct: 241 AGALNIDGVRQILNEMNQKPNSNEDWVRYIDLVNIYVKSAHLLHSGLNSLVESESGISQR 300

Query: 301 EWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIISCYLMLDHLEEIGEVI 360
           EWITYDLLIILYAGLGNKDKIDQIWRSL+MTKQKMTSRNYICI+SCYLMLDHL+EIGEVI
Sbjct: 301 EWITYDLLIILYAGLGNKDKIDQIWRSLKMTKQKMTSRNYICILSCYLMLDHLKEIGEVI 360

Query: 361 DQWKQSTSTDFDVSVCNRLVNAFVEAGFNVKANSFVNLLIQKNCNLPES 410
           DQWKQST+TDFDVS CNRLVNAFVEAG N KAN+FV LLIQKNC   E+
Sbjct: 361 DQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANNFVTLLIQKNCEPTEA 406

[Close]

BLAST of Sed0018179 vs. NCBI nr
Match: XP_008455132.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 701.4 bits (1809), Expect = 4.5e-198
Identity = 343/405 (84.69%), Postives = 382/405 (94.32%), Query Frame = 0


Query: 1   MASRSLFLTLSRKFRNRGLLSQSFQAIPVFNEAGVSNYCSRGALRSESFEESVNSEESND 60
           MASR+LFL  SRKFRNRG L+QSF++IPVFNEA +SNYCS GALRSESF++SVNSEE ND
Sbjct: 1   MASRTLFLAFSRKFRNRGFLNQSFKSIPVFNEANISNYCSHGALRSESFDDSVNSEEFND 60

Query: 61  LKSRIFRLRLPKRSATNVLQRWTGEGNQVSITELRDISKELRRVQRYKHALEISEWMLTH 120
           LKSRIF+LRLPKRSA  VL+RWT EGNQV+ITELR+ISKELR++QRYKHALEI EWM+TH
Sbjct: 61  LKSRIFQLRLPKRSAIRVLERWTSEGNQVTITELRNISKELRKIQRYKHALEILEWMVTH 120

Query: 121 NGLELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDSKTCETYTALLHSFAGSKLTEKAE 180
           N  +LSDSDFAIRIDLMTKVFG+DAAERYFEGLPID+KTCETYTALLHSFAGSKLT+KAE
Sbjct: 121 NKSDLSDSDFAIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAE 180

Query: 181 TLYLKLKETDVPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSL 240
           TLY K+KE+D+PLTALPFNEMMTLY S+GQVEKVSSIVDDLKQ+MVHPDIFTYNLWISSL
Sbjct: 181 TLYEKIKESDIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQKMVHPDIFTYNLWISSL 240

Query: 241 AAALNMDGVRQILDEMNRNPNSNEDWVRYINLANIYVTSAHLLHSESNTVVESESGITQR 300
           AAALN+DGV+QIL+EMN+NPNSNE+WVRYI L NIY+ SA+LLHS SN+VVES SGI+QR
Sbjct: 241 AAALNIDGVKQILNEMNQNPNSNENWVRYIELVNIYIKSANLLHSGSNSVVESASGISQR 300

Query: 301 EWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIISCYLMLDHLEEIGEVI 360
           EWITYDLLIILYAGLGNKD+IDQIWRSLRMTKQKMTSRNYICI+SCYLMLD L+EIGEVI
Sbjct: 301 EWITYDLLIILYAGLGNKDRIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGEVI 360

Query: 361 DQWKQSTSTDFDVSVCNRLVNAFVEAGFNVKANSFVNLLIQKNCN 406
           DQWKQST+TDFD+S CNRLVNAFVEAG N KANSFVN+LIQKNC+
Sbjct: 361 DQWKQSTTTDFDISSCNRLVNAFVEAGLNEKANSFVNVLIQKNCD 405

[Close]

BLAST of Sed0018179 vs. NCBI nr
Match: XP_022952903.1 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 701.4 bits (1809), Expect = 4.5e-198
Identity = 352/409 (86.06%), Postives = 380/409 (92.91%), Query Frame = 0


Query: 1   MASRSLFLTLSRKFRNRGLLSQSFQAIPVFNEAGVSNYCSRGALRSESFEESVNSEESND 60
           MASRSLFL+L+RKFRNRG L+QSF+AI VFNEA VSNYCS GALRSES +ESVNSEE+ND
Sbjct: 1   MASRSLFLSLNRKFRNRGFLNQSFKAILVFNEASVSNYCSHGALRSESLDESVNSEETND 60

Query: 61  LKSRIFRLRLPKRSATNVLQRWTGEGNQVSITELRDISKELRRVQRYKHALEISEWMLTH 120
           LKSRIFRLRLPKRSA NV+QRWT EGNQV+ITELR+ISKELRR+QRYKHALEI EWM++H
Sbjct: 61  LKSRIFRLRLPKRSAINVIQRWTSEGNQVTITELRNISKELRRLQRYKHALEILEWMVSH 120

Query: 121 NGLELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDSKTCETYTALLHSFAGSKLTEKAE 180
           N  ELSDSDFAIRIDLMTKVFGIDAAERYFEGLPI++KTCETYTALLHSFAGSKLTEKAE
Sbjct: 121 NENELSDSDFAIRIDLMTKVFGIDAAERYFEGLPINAKTCETYTALLHSFAGSKLTEKAE 180

Query: 181 TLYLKLKETDVPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSL 240
           TLY K+KE+ +PLTALPFNEMMTLY SVGQVEKVSSIVDDLKQ  VHPDIFTYNLWISSL
Sbjct: 181 TLYEKMKESGIPLTALPFNEMMTLYTSVGQVEKVSSIVDDLKQSKVHPDIFTYNLWISSL 240

Query: 241 AAALNMDGVRQILDEMNRNPNSNEDWVRYINLANIYVTSAHLLHSESNTVVESESGITQR 300
           AA LN+DGVR+ILDEMNRNPNSNE WVRYINL NIY+TSAHLLHSESN+VVESESGITQR
Sbjct: 241 AATLNIDGVRRILDEMNRNPNSNEVWVRYINLVNIYITSAHLLHSESNSVVESESGITQR 300

Query: 301 EWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIISCYLMLDHLEEIGEVI 360
           EWITYDLLIILYAG+GNKDKIDQIWRSLRMT+QKMTSRNYICI+SCYLMLDHL+EIGEVI
Sbjct: 301 EWITYDLLIILYAGMGNKDKIDQIWRSLRMTRQKMTSRNYICILSCYLMLDHLKEIGEVI 360

Query: 361 DQWKQSTSTDFDVSVCNRLVNAFVEAGFNVKANSFVNLLIQKNCNLPES 410
           DQWKQS+S DFDVS CNRLVNAFVEAGF  K NSFV +L  KNC   E+
Sbjct: 361 DQWKQSSSGDFDVSACNRLVNAFVEAGFKEKGNSFVTIL--KNCEPTEA 407

[Close]

BLAST of Sed0018179 vs. NCBI nr
Match: XP_011658826.1 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 [Cucumis sativus] >KGN43772.1 hypothetical protein Csa_017188 [Cucumis sativus])

HSP 1 Score: 699.5 bits (1804), Expect = 1.7e-197
Identity = 345/409 (84.35%), Postives = 380/409 (92.91%), Query Frame = 0


Query: 1   MASRSLFLTLSRKFRNRGLLSQSFQAIPVFNEAGVSNYCSRGALRSESFEESVNSEESND 60
           MASR+LFL  SRKFRNRG L+QSF++ PVFNEA VSNYCS GALRSESF+ESVN EE ND
Sbjct: 1   MASRALFLAFSRKFRNRGFLNQSFKSTPVFNEANVSNYCSHGALRSESFDESVNYEEFND 60

Query: 61  LKSRIFRLRLPKRSATNVLQRWTGEGNQVSITELRDISKELRRVQRYKHALEISEWMLTH 120
           LKSRIF+LRLPKRSA  VL+RWT EGNQV+I ELR+ISKELR++QRYKHALEI EWM++H
Sbjct: 61  LKSRIFQLRLPKRSAIRVLERWTSEGNQVTIAELRNISKELRKIQRYKHALEILEWMVSH 120

Query: 121 NGLELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDSKTCETYTALLHSFAGSKLTEKAE 180
           N  ELSDSDFAIRIDLMTKVFG+DAAERYFEGLPID+KTCETYTALLHSFAGSKLT+KAE
Sbjct: 121 NQSELSDSDFAIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAE 180

Query: 181 TLYLKLKETDVPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSL 240
           TLY K+KE+D+PLTALPFNEMMTLY S+GQVEKVSSIVDDLKQRMVHPDIFTYNLWISSL
Sbjct: 181 TLYEKMKESDIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSL 240

Query: 241 AAALNMDGVRQILDEMNRNPNSNEDWVRYINLANIYVTSAHLLHSESNTVVESESGITQR 300
           AAALN+DGV+QIL+EMN NPNSNE+WVRYI L NIYV SA+LLHSESN+VVES SGI+QR
Sbjct: 241 AAALNIDGVKQILNEMNHNPNSNENWVRYIELVNIYVKSANLLHSESNSVVESVSGISQR 300

Query: 301 EWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIISCYLMLDHLEEIGEVI 360
           EWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICI+SCYLMLD L+EIGEVI
Sbjct: 301 EWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGEVI 360

Query: 361 DQWKQSTSTDFDVSVCNRLVNAFVEAGFNVKANSFVNLLIQKNCNLPES 410
           DQWKQST+TDFD+S CNRLVNAF+EAG + KANSFVN+LIQKNC   E+
Sbjct: 361 DQWKQSTTTDFDISSCNRLVNAFIEAGLHEKANSFVNVLIQKNCEPTEA 409

[Close]

BLAST of Sed0018179 vs. ExPASy Swiss-Prot
Match: Q94B59 (Pentatricopeptide repeat-containing protein At5g09450, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g09450 PE=1 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 2.8e-126
Identity = 230/407 (56.51%), Postives = 305/407 (74.94%), Query Frame = 0


Query: 1   MASRSLFLTLSRKFRNRGLLSQSFQAIPVFNEAGVSNYCSRGALRSESFEESVNSEESND 60
           MA+RSLF +L  +  N G+L  +F      +    S Y +  A+ +   EE   SEE +D
Sbjct: 1   MATRSLFHSLRCRLTNNGVLGSNFIRNAESSRFSKS-YNADAAIGNSLVEE---SEEKDD 60

Query: 61  LKSRIFRLRLPKRSATNVLQRWTGEGNQVSITELRDISKELRRVQRYKHALEISEWMLTH 120
           LKSRIFRLRLPKRSAT VL++W GEGNQ++I ELR+ISKELRR +RYKHALE++EWM+ H
Sbjct: 61  LKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQH 120

Query: 121 NGLELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDSKTCETYTALLHSFAGSKLTEKAE 180
              ++SD+D+A RIDL++KVFGIDAAERYFEGL IDSKT ETYT+LLH++A SK TE+AE
Sbjct: 121 EESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAE 180

Query: 181 TLYLKLKETD-VPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISS 240
            L+ ++ E+D +   A+ +NEMMTLYMSVGQVEKV  +++ LKQ+ V PDIFTYNLW+SS
Sbjct: 181 ALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSS 240

Query: 241 LAAALNMDGVRQILDEMNRNPNSNEDWVRYINLANIYVTSAHLLHSESNTVVESESGITQ 300
            AA  N+D +R+IL+EM  + +SNE WVRYI+L +IY+ S+ + ++ES   VE+E  I+Q
Sbjct: 241 CAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQ 300

Query: 301 REWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIISCYLMLDHLEEIGEV 360
           REWITYD L+IL+ GLGNK  IDQIW+SLR T Q ++SR+YIC++S YLML HL E  E+
Sbjct: 301 REWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEI 360

Query: 361 IDQWKQSTSTDFDVSVCNRLVNAFVEAGFNVKANSFVNLLIQKNCNL 407
           I QWK+S +T+FD S C R++NAF + G    A+ F  +L+   C+L
Sbjct: 361 IHQWKESKTTEFDASACLRILNAFRDVGLEGIASGFHLILVHNKCSL 403

[Close]

BLAST of Sed0018179 vs. ExPASy Swiss-Prot
Match: Q9SY07 (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 5.7e-55
Identity = 117/360 (32.50%), Postives = 207/360 (57.50%), Query Frame = 0


Query: 51  ESVNSEES-----NDLKSRIFRLRLPKRSATNVLQRWTGEGNQVSITELRDISKELRRVQ 110
           ES N +E+     + L  R+  L   KRSA   +++W  EG+ V   EL  I +ELR+++
Sbjct: 48  ESANKKETVVGGRDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIK 107

Query: 111 RYKHALEISEWMLTHNGLELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDSKTCETYTA 170
           RYKHALEI EWM+    ++L   D+A+ +DL++K+ G+++AE++FE +P   +     T+
Sbjct: 108 RYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTS 167

Query: 171 LLHSFAGSKLTEKAETLYLKLKETDVPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRM 230
           LLHS+  +KL++KAE L+ K+ E     + LP+N M+++Y+S GQ EKV  ++ +LK R 
Sbjct: 168 LLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIR- 227

Query: 231 VHPDIFTYNLWISSLAAALNMDGVRQILDEMNRNPNSNEDWVRYINLANIYVTSAHLLHS 290
             PDI TYNLW+++ A+  +++G  ++  +  +    N DWV Y  L N+Y  + + +  
Sbjct: 228 TSPDIVTYNLWLTAFASGNDVEGAEKVYLKA-KEEKLNPDWVTYSVLTNLYAKTDN-VEK 287

Query: 291 ESNTVVESESGITQREWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIIS 350
               + E E  ++++  + Y  LI L+A LG+KD ++  W+ ++ + +KM    Y+ +IS
Sbjct: 288 ARLALKEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMIS 347

Query: 351 CYLMLDHLEEIGEVIDQWKQSTSTDFDVSVCNRLVNAFVEAGFNVKANSFVNLLIQKNCN 406
             + L   E+   + D+W +S S   D  + N ++  ++     +    F   +++K  N
Sbjct: 348 AVVKLGEFEQAKGLYDEW-ESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGIN 403

[Close]

BLAST of Sed0018179 vs. ExPASy Swiss-Prot
Match: Q9SKU6 (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.1e-50
Identity = 110/343 (32.07%), Postives = 188/343 (54.81%), Query Frame = 0


Query: 61  LKSRIFRLRLPKRSATNVLQRWTGEGNQVSITELRDISKELRRVQRYKHALEISEWMLTH 120
           L+ R+ R   P  S   VL  W  +GN V  +EL  I K LR+  R+ HAL+IS+WM  H
Sbjct: 40  LQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEH 99

Query: 121 NGLELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDSKTCETYTALLHSFAGSKLTEKAE 180
              E+S+ D AIR+DL+ KV G+  AE++FE +P++ +    Y ALL+ +A  K+  KAE
Sbjct: 100 RVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAE 159

Query: 181 TLYLKLKETDVPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSL 240
            ++ ++KE       LP+N M+ LY+  G+   V  ++ +++   V PDIFT N  + + 
Sbjct: 160 QVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAY 219

Query: 241 AAALNMDGVRQILDEMNRNPNSNEDWVRYINLANIYVTSAHLLHSESNTVVESESGI-TQ 300
           +   +++G+ + L     +   + DW  Y + AN Y+  A L       + +SE  +  Q
Sbjct: 220 SVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYI-KAGLTEKALEMLRKSEQMVNAQ 279

Query: 301 REWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIISCYLMLDHLEEIGEV 360
           +    Y++L+  Y   G K+++ ++W SL        +  YI +IS  L +D +EE+ ++
Sbjct: 280 KRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEEVEKI 339

Query: 361 IDQWKQSTSTDFDVSVCNRLVNAFVEAGFNVKANSFVNLLIQK 403
           +++W+   S  FD+ + + L+  + + G   KA   VN+L+QK
Sbjct: 340 MEEWEAGHSL-FDIRIPHLLITGYCKKGMMEKAEEVVNILVQK 379

[Close]

BLAST of Sed0018179 vs. ExPASy Swiss-Prot
Match: O22714 (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=1 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 9.5e-50
Identity = 113/301 (37.54%), Postives = 175/301 (58.14%), Query Frame = 0


Query: 93  ELRDISKELRRVQRYKHALEISEWMLTHNGLELSDSDFAIRIDLMTKVFGIDAAERYFEG 152
           E+ D  K+LR    Y  AL++SE ++   G+  + SD AI +DL+ K   I A E YF  
Sbjct: 57  EVGDTIKKLRNRGLYYPALKLSE-VMEERGMNKTVSDQAIHLDLVAKAREITAGENYFVD 116

Query: 153 LPIDSKTCETYTALLHSFAGSKLTEKAETLYLKLKETDVPLTALPFNEMMTLYMSVGQVE 212
           LP  SKT  TY +LL+ +    LTEKAE L  K+KE ++  +++ +N +MTLY   G+ E
Sbjct: 117 LPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETE 176

Query: 213 KVSSIVDDLKQRMVHPDIFTYNLWISSLAAALNMDGVRQILDEMNRNPNSNEDWVRYINL 272
           KV +++ +LK   V PD +TYN+W+ +LAA  ++ GV ++++EMNR+     DW  Y N+
Sbjct: 177 KVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNM 236

Query: 273 ANIYVTSAHLLHSESNTVVESESGITQREWITYDLLIILYAGLGNKDKIDQIWRSLRMTK 332
           A+IYV  A L       + E E   TQR++  Y  LI LY  LG   ++ +IWRSLR+  
Sbjct: 237 ASIYV-DAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAI 296

Query: 333 QKMTSRNYICIISCYLMLDHLEEIGEVIDQWKQSTSTDFDVSVCNRLVNAFVEAGFNVKA 392
            K ++  Y+ +I   + L+ L     +  +W+ + ST +D+ + N L+ A+ + G   KA
Sbjct: 297 PKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCST-YDIRIVNVLIGAYAQEGLIQKA 354

Query: 393 N 394
           N
Sbjct: 357 N 354

[Close]

BLAST of Sed0018179 vs. ExPASy Swiss-Prot
Match: Q3E911 (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX=3702 GN=At5g27460 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.7e-46
Identity = 117/349 (33.52%), Postives = 183/349 (52.44%), Query Frame = 0


Query: 59  NDLKSRIFRLRLPKRSATNVLQRWTGEGNQVSITELRDISKELRRVQRYKHALEISEWML 118
           N LK  I R   P+RS T++LQ     G+ VS++ELR ISK L R  RY  AL++ EWM 
Sbjct: 39  NSLK-EILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWME 98

Query: 119 THNGLELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDSKTC----ETYTALLHSFAGSK 178
               +E S  D A+R+DL+ K  G+   E YFE L   S +       Y  LL ++  +K
Sbjct: 99  NQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNK 158

Query: 179 LTEKAETLYLKLKETDVPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYN 238
           + ++AE L  KL      +T  PFNEMM LY + GQ EKV  +V  +K   +  ++ +YN
Sbjct: 159 MVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYN 218

Query: 239 LWISSLAAALNMDGVRQILDEMNRNPNSNEDWVRYINLANIYVTSAHLLHSESNTVVE-S 298
           LW+++      +  V  +  EM  + +    W     LAN+Y+ S      ++  V+E +
Sbjct: 219 LWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSG--FDEKARLVLEDA 278

Query: 299 ESGITQREWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIISCYLMLDHL 358
           E  + +   + Y  LI LYA LGNK+ + ++W   +    +++  NYIC++S  +    L
Sbjct: 279 EKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDL 338

Query: 359 EEIGEVIDQWKQSTSTDFDVSVCNRLVNAFVEAGFNVKANSFVNLLIQK 403
           EE   V  +W ++   ++DV V N L+ A+V  G   KA S    ++++
Sbjct: 339 EEAERVFSEW-EAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLER 383

[Close]

BLAST of Sed0018179 vs. ExPASy TrEMBL
Match: A0A6J1GLW9 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455447 PE=4 SV=1)

HSP 1 Score: 701.4 bits (1809), Expect = 2.2e-198
Identity = 352/409 (86.06%), Postives = 380/409 (92.91%), Query Frame = 0


Query: 1   MASRSLFLTLSRKFRNRGLLSQSFQAIPVFNEAGVSNYCSRGALRSESFEESVNSEESND 60
           MASRSLFL+L+RKFRNRG L+QSF+AI VFNEA VSNYCS GALRSES +ESVNSEE+ND
Sbjct: 1   MASRSLFLSLNRKFRNRGFLNQSFKAILVFNEASVSNYCSHGALRSESLDESVNSEETND 60

Query: 61  LKSRIFRLRLPKRSATNVLQRWTGEGNQVSITELRDISKELRRVQRYKHALEISEWMLTH 120
           LKSRIFRLRLPKRSA NV+QRWT EGNQV+ITELR+ISKELRR+QRYKHALEI EWM++H
Sbjct: 61  LKSRIFRLRLPKRSAINVIQRWTSEGNQVTITELRNISKELRRLQRYKHALEILEWMVSH 120

Query: 121 NGLELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDSKTCETYTALLHSFAGSKLTEKAE 180
           N  ELSDSDFAIRIDLMTKVFGIDAAERYFEGLPI++KTCETYTALLHSFAGSKLTEKAE
Sbjct: 121 NENELSDSDFAIRIDLMTKVFGIDAAERYFEGLPINAKTCETYTALLHSFAGSKLTEKAE 180

Query: 181 TLYLKLKETDVPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSL 240
           TLY K+KE+ +PLTALPFNEMMTLY SVGQVEKVSSIVDDLKQ  VHPDIFTYNLWISSL
Sbjct: 181 TLYEKMKESGIPLTALPFNEMMTLYTSVGQVEKVSSIVDDLKQSKVHPDIFTYNLWISSL 240

Query: 241 AAALNMDGVRQILDEMNRNPNSNEDWVRYINLANIYVTSAHLLHSESNTVVESESGITQR 300
           AA LN+DGVR+ILDEMNRNPNSNE WVRYINL NIY+TSAHLLHSESN+VVESESGITQR
Sbjct: 241 AATLNIDGVRRILDEMNRNPNSNEVWVRYINLVNIYITSAHLLHSESNSVVESESGITQR 300

Query: 301 EWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIISCYLMLDHLEEIGEVI 360
           EWITYDLLIILYAG+GNKDKIDQIWRSLRMT+QKMTSRNYICI+SCYLMLDHL+EIGEVI
Sbjct: 301 EWITYDLLIILYAGMGNKDKIDQIWRSLRMTRQKMTSRNYICILSCYLMLDHLKEIGEVI 360

Query: 361 DQWKQSTSTDFDVSVCNRLVNAFVEAGFNVKANSFVNLLIQKNCNLPES 410
           DQWKQS+S DFDVS CNRLVNAFVEAGF  K NSFV +L  KNC   E+
Sbjct: 361 DQWKQSSSGDFDVSACNRLVNAFVEAGFKEKGNSFVTIL--KNCEPTEA 407

[Close]

BLAST of Sed0018179 vs. ExPASy TrEMBL
Match: A0A1S3C0B7 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495377 PE=4 SV=1)

HSP 1 Score: 701.4 bits (1809), Expect = 2.2e-198
Identity = 343/405 (84.69%), Postives = 382/405 (94.32%), Query Frame = 0


Query: 1   MASRSLFLTLSRKFRNRGLLSQSFQAIPVFNEAGVSNYCSRGALRSESFEESVNSEESND 60
           MASR+LFL  SRKFRNRG L+QSF++IPVFNEA +SNYCS GALRSESF++SVNSEE ND
Sbjct: 1   MASRTLFLAFSRKFRNRGFLNQSFKSIPVFNEANISNYCSHGALRSESFDDSVNSEEFND 60

Query: 61  LKSRIFRLRLPKRSATNVLQRWTGEGNQVSITELRDISKELRRVQRYKHALEISEWMLTH 120
           LKSRIF+LRLPKRSA  VL+RWT EGNQV+ITELR+ISKELR++QRYKHALEI EWM+TH
Sbjct: 61  LKSRIFQLRLPKRSAIRVLERWTSEGNQVTITELRNISKELRKIQRYKHALEILEWMVTH 120

Query: 121 NGLELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDSKTCETYTALLHSFAGSKLTEKAE 180
           N  +LSDSDFAIRIDLMTKVFG+DAAERYFEGLPID+KTCETYTALLHSFAGSKLT+KAE
Sbjct: 121 NKSDLSDSDFAIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAE 180

Query: 181 TLYLKLKETDVPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSL 240
           TLY K+KE+D+PLTALPFNEMMTLY S+GQVEKVSSIVDDLKQ+MVHPDIFTYNLWISSL
Sbjct: 181 TLYEKIKESDIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQKMVHPDIFTYNLWISSL 240

Query: 241 AAALNMDGVRQILDEMNRNPNSNEDWVRYINLANIYVTSAHLLHSESNTVVESESGITQR 300
           AAALN+DGV+QIL+EMN+NPNSNE+WVRYI L NIY+ SA+LLHS SN+VVES SGI+QR
Sbjct: 241 AAALNIDGVKQILNEMNQNPNSNENWVRYIELVNIYIKSANLLHSGSNSVVESASGISQR 300

Query: 301 EWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIISCYLMLDHLEEIGEVI 360
           EWITYDLLIILYAGLGNKD+IDQIWRSLRMTKQKMTSRNYICI+SCYLMLD L+EIGEVI
Sbjct: 301 EWITYDLLIILYAGLGNKDRIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGEVI 360

Query: 361 DQWKQSTSTDFDVSVCNRLVNAFVEAGFNVKANSFVNLLIQKNCN 406
           DQWKQST+TDFD+S CNRLVNAFVEAG N KANSFVN+LIQKNC+
Sbjct: 361 DQWKQSTTTDFDISSCNRLVNAFVEAGLNEKANSFVNVLIQKNCD 405

[Close]

BLAST of Sed0018179 vs. ExPASy TrEMBL
Match: A0A0A0K649 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G066290 PE=4 SV=1)

HSP 1 Score: 699.5 bits (1804), Expect = 8.2e-198
Identity = 345/409 (84.35%), Postives = 380/409 (92.91%), Query Frame = 0


Query: 1   MASRSLFLTLSRKFRNRGLLSQSFQAIPVFNEAGVSNYCSRGALRSESFEESVNSEESND 60
           MASR+LFL  SRKFRNRG L+QSF++ PVFNEA VSNYCS GALRSESF+ESVN EE ND
Sbjct: 1   MASRALFLAFSRKFRNRGFLNQSFKSTPVFNEANVSNYCSHGALRSESFDESVNYEEFND 60

Query: 61  LKSRIFRLRLPKRSATNVLQRWTGEGNQVSITELRDISKELRRVQRYKHALEISEWMLTH 120
           LKSRIF+LRLPKRSA  VL+RWT EGNQV+I ELR+ISKELR++QRYKHALEI EWM++H
Sbjct: 61  LKSRIFQLRLPKRSAIRVLERWTSEGNQVTIAELRNISKELRKIQRYKHALEILEWMVSH 120

Query: 121 NGLELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDSKTCETYTALLHSFAGSKLTEKAE 180
           N  ELSDSDFAIRIDLMTKVFG+DAAERYFEGLPID+KTCETYTALLHSFAGSKLT+KAE
Sbjct: 121 NQSELSDSDFAIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAE 180

Query: 181 TLYLKLKETDVPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSL 240
           TLY K+KE+D+PLTALPFNEMMTLY S+GQVEKVSSIVDDLKQRMVHPDIFTYNLWISSL
Sbjct: 181 TLYEKMKESDIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSL 240

Query: 241 AAALNMDGVRQILDEMNRNPNSNEDWVRYINLANIYVTSAHLLHSESNTVVESESGITQR 300
           AAALN+DGV+QIL+EMN NPNSNE+WVRYI L NIYV SA+LLHSESN+VVES SGI+QR
Sbjct: 241 AAALNIDGVKQILNEMNHNPNSNENWVRYIELVNIYVKSANLLHSESNSVVESVSGISQR 300

Query: 301 EWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIISCYLMLDHLEEIGEVI 360
           EWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICI+SCYLMLD L+EIGEVI
Sbjct: 301 EWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGEVI 360

Query: 361 DQWKQSTSTDFDVSVCNRLVNAFVEAGFNVKANSFVNLLIQKNCNLPES 410
           DQWKQST+TDFD+S CNRLVNAF+EAG + KANSFVN+LIQKNC   E+
Sbjct: 361 DQWKQSTTTDFDISSCNRLVNAFIEAGLHEKANSFVNVLIQKNCEPTEA 409

[Close]

BLAST of Sed0018179 vs. ExPASy TrEMBL
Match: A0A6J1I8J2 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470636 PE=4 SV=1)

HSP 1 Score: 699.1 bits (1803), Expect = 1.1e-197
Identity = 349/409 (85.33%), Postives = 380/409 (92.91%), Query Frame = 0


Query: 1   MASRSLFLTLSRKFRNRGLLSQSFQAIPVFNEAGVSNYCSRGALRSESFEESVNSEESND 60
           MASRSLFL+L+RKFRNRG L+QSF+AIPVFNEA VSNYCS GALRSES +ESVNSEE+ND
Sbjct: 1   MASRSLFLSLNRKFRNRGFLNQSFKAIPVFNEASVSNYCSHGALRSESLDESVNSEETND 60

Query: 61  LKSRIFRLRLPKRSATNVLQRWTGEGNQVSITELRDISKELRRVQRYKHALEISEWMLTH 120
           LKSRIFRLRLPKRSA NV+QRWT EGNQV+ITELR+ISKELRR+QRYKHALEI EWM++H
Sbjct: 61  LKSRIFRLRLPKRSAINVIQRWTSEGNQVTITELRNISKELRRLQRYKHALEILEWMVSH 120

Query: 121 NGLELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDSKTCETYTALLHSFAGSKLTEKAE 180
           N  ELSDSDFAIRIDLMTKVFGIDAAERYFEGLPID+KTCETYT+LLHSF+GSKLTEKAE
Sbjct: 121 NENELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTSLLHSFSGSKLTEKAE 180

Query: 181 TLYLKLKETDVPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSL 240
           TLY K+KE+ +PLTALPFNEMMTLY SVGQVEKVSSIV+DLKQ  VH DIFTYNLWISSL
Sbjct: 181 TLYEKMKESGIPLTALPFNEMMTLYTSVGQVEKVSSIVNDLKQSKVHSDIFTYNLWISSL 240

Query: 241 AAALNMDGVRQILDEMNRNPNSNEDWVRYINLANIYVTSAHLLHSESNTVVESESGITQR 300
           AA LN+DGVRQILDEM RNPNSNE WVRYINL NIY+TSAHLLHSESN+VVESESGITQR
Sbjct: 241 AATLNIDGVRQILDEMTRNPNSNEVWVRYINLVNIYITSAHLLHSESNSVVESESGITQR 300

Query: 301 EWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIISCYLMLDHLEEIGEVI 360
           EWITYDLLIILYAG+GNKDK+D+IWRSLRMTKQKMTSRNYICI+SCYLMLDHL+EIGEVI
Sbjct: 301 EWITYDLLIILYAGMGNKDKVDEIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVI 360

Query: 361 DQWKQSTSTDFDVSVCNRLVNAFVEAGFNVKANSFVNLLIQKNCNLPES 410
           DQWKQS++ DFDVS CNRLVNAFVEAGF  KANSFV +L  KNC   E+
Sbjct: 361 DQWKQSSTGDFDVSACNRLVNAFVEAGFKEKANSFVTIL--KNCEPTEA 407

[Close]

BLAST of Sed0018179 vs. ExPASy TrEMBL
Match: A0A6J1GN52 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455447 PE=4 SV=1)

HSP 1 Score: 690.3 bits (1780), Expect = 5.0e-195
Identity = 349/409 (85.33%), Postives = 377/409 (92.18%), Query Frame = 0


Query: 1   MASRSLFLTLSRKFRNRGLLSQSFQAIPVFNEAGVSNYCSRGALRSESFEESVNSEESND 60
           MASRSLFL+L+   RNRG L+QSF+AI VFNEA VSNYCS GALRSES +ESVNSEE+ND
Sbjct: 1   MASRSLFLSLN---RNRGFLNQSFKAILVFNEASVSNYCSHGALRSESLDESVNSEETND 60

Query: 61  LKSRIFRLRLPKRSATNVLQRWTGEGNQVSITELRDISKELRRVQRYKHALEISEWMLTH 120
           LKSRIFRLRLPKRSA NV+QRWT EGNQV+ITELR+ISKELRR+QRYKHALEI EWM++H
Sbjct: 61  LKSRIFRLRLPKRSAINVIQRWTSEGNQVTITELRNISKELRRLQRYKHALEILEWMVSH 120

Query: 121 NGLELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDSKTCETYTALLHSFAGSKLTEKAE 180
           N  ELSDSDFAIRIDLMTKVFGIDAAERYFEGLPI++KTCETYTALLHSFAGSKLTEKAE
Sbjct: 121 NENELSDSDFAIRIDLMTKVFGIDAAERYFEGLPINAKTCETYTALLHSFAGSKLTEKAE 180

Query: 181 TLYLKLKETDVPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSL 240
           TLY K+KE+ +PLTALPFNEMMTLY SVGQVEKVSSIVDDLKQ  VHPDIFTYNLWISSL
Sbjct: 181 TLYEKMKESGIPLTALPFNEMMTLYTSVGQVEKVSSIVDDLKQSKVHPDIFTYNLWISSL 240

Query: 241 AAALNMDGVRQILDEMNRNPNSNEDWVRYINLANIYVTSAHLLHSESNTVVESESGITQR 300
           AA LN+DGVR+ILDEMNRNPNSNE WVRYINL NIY+TSAHLLHSESN+VVESESGITQR
Sbjct: 241 AATLNIDGVRRILDEMNRNPNSNEVWVRYINLVNIYITSAHLLHSESNSVVESESGITQR 300

Query: 301 EWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIISCYLMLDHLEEIGEVI 360
           EWITYDLLIILYAG+GNKDKIDQIWRSLRMT+QKMTSRNYICI+SCYLMLDHL+EIGEVI
Sbjct: 301 EWITYDLLIILYAGMGNKDKIDQIWRSLRMTRQKMTSRNYICILSCYLMLDHLKEIGEVI 360

Query: 361 DQWKQSTSTDFDVSVCNRLVNAFVEAGFNVKANSFVNLLIQKNCNLPES 410
           DQWKQS+S DFDVS CNRLVNAFVEAGF  K NSFV +L  KNC   E+
Sbjct: 361 DQWKQSSSGDFDVSACNRLVNAFVEAGFKEKGNSFVTIL--KNCEPTEA 404

[Close]

BLAST of Sed0018179 vs. TAIR 10
Match: AT5G09450.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 453.4 bits (1165), Expect = 2.0e-127
Identity = 230/407 (56.51%), Postives = 305/407 (74.94%), Query Frame = 0


Query: 1   MASRSLFLTLSRKFRNRGLLSQSFQAIPVFNEAGVSNYCSRGALRSESFEESVNSEESND 60
           MA+RSLF +L  +  N G+L  +F      +    S Y +  A+ +   EE   SEE +D
Sbjct: 1   MATRSLFHSLRCRLTNNGVLGSNFIRNAESSRFSKS-YNADAAIGNSLVEE---SEEKDD 60

Query: 61  LKSRIFRLRLPKRSATNVLQRWTGEGNQVSITELRDISKELRRVQRYKHALEISEWMLTH 120
           LKSRIFRLRLPKRSAT VL++W GEGNQ++I ELR+ISKELRR +RYKHALE++EWM+ H
Sbjct: 61  LKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQH 120

Query: 121 NGLELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDSKTCETYTALLHSFAGSKLTEKAE 180
              ++SD+D+A RIDL++KVFGIDAAERYFEGL IDSKT ETYT+LLH++A SK TE+AE
Sbjct: 121 EESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAE 180

Query: 181 TLYLKLKETD-VPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISS 240
            L+ ++ E+D +   A+ +NEMMTLYMSVGQVEKV  +++ LKQ+ V PDIFTYNLW+SS
Sbjct: 181 ALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSS 240

Query: 241 LAAALNMDGVRQILDEMNRNPNSNEDWVRYINLANIYVTSAHLLHSESNTVVESESGITQ 300
            AA  N+D +R+IL+EM  + +SNE WVRYI+L +IY+ S+ + ++ES   VE+E  I+Q
Sbjct: 241 CAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQ 300

Query: 301 REWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIISCYLMLDHLEEIGEV 360
           REWITYD L+IL+ GLGNK  IDQIW+SLR T Q ++SR+YIC++S YLML HL E  E+
Sbjct: 301 REWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEI 360

Query: 361 IDQWKQSTSTDFDVSVCNRLVNAFVEAGFNVKANSFVNLLIQKNCNL 407
           I QWK+S +T+FD S C R++NAF + G    A+ F  +L+   C+L
Sbjct: 361 IHQWKESKTTEFDASACLRILNAFRDVGLEGIASGFHLILVHNKCSL 403

[Close]

BLAST of Sed0018179 vs. TAIR 10
Match: AT4G02820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 216.5 bits (550), Expect = 4.1e-56
Identity = 117/360 (32.50%), Postives = 207/360 (57.50%), Query Frame = 0


Query: 51  ESVNSEES-----NDLKSRIFRLRLPKRSATNVLQRWTGEGNQVSITELRDISKELRRVQ 110
           ES N +E+     + L  R+  L   KRSA   +++W  EG+ V   EL  I +ELR+++
Sbjct: 48  ESANKKETVVGGRDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIK 107

Query: 111 RYKHALEISEWMLTHNGLELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDSKTCETYTA 170
           RYKHALEI EWM+    ++L   D+A+ +DL++K+ G+++AE++FE +P   +     T+
Sbjct: 108 RYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTS 167

Query: 171 LLHSFAGSKLTEKAETLYLKLKETDVPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRM 230
           LLHS+  +KL++KAE L+ K+ E     + LP+N M+++Y+S GQ EKV  ++ +LK R 
Sbjct: 168 LLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIR- 227

Query: 231 VHPDIFTYNLWISSLAAALNMDGVRQILDEMNRNPNSNEDWVRYINLANIYVTSAHLLHS 290
             PDI TYNLW+++ A+  +++G  ++  +  +    N DWV Y  L N+Y  + + +  
Sbjct: 228 TSPDIVTYNLWLTAFASGNDVEGAEKVYLKA-KEEKLNPDWVTYSVLTNLYAKTDN-VEK 287

Query: 291 ESNTVVESESGITQREWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIIS 350
               + E E  ++++  + Y  LI L+A LG+KD ++  W+ ++ + +KM    Y+ +IS
Sbjct: 288 ARLALKEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMIS 347

Query: 351 CYLMLDHLEEIGEVIDQWKQSTSTDFDVSVCNRLVNAFVEAGFNVKANSFVNLLIQKNCN 406
             + L   E+   + D+W +S S   D  + N ++  ++     +    F   +++K  N
Sbjct: 348 AVVKLGEFEQAKGLYDEW-ESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGIN 403

[Close]

BLAST of Sed0018179 vs. TAIR 10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 202.2 bits (513), Expect = 8.0e-52
Identity = 110/343 (32.07%), Postives = 188/343 (54.81%), Query Frame = 0


Query: 61  LKSRIFRLRLPKRSATNVLQRWTGEGNQVSITELRDISKELRRVQRYKHALEISEWMLTH 120
           L+ R+ R   P  S   VL  W  +GN V  +EL  I K LR+  R+ HAL+IS+WM  H
Sbjct: 40  LQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEH 99

Query: 121 NGLELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDSKTCETYTALLHSFAGSKLTEKAE 180
              E+S+ D AIR+DL+ KV G+  AE++FE +P++ +    Y ALL+ +A  K+  KAE
Sbjct: 100 RVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAE 159

Query: 181 TLYLKLKETDVPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSL 240
            ++ ++KE       LP+N M+ LY+  G+   V  ++ +++   V PDIFT N  + + 
Sbjct: 160 QVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAY 219

Query: 241 AAALNMDGVRQILDEMNRNPNSNEDWVRYINLANIYVTSAHLLHSESNTVVESESGI-TQ 300
           +   +++G+ + L     +   + DW  Y + AN Y+  A L       + +SE  +  Q
Sbjct: 220 SVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYI-KAGLTEKALEMLRKSEQMVNAQ 279

Query: 301 REWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIISCYLMLDHLEEIGEV 360
           +    Y++L+  Y   G K+++ ++W SL        +  YI +IS  L +D +EE+ ++
Sbjct: 280 KRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEEVEKI 339

Query: 361 IDQWKQSTSTDFDVSVCNRLVNAFVEAGFNVKANSFVNLLIQK 403
           +++W+   S  FD+ + + L+  + + G   KA   VN+L+QK
Sbjct: 340 MEEWEAGHSL-FDIRIPHLLITGYCKKGMMEKAEEVVNILVQK 379

[Close]

BLAST of Sed0018179 vs. TAIR 10
Match: AT1G60770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 199.1 bits (505), Expect = 6.7e-51
Identity = 113/301 (37.54%), Postives = 175/301 (58.14%), Query Frame = 0


Query: 93  ELRDISKELRRVQRYKHALEISEWMLTHNGLELSDSDFAIRIDLMTKVFGIDAAERYFEG 152
           E+ D  K+LR    Y  AL++SE ++   G+  + SD AI +DL+ K   I A E YF  
Sbjct: 57  EVGDTIKKLRNRGLYYPALKLSE-VMEERGMNKTVSDQAIHLDLVAKAREITAGENYFVD 116

Query: 153 LPIDSKTCETYTALLHSFAGSKLTEKAETLYLKLKETDVPLTALPFNEMMTLYMSVGQVE 212
           LP  SKT  TY +LL+ +    LTEKAE L  K+KE ++  +++ +N +MTLY   G+ E
Sbjct: 117 LPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETE 176

Query: 213 KVSSIVDDLKQRMVHPDIFTYNLWISSLAAALNMDGVRQILDEMNRNPNSNEDWVRYINL 272
           KV +++ +LK   V PD +TYN+W+ +LAA  ++ GV ++++EMNR+     DW  Y N+
Sbjct: 177 KVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNM 236

Query: 273 ANIYVTSAHLLHSESNTVVESESGITQREWITYDLLIILYAGLGNKDKIDQIWRSLRMTK 332
           A+IYV  A L       + E E   TQR++  Y  LI LY  LG   ++ +IWRSLR+  
Sbjct: 237 ASIYV-DAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAI 296

Query: 333 QKMTSRNYICIISCYLMLDHLEEIGEVIDQWKQSTSTDFDVSVCNRLVNAFVEAGFNVKA 392
            K ++  Y+ +I   + L+ L     +  +W+ + ST +D+ + N L+ A+ + G   KA
Sbjct: 297 PKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCST-YDIRIVNVLIGAYAQEGLIQKA 354

Query: 393 N 394
           N
Sbjct: 357 N 354

[Close]

BLAST of Sed0018179 vs. TAIR 10
Match: AT5G27460.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 187.2 bits (474), Expect = 2.6e-47
Identity = 117/349 (33.52%), Postives = 183/349 (52.44%), Query Frame = 0


Query: 59  NDLKSRIFRLRLPKRSATNVLQRWTGEGNQVSITELRDISKELRRVQRYKHALEISEWML 118
           N LK  I R   P+RS T++LQ     G+ VS++ELR ISK L R  RY  AL++ EWM 
Sbjct: 39  NSLK-EILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWME 98

Query: 119 THNGLELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDSKTC----ETYTALLHSFAGSK 178
               +E S  D A+R+DL+ K  G+   E YFE L   S +       Y  LL ++  +K
Sbjct: 99  NQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNK 158

Query: 179 LTEKAETLYLKLKETDVPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYN 238
           + ++AE L  KL      +T  PFNEMM LY + GQ EKV  +V  +K   +  ++ +YN
Sbjct: 159 MVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYN 218

Query: 239 LWISSLAAALNMDGVRQILDEMNRNPNSNEDWVRYINLANIYVTSAHLLHSESNTVVE-S 298
           LW+++      +  V  +  EM  + +    W     LAN+Y+ S      ++  V+E +
Sbjct: 219 LWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSG--FDEKARLVLEDA 278

Query: 299 ESGITQREWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIISCYLMLDHL 358
           E  + +   + Y  LI LYA LGNK+ + ++W   +    +++  NYIC++S  +    L
Sbjct: 279 EKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDL 338

Query: 359 EEIGEVIDQWKQSTSTDFDVSVCNRLVNAFVEAGFNVKANSFVNLLIQK 403
           EE   V  +W ++   ++DV V N L+ A+V  G   KA S    ++++
Sbjct: 339 EEAERVFSEW-EAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLER 383

The following BLAST results are available for this feature:

BLAST of Sed0018179 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888933.1	3.3e-201	86.06	pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 ...	[more]
XP_038888934.1	2.6e-198	85.57	pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X2 ...	[more]
XP_008455132.1	4.5e-198	84.69	PREDICTED: pentatricopeptide repeat-containing protein At5g09450, mitochondrial ...	[more]
XP_022952903.1	4.5e-198	86.06	pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 ...	[more]
XP_011658826.1	1.7e-197	84.35	pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 ...	[more]

BLAST of Sed0018179 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94B59	2.8e-126	56.51	Pentatricopeptide repeat-containing protein At5g09450, mitochondrial OS=Arabidop...	[more]
Q9SY07	5.7e-55	32.50	Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop...	[more]
Q9SKU6	1.1e-50	32.07	Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop...	[more]
O22714	9.5e-50	37.54	Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX...	[more]
Q3E911	3.7e-46	33.52	Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX...	[more]

BLAST of Sed0018179 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GLW9	2.2e-198	86.06	pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 ...	[more]
A0A1S3C0B7	2.2e-198	84.69	pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 ...	[more]
A0A0A0K649	8.2e-198	84.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G066290 PE=4 SV=1	[more]
A0A6J1I8J2	1.1e-197	85.33	pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 ...	[more]
A0A6J1GN52	5.0e-195	85.33	pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X2 ...	[more]

BLAST of Sed0018179 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09450.1	2.0e-127	56.51	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G02820.1	4.1e-56	32.50	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G20710.1	8.0e-52	32.07	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G60770.1	6.7e-51	37.54	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G27460.1	2.6e-47	33.52	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 46..77 e-value: 0.0018 score: 16.3
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 71..122 e-value: 1.3E-4 score: 21.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..179 e-value: 2.3E-15 score: 58.8 coord: 180..293 e-value: 4.4E-5 score: 25.1
None	No IPR available	PANTHER	PTHR45717	OS12G0527900 PROTEIN	coord: 1..291
None	No IPR available	PANTHER	PTHR45717:SF4	BNAC02G00860D PROTEIN	coord: 1..291

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018179.1	Sed0018179.1	mRNA
Sed0018179.2	Sed0018179.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding