Sed0018177 (gene) Chayote v1

Overview


Name	Sed0018177
Type	gene
Organism	Sechium edule (Chayote v1)
Description	S-protein homolog
Location	LG09: 26514937 .. 26515377 (-)
RNA-Seq Expression	Sed0018177
Synteny	Sed0018177

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAGAAATTTGTTTCTTGTCCTTGTGGGTATGACACTAGTGGCAGTTGAGCCATTATTTGTGGAAGCTGTGCCACCTGAAGTATACGTTGATAGATGGCATATTCATGTGATTAATAGGCTGAGCAATGGCCATAATTTGTATGCGCACTGCAAGTCAGGAGATACCGATGTGGGAGAACATTATATCAACCCTGGAGCTGAAATCCAATGGAGCTTTAAGGAAAATTTTATGGGATCAACTTTGTTTTGGTGCTTTTTGAAAAAACCAGGTGGCTCTGTCTCTTTTGAAGTGTTTTGGCATGAAACTAATACTTACTGGCTGCATTATAGGTGCACTCTTGAGGGAACTTGCCTTTGGATTGCCAAAGATGATGGGGTTTACTTGAAAAACATTCCTGATAATCTTGAAGATTTGATTCATAAGTGGAGCCCTTAG

mRNA sequence

ATGAATAGAAATTTGTTTCTTGTCCTTGTGGGTATGACACTAGTGGCAGTTGAGCCATTATTTGTGGAAGCTGTGCCACCTGAAGTATACGTTGATAGATGGCATATTCATGTGATTAATAGGCTGAGCAATGGCCATAATTTGTATGCGCACTGCAAGTCAGGAGATACCGATGTGGGAGAACATTATATCAACCCTGGAGCTGAAATCCAATGGAGCTTTAAGGAAAATTTTATGGGATCAACTTTGTTTTGGTGCTTTTTGAAAAAACCAGGTGGCTCTGTCTCTTTTGAAGTGTTTTGGCATGAAACTAATACTTACTGGCTGCATTATAGGTGCACTCTTGAGGGAACTTGCCTTTGGATTGCCAAAGATGATGGGGTTTACTTGAAAAACATTCCTGATAATCTTGAAGATTTGATTCATAAGTGGAGCCCTTAG

Coding sequence (CDS)

ATGAATAGAAATTTGTTTCTTGTCCTTGTGGGTATGACACTAGTGGCAGTTGAGCCATTATTTGTGGAAGCTGTGCCACCTGAAGTATACGTTGATAGATGGCATATTCATGTGATTAATAGGCTGAGCAATGGCCATAATTTGTATGCGCACTGCAAGTCAGGAGATACCGATGTGGGAGAACATTATATCAACCCTGGAGCTGAAATCCAATGGAGCTTTAAGGAAAATTTTATGGGATCAACTTTGTTTTGGTGCTTTTTGAAAAAACCAGGTGGCTCTGTCTCTTTTGAAGTGTTTTGGCATGAAACTAATACTTACTGGCTGCATTATAGGTGCACTCTTGAGGGAACTTGCCTTTGGATTGCCAAAGATGATGGGGTTTACTTGAAAAACATTCCTGATAATCTTGAAGATTTGATTCATAAGTGGAGCCCTTAG

Protein sequence

MNRNLFLVLVGMTLVAVEPLFVEAVPPEVYVDRWHIHVINRLSNGHNLYAHCKSGDTDVGEHYINPGAEIQWSFKENFMGSTLFWCFLKKPGGSVSFEVFWHETNTYWLHYRCTLEGTCLWIAKDDGVYLKNIPDNLEDLIHKWSP

Homology

[Close]

BLAST of Sed0018177 vs. NCBI nr
Match: XP_022143724.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 218.8 bits (556), Expect = 3.1e-53
Identity = 93/145 (64.14%), Postives = 115/145 (79.31%), Query Frame = 0


Query: 1   MNRNLFLVLVGMTLVAVEPLFVEAVPPEVYVDRWHIHVINRLSNGHNLYAHCKSGDTDVG 60
           M  N+ L+ V   L   +P FVEA+ P  YVD+WH+HV+N LSN   L+AHCKS DTD+G
Sbjct: 1   MGANVVLLAVLAALTVAQP-FVEALAPTPYVDKWHVHVVNGLSNA-TLFAHCKSRDTDLG 60

Query: 61  EHYINPGAEIQWSFKENFMGSTLFWCFLKKPGGSVSFEVFWHETNTYWLHYRCTLEGTCL 120
           EH +N GAEIQWSFKEN  G+TLFWCFLKKPGGS SF+VFW E +  WLHYRCT +GTC+
Sbjct: 61  EHNLNRGAEIQWSFKENVWGTTLFWCFLKKPGGSASFDVFWREVDHLWLHYRCTNDGTCI 120

Query: 121 WIAKDDGVYLKNIPDNLEDLIHKWS 146
           W AKDDG+Y++NIPDNL++L+HKW+
Sbjct: 121 WTAKDDGIYIRNIPDNLDELVHKWT 143

[Close]

BLAST of Sed0018177 vs. NCBI nr
Match: XP_038896414.1 (S-protein homolog 1-like [Benincasa hispida])

HSP 1 Score: 211.5 bits (537), Expect = 5.0e-51
Identity = 95/149 (63.76%), Postives = 114/149 (76.51%), Query Frame = 0


Query: 1   MNRNLFLVLVGMT----LVAVEPLFVEAVPPEVYVDRWHIHVINRLSNGHNLYAHCKSGD 60
           M RNL  ++V M+    +V  + +FV AV P  +VD+WH+HVIN LSNG  L+ HCKS D
Sbjct: 1   MGRNLSYLVVLMSVLFMVVHQQHVFVGAVLPPAFVDKWHVHVINGLSNG-KLFVHCKSRD 60

Query: 61  TDVGEHYINPGAEIQWSFKENFMGSTLFWCFLKKPGGS-VSFEVFWHETNTYWLHYRCTL 120
           TD+GE YIN GAEIQWSFKEN  G+TLFWCF+K P GS  SFEVFWHE   YWLHYRCTL
Sbjct: 61  TDIGEQYINHGAEIQWSFKENVWGTTLFWCFVKNPNGSFASFEVFWHEAQHYWLHYRCTL 120

Query: 121 EGTCLWIAKDDGVYLKNIPDNLEDLIHKW 145
           +GTC W AKDDG+YL+NIPD +E+ IH+W
Sbjct: 121 QGTCFWTAKDDGIYLRNIPDGIEEKIHEW 148

[Close]

BLAST of Sed0018177 vs. NCBI nr
Match: KAE8646235.1 (hypothetical protein Csa_015792, partial [Cucumis sativus])

HSP 1 Score: 200.3 bits (508), Expect = 1.2e-47
Identity = 88/126 (69.84%), Postives = 103/126 (81.75%), Query Frame = 0


Query: 21  FVEAVPPEVYVDRWHIHVINRLSNGHNLYAHCKSGDTDVGEHYINPGAEIQWSFKENFMG 80
           FV AV P   V++WHIHVIN LSNG  L AHCKS DTD+GE YI+ G+EIQWSFKEN  G
Sbjct: 4   FVGAVLPPAIVNKWHIHVINGLSNG-KLMAHCKSRDTDIGEQYIDHGSEIQWSFKENVFG 63

Query: 81  STLFWCFLKKPGGSV-SFEVFWHETNTYWLHYRCTL-EGTCLWIAKDDGVYLKNIPDNLE 140
           STLFWCF++ P GS  SFEVFWHET  YWLHYRCTL +GTC WIAKDDG+YL+NIPD+++
Sbjct: 64  STLFWCFMRTPNGSFSSFEVFWHETQHYWLHYRCTLDQGTCYWIAKDDGIYLRNIPDSID 123

Query: 141 DLIHKW 145
           + IH+W
Sbjct: 124 EKIHEW 128

[Close]

BLAST of Sed0018177 vs. NCBI nr
Match: XP_022148919.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 160.6 bits (405), Expect = 1.0e-35
Identity = 74/146 (50.68%), Postives = 99/146 (67.81%), Query Frame = 0


Query: 5   LFLVLVGMTLVAVEPLFVEA------VPPEVYVDRWHIHVINRLSNGHNLYAHCKSGDTD 64
           L LVL  + +VA + +  +       +P +     WHIHV+N LS   +L+ HCKS D D
Sbjct: 37  LLLVLASLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSK-DSLFVHCKSKDND 96

Query: 65  VGEHYINPGAEIQWSFKENFMGSTLFWCFLKKPGGSVSFEVFWHETNTYWLHYRCTLEGT 124
           VG H +  G EIQWSF EN  G+TLFWCFL+KPG + SF+VFW E+   WLH+RC +  T
Sbjct: 97  VGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASFDVFWVESRHNWLHHRCAIL-T 156

Query: 125 CLWIAKDDGVYLKNIPDNLEDLIHKW 145
           C+WIAKDDG+YL+N  D++++LIHKW
Sbjct: 157 CIWIAKDDGIYLRNNSDHIDELIHKW 180

[Close]

BLAST of Sed0018177 vs. NCBI nr
Match: XP_038896407.1 (S-protein homolog 1-like [Benincasa hispida])

HSP 1 Score: 156.8 bits (395), Expect = 1.5e-34
Identity = 67/139 (48.20%), Postives = 92/139 (66.19%), Query Frame = 0


Query: 7   LVLVGMTLVAVEPLFVEAVPPEVYVDRWHIHVINRLSNGHNLYAHCKSGDTDVG-EHYIN 66
           LVL+G+ L+    LF +  P  + + +WH+HV+N L N   L+ HCKS D D+G +H ++
Sbjct: 12  LVLLGLVLIQQPLLFAKGDPVPLPLQKWHVHVVNGLKNA-TLFVHCKSKDDDLGPQHLVS 71

Query: 67  PGAEIQWSFKENFMGSTLFWCFLKKPGGSVSFEVFWHETNTYWLHYRCTLEGTCLWIAKD 126
            GAE QWSFK N   +TL+WC L KP   VSF+ FW E    WLHYRC +   C W+AKD
Sbjct: 72  NGAEFQWSFKINIWRTTLYWCSLHKPNADVSFDAFWVERRHIWLHYRC-MNQNCFWMAKD 131

Query: 127 DGVYLKNIPDNLEDLIHKW 145
           DG+YL+N PD +++ +HKW
Sbjct: 132 DGIYLRNNPDAVDEFVHKW 148

[Close]

BLAST of Sed0018177 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.4e-19
Identity = 42/114 (36.84%), Postives = 62/114 (54.39%), Query Frame = 0


Query: 31  VDRWHIHVINRLSNGHNLYAHCKSGDTDVGEHYINPGAEIQWSFKENFMGSTLFWCFLKK 90
           +  W + V+N L+ G  L+ HCKS + D+GE  +       W+F EN + ST FWC++ K
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 91  PGGSVSFEVFWHETNTYWLHYRCTLEGTCLWIAKDDGVYLKNIPDNLEDLIHKW 145
             G ++  VFW +     L +RC  +  C+W AK DG+YL N     + L  KW
Sbjct: 98  DNGHMNVNVFWDDV---ILFHRCGWK-NCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of Sed0018177 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 5.3e-19
Identity = 42/114 (36.84%), Postives = 64/114 (56.14%), Query Frame = 0


Query: 31  VDRWHIHVINRLSNGHNLYAHCKSGDTDVGEHYINPGAEIQWSFKENFMGSTLFWCFLKK 90
           +  W + V N L+ G  L+ HCKS + D+G+  +       W+F EN + STLFWC++ K
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 91  PGGSVSFEVFWHETNTYWLHYRCTLEGTCLWIAKDDGVYLKNIPDNLEDLIHKW 145
             G ++ +VFW +     L +RC  +  C+W AK+DG+YL N     + L  KW
Sbjct: 98  DDGHMNVKVFWDDV---ILFHRCDWK-NCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of Sed0018177 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.0e-11
Identity = 30/110 (27.27%), Postives = 54/110 (49.09%), Query Frame = 0


Query: 36  IHVINRLSNGHNLYAHCKSGDTDVGEHYINPGAEIQWSFKENFMGSTLFWCFLKKPGGSV 95
           + + NRL +G  L  HCKS D D+G   + P     + F+ + +G+TLF+C    PG S 
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSK 98

Query: 96  SFEVFWHETNTYWLHYRCTLEGTCLWIAKDDGVYLKNIPDNLEDLIHKWS 146
            F+++  + +    H  C     C+W     G  + +  D+  ++ + W+
Sbjct: 99  RFDIYDDDRDGVRSHISCI---NCIWDISIQGPCMFSESDHAFNICYDWN 145

[Close]

BLAST of Sed0018177 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.9e-09
Identity = 42/139 (30.22%), Postives = 70/139 (50.36%), Query Frame = 0


Query: 2   NRNLFLVLVGMTLVAVEPLFVEAVPPEVYVDRWHIHVINRLS--NGHNLYAHCKSGDTDV 61
           N ++FL +VG+ +++           +VY  +  I V N L+  N + L  HCKS + D+
Sbjct: 3   NLSIFLFVVGLCMIS-----------DVYGKKSTITVKNELNPKNKNILKVHCKSKNNDI 62

Query: 62  GEHYINPGAEIQWSFKENFMGSTLFWCFL------KKPGGSVSFE---VFWHETNTYWLH 121
           G  Y+  G  + +SFK NF G+T FWC L      K+  G  +++   +F  + ++Y   
Sbjct: 63  GVKYLKIGEVMSFSFKTNFWGTTEFWCNLYKGPDYKRYRGITAYQAIGLFAKDGSSY--- 118

Query: 122 YRCTLEGTCLWIAKDDGVY 130
                     W+A+DDG+Y
Sbjct: 123 ---------NWLARDDGIY 118

[Close]

BLAST of Sed0018177 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-08
Identity = 32/110 (29.09%), Postives = 51/110 (46.36%), Query Frame = 0


Query: 36  IHVINRLSNGHNLYAHCKSGDTDVGEHYINPGAEIQWSFKENFMGSTLFWCFLKKPGGSV 95
           + + N L N   L  HCKS D D+G   + PG    +SF   F G TL++C    P  S 
Sbjct: 50  VEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESH 109

Query: 96  SFEVFWHETNTYWLHYRCTLEGTCLWIAKDDGVYLKNIPDNLEDLIHKWS 146
           SF+++    ++     +C  +  C+W  + +G    N      DL + W+
Sbjct: 110 SFDIYKDHRDSGG-DNKCESD-RCVWKIRRNGPCRFNDETKQFDLCYPWN 157

[Close]

BLAST of Sed0018177 vs. ExPASy TrEMBL
Match: A0A6J1CQ65 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013561 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.5e-53
Identity = 93/145 (64.14%), Postives = 115/145 (79.31%), Query Frame = 0


Query: 1   MNRNLFLVLVGMTLVAVEPLFVEAVPPEVYVDRWHIHVINRLSNGHNLYAHCKSGDTDVG 60
           M  N+ L+ V   L   +P FVEA+ P  YVD+WH+HV+N LSN   L+AHCKS DTD+G
Sbjct: 1   MGANVVLLAVLAALTVAQP-FVEALAPTPYVDKWHVHVVNGLSNA-TLFAHCKSRDTDLG 60

Query: 61  EHYINPGAEIQWSFKENFMGSTLFWCFLKKPGGSVSFEVFWHETNTYWLHYRCTLEGTCL 120
           EH +N GAEIQWSFKEN  G+TLFWCFLKKPGGS SF+VFW E +  WLHYRCT +GTC+
Sbjct: 61  EHNLNRGAEIQWSFKENVWGTTLFWCFLKKPGGSASFDVFWREVDHLWLHYRCTNDGTCI 120

Query: 121 WIAKDDGVYLKNIPDNLEDLIHKWS 146
           W AKDDG+Y++NIPDNL++L+HKW+
Sbjct: 121 WTAKDDGIYIRNIPDNLDELVHKWT 143

[Close]

BLAST of Sed0018177 vs. ExPASy TrEMBL
Match: A0A6J1D5G6 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111017469 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 4.9e-36
Identity = 74/146 (50.68%), Postives = 99/146 (67.81%), Query Frame = 0


Query: 5   LFLVLVGMTLVAVEPLFVEA------VPPEVYVDRWHIHVINRLSNGHNLYAHCKSGDTD 64
           L LVL  + +VA + +  +       +P +     WHIHV+N LS   +L+ HCKS D D
Sbjct: 37  LLLVLASLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSK-DSLFVHCKSKDND 96

Query: 65  VGEHYINPGAEIQWSFKENFMGSTLFWCFLKKPGGSVSFEVFWHETNTYWLHYRCTLEGT 124
           VG H +  G EIQWSF EN  G+TLFWCFL+KPG + SF+VFW E+   WLH+RC +  T
Sbjct: 97  VGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASFDVFWVESRHNWLHHRCAIL-T 156

Query: 125 CLWIAKDDGVYLKNIPDNLEDLIHKW 145
           C+WIAKDDG+YL+N  D++++LIHKW
Sbjct: 157 CIWIAKDDGIYLRNNSDHIDELIHKW 180

[Close]

BLAST of Sed0018177 vs. ExPASy TrEMBL
Match: A0A6J1DPJ1 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111022329 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.7e-34
Identity = 69/142 (48.59%), Postives = 98/142 (69.01%), Query Frame = 0


Query: 5   LFLVLVGMTLVAVEPLFVEAVPPEVYVDRWHIHVINRLSNGHNLYAHCKSGDTDVGEHY- 64
           + L++  + LV V P  V A+   + +D+W+IHV+N LSN   L+ HCKS D D+G H+ 
Sbjct: 1   MVLLVFWVVLVVVRP-GVVALHLPMPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHL 60

Query: 65  INPGAEIQWSFKENFMGSTLFWCFLKKPGGSVSFEVFWHETNTYWLHYRCTLEGTCLWIA 124
           I  G E+QW+F+ NF  +TL+WCF+ KP   VSF+ FW E    WL YRC  +G C+W A
Sbjct: 61  IGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEKTHIWLTYRCK-DGICIWTA 120

Query: 125 KDDGVYLKNIPDNLEDLIHKWS 146
           KDDG+YL+NIP+N ++L+HKW+
Sbjct: 121 KDDGIYLRNIPNNDDELVHKWN 140

[Close]

BLAST of Sed0018177 vs. ExPASy TrEMBL
Match: A0A6J1CQI8 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013653 PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 3.5e-34
Identity = 73/140 (52.14%), Postives = 89/140 (63.57%), Query Frame = 0


Query: 7   LVLVGMTLVAVEPLFVEAVPPEVYVDRWHIHVINRLSNGHNLYAHCKSGDTDVGEHYINP 66
           L+LV   LV  +       P  +   RWH+HV+N L+N   L  HCKS D D+G   +  
Sbjct: 14  LLLVSAALVGAQTK-PSGSPSLLVTQRWHVHVVNNLNNNF-LDVHCKSKDDDLGYQRLVR 73

Query: 67  GAEIQWSFKENFMGSTLFWCFLKKPGGSVSFEVFWHETNTYWLHYRC--TLEGTCLWIAK 126
           GA+ QWSFK NF G+TLFWC L KPG  V+FEVFW E+   WL  RC    EG C+W AK
Sbjct: 74  GADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESRNAWLRNRCHNGTEGHCIWTAK 133

Query: 127 DDGVYLKNIPDNLEDLIHKW 145
           DDG+YL+NIP N E+LIHKW
Sbjct: 134 DDGIYLRNIPTNSEELIHKW 151

[Close]

BLAST of Sed0018177 vs. ExPASy TrEMBL
Match: A0A314XMI1 (S-protein homolog OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_22176 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.0e-33
Identity = 60/113 (53.10%), Postives = 80/113 (70.80%), Query Frame = 0


Query: 32  DRWHIHVINRLSNGHNLYAHCKSGDTDVGEHYINPGAEIQWSFKENFMGSTLFWCFLKKP 91
           DRWH+HV+N LS G  L+AHCKS D D+GE  + PG E  WSFKE+F GSTL+WC++   
Sbjct: 37  DRWHVHVVNNLSAGKTLFAHCKSKDDDLGERNLAPGTEFNWSFKEHFFGSTLYWCYMSTG 96

Query: 92  GGSVSFEVFWHETNTYWLHYRCTLEGTCLWIAKDDGVYLKNIPDNLEDLIHKW 145
               + +VFW E++  WL YRC  +  C+WIAKDDG+Y+K IP+N ++  HKW
Sbjct: 97  QKHAALDVFWVESDHSWLQYRCNWK-DCIWIAKDDGIYIKIIPENRDEFSHKW 148

[Close]

BLAST of Sed0018177 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 97.4 bits (241), Expect = 9.8e-21
Identity = 42/114 (36.84%), Postives = 62/114 (54.39%), Query Frame = 0


Query: 31  VDRWHIHVINRLSNGHNLYAHCKSGDTDVGEHYINPGAEIQWSFKENFMGSTLFWCFLKK 90
           +  W + V+N L+ G  L+ HCKS + D+GE  +       W+F EN + ST FWC++ K
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 91  PGGSVSFEVFWHETNTYWLHYRCTLEGTCLWIAKDDGVYLKNIPDNLEDLIHKW 145
             G ++  VFW +     L +RC  +  C+W AK DG+YL N     + L  KW
Sbjct: 98  DNGHMNVNVFWDDV---ILFHRCGWK-NCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of Sed0018177 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 95.5 bits (236), Expect = 3.7e-20
Identity = 42/114 (36.84%), Postives = 64/114 (56.14%), Query Frame = 0


Query: 31  VDRWHIHVINRLSNGHNLYAHCKSGDTDVGEHYINPGAEIQWSFKENFMGSTLFWCFLKK 90
           +  W + V N L+ G  L+ HCKS + D+G+  +       W+F EN + STLFWC++ K
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 91  PGGSVSFEVFWHETNTYWLHYRCTLEGTCLWIAKDDGVYLKNIPDNLEDLIHKW 145
             G ++ +VFW +     L +RC  +  C+W AK+DG+YL N     + L  KW
Sbjct: 98  DDGHMNVKVFWDDV---ILFHRCDWK-NCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of Sed0018177 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 68.2 bits (165), Expect = 6.4e-12
Identity = 30/110 (27.27%), Postives = 54/110 (49.09%), Query Frame = 0


Query: 36  IHVINRLSNGHNLYAHCKSGDTDVGEHYINPGAEIQWSFKENFMGSTLFWCFLKKPGGSV 95
           + + NRL +G  L  HCKS D D+G   + P     + F+ + +G+TLF+C    PG S 
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSK 98

Query: 96  SFEVFWHETNTYWLHYRCTLEGTCLWIAKDDGVYLKNIPDNLEDLIHKWS 146
            F+++  + +    H  C     C+W     G  + +  D+  ++ + W+
Sbjct: 99  RFDIYDDDRDGVRSHISCI---NCIWDISIQGPCMFSESDHAFNICYDWN 145

[Close]

BLAST of Sed0018177 vs. TAIR 10
Match: AT1G28305.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 66.6 bits (161), Expect = 1.9e-11
Identity = 33/114 (28.95%), Postives = 54/114 (47.37%), Query Frame = 0


Query: 36  IHVINRLSNGH---NLYAHCKSGDTDVGEHYINPGAEIQWSFKENFMGSTLFWCFLKKPG 95
           +H+ N L       +L+  CKSG  D+G+HY+  G   Q+  ++NF  +TLFWC  +   
Sbjct: 26  LHIWNDLDPNQKHSDLFVQCKSGKADMGKHYVKYGKIYQFDIRDNFWKTTLFWCTFRHGP 85

Query: 96  GSVSFEVFWHETNTYWLHYRCTLEGTCLWIAKDDGVYLKNIPDNLEDLIHKWSP 147
              + + F    + Y         GT  W A++DG+Y + +       +H W P
Sbjct: 86  DYRTGQQF----DVYEYKPGVAQGGTYEWTAREDGIYFR-LNQGTIHKVHNWKP 134

[Close]

BLAST of Sed0018177 vs. TAIR 10
Match: AT1G11765.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 63.5 bits (153), Expect = 1.6e-10
Identity = 33/90 (36.67%), Postives = 50/90 (55.56%), Query Frame = 0


Query: 40  NRLSNGHNLYAHCKSGDTDVGEHYINPGAEIQWSFKENFMGSTLFWCFLKKPGGSVSFEV 99
           N LS+   L   CKSGD DV E Y+ PG +  +SF ++ MG TLFWC + K      ++V
Sbjct: 37  NSLSHNKWLKVRCKSGDNDVRERYMKPGEDWGFSFHDDVMGETLFWCTMYK---GADYKV 96

Query: 100 FWHETNTYWLHYRCTLEGTCLWIAKDDGVY 130
              + + Y    R    G+  ++A++DG+Y
Sbjct: 97  -QKKFDAYVQDKRMPHGGSYNYVAQEDGIY 122

The following BLAST results are available for this feature:

BLAST of Sed0018177 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143724.1	3.1e-53	64.14	S-protein homolog 1-like [Momordica charantia]	[more]
XP_038896414.1	5.0e-51	63.76	S-protein homolog 1-like [Benincasa hispida]	[more]
KAE8646235.1	1.2e-47	69.84	hypothetical protein Csa_015792, partial [Cucumis sativus]	[more]
XP_022148919.1	1.0e-35	50.68	S-protein homolog 1-like [Momordica charantia]	[more]
XP_038896407.1	1.5e-34	48.20	S-protein homolog 1-like [Benincasa hispida]	[more]

BLAST of Sed0018177 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	1.4e-19	36.84	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	5.3e-19	36.84	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
Q9FMQ4	9.0e-11	27.27	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]
Q9LW22	2.9e-09	30.22	S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1	[more]
F4JLQ5	1.9e-08	29.09	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]

BLAST of Sed0018177 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQ65	1.5e-53	64.14	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013561 PE=3 SV=1	[more]
A0A6J1D5G6	4.9e-36	50.68	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111017469 PE=3 SV=1	[more]
A0A6J1DPJ1	2.7e-34	48.59	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111022329 PE=3 SV=1	[more]
A0A6J1CQI8	3.5e-34	52.14	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013653 PE=3 SV=1	[more]
A0A314XMI1	1.0e-33	53.10	S-protein homolog OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_22176 PE=...	[more]

BLAST of Sed0018177 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	9.8e-21	36.84	S-protein homologue 1	[more]
AT4G29035.1	3.7e-20	36.84	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	6.4e-12	27.27	Plant self-incompatibility protein S1 family	[more]
AT1G28305.1	1.9e-11	28.95	Plant self-incompatibility protein S1 family	[more]
AT1G11765.1	1.6e-10	36.67	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 35..144 e-value: 5.9E-26 score: 91.0
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 29..130
None	No IPR available	PANTHER	PTHR31232:SF34	PUTATIVE-RELATED	coord: 29..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018177.1	Sed0018177.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region