Sed0018166 (gene) Chayote v1

Overview


Name	Sed0018166
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Nuclear transcription factor Y subunit
Location	LG10: 395553 .. 407081 (+)
RNA-Seq Expression	Sed0018166
Synteny	Sed0018166

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGTTTGTGGATTCCGAGCTTCCATTGTCTCCTCTCTTCAATCTAAAATTTCACCAAAAAACTGCAACAAAATTCATAGTCCTCAACTGCAAAAGACGATCGACGAATCAAGGGGGTGAGAATTTACCAAACCCCTTTCCAGAATTCCCAATTTCCAGGTGAAGTTCCCGTTTCCAAAACCCTACTTTTTCTTCAATCCTTCATGTCGATTTCTTCCTTTTCATCATCTCGTTTCGAATTCGGAGTATGTAGATTTGGTGGGTGATTTGGGATTTTTAGGGAGTTTTTTTGTTATTTTTTGAAATTGGATGATATTGTGTTTGTTTTGATTGAATTGCTTGGAGTTAGTTGTGGGATTATGATAGTACGGGCTGAAGTGATTGTTCTTGCGTTTAGTGATCGTATCTGGATTTTGATTTGTTGGGTAATCACTACCCAGAAACCAGAAGTTATTATTGGAGTACTGAGATGGCTGTGAAATGTCTGGTAAAATGGGGACAAATTGCATTTCTCACGCTATGTACGTCAATCTCTCTTATCTGATCGGTGTTTGCTTACCTTGTCGACCACTAAAGGATGGAAGCTAATAATTTTAGGCTTTGTGGACTTACTGCATGATATTTACCAATTATTTAGTTTGATCTTGTGTTGGATTGATTTTATATGCTTTTATGTTTTGCATCTGCTATTAGTTGCTAATGGCTGTTGTTAAAACAAGGAAAACTCAAACCCAGTTGGTTTTTGGCGTCACTGGTTTTTTCTCTTTTTGATACCGTGGATGTGTCATATGAAGGTTACTGGTTTTGTCATCGTTCATGCCTTTTAATTTAAATTTTTATAAATTAAAAAATAATTTAATTGAATAAATGAAGTTATAAAAGAGTGAGGGAAGCTAATCCTGAGGATGACAAAAAAGTTCTTCCATATGTCACAAGGAAAACTTAAGTTCCCAAAGAGGTAAACAAGAGGATCCTAAATGTTGTTGAAGAATTTCTCTCTGTCGATGAAGAGTCTGCTGTTCCTTTTAAGCCAAAGAAATTTGGCCCCGAAGGGTCTTATTCTTTTTGTCAAAGGGACGGCCCTCTGCTTCCACCATCCATGACTTCCCAAATTAAGTTTCAAATGAGCTGTTCTAATTTCAATGGAATTTGATCTAACATTTCAAAAATTGAGAAATAATACAAAGGAATATCTGATCAAAATGGGACACAAAAGTCAAACGACCTCCACGAGATAAATTAAAAAAATTTCATCTATCCATATTTGTCTCAAATCTTTCATCACTGGCTGCCAAAAAGAATTGGCTTTCAGATGGCCTCCTAGAAGTAGACCACGACCAAGATAAATTAATGGGTAGTATTCCACTTTACAACCAAATTTCTCAATTGCAGTTTTCTTTTCCTCGATATTTGCTAGGCCGTTTACATGCATCTTGAGATTAGCTTGTGAGATTAGTAAATATGCACATAAGTTAGCCATACACCCATAATTAGGAATGAAAATTGATGTTATAAAATTCATTTCACCAATAATAAACTAGCAAGTACTTGAGAATATTGCTTAACCTCAGATATTTTGAGTTTCTTTTGGATATTAGTCTAGCTGTGCAATGGCATTAAATAGGGATGTCTTTTGTATACATGTGATTTGTTGGAGTTAGTTTCAAAACAAAATCACTAGATCCTTGTCATATTATTCTTCGCACCAATTCCATCGCATTGCAAACCATCCCATTATCATTAAGCTGATATATTTGTTGGCTTTGATGTCAGGTTTCACGTGGTGTGCACTACGACCCAATGACTTCTTCTGTCCATGATTATTCTGGTACTTTATCAGACTCGTATTCCTACGTTAGGGTGTTTATTTTTACATTCCAGTGTATAGTTTTATATATCACTCTCTGAGAAAGAGAGAGAACAGTGCCTTTTCTGCCCTTAGCTCTCTACAGTTACTCAGTTACTTTGGCGATAAATGCTCTTTGCACAATCTCAATGAGCATCTTGCTGTAATTTGATTCTCGATCTTTTGGAAACAGAACGGATGTGTTTTGCTTTCTTTCTTCCTGGATCTTCTACCAAGAAATAATGATTCCCAAGGATATTTTTGGTCAATACTTCATGTGACCTACTCTTCATTATGACTCATGTATTGCATGTTATCTTTTTAATAGGAAAATAGAACTTCCATTGAAAAGTCAATCATACAAAAAAGAAAAAAAGAGGGGAGGTAGATGTTCACCTATTGACCACTGTTGAAGAGATAAGAGTAATTACAGACACCTTTTGAGGGTACTCCAAAAGGAAGACTTTTTTAGGGTACTCCAAAAGGAACACTTTTTCTAGAGTACTCCACAAGAAGGTAGGAAATGTAATTTAAGTCCCGAAGTTCTATTTTGGAAAATAGTAAGGTATTACTTTTATTTTTCAACTCCAACATTCTAAATTAAGCATTGATCCTCAATGTGTGGCTCTCTCAAACAAAAGGATGACTGCACAGCATCTAAACAAGAACTCATCAAATTTCTTGGGAGGAAAATATAATGTTAAAGAAATTGAAAAGACTCCACTAACCTTGAGTCAAGGAACTTATGCTTAGCATCTTCATTTGTACCCTTGCACATACTGAATCACCCATTGGATGGAGAGGAATCTAATTCCTTTCCTGAATGTTTTCATTAATGTTTACCATCCCAAAAAGAAGATTACCCACCTTTTCGAAGTCGGATCATGAAGTCAATTTAGCAAGATGATATCAAAATTAAGATTTCTACAAGAAAAGCCATAGCCACCTGATTGATCTATCTTTCAGCTTGAGTGTTATTGGCTAAAGCCTTTCAAACCACCTTATTTGAAGTGCATCAAGGCCATTGACTATGAGCATTTCGTGGCTCAATAGAGCTCACTGGGCTCTATTGATTGCTTTGTGACATTTTGATATTATCTTTTTTACTCTAAATGGACCTAAATAAATATTGCTTTGGAACTGGTTGTTCAGATAATCGTGAGGCTGATGAGCAGCAAAAGTACACTGAATCTCAGAATCATTCTTCGTCAGTCATAAATGGACTAAATCAACCAAGTGTCACAACCCCAAATCAGTATTTAACACCTCGACAAGCTGGAGCAGGACATGCTTTGGTACTCTATTCAAACTTCTCTCTCTCTCTCTCTCTCTCTCTCGTTAATCCCTTTGTGAAATTTGGTTTGTAAGTCCTTTGTTCGAGGCCATTTTAATTTTTTTTGATTTGGTTATTTATTCATATGTTTTTTTATGAAGAAACAAACTTTTTATAGATACAATAAATAGTTACGAGCAGGTAATAAAGAGAAGCGTCCCAGGATACACAAAGATATGGTTTGCCAAATCAACATGGAATTTATTGTGCTTTTTTTAACGACATTGTCTTATGTTTTTGGTAAAATGAAAAATAGCCATGCATCTGATGTTAATCTCCATCACTACTAGTTATATAAGGATGGACTGTTGATAGAAATTATATTTTTTGCCTTTAGTCCACCTATTTAATGCATTATATTACCTTATGTTTTAGTCACTTCCCAATGGAAACTGTTGCCTTTCATTTACCCTAATATGAACATAATATGATATGTTTTAGTCACAATGACCTTGCATTTCTGGTCTCCATCCGTGGGAAACAAATGCTGGTGAGATTGAGATTTGTGTTTTTTTTTTTACCATGACATGGTTAGGACAGTAGCTTATTTTAATTGGACAATTGCAGTTATGATGGCATTTTTCTAAATCGTTCCCTTTTGCTAGGCAATTTGCTAGACTAAGAATCTGGTTTTTACTAATTCGTTGGCAATGGCTTTTTCAAAGCTTATTTGACTAATTTGGATGTCTGGGGTTTCTCTGCTGAAGGCACCCCCTGCCTTTCCATATCCAGATCCTTATTACAGAAGCATCTTTTCTCCTTATGATGCTCAACCGTATCCTCCCCAGCCCTATGGTGGGCAACCTATGGTAAGTAGTTTATTCTTTTTCAACAACGTTGATACCTTTCGCCATCATTTTTCATAGAGTATCAAGTCGATGAGTTTGTTGGTGAGAATTGATTGTGGAATAGTAGCTCTTCCCCTCCTTTGGAGAGGGTTGAAATTTTCCATTTGTTAAATTTTTGGTAACTCTCTAAACATGGTTCCAGAAAACCAAACTGTACTCTGGGTCAGTTAAGTTGGCACCAGAGCTAATATTCTACGGTGTCCAAGAGGTGCCCATTATTTTGTCTTCCAAGTTTTTGGTGGCTTCGTACTGGAAAATTGATTTCCTTGAGCAGGAAAACTAACGGAATTTCACAATTTTAATTATTAAGTTAACAGTAGACTGGTAAAAGAATGATGCCCCCACCCCCTCAAATGATAGAATCAACATTCAGGTCGGATTATTTATTCAAGTTTGGAGGATATGATAACTCACTATAGATATTAGTTACAACTACACAAGGATCGTGGCTTTCTTAAACCATAAAAATGAACAGAATTTATGAATGCAAACATGAACATGAAGTAAGCTTAATTTATCTTAATATGATTTATTACTTGCTGGTTTTAATATAATTGTTTGTTTTATCTTTTCTAGTCGTTACTTGTTTCTTTGTTTATTGCTCATTTTAGGTCCATCTTCAATTAATGGGAATTCAGCAAGCTGGGGTTCCATTGCCAACAGATGCAGTTGAGGAGCCTGTTTTTGTGAATGCTAAACAGTATCATGGAATTTTACGACGTCGACAGTCTCGTGCTAAAGCTGAATCCGAAAATAAAGCTCTGAAGTGTAGGAAGGTAAGGCACAAATATGATAGAATCTACCACACTTTTCTATTAAAATAAGATAAACCTCTCGAGAGAATCTCTCAAAGAGCCGCAATACAATAATGATAATTCGATAGCCAAAAGAGTAACCTAGTCCGCCTATTTATAGCCTTCCTAGGATTTAACCTAACTTTGTAAATAACTCTATTTAGGCCCATAGGCCCATTACAAACTAAATGCTCATAATAAAATATATTAAAATAGTAATTAGCTCATTCTTCACTTCTTGCTTCGCCTCGAATATACTTTTAATGACGTCGGGATCGTATCAATACTTCCCCCCCACAGAGCCACCTTGTCCTCAAGGTGAAAGTCCGGAAATTGCACTTCCAAATCAGCCGCGGACTCCCAAGTCGCATCCTCTGGTGCGGAGCCTTCCCATTGAACCAAAACTTGACGCGATCCGGCCGCGTGTAAATTCTCCTGGACGCCCAACACAGCCTTAGGGCGAACCACCATGCACATATCATCTCCCACCAAGGACGGTGCAGACATGACAAGAACCGACGAGTCTCCCGCTTTACGCAGAACTGACACGTGAAAAACCGGGTGAATCTTAACTGCCGGCGGTAGTTCCAAACGATAAGCAACAGGACCTACTCGAGCCAAAGCACACGGGGGGCCAATAAACCTCGGCGCCCGGCAGGTGTTGAAATTTAGCCAAAGAAGATTGGCGGTATGGTCGAAGCTTGATATACACCAGATCATCAATATTAAACTGTACATCCCTACGTTTTGCGTTTGCGCGATCCGCCATAGATTGTTGCGCTCGCAACAAGCTAGCCTTTAATGTGGTCAAGATCCGATCACGATCCTTCATCAATGAATCCACAGACGCCACTGGGCTAACTCCGTGATCATAACCCAACAGGGTAGGAGGGGGTCTGCCATAAATAATCTCGAAAGGTGTCATACCCGTGGATGAGTGGAAAGAAGTGTTAAAGCTGTACTCCGCCCAGGACAACCATTGGTACCACGCCTTAGGATGATGCATCACAAAACACCTCAAATAGGATTCCGACAACGATTCACCACCTCGATCGCCCATCGATGCATGGATGGTAAGTGGTGCTCCGACACAGTTTAGTGCCCGTAGCCTTGAACATCTCTTCCCAAAGCAAACTCGTAAAGACCTTATCGCGGTCGGATACAATACTTTTTGGAATTCCGTGCAACCGAACAATCTCCTTGATAAACACCTTTGACACCGACAAGGAAGAAAACGGGTGTCGAAGAGGTATGAAATGAGAATATTTGGACAAACGGTCAACCACCACCAGTATAGTGTCATAACCCTCGGATCGCGGTAAACCTTCCACAAAGTCCATCGAAATATCTTCCCAGACCTGTGCAGGGATCGGCAAAGGCTGTAGCAACCCCGCAGGAGATAAGGATAAGTGTTTAGCTTGAACACGGATAGAGCATTCGCCACAAAGGAACGCACACGAGCCTTCATTCCTTGCCAATACACCTCCTTAGCCAAGCGCTGATAAGTTTTAAGGACTCAGAAATGTCCCCAATAGCACCACTATGGAATTCAAGCAAAAGTAGAGGAATCGTTGGGGATGTCGGAGGCAAAACAAGTCGACCCTGATAAAGCAACACATCACCAACTACTGAGTATCCCGGAGGGGCCCCCTTACCAGCGGTCACTGACTTATAAATTTCCATCAGCTTATCATCCTCTTTAACTTTTATTTATAATAAATACGGCGGTGTTAATACCCGCCACCACACTCGGCATGCCAAGCTCGCATTTTTCTCGGGCATTCGTGACAAGGCATCCGCAGCTTCTATTTTCAAGGCCCTTCTTATATTCGATCTTTGAAATCATAACCCATTAATTTCGCAATCCATCGCTGATAGTCGCCATCCACTACACGCTGCTCAAGAAGAAATTTCAGACTCTTCTGGTCAGTACGAACAACAAAGTGATGCCCTAACAGATAGGCCCGCCAGCGCTGCACCGCGAAAACGATTGCCATCAATTCACGTTCATACACCGGTTTCACCCGATGAGTAATTGGCAATGCCCTGCTAAAATATGCTATCGGCTGACCCTGTTGCATCAGAACTGCTCCCACCCCGATGCCCGAAGCATCGGTTTCGACCACAAATACTTGGTCAAAATCTGGCAATCGCAGGACCGGAACACTACTCATAGCATGTTTCAGTCGCTGAAAACTGTCTTCGGCAGCCGGTCCCCACTCAAACTTCCCCTTCTTTAATAGCTGGGTCAATGGAAAAGCCATGGAACCGTAGTTAGCCACAAAACGTCGATAGTATCCGGTTAACCCCAGGAATCCTCGGAGGTCCCGAATATTTCGAGGACTGGGCCACTCAATCATCGCTGTGATCTTTGCCGGGTCGGCAGAGACGCCTTCCACAGATATAAAGTGCCCTAAGTACTCAATACGTTGCAACCCAAATTGGCACTTCTTCGCATTTGCGACGAAAGCATGTGCTGCGCAAACCTCAAAAACACAAGCCGGTGCTCCTGTGTTTCTGAATAGTCATCTTTGTAAATCAAAATATCATCAAAAATACCAAAGACGAACTTACGCGAATCGACGCCGCAAAATCTCATTCATCACAGACTGGAACGTAGCCGGAGCATTCCGCAACCCAAAGGGCATGACTACAAACTCGTAATGTCCTTCATGCGTTCGAAAAGCTGTCTTGTATACGTCGGTCGGTTTGACACGAATTTGGTGATATCCAGCCTTTAGATCAATTTTCGAGAAAACAGAAGCGCCATGAAGCTCATCCAACAATTCATCCACCAGCGGTATCGGGTATTTATCCGGTACTGTAGCTTGATTTAATGCACGGTAATCGACACAGAAACGCCAACTTCCATCCTTCTTTTTCACTAACAACACAGGGCTAGAGAAAGAACTCGTGCTAGGGCGAATTACCCCGGCTAACAACATTTCCCGTACTAGTTTTTCTATCTCGTTTTTCTGATATTGTGGGTACCGATATGGCCGGACATTCACTGAGTTCGTCCCCGCAATCAGTTCAATCGCATGATCACAGTTTCGTTCAGGAGGTAAATCACAAAAGATTGAAAAACCGGTGAAAAGATTTAATTAAAGAGTGAAGCTCTCGGGTACCGCGATAAATCCGGAGCATCTTGGTCGGTTCACAATCTGTGTTGTCACCTCACACATGTTCAACTCGACCAGTAATCCTTGGTCCTCAGGTCGTAAGGATTTCATCATGGATTTCAAGGATACTTGAGCCTTGACCAACCGGGGGTCCCCTTGCAATTCTGCCTGCCAGGACCCCAACACAAACCGCATCTTCAGGGAACTGAAATTGAATTCTATCCTTCCCAATGTTTCTAGCCATGCCACCCCCAAAATCACATCTGCGCTACCTAAAGGTAAGGGTAGGAATTCATGTACCACTTTCAATTCAGCAAGGTGTAGAACCACATTTTTACAGATTCCCGCCGTTCGCACAGATTCGCCGGTTCCCAACATGATGCCATAATCATTTGAGGGCTCTATCGGTAACTTTAACTTCTCCACAATGACGTCGGAAATAAAGTTATGGGTGGCCCCACAATCTATCAGAACTACCACTTCTAACCCCTGAATAAATCCAGTGACTTTCAAAGTCTTCGGCGAGCTCAGCCCCGCCAATGAGTTTAAGGACAACGCCGCTAAATCCCTTGTATCGCCCGTATCCACAAAAGTTTCATCCTCCAGTGCCTCATCATTTTCGGACGAATCCTCGTGGTCATAGGTGTCGCGTACTACCAATATCTCCAAAGATTGAAGTTCTTTCTTTTTGCATCGGTGCCCGGGCACAAATCTCTCGTCGCAACGGAAACACAACCCTTTATCCTTCCTGACACGGATTTCACTGTCTGTCAAACGCTTATACGGCGTAGTGGTCGTTGTCTTTGTTTGTAATCGGTTTTAGACGTTGAGAACGTAGTCGTTCTCATAGTTGCAACACCCGTTCCCAGACTAACAAGTCCCGATCCCCCACTTGTTCTGTTCACTAGTCCCGGGCTCACCCCTTTTCCTAGTGCTCGGAAAGCCAGATCATCCTCAATTACTTGTGCCATAAACTTTTTATCTTGTATTCCCACGGGTCGCAATTTTCTCATTTCACTCCTTATTTCTTCTTTTAAACCGCTCTCCCATTTCCCTTCTAACGCACTGGCACTAATATCGCGCATTCCCTTAGCATATTTCTCAAACAGTCGCCGATATTCTTTAACAGTGCCCTCTTGTCGCAAACTCATCAGCTTAGCGTACCTGTTGTCATTTATGCTGGGTTGGAATCGGTGTAACAGGAGCTCACGAAATTCTTCCCAAGAACTGATCGGTGATCGATCTTCCTCGTACTGCAACCATTCCAGGGCCTCACCCTCCATACACAAAGCCGCGGCGTCGACTCGTTCCTGCCCAATTAATCGGTTAACCCAAAAATACCGTTCCACTCGACACAACCAACCTTCCGGATCCTCATCAGTAAGACCCTTAAAAACCGGCATCTCGAGCTTCCGTAACCTCCTGTCAAATCTTTGGACTCGCTTTCGCTCTCCTATGTTCGGTCCTCCTGTTCATATCGGTCCTCCCACTCTCTCGGTCTTCCCGTCTCCCTCTCGATTACACGCCATCCCACCCCCGCTCGTTCCAACCGTGCGTGCGCTATTGGTCTGTCATAACCCATGCGCACCCTCCTCTCCTCCGGTGACTCATGGACCCGGTCGTTACTCCCGTCACCAAACTCCGGGTATCTCTCTCTCCGGTCCCGCTCAAATGGTCCAGACCGACCCGACCCGAACAACCCGACCCGGTCCCCCTTGACCGCCGTCGTGCCCCCCGACGCCTGGCCTGCCGTGTGCCACACCCGCCCGCCGCGCGCCCGACCCGCTCGCCCGACACACCGCCGAGCCGGCTGCTCGCCCGCGCGCGCCGACAGCGCCAACCACGCCCGGCCCACTGCCCGGCCCCCAGGCCACACGACCCCCTGCGCCCCCGCAGACAGCGCCGCCCGCGCCTGCGCCCCAACCCGCGCGACCCCCCGCGCCCATTCCGCTCGCGCTCCAGCCCGCGCGCGCGCCTCTACGACGACGGTCGCCGCCTGCTTCGCGCCCGCTCCTTCCGCTTGCGTCGCCACGCGCATGCTGCGCCCGATCTGTCCCCATCGGCACCAGTGCTGCCCTCGCGCCATTCAGGCCGCCGAGCGACCTCCGCCGCCAGAGTCCACCCCCTTCCCTTTGTCCGCACCGCTTGCCTCGGTTTCTGGCCGTTCCGGTGTTCGTTCTAGCAACTTTTGTAAATTTAGGTTAATTTGACCTATCTCACTATTCATCGCTGCCAGTTGAACCTCGAATTCCTGTTGCTTCTTCACCATCTCGGCACCACTCGATTCGCACTCTTGAACCCTAGTCTCCATCTTGGTAGTTACCATTCCCGGATCGGTAAATGACTCTGATACCAAAATGATAGAATCTACCACACTTTTCTATTAAAATAAGATAAACCTCTCGAGAGAATCTCTCAAAGAGCCGCAATACAATAATGATAATTCGATAGCCAAAAGAGTAACCTAGTCCGCCTATTTATAGCCTTCCTAGGATTTAACCTAACTTTGTAAATAACTCTATTTAGGCCCATAGGCCCATTACAAACTAAATGCTCATAATAAAATATATTAAAATAGTAATTAGCTCATTCTTCACTTCTTGCTTCGCCTCGAATATACTTTTAATGACGCCGGGATCGTATCAAAATATTACCTTGTTAAATGCTGAGTTTGCATAATTGTGATAGGCCTCCCATTGTATCTACTAGAAAGGAAAGTGCAAAAAGGGCATGGATGGGTAGGCTAGTTAGTTAGAAGGGATAGTTCATTCTATTAACAGTAGTTTGGCACCTAAGATGAGTTATTAGCATGGTACTTAGTGGTTGTAGTTGCCGTAGTCCTCCGTATCCTTTAATGGACGGTAGCACGTAGCAGATCGTATCAAATTTCTTTTGTCTTTGAGCAGTGAGGTAGAGCTATATGACTCTTGGTTAGCTTTCCTTTCACGTTGCTTCATTCTTTAGTTTTTAACTGCCTAGTTTCTATATATTCTGCAGCCATACTTGCATGAATCTCGACATTTGCATGCATTGAGAAGAGCTAGGGGCTGTGGTGGACGGTTTCTCAAATCAAATGAAAATGAGAATCAAAATGAAGTGGCATCAGGTGATAAATCAAAGTCCAATATTAATCTGAATTCTGATAGAAGTGATCTAGCTTCTTCAGAGGACTGATGCCTGAGGCATTGTTGGTGAATGGTGAACAGTGCATGTCAACAATTGTAAGGAAATTGAAGGCCCAATACCAGCTTCAGTTGTCTTAGTATCACTTCATCCTTAGTCTATACCAGCAGCATTTTAGCATATAGGTTACAACTTACAGTAGATGTTACTTAGGGAGGATCCAGAATTTAGCAGGCAAAAGTATGCAATATTTAATACATCGTAAATACTAAAGTGAGTAAGCTTATTGTTCTGTTTGAACGGTGGTTGTACTAGGTTTGCAAATATTAAATCTACTGTTTTGTAGTATTAGTTTCTATTTACGTTGCTCTCCACCTCAAAAATAAGTCTAAGTGGTTAAATTGAAATGGACCTTGTATTGTATATTTGTATAATATTGGTCCTAGCTGTATTTTTTTACTTTA

mRNA sequence

GTGTTTGTGGATTCCGAGCTTCCATTGTCTCCTCTCTTCAATCTAAAATTTCACCAAAAAACTGCAACAAAATTCATAGTCCTCAACTGCAAAAGACGATCGACGAATCAAGGGGGTGAGAATTTACCAAACCCCTTTCCAGAATTCCCAATTTCCAGGTTTCACGTGGTGTGCACTACGACCCAATGACTTCTTCTGTCCATGATTATTCTGATAATCGTGAGGCTGATGAGCAGCAAAAGTACACTGAATCTCAGAATCATTCTTCGTCAGTCATAAATGGACTAAATCAACCAAGTGTCACAACCCCAAATCAGTATTTAACACCTCGACAAGCTGGAGCAGGACATGCTTTGGCACCCCCTGCCTTTCCATATCCAGATCCTTATTACAGAAGCATCTTTTCTCCTTATGATGCTCAACCGTATCCTCCCCAGCCCTATGGTGGGCAACCTATGGTCCATCTTCAATTAATGGGAATTCAGCAAGCTGGGGTTCCATTGCCAACAGATGCAGTTGAGGAGCCTGTTTTTGTGAATGCTAAACAGTATCATGGAATTTTACGACGTCGACAGTCTCGTGCTAAAGCTGAATCCGAAAATAAAGCTCTGAAGTGTAGGAAGCCATACTTGCATGAATCTCGACATTTGCATGCATTGAGAAGAGCTAGGGGCTGTGGTGGACGGTTTCTCAAATCAAATGAAAATGAGAATCAAAATGAAGTGGCATCAGGTGATAAATCAAAGTCCAATATTAATCTGAATTCTGATAGAAGTGATCTAGCTTCTTCAGAGGACTGATGCCTGAGGCATTGTTGGTGAATGGTGAACAGTGCATGTCAACAATTGTAAGGAAATTGAAGGCCCAATACCAGCTTCAGTTGTCTTAGTATCACTTCATCCTTAGTCTATACCAGCAGCATTTTAGCATATAGGTTACAACTTACAGTAGATGTTACTTAGGGAGGATCCAGAATTTAGCAGGCAAAAGTATGCAATATTTAATACATCGTAAATACTAAAGTGAGTAAGCTTATTGTTCTGTTTGAACGGTGGTTGTACTAGGTTTGCAAATATTAAATCTACTGTTTTGTAGTATTAGTTTCTATTTACGTTGCTCTCCACCTCAAAAATAAGTCTAAGTGGTTAAATTGAAATGGACCTTGTATTGTATATTTGTATAATATTGGTCCTAGCTGTATTTTTTTACTTTA

Coding sequence (CDS)

ATGACTTCTTCTGTCCATGATTATTCTGATAATCGTGAGGCTGATGAGCAGCAAAAGTACACTGAATCTCAGAATCATTCTTCGTCAGTCATAAATGGACTAAATCAACCAAGTGTCACAACCCCAAATCAGTATTTAACACCTCGACAAGCTGGAGCAGGACATGCTTTGGCACCCCCTGCCTTTCCATATCCAGATCCTTATTACAGAAGCATCTTTTCTCCTTATGATGCTCAACCGTATCCTCCCCAGCCCTATGGTGGGCAACCTATGGTCCATCTTCAATTAATGGGAATTCAGCAAGCTGGGGTTCCATTGCCAACAGATGCAGTTGAGGAGCCTGTTTTTGTGAATGCTAAACAGTATCATGGAATTTTACGACGTCGACAGTCTCGTGCTAAAGCTGAATCCGAAAATAAAGCTCTGAAGTGTAGGAAGCCATACTTGCATGAATCTCGACATTTGCATGCATTGAGAAGAGCTAGGGGCTGTGGTGGACGGTTTCTCAAATCAAATGAAAATGAGAATCAAAATGAAGTGGCATCAGGTGATAAATCAAAGTCCAATATTAATCTGAATTCTGATAGAAGTGATCTAGCTTCTTCAGAGGACTGA

Protein sequence

MTSSVHDYSDNREADEQQKYTESQNHSSSVINGLNQPSVTTPNQYLTPRQAGAGHALAPPAFPYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKALKCRKPYLHESRHLHALRRARGCGGRFLKSNENENQNEVASGDKSKSNINLNSDRSDLASSED

Homology

[Close]

BLAST of Sed0018166 vs. NCBI nr
Match: KAG7026424.1 (Nuclear transcription factor Y subunit A-7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 364.0 bits (933), Expect = 8.4e-97
Identity = 189/205 (92.20%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MTSSVHDYSDNREADEQQKYTESQNHSSSVINGLNQPSVTTPNQYLTPRQAGAGHALAPP 60
           MTSSVHDYSDN EAD+ QKY+ESQNHSSSVINGLNQPS+T  NQYLTP Q GAGHALAPP
Sbjct: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPSITASNQYLTPLQVGAGHALAPP 60

Query: 61  AFPYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           A+PYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKCRKPYLHESRHLHALRRARGCGGRFLKSNENEN-QNE 180
           QYHGILRRRQSRAKAESENKALK RKPYLHESRHLHALRRARGCGGRFLKSN+NEN QNE
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180

Query: 181 VASGDKSKSNINLNSDRSDLASSED 205
           VASGDKS  NINLNSDRSDLASSE+
Sbjct: 181 VASGDKSHPNINLNSDRSDLASSEN 205

[Close]

BLAST of Sed0018166 vs. NCBI nr
Match: XP_023003807.1 (nuclear transcription factor Y subunit A-7-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 363.2 bits (931), Expect = 1.4e-96
Identity = 189/205 (92.20%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1   MTSSVHDYSDNREADEQQKYTESQNHSSSVINGLNQPSVTTPNQYLTPRQAGAGHALAPP 60
           MTSSVHDYSDN EAD+ QKY+ESQN+SSSVINGLNQPS+TT NQYLTP Q GAGHALAPP
Sbjct: 18  MTSSVHDYSDNGEADKLQKYSESQNNSSSVINGLNQPSITTSNQYLTPLQVGAGHALAPP 77

Query: 61  AFPYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           A+PYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 78  AYPYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 137

Query: 121 QYHGILRRRQSRAKAESENKALKCRKPYLHESRHLHALRRARGCGGRFLKSNENEN-QNE 180
           QYHGILRRRQSRAKAESENKALK RKPYLHESRHLHALRRARGCGGRFLKSN+NEN QNE
Sbjct: 138 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 197

Query: 181 VASGDKSKSNINLNSDRSDLASSED 205
           VASGDKS  NINLNSDRSDLASSE+
Sbjct: 198 VASGDKSHPNINLNSDRSDLASSEN 222

[Close]

BLAST of Sed0018166 vs. NCBI nr
Match: XP_022926734.1 (nuclear transcription factor Y subunit A-7-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 360.5 bits (924), Expect = 9.3e-96
Identity = 188/205 (91.71%), Postives = 194/205 (94.63%), Query Frame = 0


Query: 1   MTSSVHDYSDNREADEQQKYTESQNHSSSVINGLNQPSVTTPNQYLTPRQAGAGHALAPP 60
           MTSSVHDYSDN EAD+ QKY+ESQNHSSSVINGLNQPS+T  NQYLTP Q GAGHALAPP
Sbjct: 18  MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPSITASNQYLTPLQVGAGHALAPP 77

Query: 61  AFPYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           A+PYPDPYYRSIFSPYDAQP PPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 78  AYPYPDPYYRSIFSPYDAQPCPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 137

Query: 121 QYHGILRRRQSRAKAESENKALKCRKPYLHESRHLHALRRARGCGGRFLKSNENEN-QNE 180
           QYHGILRRRQSRAKAESENKALK RKPYLHESRHLHALRRARGCGGRFLKSN+NEN QNE
Sbjct: 138 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 197

Query: 181 VASGDKSKSNINLNSDRSDLASSED 205
           VASGDKS  NINLNSDRSDLASSE+
Sbjct: 198 VASGDKSHPNINLNSDRSDLASSEN 222

[Close]

BLAST of Sed0018166 vs. NCBI nr
Match: XP_022146628.1 (nuclear transcription factor Y subunit A-7 [Momordica charantia])

HSP 1 Score: 360.1 bits (923), Expect = 1.2e-95
Identity = 185/205 (90.24%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MTSSVHDYSDNREADEQQKYTESQNHSSSVINGLNQPSVTTPNQYLTPRQAGAGHALAPP 60
           MTSSVHDYSDN EADEQQKY+ESQNHS SVINGLNQPS+ TPNQY+TP Q GAGHA+APP
Sbjct: 1   MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP 60

Query: 61  AFPYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           A+PYPDPYYRSIF+PYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKCRKPYLHESRHLHALRRARGCGGRFLKSNENEN-QNE 180
           QYHGILRRRQSRAKAESENKALK RKPYLHESRHLHALRRARGCGGRFLKSN+ EN QNE
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNE 180

Query: 181 VASGDKSKSNINLNSDRSDLASSED 205
           VASG KS+ NINLNSD+SDLASSE+
Sbjct: 181 VASGGKSQPNINLNSDKSDLASSEN 205

[Close]

BLAST of Sed0018166 vs. NCBI nr
Match: XP_038883162.1 (nuclear transcription factor Y subunit A-7-like [Benincasa hispida])

HSP 1 Score: 359.8 bits (922), Expect = 1.6e-95
Identity = 185/205 (90.24%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MTSSVHDYSDNREADEQQKYTESQNHSSSVINGLNQPSVTTPNQYLTPRQAGAGHALAPP 60
           MTSSVHDYSDN EADEQQKY+ESQNHSSSVINGLNQPS+ TPNQY+T  Q GAGHA+AP 
Sbjct: 1   MTSSVHDYSDNAEADEQQKYSESQNHSSSVINGLNQPSIATPNQYVTSTQIGAGHAMAPA 60

Query: 61  AFPYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           A+PYPDPYYRSIF+PY+ QPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPYPDPYYRSIFTPYEPQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKCRKPYLHESRHLHALRRARGCGGRFLKSNENEN-QNE 180
           QYHGILRRRQSRAKAESENKALK RKPYLHESRHLHALRRARGCGGRFLKSN+NEN QNE
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNE 180

Query: 181 VASGDKSKSNINLNSDRSDLASSED 205
           VASGDKS+ NINLNSDRSDLASSE+
Sbjct: 181 VASGDKSQPNINLNSDRSDLASSEN 205

[Close]

BLAST of Sed0018166 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 5.8e-48
Identity = 111/202 (54.95%), Postives = 144/202 (71.29%), Query Frame = 0


Query: 1   MTSSVHDYSDNREADEQQKYTESQNHSSSVINGLNQPSVTTPNQYLTPRQAGAGHALAPP 60
           MTSS+H+ SDN  + E+Q+  +S +    + +  N  S+ T   Y  P   G  +++AP 
Sbjct: 1   MTSSIHELSDNIGSHEKQEQRDS-HFQPPIPSARNYESIVTSLVYSDP---GTTNSMAPG 60

Query: 61  AFPYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            +PYPDPYYRSIF+P      PPQPY G   VHLQLMG+QQ GVPLP+DAVEEPVFVNAK
Sbjct: 61  QYPYPDPYYRSIFAP------PPQPYTG---VHLQLMGVQQQGVPLPSDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKCRKPYLHESRHLHALRRARGCGGRFLKSNENENQNEV 180
           QYHGILRRRQSRA+ ES+NK +K RKPYLHESRHLHA+RR RGCGGRFL + + +  +E 
Sbjct: 121 QYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHED 180

Query: 181 ASGDKSKSNINLNSDRSDLASS 203
           +S ++     NL++ +S +A+S
Sbjct: 181 SSHEEKS---NLSAGKSAMAAS 186

[Close]

BLAST of Sed0018166 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.6e-42
Identity = 108/207 (52.17%), Postives = 141/207 (68.12%), Query Frame = 0


Query: 1   MTSSVHDYSDNREADEQQKYTESQNHSSSVINGLNQPSVTTPNQYLTPRQAGAGHALAPP 60
           MTSSVH+ SDN E+  +++  +SQ     V +G +  S+ T + Y  P        +A  
Sbjct: 1   MTSSVHELSDNNESHAKKERPDSQTR-PQVPSGRSSESIDTNSVYSEP--------MAHG 60

Query: 61  AFPYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            +PYPDPYYRS+F+    Q Y P PY   P V LQLMG+QQ GVPL  DAVEEPVFVNAK
Sbjct: 61  LYPYPDPYYRSVFA---QQAYLPHPY---PGVQLQLMGMQQPGVPLQCDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKCRKPYLHESRHLHALRRARGCGGRFL---KSNENENQ 180
           QYHGILRRRQSRAK E+ N+A+K +KPY+HESRHLHA+RR RGCGGRFL   K N +  +
Sbjct: 121 QYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKE 180

Query: 181 NEVASGDK--SKSNINLNSDRSDLASS 203
            E A+ D+  S+++ +L S++  +A+S
Sbjct: 181 EEEATSDENTSEASSSLRSEKLAMATS 192

[Close]

BLAST of Sed0018166 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 4.4e-24
Identity = 81/194 (41.75%), Postives = 101/194 (52.06%), Query Frame = 0


Query: 10  DNREADEQQKYTESQNHSSSVINGLNQPSVTTPNQYLTPRQAGAGHALA-PPAFPYPDPY 69
           DN    E Q  T  Q  S+   +  NQ S+        P     GH +    + PY DPY
Sbjct: 74  DNTVNKESQVTTSPQ--SAGDYSDKNQESLHHGITQPPPHPQLVGHTVGWASSNPYQDPY 133

Query: 70  YRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRR 129
           Y  +   Y   P    PYGG P           + +PLP +  +EPVFVNAKQY  ILRR
Sbjct: 134 YAGVMGAYGHHPLGFVPYGGMP----------HSRMPLPPEMAQEPVFVNAKQYQAILRR 193

Query: 130 RQSRAKAESENKALKCRKPYLHESRHLHALRRARGCGGRFLKSNENE----NQNEVASGD 189
           RQ+RAKAE E K +K RKPYLHESRH HA+RR RG GGRF K    E       E ++G 
Sbjct: 194 RQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKKTNTEASKRKAEEKSNGH 253

Query: 190 KSKSNINLNSDRSD 199
            ++S  + NSD+ +
Sbjct: 254 VTQSPSSSNSDQGE 255

[Close]

BLAST of Sed0018166 vs. ExPASy Swiss-Prot
Match: Q9SYH4 (Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana OX=3702 GN=NFYA5 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.8e-24
Identity = 63/114 (55.26%), Postives = 80/114 (70.18%), Query Frame = 0


Query: 71  SIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVE-EPVFVNAKQYHGILRRR 130
           S F+ + A  Y   P     + HL++MG+  + VPLP    E EP+FVNAKQYH ILRRR
Sbjct: 138 SHFNGFLAPEYASTP---TALPHLEMMGLVSSRVPLPHHIQENEPIFVNAKQYHAILRRR 197

Query: 131 QSRAKAESENKALKCRKPYLHESRHLHALRRARGCGGRFLKSNE-NENQNEVAS 183
           + RAK E++NK +KCRKPYLHESRHLHAL+RARG GGRFL + +  E+ N + S
Sbjct: 198 KHRAKLEAQNKLIKCRKPYLHESRHLHALKRARGSGGRFLNTKKLQESSNSLCS 248

[Close]

BLAST of Sed0018166 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.2e-22
Identity = 83/207 (40.10%), Postives = 111/207 (53.62%), Query Frame = 0


Query: 3   SSVHDYSDNREADEQQKYTESQNHSSSVIN-GL--NQPSVTTPN---QYLTPRQAGAGHA 62
           S+  D + N E D   K +++   S SV N G+  N P+++  N   Q L       GH 
Sbjct: 66  SASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPPELVGHY 125

Query: 63  LAPPAFPYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVF 122
           +A    PY DPYY  +   Y  Q    +PY G P          +    LP D  +EPV+
Sbjct: 126 IACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMP----------RERTALPLDMAQEPVY 185

Query: 123 VNAKQYHGILRRRQSRAKAESENKALKCRKPYLHESRHLHALRRARGCGGRFLKSNENEN 182
           VNAKQY GILRRR++RAKAE E K ++ RKPYLHESRH HA+RRAR  GGRF K +E E 
Sbjct: 186 VNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA 245

Query: 183 QNEVASGDKSKSNINLNSDRSDLASSE 204
             +    D+ + +   NS  S+   ++
Sbjct: 246 GEDAGGRDRERGSAT-NSSGSEQVETD 261

[Close]

BLAST of Sed0018166 vs. ExPASy TrEMBL
Match: A0A6J1KNN1 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111497281 PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 7.0e-97
Identity = 189/205 (92.20%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1   MTSSVHDYSDNREADEQQKYTESQNHSSSVINGLNQPSVTTPNQYLTPRQAGAGHALAPP 60
           MTSSVHDYSDN EAD+ QKY+ESQN+SSSVINGLNQPS+TT NQYLTP Q GAGHALAPP
Sbjct: 18  MTSSVHDYSDNGEADKLQKYSESQNNSSSVINGLNQPSITTSNQYLTPLQVGAGHALAPP 77

Query: 61  AFPYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           A+PYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 78  AYPYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 137

Query: 121 QYHGILRRRQSRAKAESENKALKCRKPYLHESRHLHALRRARGCGGRFLKSNENEN-QNE 180
           QYHGILRRRQSRAKAESENKALK RKPYLHESRHLHALRRARGCGGRFLKSN+NEN QNE
Sbjct: 138 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 197

Query: 181 VASGDKSKSNINLNSDRSDLASSED 205
           VASGDKS  NINLNSDRSDLASSE+
Sbjct: 198 VASGDKSHPNINLNSDRSDLASSEN 222

[Close]

BLAST of Sed0018166 vs. ExPASy TrEMBL
Match: A0A6J1EG07 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111433767 PE=3 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.5e-96
Identity = 188/205 (91.71%), Postives = 194/205 (94.63%), Query Frame = 0


Query: 1   MTSSVHDYSDNREADEQQKYTESQNHSSSVINGLNQPSVTTPNQYLTPRQAGAGHALAPP 60
           MTSSVHDYSDN EAD+ QKY+ESQNHSSSVINGLNQPS+T  NQYLTP Q GAGHALAPP
Sbjct: 18  MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPSITASNQYLTPLQVGAGHALAPP 77

Query: 61  AFPYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           A+PYPDPYYRSIFSPYDAQP PPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 78  AYPYPDPYYRSIFSPYDAQPCPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 137

Query: 121 QYHGILRRRQSRAKAESENKALKCRKPYLHESRHLHALRRARGCGGRFLKSNENEN-QNE 180
           QYHGILRRRQSRAKAESENKALK RKPYLHESRHLHALRRARGCGGRFLKSN+NEN QNE
Sbjct: 138 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 197

Query: 181 VASGDKSKSNINLNSDRSDLASSED 205
           VASGDKS  NINLNSDRSDLASSE+
Sbjct: 198 VASGDKSHPNINLNSDRSDLASSEN 222

[Close]

BLAST of Sed0018166 vs. ExPASy TrEMBL
Match: A0A6J1CZ21 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111015782 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 5.9e-96
Identity = 185/205 (90.24%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MTSSVHDYSDNREADEQQKYTESQNHSSSVINGLNQPSVTTPNQYLTPRQAGAGHALAPP 60
           MTSSVHDYSDN EADEQQKY+ESQNHS SVINGLNQPS+ TPNQY+TP Q GAGHA+APP
Sbjct: 1   MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP 60

Query: 61  AFPYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           A+PYPDPYYRSIF+PYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKCRKPYLHESRHLHALRRARGCGGRFLKSNENEN-QNE 180
           QYHGILRRRQSRAKAESENKALK RKPYLHESRHLHALRRARGCGGRFLKSN+ EN QNE
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNE 180

Query: 181 VASGDKSKSNINLNSDRSDLASSED 205
           VASG KS+ NINLNSD+SDLASSE+
Sbjct: 181 VASGGKSQPNINLNSDKSDLASSEN 205

[Close]

BLAST of Sed0018166 vs. ExPASy TrEMBL
Match: A0A6J1ED47 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111433240 PE=3 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 1.9e-94
Identity = 180/205 (87.80%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MTSSVHDYSDNREADEQQKYTESQNHSSSVINGLNQPSVTTPNQYLTPRQAGAGHALAPP 60
           MTSSVHDYSDN EAD+QQKY++S NHSSSVINGLNQP +TTPNQY+ P Q GAGH++APP
Sbjct: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60

Query: 61  AFPYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           A+P+PDPYYRSIF+PYD+QPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKCRKPYLHESRHLHALRRARGCGGRFLKSNENEN-QNE 180
           QYHGILRRRQSRAKAESENKALK RKPYLHESRHLHALRRARGCGGRFLKSN+NEN Q E
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180

Query: 181 VASGDKSKSNINLNSDRSDLASSED 205
           VASGDKS+ NINLNSD+SDLASSE+
Sbjct: 181 VASGDKSQPNINLNSDKSDLASSEN 205

[Close]

BLAST of Sed0018166 vs. ExPASy TrEMBL
Match: A0A6J1IRJ2 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111478068 PE=3 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 7.2e-94
Identity = 179/205 (87.32%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MTSSVHDYSDNREADEQQKYTESQNHSSSVINGLNQPSVTTPNQYLTPRQAGAGHALAPP 60
           MTSSVHD+SDN EAD+QQKY++S NHSSSVINGLNQP +TTPNQY+ P Q GAGH++APP
Sbjct: 1   MTSSVHDHSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60

Query: 61  AFPYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           A+P+PDPYYRSIF+PYD+QPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKCRKPYLHESRHLHALRRARGCGGRFLKSNENEN-QNE 180
           QYHGILRRRQSRAKAESENKALK RKPYLHESRHLHALRRARGCGGRFLKSN+NEN Q E
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180

Query: 181 VASGDKSKSNINLNSDRSDLASSED 205
           VASGDKS+ NINLNSD+SDLASSE+
Sbjct: 181 VASGDKSQPNINLNSDKSDLASSEN 205

[Close]

BLAST of Sed0018166 vs. TAIR 10
Match: AT1G30500.2 (nuclear factor Y, subunit A7 )

HSP 1 Score: 192.2 bits (487), Expect = 4.1e-49
Identity = 111/202 (54.95%), Postives = 144/202 (71.29%), Query Frame = 0


Query: 1   MTSSVHDYSDNREADEQQKYTESQNHSSSVINGLNQPSVTTPNQYLTPRQAGAGHALAPP 60
           MTSS+H+ SDN  + E+Q+  +S +    + +  N  S+ T   Y  P   G  +++AP 
Sbjct: 1   MTSSIHELSDNIGSHEKQEQRDS-HFQPPIPSARNYESIVTSLVYSDP---GTTNSMAPG 60

Query: 61  AFPYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            +PYPDPYYRSIF+P      PPQPY G   VHLQLMG+QQ GVPLP+DAVEEPVFVNAK
Sbjct: 61  QYPYPDPYYRSIFAP------PPQPYTG---VHLQLMGVQQQGVPLPSDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKCRKPYLHESRHLHALRRARGCGGRFLKSNENENQNEV 180
           QYHGILRRRQSRA+ ES+NK +K RKPYLHESRHLHA+RR RGCGGRFL + + +  +E 
Sbjct: 121 QYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHED 180

Query: 181 ASGDKSKSNINLNSDRSDLASS 203
           +S ++     NL++ +S +A+S
Sbjct: 181 SSHEEKS---NLSAGKSAMAAS 186

[Close]

BLAST of Sed0018166 vs. TAIR 10
Match: AT1G30500.1 (nuclear factor Y, subunit A7 )

HSP 1 Score: 182.2 bits (461), Expect = 4.2e-46
Identity = 107/202 (52.97%), Postives = 140/202 (69.31%), Query Frame = 0


Query: 1   MTSSVHDYSDNREADEQQKYTESQNHSSSVINGLNQPSVTTPNQYLTPRQAGAGHALAPP 60
           MTSS+H+ SDN  + E+Q+  +S +    + +  N  S+ T   Y  P   G  +++AP 
Sbjct: 1   MTSSIHELSDNIGSHEKQEQRDS-HFQPPIPSARNYESIVTSLVYSDP---GTTNSMAPG 60

Query: 61  AFPYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            +PYPDPYYRSIF+P      PPQPY G       LMG+QQ GVPLP+DAVEEPVFVNAK
Sbjct: 61  QYPYPDPYYRSIFAP------PPQPYTG-------LMGVQQQGVPLPSDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKCRKPYLHESRHLHALRRARGCGGRFLKSNENENQNEV 180
           QYHGILRRRQSRA+ ES+NK +K RKPYLHESRHLHA+RR RGCGGRFL + + +  +E 
Sbjct: 121 QYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHED 180

Query: 181 ASGDKSKSNINLNSDRSDLASS 203
           +S ++     NL++ +S +A+S
Sbjct: 181 SSHEEKS---NLSAGKSAMAAS 182

[Close]

BLAST of Sed0018166 vs. TAIR 10
Match: AT2G34720.1 (nuclear factor Y, subunit A4 )

HSP 1 Score: 174.1 bits (440), Expect = 1.2e-43
Identity = 108/207 (52.17%), Postives = 141/207 (68.12%), Query Frame = 0


Query: 1   MTSSVHDYSDNREADEQQKYTESQNHSSSVINGLNQPSVTTPNQYLTPRQAGAGHALAPP 60
           MTSSVH+ SDN E+  +++  +SQ     V +G +  S+ T + Y  P        +A  
Sbjct: 1   MTSSVHELSDNNESHAKKERPDSQTR-PQVPSGRSSESIDTNSVYSEP--------MAHG 60

Query: 61  AFPYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            +PYPDPYYRS+F+    Q Y P PY   P V LQLMG+QQ GVPL  DAVEEPVFVNAK
Sbjct: 61  LYPYPDPYYRSVFA---QQAYLPHPY---PGVQLQLMGMQQPGVPLQCDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKCRKPYLHESRHLHALRRARGCGGRFL---KSNENENQ 180
           QYHGILRRRQSRAK E+ N+A+K +KPY+HESRHLHA+RR RGCGGRFL   K N +  +
Sbjct: 121 QYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKE 180

Query: 181 NEVASGDK--SKSNINLNSDRSDLASS 203
            E A+ D+  S+++ +L S++  +A+S
Sbjct: 181 EEEATSDENTSEASSSLRSEKLAMATS 192

[Close]

BLAST of Sed0018166 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 )

HSP 1 Score: 112.8 bits (281), Expect = 3.2e-25
Identity = 81/194 (41.75%), Postives = 101/194 (52.06%), Query Frame = 0


Query: 10  DNREADEQQKYTESQNHSSSVINGLNQPSVTTPNQYLTPRQAGAGHALA-PPAFPYPDPY 69
           DN    E Q  T  Q  S+   +  NQ S+        P     GH +    + PY DPY
Sbjct: 74  DNTVNKESQVTTSPQ--SAGDYSDKNQESLHHGITQPPPHPQLVGHTVGWASSNPYQDPY 133

Query: 70  YRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRR 129
           Y  +   Y   P    PYGG P           + +PLP +  +EPVFVNAKQY  ILRR
Sbjct: 134 YAGVMGAYGHHPLGFVPYGGMP----------HSRMPLPPEMAQEPVFVNAKQYQAILRR 193

Query: 130 RQSRAKAESENKALKCRKPYLHESRHLHALRRARGCGGRFLKSNENE----NQNEVASGD 189
           RQ+RAKAE E K +K RKPYLHESRH HA+RR RG GGRF K    E       E ++G 
Sbjct: 194 RQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKKTNTEASKRKAEEKSNGH 253

Query: 190 KSKSNINLNSDRSD 199
            ++S  + NSD+ +
Sbjct: 254 VTQSPSSSNSDQGE 255

[Close]

BLAST of Sed0018166 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 )

HSP 1 Score: 106.7 bits (265), Expect = 2.3e-23
Identity = 83/207 (40.10%), Postives = 111/207 (53.62%), Query Frame = 0


Query: 3   SSVHDYSDNREADEQQKYTESQNHSSSVIN-GL--NQPSVTTPN---QYLTPRQAGAGHA 62
           S+  D + N E D   K +++   S SV N G+  N P+++  N   Q L       GH 
Sbjct: 66  SASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPPELVGHY 125

Query: 63  LAPPAFPYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVF 122
           +A    PY DPYY  +   Y  Q    +PY G P          +    LP D  +EPV+
Sbjct: 126 IACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMP----------RERTALPLDMAQEPVY 185

Query: 123 VNAKQYHGILRRRQSRAKAESENKALKCRKPYLHESRHLHALRRARGCGGRFLKSNENEN 182
           VNAKQY GILRRR++RAKAE E K ++ RKPYLHESRH HA+RRAR  GGRF K +E E 
Sbjct: 186 VNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA 245

Query: 183 QNEVASGDKSKSNINLNSDRSDLASSE 204
             +    D+ + +   NS  S+   ++
Sbjct: 246 GEDAGGRDRERGSAT-NSSGSEQVETD 261

The following BLAST results are available for this feature:

BLAST of Sed0018166 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026424.1	8.4e-97	92.20	Nuclear transcription factor Y subunit A-7 [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023003807.1	1.4e-96	92.20	nuclear transcription factor Y subunit A-7-like isoform X2 [Cucurbita maxima]	[more]
XP_022926734.1	9.3e-96	91.71	nuclear transcription factor Y subunit A-7-like isoform X2 [Cucurbita moschata]	[more]
XP_022146628.1	1.2e-95	90.24	nuclear transcription factor Y subunit A-7 [Momordica charantia]	[more]
XP_038883162.1	1.6e-95	90.24	nuclear transcription factor Y subunit A-7-like [Benincasa hispida]	[more]

BLAST of Sed0018166 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JP1	5.8e-48	54.95	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	1.6e-42	52.17	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q945M9	4.4e-24	41.75	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9SYH4	5.8e-24	55.26	Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9LXV5	3.2e-22	40.10	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Sed0018166 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KNN1	7.0e-97	92.20	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114972...	[more]
A0A6J1EG07	4.5e-96	91.71	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1CZ21	5.9e-96	90.24	Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1ED47	1.9e-94	87.80	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1IRJ2	7.2e-94	87.32	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114780...	[more]

BLAST of Sed0018166 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30500.2	4.1e-49	54.95	nuclear factor Y, subunit A7	[more]
AT1G30500.1	4.2e-46	52.97	nuclear factor Y, subunit A7	[more]
AT2G34720.1	1.2e-43	52.17	nuclear factor Y, subunit A4	[more]
AT3G20910.1	3.2e-25	41.75	nuclear factor Y, subunit A9	[more]
AT5G12840.1	2.3e-23	40.10	nuclear factor Y, subunit A1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 114..136 score: 73.91 coord: 145..168 score: 78.01
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 110..171 e-value: 1.1E-34 score: 131.3
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 113..168 e-value: 3.3E-26 score: 91.7
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 1..188
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 111..171 score: 36.057648
None	No IPR available	GENE3D	6.10.250.2430		coord: 111..173 e-value: 7.8E-31 score: 108.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..197
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53
None	No IPR available	PANTHER	PTHR12632:SF66	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-7	coord: 1..188
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 116..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018166.1	Sed0018166.1	mRNA
Sed0018166.2	Sed0018166.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity