Sed0018143 (gene) Chayote v1

Overview


Name	Sed0018143
Type	gene
Organism	Sechium edule (Chayote v1)
Description	LOB domain-containing protein
Location	LG10: 4931641 .. 4932848 (-)
RNA-Seq Expression	Sed0018143
Synteny	Sed0018143

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACACAAACAAACAAACATGAGCTGCAACGGCTGCCGCGTTCTCCGAAAGGGCTGCAGCGAATCCTGCATCCTCCGCCCCTGCCTCCAGTGGATCGACTCCGCCGAATCCCAAGGCCACGCCACCGTCTTCGTCGCCAAGTTCTTCGGCCGCGCCGGCCTCATGTCCTTCATCTCCGCCGTCCCCGAACCACAGAGACCTTGTATGTTCCCTCTTTATATTTTGACAAATTATTATATTTGTTTTTCGAAAAGACGGCAGTCTCACAATAGTTTTAACATTTACTTTTTCTCTTCAGCTTTGTTTCAGTCTCTCTTGTTTGAAGCCTGCGGACGCACCGTCAATCCCGTCAACGGCGCCGTCGGCCTTCTCTGGACCGGCAACTGGCACATCTGCCAGGCCGCCGTCGAGACGGTGTTGCGCGGCGGCACGTTGCGGCCGATGAACCAGTTTCTTCACGGCGGATCTCCGAATCCGGCCTCCGACGAGACGAATTCCGACGCCGAAGTCGCCTGTTCGGACATGTGGAAGCTTCGCGATTCTTATCCGAGCTCTCGATTCTCCAACTCCAGATCTAGACTCTCGCCGAAACGGAAGCGATCTGAGGAATCCACCAACAACGATTTGGATCTCTGCTTGACGCCTAAATCAACCTGCCGCCGCGCCGGTACTCCGTCGATGAACTCCGACGAATCCGAAACCACTACCTGCTTCGACAGCGCCGCCCTCGCCGATCTTCGTCACTACGAACGGAAGCTTCTGAATCTATTCGTTTAATGAACAAGGTGCTTCGGTTATGTATGTTTTTCAGTGAATCTGATGTTCACCGGAAATGTAGTGACCGGAATTGAGCCGGAAAGTTGAACGTTCCGCCGTTCCGGCGAGTTTTGTTTCCGTTGTAATTTTGTAATATCCACCGGCACAGGATTTCAGTCTTCGGAACCAGAAGAGTGAGAAATGAGCGTCTGTCGGTGGTTTATTTTTCTTTTTTGGTAATTTAGTTTAGTTGGTGATAATTGCGTGACTGAATAAAATTATTTGTTAAATAAAATTAAATTCGGGCATTTGAAATTCGTTTATTGATCCTCGAAATCACAAAAGAATCGTGTTGTACATAATACGTATACTTCAGTAGTCGACAACATGGAAAGTTGCGTGTGCGAGTCAATACTTGCGGCCGGCGCCCCATCTCAACGACATGTCGTACCG

mRNA sequence

CACACAAACAAACAAACATGAGCTGCAACGGCTGCCGCGTTCTCCGAAAGGGCTGCAGCGAATCCTGCATCCTCCGCCCCTGCCTCCAGTGGATCGACTCCGCCGAATCCCAAGGCCACGCCACCGTCTTCGTCGCCAAGTTCTTCGGCCGCGCCGGCCTCATGTCCTTCATCTCCGCCGTCCCCGAACCACAGAGACCTTCTTTGTTTCAGTCTCTCTTGTTTGAAGCCTGCGGACGCACCGTCAATCCCGTCAACGGCGCCGTCGGCCTTCTCTGGACCGGCAACTGGCACATCTGCCAGGCCGCCGTCGAGACGGTGTTGCGCGGCGGCACGTTGCGGCCGATGAACCAGTTTCTTCACGGCGGATCTCCGAATCCGGCCTCCGACGAGACGAATTCCGACGCCGAAGTCGCCTGTTCGGACATGTGGAAGCTTCGCGATTCTTATCCGAGCTCTCGATTCTCCAACTCCAGATCTAGACTCTCGCCGAAACGGAAGCGATCTGAGGAATCCACCAACAACGATTTGGATCTCTGCTTGACGCCTAAATCAACCTGCCGCCGCGCCGGTACTCCGTCGATGAACTCCGACGAATCCGAAACCACTACCTGCTTCGACAGCGCCGCCCTCGCCGATCTTCGTCACTACGAACGGAAGCTTCTGAATCTATTCGTTTAATGAACAAGGTGCTTCGGTTATGTATGTTTTTCAGTGAATCTGATGTTCACCGGAAATGTAGTGACCGGAATTGAGCCGGAAAGTTGAACGTTCCGCCGTTCCGGCGAGTTTTGTTTCCGTTGTAATTTTGTAATATCCACCGGCACAGGATTTCAGTCTTCGGAACCAGAAGAGTGAGAAATGAGCGTCTGTCGGTGGTTTATTTTTCTTTTTTGGTAATTTAGTTTAGTTGGTGATAATTGCGTGACTGAATAAAATTATTTGTTAAATAAAATTAAATTCGGGCATTTGAAATTCGTTTATTGATCCTCGAAATCACAAAAGAATCGTGTTGTACATAATACGTATACTTCAGTAGTCGACAACATGGAAAGTTGCGTGTGCGAGTCAATACTTGCGGCCGGCGCCCCATCTCAACGACATGTCGTACCG

Coding sequence (CDS)

ATGAGCTGCAACGGCTGCCGCGTTCTCCGAAAGGGCTGCAGCGAATCCTGCATCCTCCGCCCCTGCCTCCAGTGGATCGACTCCGCCGAATCCCAAGGCCACGCCACCGTCTTCGTCGCCAAGTTCTTCGGCCGCGCCGGCCTCATGTCCTTCATCTCCGCCGTCCCCGAACCACAGAGACCTTCTTTGTTTCAGTCTCTCTTGTTTGAAGCCTGCGGACGCACCGTCAATCCCGTCAACGGCGCCGTCGGCCTTCTCTGGACCGGCAACTGGCACATCTGCCAGGCCGCCGTCGAGACGGTGTTGCGCGGCGGCACGTTGCGGCCGATGAACCAGTTTCTTCACGGCGGATCTCCGAATCCGGCCTCCGACGAGACGAATTCCGACGCCGAAGTCGCCTGTTCGGACATGTGGAAGCTTCGCGATTCTTATCCGAGCTCTCGATTCTCCAACTCCAGATCTAGACTCTCGCCGAAACGGAAGCGATCTGAGGAATCCACCAACAACGATTTGGATCTCTGCTTGACGCCTAAATCAACCTGCCGCCGCGCCGGTACTCCGTCGATGAACTCCGACGAATCCGAAACCACTACCTGCTTCGACAGCGCCGCCCTCGCCGATCTTCGTCACTACGAACGGAAGCTTCTGAATCTATTCGTTTAA

Protein sequence

MSCNGCRVLRKGCSESCILRPCLQWIDSAESQGHATVFVAKFFGRAGLMSFISAVPEPQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNQFLHGGSPNPASDETNSDAEVACSDMWKLRDSYPSSRFSNSRSRLSPKRKRSEESTNNDLDLCLTPKSTCRRAGTPSMNSDESETTTCFDSAALADLRHYERKLLNLFV

Homology

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BLAST of Sed0018143 vs. NCBI nr
Match: KAG6594987.1 (LOB domain-containing protein 38, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026944.1 LOB domain-containing protein 38 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 377.1 bits (967), Expect = 1.0e-100
Identity = 199/236 (84.32%), Postives = 208/236 (88.14%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSESCILRPCLQWIDSAESQGHATVFVAKFFGRAGLMSFISAVPEPQR 60
           MSCNGCRVLRKGCSESCILRPCLQWID++E+QGHATVFVAKFFGRAGLMSFISAVPE QR
Sbjct: 1   MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNQFLHGGSPN 120
           PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMN+FL  GSPN
Sbjct: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNEFLAAGSPN 120

Query: 121 PASDETNSDAEVACSDMWKLRDSYPSSRFSNSRSRLSPKRKRSEESTN---NDLDLCLTP 180
           PASDET S+AEVAC+DMWKLRDSYP+SRFSNSRSRLSPKRKRSEEST    NDLDL LTP
Sbjct: 121 PASDET-SEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNKLNDLDLRLTP 180

Query: 181 ----KSTCRRAGTPSMNSDESETTTCFDSAALAD--LRHY-------ERKLLNLFV 221
               KST RRA TPSMNS+ESETTTCF+S  L D   RHY       ERKLLNLFV
Sbjct: 181 TFPAKST-RRAATPSMNSEESETTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV 234

[Close]

BLAST of Sed0018143 vs. NCBI nr
Match: XP_023517275.1 (LOB domain-containing protein 37-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 377.1 bits (967), Expect = 1.0e-100
Identity = 199/236 (84.32%), Postives = 208/236 (88.14%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSESCILRPCLQWIDSAESQGHATVFVAKFFGRAGLMSFISAVPEPQR 60
           MSCNGCRVLRKGCSESCILRPCLQWID++E+QGHATVFVAKFFGRAGLMSFISAVPE QR
Sbjct: 1   MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNQFLHGGSPN 120
           PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMN+FL  GSPN
Sbjct: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNEFLAAGSPN 120

Query: 121 PASDETNSDAEVACSDMWKLRDSYPSSRFSNSRSRLSPKRKRSEESTN---NDLDLCLTP 180
           PASDET S+AEVAC+DMWKLRDSYP+SRFSNSRSRLSPKRKRSEEST    NDLDL LTP
Sbjct: 121 PASDET-SEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTP 180

Query: 181 ----KSTCRRAGTPSMNSDESETTTCFDSAALAD--LRHY-------ERKLLNLFV 221
               KST RRA TPSMNS+ESETTTCF+S  L D   RHY       ERKLLNLFV
Sbjct: 181 NFPAKST-RRAATPSMNSEESETTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV 234

[Close]

BLAST of Sed0018143 vs. NCBI nr
Match: XP_023003010.1 (LOB domain-containing protein 37-like [Cucurbita maxima])

HSP 1 Score: 377.1 bits (967), Expect = 1.0e-100
Identity = 196/236 (83.05%), Postives = 207/236 (87.71%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSESCILRPCLQWIDSAESQGHATVFVAKFFGRAGLMSFISAVPEPQR 60
           MSCNGCRVLRKGCSESCILRPCLQWID++E+QGHATVFVAKFFGRAGLMSFISAVPE QR
Sbjct: 1   MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNQFLHGGSPN 120
           PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMN+FL  GSPN
Sbjct: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNEFLAAGSPN 120

Query: 121 PASDETNSDAEVACSDMWKLRDSYPSSRFSNSRSRLSPKRKRSEESTN---NDLDLCLTP 180
           PASDET S+AEVAC+DMWKLRDSYP+SRFSNSRSRLSPKRKRSEEST    NDLDL LTP
Sbjct: 121 PASDET-SEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTP 180

Query: 181 ----KSTCRRAGTPSMNSDESETTTCFDSAALADLRHY---------ERKLLNLFV 221
               KST RRA TPSMNS+ESETTTCF+S  L D  H+         ERK+LNLFV
Sbjct: 181 NFPAKST-RRAATPSMNSEESETTTCFESGGLVDHHHHHYHPEELVPERKILNLFV 234

[Close]

BLAST of Sed0018143 vs. NCBI nr
Match: XP_022963426.1 (LOB domain-containing protein 37-like [Cucurbita moschata])

HSP 1 Score: 376.3 bits (965), Expect = 1.8e-100
Identity = 197/236 (83.47%), Postives = 206/236 (87.29%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSESCILRPCLQWIDSAESQGHATVFVAKFFGRAGLMSFISAVPEPQR 60
           MSCNGCRVLRKGCSESCILRPCLQWID++E+QGHATVFVAKFFGRAGLMSFISAVPE QR
Sbjct: 1   MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNQFLHGGSPN 120
           PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMN+FL  GSPN
Sbjct: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNEFLAAGSPN 120

Query: 121 PASDETNSDAEVACSDMWKLRDSYPSSRFSNSRSRLSPKRKRSEESTN---NDLDLCLTP 180
           PASDET S+AEVAC+DMWKLRDSYP+SRFSNSRSRLSPKRKRSEEST    NDLDL LTP
Sbjct: 121 PASDET-SEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTP 180

Query: 181 ----KSTCRRAGTPSMNSDESETTTCFDSAALADLRHY---------ERKLLNLFV 221
               KST RRA TPSMNS+ESETTTCF+S  L D  H          ERKLLNLFV
Sbjct: 181 NFPAKST-RRAATPSMNSEESETTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV 234

[Close]

BLAST of Sed0018143 vs. NCBI nr
Match: XP_008440364.1 (PREDICTED: LOB domain-containing protein 37-like [Cucumis melo] >TYK12824.1 LOB domain-containing protein 37-like [Cucumis melo var. makuwa])

HSP 1 Score: 358.2 bits (918), Expect = 5.0e-95
Identity = 186/234 (79.49%), Postives = 202/234 (86.32%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSESCILRPCLQWIDSAESQGHATVFVAKFFGRAGLMSFISAVPEPQR 60
           MSCNGCRVLRKGCSESCILRPCLQWID++E+QGHATVFVAKFFGRAGLMSFISAVPE QR
Sbjct: 1   MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNQFLHGGSPN 120
           PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWH+CQAAV+TVLRGGTLRP+N FL  GSPN
Sbjct: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVDTVLRGGTLRPINDFLAAGSPN 120

Query: 121 PASDETNSDAEVACSDMWKLRDSYPSSRFSNSRSRLSPKRKRSEESTN----NDLDLCLT 180
            ASD+T S+ EVAC+DMWK+RDSYP+SRFSNSRSRLSPKRKRSEES+     NDLDL LT
Sbjct: 121 LASDDT-SETEVACTDMWKIRDSYPNSRFSNSRSRLSPKRKRSEESSTKHQLNDLDLRLT 180

Query: 181 P----KSTCRRAGTPSMNSDESETTTCFDSAALADLRHY------ERKLLNLFV 221
           P    KST  RA TPSMNS+ESETTTCF+S    +  HY      +RKLLNLFV
Sbjct: 181 PTFPAKSTL-RAATPSMNSEESETTTCFESGLGDNHHHYPEEGTAQRKLLNLFV 232

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BLAST of Sed0018143 vs. ExPASy Swiss-Prot
Match: Q9FN11 (LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.2e-69
Identity = 148/250 (59.20%), Postives = 178/250 (71.20%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSESCILRPCLQWIDSAESQGHATVFVAKFFGRAGLMSFISAVPEPQR 60
           MSCNGCRVLRKGCSE+CILRPC+QWI++A++QGHATVFVAKFFGRAGLMSFISAVP+ QR
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNQFL-HGGSP 120
           P+LFQSLL+EACGRTVNPVNGA+G+LWTGNW+ICQAAVETVLRGG+LRP+ + L HGG  
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPIPELLTHGGGF 120

Query: 121 NPASDETNSDAEVACSDMWKL-------RDSYPSSRFSNSRSRLS------PKRKR--SE 180
                 T+ +A   C++M  L       R+ Y  SRFS+SRSR +       KRKR  SE
Sbjct: 121 AGFPSPTSEEASEICTEMLNLQQNDSTDRNIYHHSRFSSSRSRSTMDSSSPTKRKRLSSE 180

Query: 181 ESTNNDLDLCL---------TPKSTCRRAGTPSMNSDESETTT-----CFDSAALADLRH 221
           +  +++LDL L         TP ST RR+ TPSMNS++S TTT     C       +   
Sbjct: 181 DQPSSELDLSLIPNFPIKQATPSSTRRRSVTPSMNSEDSGTTTTTTAFCDKGDVYGNGGG 240

[Close]

BLAST of Sed0018143 vs. ExPASy Swiss-Prot
Match: Q9SN23 (LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.2e-67
Identity = 149/252 (59.13%), Postives = 175/252 (69.44%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSESCILRPCLQWIDSAESQGHATVFVAKFFGRAGLMSFISAVPEPQR 60
           MSCNGCRVLRKGCSE+CILRPC+QWI+S E+QGHATVFVAKFFGRAGLMSFISAVPE Q 
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNQFLHGGS-- 120
           P+LFQSLL+EACGRTVNPVNGAVGLLWTGNW++CQAAVETVLRGG+L+P+ + L+GG   
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFA 120

Query: 121 --PNPASDETNSDAEVACSDMWKLRDS--------YPSSRFSNSRSR-----LSPKRKR- 180
             P+P SDE    A   C++M  LR +        Y   RFS+SRSR       PKRKR 
Sbjct: 121 GFPSPTSDE----ASEICTEMLNLRKADDSGDRNIYHHCRFSSSRSRSRSTASPPKRKRL 180

Query: 181 -SEESTNNDLDLCLTP----KSTCRRAGTPSMNSDESETTTCFDSAALADLRHYER---- 220
            SE+  +++LDL L P    K+   +  TPSM S+ES TT  F +    D   Y R    
Sbjct: 181 SSEQQPSSELDLSLIPIYPIKTLPFKEDTPSMYSEESVTTVSFQNNNAGD--RYVRCGGG 240

[Close]

BLAST of Sed0018143 vs. ExPASy Swiss-Prot
Match: Q9SZE8 (LOB domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=LBD39 PE=2 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 6.2e-64
Identity = 140/248 (56.45%), Postives = 166/248 (66.94%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSESCILRPCLQWIDSAESQGHATVFVAKFFGRAGLMSFISAVPEPQR 60
           MSCNGCRVLRKGCSE+CILRPCLQWI+SAESQGHATVFVAKFFGRAGLMSFIS+VPE QR
Sbjct: 1   MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNQFLHGGSPN 120
           P+LFQSLLFEACGRTVNPVNGAVG+LWT NWH+CQAAVETVLRGGTLRP++  L   S  
Sbjct: 61  PALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPISDLLESPSLM 120

Query: 121 PASDETNSDAEVACSDMWK---LRDSYPSSRFSNSRSRLSPK-----RKRSEESTNNDLD 180
            + DE+        S++W     R+     RFS SRS    K     RKR +  ++ DL 
Sbjct: 121 ISCDES--------SEIWHQDVSRNQTHHCRFSTSRSTTEMKDSLVNRKRLKSDSDLDLQ 180

Query: 181 L--------------CLTPKSTCR--RAGTPSMNSDESETTTCFDSAALADLRHY----E 221
           +               L P S C+  +   P   S+ES TT+C+++    D +      E
Sbjct: 181 VNHGLTLTAPAVPVPFLPPSSFCKVVKGDRPGSPSEESVTTSCWENGMRGDNKQKRNKGE 240

[Close]

BLAST of Sed0018143 vs. ExPASy Swiss-Prot
Match: Q9ZW96 (LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.4e-44
Identity = 76/110 (69.09%), Postives = 96/110 (87.27%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSESCILRPCLQWIDSAESQGHATVFVAKFFGRAGLMSFISAVPEPQR 60
           MSCNGCRVLRKGCSE+C +RPCLQWI SAESQ +ATVF+AKF+GRAGLM+ ++  P+  R
Sbjct: 3   MSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDHLR 62

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPM 111
           P++F+SLL+EACGR VNP+ G+VGLLW+GNWH+CQAAVE V+RG  + P+
Sbjct: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPI 112

[Close]

BLAST of Sed0018143 vs. ExPASy Swiss-Prot
Match: Q9CA30 (LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 6.9e-39
Identity = 68/104 (65.38%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSESCILRPCLQWIDSAESQGHATVFVAKFFGRAGLMSFISAVPEPQR 60
           +SCNGCRVLRKGC++ C +RPCLQWI SA+SQ +AT+F+AKF+GRAGL++ I + P+  R
Sbjct: 3   ISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDHLR 62

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRG 105
           P++F+SLL+EACGR VNPV+G+VGL+W+GNW  CQAAV+ VL G
Sbjct: 63  PAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNG 106

[Close]

BLAST of Sed0018143 vs. ExPASy TrEMBL
Match: A0A6J1KQK8 (LOB domain-containing protein 37-like OS=Cucurbita maxima OX=3661 GN=LOC111496753 PE=3 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 5.0e-101
Identity = 196/236 (83.05%), Postives = 207/236 (87.71%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSESCILRPCLQWIDSAESQGHATVFVAKFFGRAGLMSFISAVPEPQR 60
           MSCNGCRVLRKGCSESCILRPCLQWID++E+QGHATVFVAKFFGRAGLMSFISAVPE QR
Sbjct: 1   MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNQFLHGGSPN 120
           PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMN+FL  GSPN
Sbjct: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNEFLAAGSPN 120

Query: 121 PASDETNSDAEVACSDMWKLRDSYPSSRFSNSRSRLSPKRKRSEESTN---NDLDLCLTP 180
           PASDET S+AEVAC+DMWKLRDSYP+SRFSNSRSRLSPKRKRSEEST    NDLDL LTP
Sbjct: 121 PASDET-SEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTP 180

Query: 181 ----KSTCRRAGTPSMNSDESETTTCFDSAALADLRHY---------ERKLLNLFV 221
               KST RRA TPSMNS+ESETTTCF+S  L D  H+         ERK+LNLFV
Sbjct: 181 NFPAKST-RRAATPSMNSEESETTTCFESGGLVDHHHHHYHPEELVPERKILNLFV 234

[Close]

BLAST of Sed0018143 vs. ExPASy TrEMBL
Match: A0A6J1HG39 (LOB domain-containing protein 37-like OS=Cucurbita moschata OX=3662 GN=LOC111463636 PE=3 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 8.6e-101
Identity = 197/236 (83.47%), Postives = 206/236 (87.29%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSESCILRPCLQWIDSAESQGHATVFVAKFFGRAGLMSFISAVPEPQR 60
           MSCNGCRVLRKGCSESCILRPCLQWID++E+QGHATVFVAKFFGRAGLMSFISAVPE QR
Sbjct: 1   MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNQFLHGGSPN 120
           PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMN+FL  GSPN
Sbjct: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNEFLAAGSPN 120

Query: 121 PASDETNSDAEVACSDMWKLRDSYPSSRFSNSRSRLSPKRKRSEESTN---NDLDLCLTP 180
           PASDET S+AEVAC+DMWKLRDSYP+SRFSNSRSRLSPKRKRSEEST    NDLDL LTP
Sbjct: 121 PASDET-SEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTP 180

Query: 181 ----KSTCRRAGTPSMNSDESETTTCFDSAALADLRHY---------ERKLLNLFV 221
               KST RRA TPSMNS+ESETTTCF+S  L D  H          ERKLLNLFV
Sbjct: 181 NFPAKST-RRAATPSMNSEESETTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV 234

[Close]

BLAST of Sed0018143 vs. ExPASy TrEMBL
Match: A0A5D3CP44 (LOB domain-containing protein 37-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004160 PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.4e-95
Identity = 186/234 (79.49%), Postives = 202/234 (86.32%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSESCILRPCLQWIDSAESQGHATVFVAKFFGRAGLMSFISAVPEPQR 60
           MSCNGCRVLRKGCSESCILRPCLQWID++E+QGHATVFVAKFFGRAGLMSFISAVPE QR
Sbjct: 1   MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNQFLHGGSPN 120
           PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWH+CQAAV+TVLRGGTLRP+N FL  GSPN
Sbjct: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVDTVLRGGTLRPINDFLAAGSPN 120

Query: 121 PASDETNSDAEVACSDMWKLRDSYPSSRFSNSRSRLSPKRKRSEESTN----NDLDLCLT 180
            ASD+T S+ EVAC+DMWK+RDSYP+SRFSNSRSRLSPKRKRSEES+     NDLDL LT
Sbjct: 121 LASDDT-SETEVACTDMWKIRDSYPNSRFSNSRSRLSPKRKRSEESSTKHQLNDLDLRLT 180

Query: 181 P----KSTCRRAGTPSMNSDESETTTCFDSAALADLRHY------ERKLLNLFV 221
           P    KST  RA TPSMNS+ESETTTCF+S    +  HY      +RKLLNLFV
Sbjct: 181 PTFPAKSTL-RAATPSMNSEESETTTCFESGLGDNHHHYPEEGTAQRKLLNLFV 232

[Close]

BLAST of Sed0018143 vs. ExPASy TrEMBL
Match: A0A1S3B1K4 (LOB domain-containing protein 37-like OS=Cucumis melo OX=3656 GN=LOC103484839 PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.4e-95
Identity = 186/234 (79.49%), Postives = 202/234 (86.32%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSESCILRPCLQWIDSAESQGHATVFVAKFFGRAGLMSFISAVPEPQR 60
           MSCNGCRVLRKGCSESCILRPCLQWID++E+QGHATVFVAKFFGRAGLMSFISAVPE QR
Sbjct: 1   MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNQFLHGGSPN 120
           PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWH+CQAAV+TVLRGGTLRP+N FL  GSPN
Sbjct: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVDTVLRGGTLRPINDFLAAGSPN 120

Query: 121 PASDETNSDAEVACSDMWKLRDSYPSSRFSNSRSRLSPKRKRSEESTN----NDLDLCLT 180
            ASD+T S+ EVAC+DMWK+RDSYP+SRFSNSRSRLSPKRKRSEES+     NDLDL LT
Sbjct: 121 LASDDT-SETEVACTDMWKIRDSYPNSRFSNSRSRLSPKRKRSEESSTKHQLNDLDLRLT 180

Query: 181 P----KSTCRRAGTPSMNSDESETTTCFDSAALADLRHY------ERKLLNLFV 221
           P    KST  RA TPSMNS+ESETTTCF+S    +  HY      +RKLLNLFV
Sbjct: 181 PTFPAKSTL-RAATPSMNSEESETTTCFESGLGDNHHHYPEEGTAQRKLLNLFV 232

[Close]

BLAST of Sed0018143 vs. ExPASy TrEMBL
Match: A0A6J1BUC0 (LOB domain-containing protein 38-like OS=Momordica charantia OX=3673 GN=LOC111005616 PE=3 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 3.2e-95
Identity = 190/237 (80.17%), Postives = 205/237 (86.50%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSESCILRPCLQWIDSAESQGHATVFVAKFFGRAGLMSFISAVPEPQR 60
           MSCNGCRVLRKGCSESCILRPCLQWID++E+QGHATVFVAKFFGRAGLMSFISAVP+ QR
Sbjct: 1   MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPQSQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNQFLHGGSPN 120
           PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWH+CQAAVETVLRGGTLRPMN+FL GG   
Sbjct: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPMNEFLAGG--G 120

Query: 121 PASDETNSDAEVACSDMWKLRDSYPSSRFSNSRSRLSPKRKRS-EESTN----NDLDLCL 180
             SDET+S+AEVAC+DMWKLRDSYP+SRFSNSRSRLSPKRKRS +EST     NDLDL L
Sbjct: 121 SPSDETSSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSDQESTTKQQLNDLDLRL 180

Query: 181 TP----KSTCRRAGTPSMNSDESETTTCFDSAALADLRHY--------ERKLLNLFV 221
           TP    KST RRAGTPSMNS+ESETTTCF+S  L D  H+        +RKLLNLFV
Sbjct: 181 TPIFPAKST-RRAGTPSMNSEESETTTCFES-GLGDHHHHQYPQPEGGQRKLLNLFV 233

[Close]

BLAST of Sed0018143 vs. TAIR 10
Match: AT5G67420.1 (LOB domain-containing protein 37 )

HSP 1 Score: 263.5 bits (672), Expect = 1.6e-70
Identity = 148/250 (59.20%), Postives = 178/250 (71.20%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSESCILRPCLQWIDSAESQGHATVFVAKFFGRAGLMSFISAVPEPQR 60
           MSCNGCRVLRKGCSE+CILRPC+QWI++A++QGHATVFVAKFFGRAGLMSFISAVP+ QR
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNQFL-HGGSP 120
           P+LFQSLL+EACGRTVNPVNGA+G+LWTGNW+ICQAAVETVLRGG+LRP+ + L HGG  
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPIPELLTHGGGF 120

Query: 121 NPASDETNSDAEVACSDMWKL-------RDSYPSSRFSNSRSRLS------PKRKR--SE 180
                 T+ +A   C++M  L       R+ Y  SRFS+SRSR +       KRKR  SE
Sbjct: 121 AGFPSPTSEEASEICTEMLNLQQNDSTDRNIYHHSRFSSSRSRSTMDSSSPTKRKRLSSE 180

Query: 181 ESTNNDLDLCL---------TPKSTCRRAGTPSMNSDESETTT-----CFDSAALADLRH 221
           +  +++LDL L         TP ST RR+ TPSMNS++S TTT     C       +   
Sbjct: 181 DQPSSELDLSLIPNFPIKQATPSSTRRRSVTPSMNSEDSGTTTTTTAFCDKGDVYGNGGG 240

[Close]

BLAST of Sed0018143 vs. TAIR 10
Match: AT3G49940.1 (LOB domain-containing protein 38 )

HSP 1 Score: 257.7 bits (657), Expect = 8.6e-69
Identity = 149/252 (59.13%), Postives = 175/252 (69.44%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSESCILRPCLQWIDSAESQGHATVFVAKFFGRAGLMSFISAVPEPQR 60
           MSCNGCRVLRKGCSE+CILRPC+QWI+S E+QGHATVFVAKFFGRAGLMSFISAVPE Q 
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNQFLHGGS-- 120
           P+LFQSLL+EACGRTVNPVNGAVGLLWTGNW++CQAAVETVLRGG+L+P+ + L+GG   
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFA 120

Query: 121 --PNPASDETNSDAEVACSDMWKLRDS--------YPSSRFSNSRSR-----LSPKRKR- 180
             P+P SDE    A   C++M  LR +        Y   RFS+SRSR       PKRKR 
Sbjct: 121 GFPSPTSDE----ASEICTEMLNLRKADDSGDRNIYHHCRFSSSRSRSRSTASPPKRKRL 180

Query: 181 -SEESTNNDLDLCLTP----KSTCRRAGTPSMNSDESETTTCFDSAALADLRHYER---- 220
            SE+  +++LDL L P    K+   +  TPSM S+ES TT  F +    D   Y R    
Sbjct: 181 SSEQQPSSELDLSLIPIYPIKTLPFKEDTPSMYSEESVTTVSFQNNNAGD--RYVRCGGG 240

[Close]

BLAST of Sed0018143 vs. TAIR 10
Match: AT4G37540.1 (LOB domain-containing protein 39 )

HSP 1 Score: 245.4 bits (625), Expect = 4.4e-65
Identity = 140/248 (56.45%), Postives = 166/248 (66.94%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSESCILRPCLQWIDSAESQGHATVFVAKFFGRAGLMSFISAVPEPQR 60
           MSCNGCRVLRKGCSE+CILRPCLQWI+SAESQGHATVFVAKFFGRAGLMSFIS+VPE QR
Sbjct: 1   MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNQFLHGGSPN 120
           P+LFQSLLFEACGRTVNPVNGAVG+LWT NWH+CQAAVETVLRGGTLRP++  L   S  
Sbjct: 61  PALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPISDLLESPSLM 120

Query: 121 PASDETNSDAEVACSDMWK---LRDSYPSSRFSNSRSRLSPK-----RKRSEESTNNDLD 180
            + DE+        S++W     R+     RFS SRS    K     RKR +  ++ DL 
Sbjct: 121 ISCDES--------SEIWHQDVSRNQTHHCRFSTSRSTTEMKDSLVNRKRLKSDSDLDLQ 180

Query: 181 L--------------CLTPKSTCR--RAGTPSMNSDESETTTCFDSAALADLRHY----E 221
           +               L P S C+  +   P   S+ES TT+C+++    D +      E
Sbjct: 181 VNHGLTLTAPAVPVPFLPPSSFCKVVKGDRPGSPSEESVTTSCWENGMRGDNKQKRNKGE 240

[Close]

BLAST of Sed0018143 vs. TAIR 10
Match: AT1G67100.1 (LOB domain-containing protein 40 )

HSP 1 Score: 179.1 bits (453), Expect = 3.9e-45
Identity = 76/110 (69.09%), Postives = 96/110 (87.27%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSESCILRPCLQWIDSAESQGHATVFVAKFFGRAGLMSFISAVPEPQR 60
           MSCNGCRVLRKGCSE+C +RPCLQWI SAESQ +ATVF+AKF+GRAGLM+ ++  P+  R
Sbjct: 3   MSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDHLR 62

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPM 111
           P++F+SLL+EACGR VNP+ G+VGLLW+GNWH+CQAAVE V+RG  + P+
Sbjct: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPI 112

[Close]

BLAST of Sed0018143 vs. TAIR 10
Match: AT1G68510.1 (LOB domain-containing protein 42 )

HSP 1 Score: 162.2 bits (409), Expect = 4.9e-40
Identity = 68/104 (65.38%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSESCILRPCLQWIDSAESQGHATVFVAKFFGRAGLMSFISAVPEPQR 60
           +SCNGCRVLRKGC++ C +RPCLQWI SA+SQ +AT+F+AKF+GRAGL++ I + P+  R
Sbjct: 3   ISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDHLR 62

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRG 105
           P++F+SLL+EACGR VNPV+G+VGL+W+GNW  CQAAV+ VL G
Sbjct: 63  PAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNG 106

The following BLAST results are available for this feature:

BLAST of Sed0018143 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6594987.1	1.0e-100	84.32	LOB domain-containing protein 38, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_023517275.1	1.0e-100	84.32	LOB domain-containing protein 37-like [Cucurbita pepo subsp. pepo]	[more]
XP_023003010.1	1.0e-100	83.05	LOB domain-containing protein 37-like [Cucurbita maxima]	[more]
XP_022963426.1	1.8e-100	83.47	LOB domain-containing protein 37-like [Cucurbita moschata]	[more]
XP_008440364.1	5.0e-95	79.49	PREDICTED: LOB domain-containing protein 37-like [Cucumis melo] >TYK12824.1 LOB ...	[more]

BLAST of Sed0018143 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FN11	2.2e-69	59.20	LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 S...	[more]
Q9SN23	1.2e-67	59.13	LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 S...	[more]
Q9SZE8	6.2e-64	56.45	LOB domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=LBD39 PE=2 S...	[more]
Q9ZW96	5.4e-44	69.09	LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 S...	[more]
Q9CA30	6.9e-39	65.38	LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 S...	[more]

BLAST of Sed0018143 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KQK8	5.0e-101	83.05	LOB domain-containing protein 37-like OS=Cucurbita maxima OX=3661 GN=LOC11149675...	[more]
A0A6J1HG39	8.6e-101	83.47	LOB domain-containing protein 37-like OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]
A0A5D3CP44	2.4e-95	79.49	LOB domain-containing protein 37-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3B1K4	2.4e-95	79.49	LOB domain-containing protein 37-like OS=Cucumis melo OX=3656 GN=LOC103484839 PE...	[more]
A0A6J1BUC0	3.2e-95	80.17	LOB domain-containing protein 38-like OS=Momordica charantia OX=3673 GN=LOC11100...	[more]

BLAST of Sed0018143 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67420.1	1.6e-70	59.20	LOB domain-containing protein 37	[more]
AT3G49940.1	8.6e-69	59.13	LOB domain-containing protein 38	[more]
AT4G37540.1	4.4e-65	56.45	LOB domain-containing protein 39	[more]
AT1G67100.1	3.9e-45	69.09	LOB domain-containing protein 40	[more]
AT1G68510.1	4.9e-40	65.38	LOB domain-containing protein 42	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 2..101 e-value: 3.4E-25 score: 88.5
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 1..107 score: 19.721771
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..171
None	No IPR available	PANTHER	PTHR31304:SF36	LOB DOMAIN-CONTAINING PROTEIN	coord: 1..220
None	No IPR available	PANTHER	PTHR31304	LOB DOMAIN-CONTAINING PROTEIN 38	coord: 1..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018143.1	Sed0018143.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression