Sed0018138 (gene) Chayote v1

Overview
NameSed0018138
Typegene
OrganismSechium edule (Chayote v1)
DescriptionMucin-17 like
LocationLG09: 3346796 .. 3347338 (+)
RNA-Seq ExpressionSed0018138
SyntenySed0018138
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAAGATCAAAGTTCATCCATCACCGCCTTCTTCTTCTTCTTCCTCCGCCGCCGCCACCGCCGCCGTGATTCCTTCTTCTCCGTATATGGACTACTCCGCCGTACTAAACCAACTTCCGGCGGAGATTCTGCCCCTTCTCGACCCTCTGACCGTCGGCGACTTCGAGGTCTTGGCCTTCATGATCAAAAGCTCAATGCCGGCGAAGAAACGTCCCAAGAGGTTCTGGAAGAGACCCGGTTCTCCACGCGCCCGTCCCGACGGCTCGTGTCGTCACGCGCCGCCGAGGTTTCGGTGTTTTTACTGTCTCGGGAGTTACTGGGAGCGGTGGATCTCGTCGCCGAACCGGGAGTTGATTGATCGGGCCATGGCGGCTTTTGATGCCCGATTCGAACCCTTTATTCCGCCGGTTGCGGAGACGGCGGCGGTTGGTGTTCCGTCGCCGGCGAGGAGAAATGGCGGGGGTTTGGCGCGGAGGGTTTGGCCGGACGTGTTGGGGTTATTCAATTCTCGTTTATGGAGGTTTTGGGGTCCAAATTAG

mRNA sequence

ATGAGGAAGATCAAAGTTCATCCATCACCGCCTTCTTCTTCTTCTTCCTCCGCCGCCGCCACCGCCGCCGTGATTCCTTCTTCTCCGTATATGGACTACTCCGCCGTACTAAACCAACTTCCGGCGGAGATTCTGCCCCTTCTCGACCCTCTGACCGTCGGCGACTTCGAGGTCTTGGCCTTCATGATCAAAAGCTCAATGCCGGCGAAGAAACGTCCCAAGAGGTTCTGGAAGAGACCCGGTTCTCCACGCGCCCGTCCCGACGGCTCGTGTCGTCACGCGCCGCCGAGGTTTCGGTGTTTTTACTGTCTCGGGAGTTACTGGGAGCGGTGGATCTCGTCGCCGAACCGGGAGTTGATTGATCGGGCCATGGCGGCTTTTGATGCCCGATTCGAACCCTTTATTCCGCCGGTTGCGGAGACGGCGGCGGTTGGTGTTCCGTCGCCGGCGAGGAGAAATGGCGGGGGTTTGGCGCGGAGGGTTTGGCCGGACGTGTTGGGGTTATTCAATTCTCGTTTATGGAGGTTTTGGGGTCCAAATTAG

Coding sequence (CDS)

ATGAGGAAGATCAAAGTTCATCCATCACCGCCTTCTTCTTCTTCTTCCTCCGCCGCCGCCACCGCCGCCGTGATTCCTTCTTCTCCGTATATGGACTACTCCGCCGTACTAAACCAACTTCCGGCGGAGATTCTGCCCCTTCTCGACCCTCTGACCGTCGGCGACTTCGAGGTCTTGGCCTTCATGATCAAAAGCTCAATGCCGGCGAAGAAACGTCCCAAGAGGTTCTGGAAGAGACCCGGTTCTCCACGCGCCCGTCCCGACGGCTCGTGTCGTCACGCGCCGCCGAGGTTTCGGTGTTTTTACTGTCTCGGGAGTTACTGGGAGCGGTGGATCTCGTCGCCGAACCGGGAGTTGATTGATCGGGCCATGGCGGCTTTTGATGCCCGATTCGAACCCTTTATTCCGCCGGTTGCGGAGACGGCGGCGGTTGGTGTTCCGTCGCCGGCGAGGAGAAATGGCGGGGGTTTGGCGCGGAGGGTTTGGCCGGACGTGTTGGGGTTATTCAATTCTCGTTTATGGAGGTTTTGGGGTCCAAATTAG

Protein sequence

MRKIKVHPSPPSSSSSSAAATAAVIPSSPYMDYSAVLNQLPAEILPLLDPLTVGDFEVLAFMIKSSMPAKKRPKRFWKRPGSPRARPDGSCRHAPPRFRCFYCLGSYWERWISSPNRELIDRAMAAFDARFEPFIPPVAETAAVGVPSPARRNGGGLARRVWPDVLGLFNSRLWRFWGPN
Homology
BLAST of Sed0018138 vs. NCBI nr
Match: KAG6576126.1 (hypothetical protein SDJN03_26765, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 137.9 bits (346), Expect = 8.7e-29
Identity = 96/254 (37.80%), Postives = 119/254 (46.85%), Query Frame = 0

Query: 3   KIKVHPSPPSSSSSSAAATAAVIPSSPYMDYSAVLNQLPAEILPLLDPLTVGDFEVLAFM 62
           K KVHPSP SSSSSS++++     SS   D+  V N LP  +L L+  LTV D EVLAFM
Sbjct: 6   KGKVHPSPSSSSSSSSSSS-----SSSDGDFFEVFNYLPVAMLALISLLTVDDREVLAFM 65

Query: 63  IKSSM---------PAKKRPKRFWKRPGSPRARPDGSCRHAPPRFRCFYCLGSYWERWIS 122
           ++ SM            K  KR  K+  +PRA    +C H+PP F CF C  SYW+RW S
Sbjct: 66  MRRSMETSSTSSFVSGNKFSKRAPKKSTAPRASSGSACVHSPPSFTCFDCYMSYWDRWNS 125

Query: 123 SPNRELIDRAMAAFDARF------------------------------EPFIPPVA---- 181
           SPN ELI +A+ AF+ +                                P +PP+     
Sbjct: 126 SPNGELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQSSDKPVNVVAPPLPPLPEVLP 185

BLAST of Sed0018138 vs. NCBI nr
Match: KAG6592803.1 (hypothetical protein SDJN03_12279, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 135.2 bits (339), Expect = 5.6e-28
Identity = 97/253 (38.34%), Postives = 110/253 (43.48%), Query Frame = 0

Query: 3   KIKVHPSPPSSSSSSAAATAAVIPSSPYMDYSAVLNQLPAEILPLLDPLTVGDFEVLAFM 62
           K KVHPSP SSSSSS+             D+  V N LPA IL LL  LT+ D EVLAFM
Sbjct: 6   KGKVHPSPSSSSSSSSDG-----------DFFDVFNYLPAAILALLTVLTIDDREVLAFM 65

Query: 63  IK---------SSMPAKKRPKRFWKRPGSPRARPDGSCRHAPPRFRCFYCLGSYWERWIS 122
           ++         SS+   K  KR  K+ G+PRA     C HAPP   CF C  SYW RW S
Sbjct: 66  MRRSMETSTPSSSLSENKFSKRGSKKSGAPRANSGSVCVHAPPSLSCFDCYMSYWNRWNS 125

Query: 123 SPNRELIDRAMAAFDARF-----------------------------EPFIPP------- 181
           SPN ELI +A+ AF+ +                               P  PP       
Sbjct: 126 SPNGELIHQAIEAFEEQLANGEKSGKNIKGKRKDKIGRRSSEKPVDVSPLSPPPLPEVLP 185

BLAST of Sed0018138 vs. NCBI nr
Match: KAG7014644.1 (hypothetical protein SDJN02_24823, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 135.2 bits (339), Expect = 5.6e-28
Identity = 94/254 (37.01%), Postives = 115/254 (45.28%), Query Frame = 0

Query: 3   KIKVHPSPPSSSSSSAAATAAVIPSSPYMDYSAVLNQLPAEILPLLDPLTVGDFEVLAFM 62
           K KVHPSP SSSSSS+++           D+  V N LP  +L L+  LTV D EVLAFM
Sbjct: 6   KGKVHPSPSSSSSSSSSSDG---------DFFEVFNYLPVAMLALISLLTVDDREVLAFM 65

Query: 63  IKSSM---------PAKKRPKRFWKRPGSPRARPDGSCRHAPPRFRCFYCLGSYWERWIS 122
           ++ SM            K  KR  K+   PRA    +C H+PP F CF C  SYW+RW S
Sbjct: 66  MRRSMETSSTSSFVSGNKFSKRAPKKSTDPRASSGSACVHSPPSFTCFDCYMSYWDRWNS 125

Query: 123 SPNRELIDRAMAAFDARF------------------------------EPFIPPVA---- 181
           SPN ELI +A+ AF+ +                                P +PP+     
Sbjct: 126 SPNGELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQSSDKPVNVVAPPLPPLPEVLP 185

BLAST of Sed0018138 vs. NCBI nr
Match: KGN46456.2 (hypothetical protein Csa_005246 [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 9.6e-28
Identity = 95/263 (36.12%), Postives = 119/263 (45.25%), Query Frame = 0

Query: 3   KIKVHPSPPSSSSSSAAATAAVIPSSPYMDYSAVLNQLPAEILPLLDPLTVGDFEVLAFM 62
           K KVHPSP SSSSSS++++++   SS   ++  VLN LP  I  L+  LTV D EVLAFM
Sbjct: 6   KGKVHPSPSSSSSSSSSSSSSSSSSSSDGNFFDVLNYLPVAIFALISVLTVDDREVLAFM 65

Query: 63  IK---------SSMPAKKRPKRFWKRPGSPRARPDGSCRHAPPRFRCFYCLGSYWERWIS 122
           ++         SS+  KK  KR  K+  +PRA    +C HAPP   CF C  SYW+RW S
Sbjct: 66  MRRSMETSSPSSSVSGKKFSKRVSKKSDAPRAGSHSACVHAPPSLTCFDCYMSYWDRWNS 125

Query: 123 SPNRELIDRAMAAFDARF------------------------------EPFIPPVAET-- 181
           SPN ELI +A+ AF+ +                                P + PV ET  
Sbjct: 126 SPNGELIHQAIEAFEEQLAKGEKSSKNVKGKRKDKISRRSLDKSLNIVSPPLLPVPETHP 185

BLAST of Sed0018138 vs. NCBI nr
Match: XP_022953880.1 (uncharacterized protein LOC111456285 [Cucurbita moschata])

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-27
Identity = 94/254 (37.01%), Postives = 115/254 (45.28%), Query Frame = 0

Query: 3   KIKVHPSPPSSSSSSAAATAAVIPSSPYMDYSAVLNQLPAEILPLLDPLTVGDFEVLAFM 62
           K KVHPSP SSSSSS++            D+  V N LP  +L L+  LTV D EVLAFM
Sbjct: 6   KGKVHPSPSSSSSSSSSDG----------DFFEVFNYLPVAMLALISLLTVDDREVLAFM 65

Query: 63  IKSSM---------PAKKRPKRFWKRPGSPRARPDGSCRHAPPRFRCFYCLGSYWERWIS 122
           ++ SM            K  KR  K+  +PRA    +C H+PP F CF C  SYW+RW S
Sbjct: 66  MRRSMETSSTSSFVSGNKFSKRAPKKSTAPRASSGSACVHSPPSFTCFDCYMSYWDRWNS 125

Query: 123 SPNRELIDRAMAAFDARF------------------------------EPFIPPVA---- 181
           SPN ELI +A+ AF+ +                                P +PP+     
Sbjct: 126 SPNGELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQSSDKPVNVVAPPLPPLPGVLP 185

BLAST of Sed0018138 vs. ExPASy TrEMBL
Match: A0A6J1GQW4 (uncharacterized protein LOC111456285 OS=Cucurbita moschata OX=3662 GN=LOC111456285 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 6.1e-28
Identity = 94/254 (37.01%), Postives = 115/254 (45.28%), Query Frame = 0

Query: 3   KIKVHPSPPSSSSSSAAATAAVIPSSPYMDYSAVLNQLPAEILPLLDPLTVGDFEVLAFM 62
           K KVHPSP SSSSSS++            D+  V N LP  +L L+  LTV D EVLAFM
Sbjct: 6   KGKVHPSPSSSSSSSSSDG----------DFFEVFNYLPVAMLALISLLTVDDREVLAFM 65

Query: 63  IKSSM---------PAKKRPKRFWKRPGSPRARPDGSCRHAPPRFRCFYCLGSYWERWIS 122
           ++ SM            K  KR  K+  +PRA    +C H+PP F CF C  SYW+RW S
Sbjct: 66  MRRSMETSSTSSFVSGNKFSKRAPKKSTAPRASSGSACVHSPPSFTCFDCYMSYWDRWNS 125

Query: 123 SPNRELIDRAMAAFDARF------------------------------EPFIPPVA---- 181
           SPN ELI +A+ AF+ +                                P +PP+     
Sbjct: 126 SPNGELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQSSDKPVNVVAPPLPPLPGVLP 185

BLAST of Sed0018138 vs. ExPASy TrEMBL
Match: A0A6J1H8S8 (uncharacterized protein LOC111461129 OS=Cucurbita moschata OX=3662 GN=LOC111461129 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.8e-27
Identity = 96/253 (37.94%), Postives = 108/253 (42.69%), Query Frame = 0

Query: 3   KIKVHPSPPSSSSSSAAATAAVIPSSPYMDYSAVLNQLPAEILPLLDPLTVGDFEVLAFM 62
           K KVHPSP SS SSS+             D+  V N LPA IL LL  LT+ D EVLAFM
Sbjct: 6   KGKVHPSPSSSPSSSSDG-----------DFFDVFNYLPAAILALLTVLTIDDREVLAFM 65

Query: 63  IKSSMPA---------KKRPKRFWKRPGSPRARPDGSCRHAPPRFRCFYCLGSYWERWIS 122
           ++ SM            K  KR  K+ G+PRA     C HAPP   CF C  SYW RW S
Sbjct: 66  MRRSMETSTPSSSPSENKFSKRGSKKSGAPRANSGSVCVHAPPSLSCFDCYMSYWNRWNS 125

Query: 123 SPNRELIDRAMAAFDARF-----------------------------EPFIPP------- 181
           SPN ELI +A+ AF+ +                               P  PP       
Sbjct: 126 SPNGELIHQAIEAFEEQLANGEKSGKNIKCKRKDKIGRRSSEKPVDVAPLSPPPLPEVLP 185

BLAST of Sed0018138 vs. ExPASy TrEMBL
Match: A0A6J1JUQ5 (uncharacterized protein LOC111488030 OS=Cucurbita maxima OX=3661 GN=LOC111488030 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 6.7e-27
Identity = 93/250 (37.20%), Postives = 108/250 (43.20%), Query Frame = 0

Query: 3   KIKVHPSPPSSSSSSAAATAAVIPSSPYMDYSAVLNQLPAEILPLLDPLTVGDFEVLAFM 62
           K KVHPSP SSSS                D+  V N LP  IL L+  LT  D EVLAFM
Sbjct: 6   KGKVHPSPSSSSSDG--------------DFFEVFNYLPVAILALISVLTADDREVLAFM 65

Query: 63  IKSSM---------PAKKRPKRFWKRPGSPRARPDGSCRHAPPRFRCFYCLGSYWERWIS 122
           ++ SM            K  KR  K+  +PRA    +C H+PP F CF C  SYW+RW S
Sbjct: 66  MRRSMETSSTSSVVSGNKFSKRAPKKSTAPRASSGSACVHSPPSFTCFDCYMSYWDRWNS 125

Query: 123 SPNRELIDRAMAAFDARF------------------------------EPFIPPVA---- 180
           SPN ELI +A+ AF+ +                                P +P V     
Sbjct: 126 SPNGELIHQAIEAFEEQLANGEKSCKNVKGKKREKIGRQSSDKPVNVVAPPLPEVLPLPI 185

BLAST of Sed0018138 vs. ExPASy TrEMBL
Match: A0A5D3DM01 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002230 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 4.4e-26
Identity = 95/259 (36.68%), Postives = 114/259 (44.02%), Query Frame = 0

Query: 3   KIKVHPSPPSSSSSSAAATAAVIPSSPYMDYSAVLNQLPAEILPLLDPLTVGDFEVLAFM 62
           K KVHPSP SSSSSS+        SS   ++  VLN LP  I  L+  LTV D EVLAFM
Sbjct: 6   KGKVHPSPSSSSSSSS--------SSSDGNFFDVLNYLPVAIFALVSVLTVDDREVLAFM 65

Query: 63  IK---------SSMPAKKRPKRFWKRPGSPRARPDGSCRHAPPRFRCFYCLGSYWERWIS 122
           ++         SS+  K+  KR  K+  +PRA    +C HAPP   CF C  SYW+RW S
Sbjct: 66  MRRSMETSSPSSSVSGKRFSKRVSKKSDTPRAGSRSACVHAPPSLTCFDCYMSYWDRWNS 125

Query: 123 SPNRELIDRAMAAFDARF------------------------------EPFIPPVAET-- 181
           SPN ELI +A+ AF+ +                                P + PV ET  
Sbjct: 126 SPNGELIHQAIEAFEEQLAKGEKSSKNVKGKRKDKIGRRSLDKSLNIVSPPLFPVPETHP 185

BLAST of Sed0018138 vs. ExPASy TrEMBL
Match: A0A1S3CC21 (uncharacterized protein LOC103499074 OS=Cucumis melo OX=3656 GN=LOC103499074 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 5.7e-26
Identity = 94/259 (36.29%), Postives = 113/259 (43.63%), Query Frame = 0

Query: 3   KIKVHPSPPSSSSSSAAATAAVIPSSPYMDYSAVLNQLPAEILPLLDPLTVGDFEVLAFM 62
           K KVHPSP SSSSSS++            ++  VLN LP  I  L+  LTV D EVLAFM
Sbjct: 6   KGKVHPSPSSSSSSSSSDG----------NFFDVLNYLPVAIFALVSVLTVDDREVLAFM 65

Query: 63  IK---------SSMPAKKRPKRFWKRPGSPRARPDGSCRHAPPRFRCFYCLGSYWERWIS 122
           ++         SS+  KK  KR  K+  +PRA    +C HAPP   CF C  SYW+RW S
Sbjct: 66  MRRSMETSSPSSSVSGKKFSKRVSKKSDTPRAGSRSACVHAPPSLTCFDCYMSYWDRWNS 125

Query: 123 SPNRELIDRAMAAFDARF------------------------------EPFIPPVAET-- 181
           SPN ELI +A+ AF+ +                                P + PV ET  
Sbjct: 126 SPNGELIHQAIEAFEEQLAKGEKSSKNVKGKRKDKIGRRSLDKSLNIVSPPLLPVPETHP 185

BLAST of Sed0018138 vs. TAIR 10
Match: AT5G13090.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 79.0 bits (193), Expect = 4.5e-15
Identity = 75/265 (28.30%), Postives = 101/265 (38.11%), Query Frame = 0

Query: 2   RKIKVHPSPPSSSSSSAAATAAVIPSSPYMDYSAVLNQLPAEILPLLDPLTVGDFEVLAF 61
           +K KV+PSPP    SS++++++   +    D  +VL  LPA IL L+  L+  + EVLA+
Sbjct: 5   KKGKVYPSPPPPPQSSSSSSSSNHLNEEDDDSLSVLKLLPATILVLVSVLSSEEREVLAY 64

Query: 62  MIKSSMPAKKRPKRFWKRPGSPRARPDGSCRHAPPRF--RCFYCLGSYWERWISSPNREL 121
           +I        R     K     ++    S  H PP F   CF C  +YW RW SSPNREL
Sbjct: 65  LITRGTTISDRGNSSSKNKTKKKSN-KSSKNHKPPVFDCECFDCYTNYWFRWDSSPNREL 124

Query: 122 IDRAMAAF-------------------------------------------DARFEPFIP 181
           I   + AF                                           D   +P + 
Sbjct: 125 IHEIIEAFENHHGEENSASRSKSKRGKKKEKPGRRVTDSDSKPALRVTDNGDKDSKPVVE 184

BLAST of Sed0018138 vs. TAIR 10
Match: AT1G24270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13090.1); Has 84 Blast hits to 83 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 9.6e-10
Identity = 47/130 (36.15%), Postives = 62/130 (47.69%), Query Frame = 0

Query: 1   MRKIKVHPSPPSSSSSSAAATAAVIPSSPYMDYSAVLNQLPAEILPLLDPLTVGDFEVLA 60
           M+K KVHPSPP  SSSS+             D  +V   L + IL L+  L+  D EVLA
Sbjct: 58  MKKGKVHPSPPLPSSSSSNGD----------DSLSVFKLLQSAILVLVSVLSAEDLEVLA 117

Query: 61  FMIKSSMPAKKRPKRFWKRPGSPRARPDGSCRHAPPRF--RCFYCLGSYWERWISSPNRE 120
           ++I  S+          KR             H  P    +CF C  SYW +W SS NRE
Sbjct: 118 YLITRSLNTTNVVSCKKKR------------SHKAPLLDCQCFDCYTSYWSKWDSSSNRE 165

Query: 121 LIDRAMAAFD 129
           LI++ + AF+
Sbjct: 178 LINQIIEAFE 165

BLAST of Sed0018138 vs. TAIR 10
Match: AT1G62422.1 (unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12020.1); Has 87 Blast hits to 86 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 54.7 bits (130), Expect = 9.0e-08
Identity = 42/133 (31.58%), Postives = 59/133 (44.36%), Query Frame = 0

Query: 2   RKIKVHPSPPSSSSSSAAATAAVIPSSPYMDYSAVLNQLPAEILPLLDPLTVGDFEVLAF 61
           RK  VHPSPP +  +                    L+ LP  IL L+  L+V D EVLA+
Sbjct: 6   RKGTVHPSPPPAIKTD----------------EQFLSLLPVAILSLVAALSVEDREVLAY 65

Query: 62  MIKSSMPAKKRPKRFWKRPGSPRARPDGSCRHAPPRF--RCFYCLGSYWERWISSPNREL 121
           +I +S  + +            R + +    H  P F   CF C  SYW RW +SP R+L
Sbjct: 66  LISNSGDSNR----------ISRLKKNKEDNHHSPLFLCDCFSCYTSYWVRWDTSPRRQL 112

Query: 122 IDRAMAAFDARFE 133
           I   + A++   E
Sbjct: 126 IHEIIDAYEDSLE 112

BLAST of Sed0018138 vs. TAIR 10
Match: AT1G12020.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62422.1); Has 89 Blast hits to 88 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 52.0 bits (123), Expect = 5.8e-07
Identity = 43/133 (32.33%), Postives = 58/133 (43.61%), Query Frame = 0

Query: 2   RKIKVHPSPPSSSSSSAAATAAVIPSSPYMDYSAVLNQLPAEILPLLDPLTVGDFEVLAF 61
           RK  VHPSPP   S+                   +L  LP  I  L   L+  D EVLA+
Sbjct: 6   RKGTVHPSPPQIKSN-----------------DHLLTLLPVAIFSLAAVLSPEDREVLAY 65

Query: 62  MIKSSMPAKKRPKRFWKRPGSPRARPDGSCRHAPPRFR--CFYCLGSYWERWISSPNREL 121
           +I ++  + +R      R    +A       +  P F   CF C  SYW RW SSP+R+L
Sbjct: 66  LISTASYSGERNPT--SRLNKTKAHKKALFDNHSPLFHCDCFSCYTSYWVRWDSSPSRQL 119

Query: 122 IDRAMAAFDARFE 133
           I   + AF+   E
Sbjct: 126 IHEIIDAFEDSLE 119

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6576126.18.7e-2937.80hypothetical protein SDJN03_26765, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6592803.15.6e-2838.34hypothetical protein SDJN03_12279, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7014644.15.6e-2837.01hypothetical protein SDJN02_24823, partial [Cucurbita argyrosperma subsp. argyro... [more]
KGN46456.29.6e-2836.12hypothetical protein Csa_005246 [Cucumis sativus][more]
XP_022953880.11.3e-2737.01uncharacterized protein LOC111456285 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1GQW46.1e-2837.01uncharacterized protein LOC111456285 OS=Cucurbita moschata OX=3662 GN=LOC1114562... [more]
A0A6J1H8S81.8e-2737.94uncharacterized protein LOC111461129 OS=Cucurbita moschata OX=3662 GN=LOC1114611... [more]
A0A6J1JUQ56.7e-2737.20uncharacterized protein LOC111488030 OS=Cucurbita maxima OX=3661 GN=LOC111488030... [more]
A0A5D3DM014.4e-2636.68Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CC215.7e-2636.29uncharacterized protein LOC103499074 OS=Cucumis melo OX=3656 GN=LOC103499074 PE=... [more]
Match NameE-valueIdentityDescription
AT5G13090.14.5e-1528.30unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G24270.19.6e-1036.15unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G62422.19.0e-0831.58unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth ... [more]
AT1G12020.15.8e-0732.33unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31903:SF4OS02G0507600 PROTEINcoord: 2..129
NoneNo IPR availablePANTHERPTHR31903:SF4OS02G0507600 PROTEINcoord: 150..180
NoneNo IPR availablePANTHERPTHR31903F12F1.11-RELATEDcoord: 2..129
NoneNo IPR availablePANTHERPTHR31903F12F1.11-RELATEDcoord: 150..180

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0018138.1Sed0018138.1mRNA