Sed0018106 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTGGAAAGAAAGAAACTCAAGGCTTTTTTATGGCAAGCATATCAACAAACTTTCCAATACTATATGGGAATCCATCATCATTAATATGGCTTCGTGGTGTTATAAATCCTCTTTATTTAAAGATTACAATATTGCTTCCATTGCATTAAACTGGAATGCATTTTTGTAAAATCGCATGCTTCTTGCATGCTTTTGGAATGAATCGTATCATTTTCCAAAAAAAAAAGAATTCTATTATTGATAGAATTCAATCAATGACAGACTGATTCTATCACTGGTTGAGTTTTAGAAATCTAAATTGAATTATATCACTAATTGAACAATAGAAATCAATTAGTTATAGATGAATTATTTTAAAAATTATACCTCAAATATAATAGAGGTAGAATGTGCTACTGAAATTCTCTTTTCTAAAGTGGAAGGTATTTGAATAAAAATATATTATTTAGATTTTAAAAAATGTCAATCTTTATAATTATTTCCACAATTTATCTTATGAATATAATATTTTGAACTTTGACTTAGGCTGGATTAAATATGTTTTTTGTATGGAAAAATAAATTTAAAATGATTGCATTTGCATTTGACACAACTCAACCCTATACTTTTAAATTGGATTGAGTTTTTAGTATTTATCTTTCCTTTATAACAATTCTATATATGTTTCATAAATATATAAATATTATATTTGAATTTTAGATTAACTATTTTATTAGTGATATTATTTAAAAACGTATCTTATTAATCGATTTTTCTTCTTATATATAATACTCAATTATTATTCCAAGCCTTTATTACTATGAGCATCAAATATTTATGACCCCACTTTATTTATTTACTTTTATTTTTCTTTTCAAATTTTCTTAAACCCAAAAAGAAAAAGAAAAATTTGGAGCTTGGGCAGCAAGTAACTCAAACAAAATCTCTCCGTGAAAAAAAAATCAGTATATATAGCGATTTCGCAACACAGCGGAAAAAAAAAAAAAAAAAAAAAAACGAAGCGGAAACAGGAAGAGGAAGATATGAACAATTTTTCTGATTCTTGTTGCGGTATTATAAATCTTCAACTTTTTCAAGTTCTAATAATAATAATATTAATGTTAATTACATTCTAATTTTGAATCCCTAATTTCTTTTTTCAGTTGTAAGGTCCAGCAGATATGAAAAACCAGTCCATTATACCTTACAAATCCAATCTTTTTCCTTGCTCGCAGCCTCTCTTGCTAAACCCAACAATGATAGATATGAATCTCAGTGCTTCAATGCCTGCGGTTATAAATGGTGGGGTTTTCGTTTTATGTCGAACTATGCTGACCCACGATTACTTATTGCGGTTATGTTCTCGTATTGGACTTTTACTTATTCAGTGTTGTATTAGGGTTTGTATGAGCACTATATAAATCTCTTATTAACATGTGGCCTGAAGACTTGGACTTTGAAGGTATACTCTTTTTAAGGTCCAAGGTTTGAGACTCATGTGTGGTATTATTGCTTCAATGTCTCTCGGTACCTGACCTAGGGATAGATGTGCTTGCCCCTGAAACAAATCATCATGGAGTGGCTTAATGAAAGTCTTTGAGTACTTAAGGTGATAAGTTTAATCTATGGTGACCACCTACCTACGTAGAATTAATTTCTTACATGCTTCCTTGACATTCTTATATTGGAGAGTCAGGCGCTATGTTTGGTGGCAAGCTGGCCGGACACTCTGGATATCAAAAAAAGAAAGAAAAGAAAAGAAAAACCCCAAGACATTTGTGTTATTATCTTCTTAATAAAATAGTTCTTCCTCCCTCTATGGTTGAAAATAGTTTTCATGTAAATCGTCGTGTTTTGTCTCTGGTTTCTTTTTCCAATTTTTGTAACATTATATCCTCGTTAACTTATGGAAGATGTTATTATTTTACTTATTTTAGTTTTGTTGATATACTGGTTTGTTTGTTTGTTTGTTTGTTGTAGGAAATTAGCTCTGTATCCTAATGGGGATGTGAAAAGAAAAGGGTCTGATCATATCTCTCTCTATTTGGTATCTGCTGAGGACAAAGTTGTATCTTCTAATTCAGAGGTCAATGTTGTGTTTACCTTTCTGGTTTATGATAATTTCAAAGACAAGTATTTGACAATCCAAGGTAAACACATGTTTATTTTTTTAATTTAATTTGTTTCCTTTCTATGATGTTTTGCAATTTCATTATAGGTTAAAATGTAAATTTATTTTGTAACTGTTCTTCATGTTTATGTCTACTCGTTCCTTGACTTCGAAAGTTTTTAAATATGTCATTGATCTTTAAAGGTTCTGTCTAGCATATTAACCATCGTGGATTCATCTAGTAGTCAAATTAGGCATGAAAATCAAGTATTAAAAAGGATGAGTTGAATCCAATAATGTTTTGGCAATAAAGTAAATATAAATATAGTAGCGGTTGAGGAAAGAACACTTGTAAACAAGGATTATAGTCAAGGCCTCTCTCCTTAACAGCCGAGCTAGTTGACCTTAACCTTTACATTAACCTCGTAACTTCTCGAAATCACGAAAGCTCTTTAAGAGTTTTAAAGCAGCCGAGCTTCTTTTTCTTCTCCTCTACAACTCTTGAACTCGGGTAAAGTAGCTTTTGTACCAATCCGTCTTTGGACTTCTTAAGAATAGTGAATCACTACTCTCATTAACATCATTTAACCAACCTGGCAACTGTTGAACGTTGGACTACTTGTTGAAGAATTAAAGTACATCGAACCCGTATTTAGTTTTACCATGAGCAGATTGAATTCATTGGAAAAATGTGAGAAAGATTAAGATTACTTTCTCGGAAGTATCGAAAACAAGATAATGGTCACCTACTTGAAACAAGTAACCTTGACAACTAAATGTTTGTAGAGTAAGATGCTTATTCATAAGCTAACCCAACTCTCATTCAACTCTGTGTATAATAAGATTTTAAACTTTCAAACTTAACAAAAAAAAGTTCATACCTATTCTATTAGTATACAAGTTAGGTTAGGGGTACAAAATTCAAATCCCCTAATGTTGTTAATGCTACTGAAATAAAAAAAATATAGAATTAAAAGCTTAGACACTAAATCTATAATTTAAGAATTTATTAGCCCCATTTGAAAAGCTTAAGAAACTTATTTGACATGGAGTAATTTGTCACTTGATCTTGATTTTATTCAGATGGGAAAATAAGGCGTTTTCATGCAATGAAGAGAGAGTGGGGATATGAAAAGTTGATTTCACTTGCGAGTTTCAACGATGCTTCAAATGGATTCTTGGTGAATGATCATTGTGCATTTGGAGTCGACATTTTTGTAAAGAAAGGTGATGAAGGGAAGAGGGAGGCTCTTTCCTTTGTAAAGCAACCAACAAATGGAAAGTATACATGGAAAATCAACAACTTTTCACTATTACCTCATAACATTTATACTTTATCTGATCCTTTTACAGTGGACTGCTACAATTGGTATGCAAAATTTTTATCTACAAATATTTTAGAAACACTCTGTAGTTTGGTCATTTACACATCTCTCTATCTTTCAGGAAACTGGCTCTACAATATCTCAAACCAAATGATGACTTTTTGTCATTGTACCGAGTTTTGATGGTTTGAAAGGGCTTCCCCAAATTTCTACTAAGGTGTATGCTGAATTTGACATTGCTGTGTTGAGTCAACTTGATCAAGTTGCACCAATCACAAGAACGCGTAATTAATTAGCAACCGTTTTAATCATAATAATAATAATAATTTCTGAAGCTATTCCTTCAAATCTTGATTCTTAAGAGTGTAATTAAGTTGAACTTTTCTGTGTGCAGAAAGCTATTGGTTTGAGTTTGGAAAACTATCTGCTTGGGGTACTCCAAAATTTATGCCCGTAAGCTATCTCGAGGAACCAACCAAAGGCTTTCTTCGTAATGATACATTGATTATTGAACTGAAGATTAATGTTATGTCCACCTTGAAAGATTTTTTGTAGAAGGGCATTGCTGTCTTTTGAAGATGTGTGTATAGTGAAAGCTAAGTAGAACTGAACATTTGAGTTTTGGTAACATTTTGAGTTGCATCCTGTGTTATCACTCTGCTAGTTGTAATCAGGGTATATGTACTCATTTTCAAACTTATCTATATAGGTGACAATAAGTGTAGTTAAGAATATGTACAAATTTATTCTTGTTTGTTACTATTATTTTTGTCAGTTTTATCTCTTTCATTCAAACTTAGTAGAATGTCATCATATTCAGCATCGCCTGTAAGCATAGTTATGTTCTGGCATTAAAAGGAAAAAGAGAGGGAATGAACATAGACAGTAACAATGTTTTAAAAGGCAGCGCGCCTAGCTGTGCCTAGGTGCAAGGTGCGAGACAAGTGCCTCGTCTCCAAGGTGAGGTGTGCGCCTCTTGGCACTTTTTGTGAAGCCGTGGGGTGCATTAAGGCATGTACCTTATGGGCTTTTTGTGTTGTATGTGCTTTTACTTTTACCTAAAATAACTTCATCTATATCTTAAAAAACTTAATTCTTTAACTCATATAGATAACTTTCACTTTATTTCGTTTTTTCTCTCCTCCACAACTTATATTCTCCCGCTTCTCTAGCCACACGTTATCTAATTCTCCATCCACACCACCATCCATGAGTTCTTTTTTTTTTTTGAGAATATCCATGAGTTCATCTTTGCAACATTATGGTCAAAAGTTAAAAGTTGAATTGAATCTTGGGTATGTTTCATATATTATTCTTGATTAAAAGTTACTTGAAATGAAGGTTAATAGATGAATTTAAAGTATGTTTAATATATTATTCTTAGTTAAACTTCATCTCTTTCCATGA ATGTTTGGAAAGAAAGAAACTCAAGGCTTTTTTATGGCAAGCATATCAACAAACTTTCCAATACTATATGGGAATCCATCATCATTAATATGGCTTCGTGTTGTAAGGTCCAGCAGATATGAAAAACCAGTCCATTATACCTTACAAATCCAATCTTTTTCCTTGCTCGCAGCCTCTCTTGCTAAACCCAACAATGATAGATATGAATCTCAGTGCTTCAATGCCTGCGGTTATAAATGGAAATTAGCTCTGTATCCTAATGGGGATGTGAAAAGAAAAGGGTCTGATCATATCTCTCTCTATTTGGTATCTGCTGAGGACAAAGTTGTATCTTCTAATTCAGAGGTCAATGTTGTGTTTACCTTTCTGGTTTATGATAATTTCAAAGACAAGTATTTGACAATCCAAGATGGGAAAATAAGGCGTTTTCATGCAATGAAGAGAGAGTGGGGATATGAAAAGTTGATTTCACTTGCGAGTTTCAACGATGCTTCAAATGGATTCTTGGTGAATGATCATTGTGCATTTGGAGTCGACATTTTTGTAAAGAAAGGTGATGAAGGGAAGAGGGAGGCTCTTTCCTTTGTAAAGCAACCAACAAATGGAAAGTATACATGGAAAATCAACAACTTTTCACTATTACCTCATAACATTTATACTTTATCTGATCCTTTTACAGTGGACTGCTACAATTGTATGTTTAATATATTATTCTTAGTTAAACTTCATCTCTTTCCATGA ATGTTTGGAAAGAAAGAAACTCAAGGCTTTTTTATGGCAAGCATATCAACAAACTTTCCAATACTATATGGGAATCCATCATCATTAATATGGCTTCGTGTTGTAAGGTCCAGCAGATATGAAAAACCAGTCCATTATACCTTACAAATCCAATCTTTTTCCTTGCTCGCAGCCTCTCTTGCTAAACCCAACAATGATAGATATGAATCTCAGTGCTTCAATGCCTGCGGTTATAAATGGAAATTAGCTCTGTATCCTAATGGGGATGTGAAAAGAAAAGGGTCTGATCATATCTCTCTCTATTTGGTATCTGCTGAGGACAAAGTTGTATCTTCTAATTCAGAGGTCAATGTTGTGTTTACCTTTCTGGTTTATGATAATTTCAAAGACAAGTATTTGACAATCCAAGATGGGAAAATAAGGCGTTTTCATGCAATGAAGAGAGAGTGGGGATATGAAAAGTTGATTTCACTTGCGAGTTTCAACGATGCTTCAAATGGATTCTTGGTGAATGATCATTGTGCATTTGGAGTCGACATTTTTGTAAAGAAAGGTGATGAAGGGAAGAGGGAGGCTCTTTCCTTTGTAAAGCAACCAACAAATGGAAAGTATACATGGAAAATCAACAACTTTTCACTATTACCTCATAACATTTATACTTTATCTGATCCTTTTACAGTGGACTGCTACAATTGTATGTTTAATATATTATTCTTAGTTAAACTTCATCTCTTTCCATGA MFGKKETQGFFMASISTNFPILYGNPSSLIWLRVVRSSRYEKPVHYTLQIQSFSLLAASLAKPNNDRYESQCFNACGYKWKLALYPNGDVKRKGSDHISLYLVSAEDKVVSSNSEVNVVFTFLVYDNFKDKYLTIQDGKIRRFHAMKREWGYEKLISLASFNDASNGFLVNDHCAFGVDIFVKKGDEGKREALSFVKQPTNGKYTWKINNFSLLPHNIYTLSDPFTVDCYNCMFNILFLVKLHLFP Homology
BLAST of Sed0018106 vs. NCBI nr
Match: XP_022146381.1 (ubiquitin carboxyl-terminal hydrolase 13-like [Momordica charantia]) HSP 1 Score: 279.3 bits (713), Expect = 3.3e-71 Identity = 141/208 (67.79%), Postives = 162/208 (77.88%), Query Frame = 0
BLAST of Sed0018106 vs. NCBI nr
Match: XP_038874970.1 (uncharacterized protein LOC120067490 [Benincasa hispida]) HSP 1 Score: 266.2 bits (679), Expect = 2.9e-67 Identity = 132/210 (62.86%), Postives = 162/210 (77.14%), Query Frame = 0
BLAST of Sed0018106 vs. NCBI nr
Match: KAE8648447.1 (hypothetical protein Csa_008888 [Cucumis sativus]) HSP 1 Score: 257.7 bits (657), Expect = 1.0e-64 Identity = 135/228 (59.21%), Postives = 159/228 (69.74%), Query Frame = 0
BLAST of Sed0018106 vs. NCBI nr
Match: XP_022146382.1 (uncharacterized protein LOC111015610 [Momordica charantia]) HSP 1 Score: 255.4 bits (651), Expect = 5.1e-64 Identity = 123/185 (66.49%), Postives = 147/185 (79.46%), Query Frame = 0
BLAST of Sed0018106 vs. NCBI nr
Match: XP_038875772.1 (uncharacterized protein LOC120068142 [Benincasa hispida]) HSP 1 Score: 253.1 bits (645), Expect = 2.5e-63 Identity = 130/215 (60.47%), Postives = 156/215 (72.56%), Query Frame = 0
BLAST of Sed0018106 vs. ExPASy Swiss-Prot
Match: Q9M2I9 (MATH domain and coiled-coil domain-containing protein At3g58270 OS=Arabidopsis thaliana OX=3702 GN=At3g58270 PE=2 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 3.5e-07 Identity = 35/130 (26.92%), Postives = 59/130 (45.38%), Query Frame = 0
BLAST of Sed0018106 vs. ExPASy Swiss-Prot
Match: Q9M2J1 (MATH domain and coiled-coil domain-containing protein At3g58250 OS=Arabidopsis thaliana OX=3702 GN=At3g58250 PE=4 SV=2) HSP 1 Score: 53.5 bits (127), Expect = 3.9e-06 Identity = 34/132 (25.76%), Postives = 62/132 (46.97%), Query Frame = 0
BLAST of Sed0018106 vs. ExPASy TrEMBL
Match: A0A6J1CZ69 (ubiquitin carboxyl-terminal hydrolase 13-like OS=Momordica charantia OX=3673 GN=LOC111015609 PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 1.6e-71 Identity = 141/208 (67.79%), Postives = 162/208 (77.88%), Query Frame = 0
BLAST of Sed0018106 vs. ExPASy TrEMBL
Match: A0A0A0KND8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G432550 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 5.0e-65 Identity = 135/228 (59.21%), Postives = 159/228 (69.74%), Query Frame = 0
BLAST of Sed0018106 vs. ExPASy TrEMBL
Match: A0A6J1CZF7 (uncharacterized protein LOC111015610 OS=Momordica charantia OX=3673 GN=LOC111015610 PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 2.5e-64 Identity = 123/185 (66.49%), Postives = 147/185 (79.46%), Query Frame = 0
BLAST of Sed0018106 vs. ExPASy TrEMBL
Match: A0A6J1CYF6 (uncharacterized protein LOC111015611 OS=Momordica charantia OX=3673 GN=LOC111015611 PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 1.1e-61 Identity = 123/199 (61.81%), Postives = 151/199 (75.88%), Query Frame = 0
BLAST of Sed0018106 vs. ExPASy TrEMBL
Match: A0A5D3BGH9 (MATH domain and coiled-coil domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00850 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 1.7e-60 Identity = 123/200 (61.50%), Postives = 152/200 (76.00%), Query Frame = 0
BLAST of Sed0018106 vs. TAIR 10
Match: AT3G17380.1 (TRAF-like family protein ) HSP 1 Score: 173.3 bits (438), Expect = 2.4e-43 Identity = 88/196 (44.90%), Postives = 120/196 (61.22%), Query Frame = 0
BLAST of Sed0018106 vs. TAIR 10
Match: AT5G26280.1 (TRAF-like family protein ) HSP 1 Score: 142.1 bits (357), Expect = 5.9e-34 Identity = 83/229 (36.24%), Postives = 124/229 (54.15%), Query Frame = 0
BLAST of Sed0018106 vs. TAIR 10
Match: AT2G04170.1 (TRAF-like family protein ) HSP 1 Score: 139.8 bits (351), Expect = 2.9e-33 Identity = 76/190 (40.00%), Postives = 110/190 (57.89%), Query Frame = 0
BLAST of Sed0018106 vs. TAIR 10
Match: AT2G04170.2 (TRAF-like family protein ) HSP 1 Score: 139.8 bits (351), Expect = 2.9e-33 Identity = 76/190 (40.00%), Postives = 110/190 (57.89%), Query Frame = 0
BLAST of Sed0018106 vs. TAIR 10
Match: AT2G04170.3 (TRAF-like family protein ) HSP 1 Score: 139.8 bits (351), Expect = 2.9e-33 Identity = 76/190 (40.00%), Postives = 110/190 (57.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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