Sed0018106 (gene) Chayote v1

Overview
NameSed0018106
Typegene
OrganismSechium edule (Chayote v1)
DescriptionTRAF-like family protein
LocationLG11: 30998112 .. 31002936 (-)
RNA-Seq ExpressionSed0018106
SyntenySed0018106
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGGAAAGAAAGAAACTCAAGGCTTTTTTATGGCAAGCATATCAACAAACTTTCCAATACTATATGGGAATCCATCATCATTAATATGGCTTCGTGGTGTTATAAATCCTCTTTATTTAAAGATTACAATATTGCTTCCATTGCATTAAACTGGAATGCATTTTTGTAAAATCGCATGCTTCTTGCATGCTTTTGGAATGAATCGTATCATTTTCCAAAAAAAAAAGAATTCTATTATTGATAGAATTCAATCAATGACAGACTGATTCTATCACTGGTTGAGTTTTAGAAATCTAAATTGAATTATATCACTAATTGAACAATAGAAATCAATTAGTTATAGATGAATTATTTTAAAAATTATACCTCAAATATAATAGAGGTAGAATGTGCTACTGAAATTCTCTTTTCTAAAGTGGAAGGTATTTGAATAAAAATATATTATTTAGATTTTAAAAAATGTCAATCTTTATAATTATTTCCACAATTTATCTTATGAATATAATATTTTGAACTTTGACTTAGGCTGGATTAAATATGTTTTTTGTATGGAAAAATAAATTTAAAATGATTGCATTTGCATTTGACACAACTCAACCCTATACTTTTAAATTGGATTGAGTTTTTAGTATTTATCTTTCCTTTATAACAATTCTATATATGTTTCATAAATATATAAATATTATATTTGAATTTTAGATTAACTATTTTATTAGTGATATTATTTAAAAACGTATCTTATTAATCGATTTTTCTTCTTATATATAATACTCAATTATTATTCCAAGCCTTTATTACTATGAGCATCAAATATTTATGACCCCACTTTATTTATTTACTTTTATTTTTCTTTTCAAATTTTCTTAAACCCAAAAAGAAAAAGAAAAATTTGGAGCTTGGGCAGCAAGTAACTCAAACAAAATCTCTCCGTGAAAAAAAAATCAGTATATATAGCGATTTCGCAACACAGCGGAAAAAAAAAAAAAAAAAAAAAAACGAAGCGGAAACAGGAAGAGGAAGATATGAACAATTTTTCTGATTCTTGTTGCGGTATTATAAATCTTCAACTTTTTCAAGTTCTAATAATAATAATATTAATGTTAATTACATTCTAATTTTGAATCCCTAATTTCTTTTTTCAGTTGTAAGGTCCAGCAGATATGAAAAACCAGTCCATTATACCTTACAAATCCAATCTTTTTCCTTGCTCGCAGCCTCTCTTGCTAAACCCAACAATGATAGATATGAATCTCAGTGCTTCAATGCCTGCGGTTATAAATGGTGGGGTTTTCGTTTTATGTCGAACTATGCTGACCCACGATTACTTATTGCGGTTATGTTCTCGTATTGGACTTTTACTTATTCAGTGTTGTATTAGGGTTTGTATGAGCACTATATAAATCTCTTATTAACATGTGGCCTGAAGACTTGGACTTTGAAGGTATACTCTTTTTAAGGTCCAAGGTTTGAGACTCATGTGTGGTATTATTGCTTCAATGTCTCTCGGTACCTGACCTAGGGATAGATGTGCTTGCCCCTGAAACAAATCATCATGGAGTGGCTTAATGAAAGTCTTTGAGTACTTAAGGTGATAAGTTTAATCTATGGTGACCACCTACCTACGTAGAATTAATTTCTTACATGCTTCCTTGACATTCTTATATTGGAGAGTCAGGCGCTATGTTTGGTGGCAAGCTGGCCGGACACTCTGGATATCAAAAAAAGAAAGAAAAGAAAAGAAAAACCCCAAGACATTTGTGTTATTATCTTCTTAATAAAATAGTTCTTCCTCCCTCTATGGTTGAAAATAGTTTTCATGTAAATCGTCGTGTTTTGTCTCTGGTTTCTTTTTCCAATTTTTGTAACATTATATCCTCGTTAACTTATGGAAGATGTTATTATTTTACTTATTTTAGTTTTGTTGATATACTGGTTTGTTTGTTTGTTTGTTTGTTGTAGGAAATTAGCTCTGTATCCTAATGGGGATGTGAAAAGAAAAGGGTCTGATCATATCTCTCTCTATTTGGTATCTGCTGAGGACAAAGTTGTATCTTCTAATTCAGAGGTCAATGTTGTGTTTACCTTTCTGGTTTATGATAATTTCAAAGACAAGTATTTGACAATCCAAGGTAAACACATGTTTATTTTTTTAATTTAATTTGTTTCCTTTCTATGATGTTTTGCAATTTCATTATAGGTTAAAATGTAAATTTATTTTGTAACTGTTCTTCATGTTTATGTCTACTCGTTCCTTGACTTCGAAAGTTTTTAAATATGTCATTGATCTTTAAAGGTTCTGTCTAGCATATTAACCATCGTGGATTCATCTAGTAGTCAAATTAGGCATGAAAATCAAGTATTAAAAAGGATGAGTTGAATCCAATAATGTTTTGGCAATAAAGTAAATATAAATATAGTAGCGGTTGAGGAAAGAACACTTGTAAACAAGGATTATAGTCAAGGCCTCTCTCCTTAACAGCCGAGCTAGTTGACCTTAACCTTTACATTAACCTCGTAACTTCTCGAAATCACGAAAGCTCTTTAAGAGTTTTAAAGCAGCCGAGCTTCTTTTTCTTCTCCTCTACAACTCTTGAACTCGGGTAAAGTAGCTTTTGTACCAATCCGTCTTTGGACTTCTTAAGAATAGTGAATCACTACTCTCATTAACATCATTTAACCAACCTGGCAACTGTTGAACGTTGGACTACTTGTTGAAGAATTAAAGTACATCGAACCCGTATTTAGTTTTACCATGAGCAGATTGAATTCATTGGAAAAATGTGAGAAAGATTAAGATTACTTTCTCGGAAGTATCGAAAACAAGATAATGGTCACCTACTTGAAACAAGTAACCTTGACAACTAAATGTTTGTAGAGTAAGATGCTTATTCATAAGCTAACCCAACTCTCATTCAACTCTGTGTATAATAAGATTTTAAACTTTCAAACTTAACAAAAAAAAGTTCATACCTATTCTATTAGTATACAAGTTAGGTTAGGGGTACAAAATTCAAATCCCCTAATGTTGTTAATGCTACTGAAATAAAAAAAATATAGAATTAAAAGCTTAGACACTAAATCTATAATTTAAGAATTTATTAGCCCCATTTGAAAAGCTTAAGAAACTTATTTGACATGGAGTAATTTGTCACTTGATCTTGATTTTATTCAGATGGGAAAATAAGGCGTTTTCATGCAATGAAGAGAGAGTGGGGATATGAAAAGTTGATTTCACTTGCGAGTTTCAACGATGCTTCAAATGGATTCTTGGTGAATGATCATTGTGCATTTGGAGTCGACATTTTTGTAAAGAAAGGTGATGAAGGGAAGAGGGAGGCTCTTTCCTTTGTAAAGCAACCAACAAATGGAAAGTATACATGGAAAATCAACAACTTTTCACTATTACCTCATAACATTTATACTTTATCTGATCCTTTTACAGTGGACTGCTACAATTGGTATGCAAAATTTTTATCTACAAATATTTTAGAAACACTCTGTAGTTTGGTCATTTACACATCTCTCTATCTTTCAGGAAACTGGCTCTACAATATCTCAAACCAAATGATGACTTTTTGTCATTGTACCGAGTTTTGATGGTTTGAAAGGGCTTCCCCAAATTTCTACTAAGGTGTATGCTGAATTTGACATTGCTGTGTTGAGTCAACTTGATCAAGTTGCACCAATCACAAGAACGCGTAATTAATTAGCAACCGTTTTAATCATAATAATAATAATAATTTCTGAAGCTATTCCTTCAAATCTTGATTCTTAAGAGTGTAATTAAGTTGAACTTTTCTGTGTGCAGAAAGCTATTGGTTTGAGTTTGGAAAACTATCTGCTTGGGGTACTCCAAAATTTATGCCCGTAAGCTATCTCGAGGAACCAACCAAAGGCTTTCTTCGTAATGATACATTGATTATTGAACTGAAGATTAATGTTATGTCCACCTTGAAAGATTTTTTGTAGAAGGGCATTGCTGTCTTTTGAAGATGTGTGTATAGTGAAAGCTAAGTAGAACTGAACATTTGAGTTTTGGTAACATTTTGAGTTGCATCCTGTGTTATCACTCTGCTAGTTGTAATCAGGGTATATGTACTCATTTTCAAACTTATCTATATAGGTGACAATAAGTGTAGTTAAGAATATGTACAAATTTATTCTTGTTTGTTACTATTATTTTTGTCAGTTTTATCTCTTTCATTCAAACTTAGTAGAATGTCATCATATTCAGCATCGCCTGTAAGCATAGTTATGTTCTGGCATTAAAAGGAAAAAGAGAGGGAATGAACATAGACAGTAACAATGTTTTAAAAGGCAGCGCGCCTAGCTGTGCCTAGGTGCAAGGTGCGAGACAAGTGCCTCGTCTCCAAGGTGAGGTGTGCGCCTCTTGGCACTTTTTGTGAAGCCGTGGGGTGCATTAAGGCATGTACCTTATGGGCTTTTTGTGTTGTATGTGCTTTTACTTTTACCTAAAATAACTTCATCTATATCTTAAAAAACTTAATTCTTTAACTCATATAGATAACTTTCACTTTATTTCGTTTTTTCTCTCCTCCACAACTTATATTCTCCCGCTTCTCTAGCCACACGTTATCTAATTCTCCATCCACACCACCATCCATGAGTTCTTTTTTTTTTTTGAGAATATCCATGAGTTCATCTTTGCAACATTATGGTCAAAAGTTAAAAGTTGAATTGAATCTTGGGTATGTTTCATATATTATTCTTGATTAAAAGTTACTTGAAATGAAGGTTAATAGATGAATTTAAAGTATGTTTAATATATTATTCTTAGTTAAACTTCATCTCTTTCCATGA

mRNA sequence

ATGTTTGGAAAGAAAGAAACTCAAGGCTTTTTTATGGCAAGCATATCAACAAACTTTCCAATACTATATGGGAATCCATCATCATTAATATGGCTTCGTGTTGTAAGGTCCAGCAGATATGAAAAACCAGTCCATTATACCTTACAAATCCAATCTTTTTCCTTGCTCGCAGCCTCTCTTGCTAAACCCAACAATGATAGATATGAATCTCAGTGCTTCAATGCCTGCGGTTATAAATGGAAATTAGCTCTGTATCCTAATGGGGATGTGAAAAGAAAAGGGTCTGATCATATCTCTCTCTATTTGGTATCTGCTGAGGACAAAGTTGTATCTTCTAATTCAGAGGTCAATGTTGTGTTTACCTTTCTGGTTTATGATAATTTCAAAGACAAGTATTTGACAATCCAAGATGGGAAAATAAGGCGTTTTCATGCAATGAAGAGAGAGTGGGGATATGAAAAGTTGATTTCACTTGCGAGTTTCAACGATGCTTCAAATGGATTCTTGGTGAATGATCATTGTGCATTTGGAGTCGACATTTTTGTAAAGAAAGGTGATGAAGGGAAGAGGGAGGCTCTTTCCTTTGTAAAGCAACCAACAAATGGAAAGTATACATGGAAAATCAACAACTTTTCACTATTACCTCATAACATTTATACTTTATCTGATCCTTTTACAGTGGACTGCTACAATTGTATGTTTAATATATTATTCTTAGTTAAACTTCATCTCTTTCCATGA

Coding sequence (CDS)

ATGTTTGGAAAGAAAGAAACTCAAGGCTTTTTTATGGCAAGCATATCAACAAACTTTCCAATACTATATGGGAATCCATCATCATTAATATGGCTTCGTGTTGTAAGGTCCAGCAGATATGAAAAACCAGTCCATTATACCTTACAAATCCAATCTTTTTCCTTGCTCGCAGCCTCTCTTGCTAAACCCAACAATGATAGATATGAATCTCAGTGCTTCAATGCCTGCGGTTATAAATGGAAATTAGCTCTGTATCCTAATGGGGATGTGAAAAGAAAAGGGTCTGATCATATCTCTCTCTATTTGGTATCTGCTGAGGACAAAGTTGTATCTTCTAATTCAGAGGTCAATGTTGTGTTTACCTTTCTGGTTTATGATAATTTCAAAGACAAGTATTTGACAATCCAAGATGGGAAAATAAGGCGTTTTCATGCAATGAAGAGAGAGTGGGGATATGAAAAGTTGATTTCACTTGCGAGTTTCAACGATGCTTCAAATGGATTCTTGGTGAATGATCATTGTGCATTTGGAGTCGACATTTTTGTAAAGAAAGGTGATGAAGGGAAGAGGGAGGCTCTTTCCTTTGTAAAGCAACCAACAAATGGAAAGTATACATGGAAAATCAACAACTTTTCACTATTACCTCATAACATTTATACTTTATCTGATCCTTTTACAGTGGACTGCTACAATTGTATGTTTAATATATTATTCTTAGTTAAACTTCATCTCTTTCCATGA

Protein sequence

MFGKKETQGFFMASISTNFPILYGNPSSLIWLRVVRSSRYEKPVHYTLQIQSFSLLAASLAKPNNDRYESQCFNACGYKWKLALYPNGDVKRKGSDHISLYLVSAEDKVVSSNSEVNVVFTFLVYDNFKDKYLTIQDGKIRRFHAMKREWGYEKLISLASFNDASNGFLVNDHCAFGVDIFVKKGDEGKREALSFVKQPTNGKYTWKINNFSLLPHNIYTLSDPFTVDCYNCMFNILFLVKLHLFP
Homology
BLAST of Sed0018106 vs. NCBI nr
Match: XP_022146381.1 (ubiquitin carboxyl-terminal hydrolase 13-like [Momordica charantia])

HSP 1 Score: 279.3 bits (713), Expect = 3.3e-71
Identity = 141/208 (67.79%), Postives = 162/208 (77.88%), Query Frame = 0

Query: 25  NPSSLIWLRVVRSSRYEKPVHYTLQIQSFSLLAASLAKPNNDRYESQCFNACGYKWKLAL 84
           +PSS     V+  +R EKP+HYTLQIQSFSLL  +LA  N DRYESQ FNA GYKWKLA+
Sbjct: 8   SPSSEAADSVLSFTRDEKPLHYTLQIQSFSLLKTALAASNCDRYESQIFNAGGYKWKLAV 67

Query: 85  YPNGDVKRKGSDHISLYLVSAEDKVVSSNSEVNVVFTFLVYDNFKDKYLTIQDGKIRRFH 144
           YPNGDVKR GSDHISLYLV AED +    SEVNVVFTFLVYDN  DKYL +QD K+RRFH
Sbjct: 68  YPNGDVKRNGSDHISLYLVKAEDGI--PTSEVNVVFTFLVYDNLNDKYLAVQDEKVRRFH 127

Query: 145 AMKREWGYEKLISLASFNDASNGFLVNDHCAFGVDIFVKKGDEGKREALSFVKQPTNGKY 204
           +++ EW +EKLISL +FND+SNGFLV D CAFGVDI VKK D GK E +SF+K+P N +Y
Sbjct: 128 SIQTEWEFEKLISLETFNDSSNGFLVGDCCAFGVDIVVKKCD-GKGEVVSFIKEPKNNEY 187

Query: 205 TWKINNFSLLPHNIYTLSDPFTVDCYNC 233
           TWK NNFS L  N+Y  SDPFTV+ Y C
Sbjct: 188 TWKTNNFSQLDKNMYE-SDPFTVEGYRC 211

BLAST of Sed0018106 vs. NCBI nr
Match: XP_038874970.1 (uncharacterized protein LOC120067490 [Benincasa hispida])

HSP 1 Score: 266.2 bits (679), Expect = 2.9e-67
Identity = 132/210 (62.86%), Postives = 162/210 (77.14%), Query Frame = 0

Query: 22  LYGNPSSLIWLRVVRSSRYEKPVHYTLQIQSFSLLAASLAKPN-NDRYESQCFNACGYKW 81
           ++ N +S +   V+R+SR EKP+HYTL+IQSFSLL A++A  +  +RYESQ F A GYKW
Sbjct: 17  IFNNENSSL---VIRTSRDEKPLHYTLKIQSFSLLKAAVAASSIRNRYESQIFKAGGYKW 76

Query: 82  KLALYPNGDVKRKGSDHISLYLVSAEDKVVSSNSEVNVVFTFLVYDNFKDKYLTIQDGKI 141
           KLALYPNGD KR  ++HISLYLVSAED++ SS  E+ V+  FLVYDN KD+Y TIQDGK+
Sbjct: 77  KLALYPNGDFKRNVANHISLYLVSAEDEISSSGLEIKVMIKFLVYDNLKDRYWTIQDGKV 136

Query: 142 RRFHAMKREWGYEKLISLASFNDASNGFLVNDHCAFGVDIFVKKGDEGKREALSFVKQPT 201
           R FHA+K+EWG+EKL+SL +FND SNG LV+D CAFGVD+ V K  +G  E LS +KQ  
Sbjct: 137 RCFHAIKKEWGFEKLVSLDTFNDTSNGLLVDDCCAFGVDVIVMKSYDGNNEILSLIKQLK 196

Query: 202 NGKYTWKINNFSLLPHNIYTLSDPFTVDCY 231
           N KYTWKINNFS L  N+Y  SDPFTVD Y
Sbjct: 197 NYKYTWKINNFSQLSKNVYE-SDPFTVDNY 222

BLAST of Sed0018106 vs. NCBI nr
Match: KAE8648447.1 (hypothetical protein Csa_008888 [Cucumis sativus])

HSP 1 Score: 257.7 bits (657), Expect = 1.0e-64
Identity = 135/228 (59.21%), Postives = 159/228 (69.74%), Query Frame = 0

Query: 19  FPILYGNPSSLIWLRVVRSSRYEKPVHYTLQIQSFSLLAASLAKPNNDRYESQCFNACGY 78
           FP  +G+  S     VV SSRYEKPVHY L+IQSFSLL   LA     R+ESQ FNA GY
Sbjct: 14  FPKSHGHDDSAS-ASVVTSSRYEKPVHYILKIQSFSLLKEGLACSPRQRFESQKFNAGGY 73

Query: 79  KWKLALYPNGDVKRKGSDHISLYLVSAEDKVVSSNSEVNVVFTFLVYDNFKDKYLTIQDG 138
           +WKLALYPNGD +R  SDHISLYLV   D ++S+ SEVN VFTFLVYD  + KYLT+QDG
Sbjct: 74  EWKLALYPNGDQRRDVSDHISLYLVMVGDNILSTTSEVNAVFTFLVYDTLRGKYLTVQDG 133

Query: 139 KIRRFHAMKREWGYEKLISLASFNDASNGFLVNDHCAFGVDIFVKKGDEGKREALSFVKQ 198
           K+RRF A K EWG EKL+ L +F DASNGFLV+D C FGVDIFV   D GK E  S ++Q
Sbjct: 134 KMRRFSATKTEWGIEKLLPLNTFKDASNGFLVDDCCVFGVDIFVMNSDVGKGEVFSLIEQ 193

Query: 199 PTNGKYTWKINNFSLLPHNIYTLSDPFTVDCYNCMFNILFLVKLHLFP 247
           P N KYTWK+NNFS L  ++    +PFTV+  NC +      K+ LFP
Sbjct: 194 PNNYKYTWKLNNFSKLDSSLRE-CNPFTVE--NCCW------KIRLFP 231

BLAST of Sed0018106 vs. NCBI nr
Match: XP_022146382.1 (uncharacterized protein LOC111015610 [Momordica charantia])

HSP 1 Score: 255.4 bits (651), Expect = 5.1e-64
Identity = 123/185 (66.49%), Postives = 147/185 (79.46%), Query Frame = 0

Query: 34  VVRSSRYEKPVHYTLQIQSFSLLAASLAKPNNDRYESQCFNACGYKWKLALYPNGDVKRK 93
           V+RS R EKP+HYTLQIQ FSLL  +LA  + DRYES  F+  G+KWKLA+YP+GDVKR 
Sbjct: 53  VLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRN 112

Query: 94  GSDHISLYLVSAEDKVVSSNSEVNVVFTFLVYDNFKDKYLTIQDGKIRRFHAMKREWGYE 153
           GS+HISLYLV+AED +     ++ VVFT LVYDN +D YL + DGK+RRFHAMK+EWG+E
Sbjct: 113 GSNHISLYLVTAEDDI--PTLDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFE 172

Query: 154 KLISLASFNDASNGFLVNDHCAFGVDIFVKKGDEGKREALSFVKQPTNGKYTWKINNFSL 213
           KL+SL +FND+SNGFLV+D CAFGVDIFV K D GK EALS +KQP N KYTWK NNFS 
Sbjct: 173 KLVSLETFNDSSNGFLVDDCCAFGVDIFVMKCD-GKGEALSLIKQPKNNKYTWKTNNFSQ 232

Query: 214 LPHNI 219
           L  N+
Sbjct: 233 LDENM 234

BLAST of Sed0018106 vs. NCBI nr
Match: XP_038875772.1 (uncharacterized protein LOC120068142 [Benincasa hispida])

HSP 1 Score: 253.1 bits (645), Expect = 2.5e-63
Identity = 130/215 (60.47%), Postives = 156/215 (72.56%), Query Frame = 0

Query: 16  STNFPILYGNPSSLIWLRVVRSSRYEKPVHYTLQIQSFSLLAASLAKPNNDRYESQCFNA 75
           +T  P  +G+ SS     VV S+R+EKPVHYTL+IQSFSLL   LA     R+ESQ FNA
Sbjct: 11  NTVSPNPHGDNSS----SVVMSTRHEKPVHYTLKIQSFSLLKNGLASSQRQRFESQKFNA 70

Query: 76  CGYKWKLALYPNGDVKRKGSDHISLYLVSAEDKVVSSNSEVNVVFTFLVYDNFKDKYLTI 135
             Y+WKLALYPNGD +R  S+HISLYLV   + ++S+ SEVNVVFTFLVYD  + KYLT+
Sbjct: 71  GCYEWKLALYPNGDERRNVSNHISLYLVIVGNNILSTTSEVNVVFTFLVYDTLRGKYLTV 130

Query: 136 QDGKIRRFHAMKREWGYEKLISLASFNDASNGFLVNDHCAFGVDIFVKKGDEGKREALSF 195
           QDGK+RRF AMK EWG EKL+ L +FNDASNGFLV+D C FGVDIFV   D G  E  S 
Sbjct: 131 QDGKMRRFSAMKTEWGIEKLLPLDTFNDASNGFLVDDCCVFGVDIFVMSCDGGMGEVFSL 190

Query: 196 VKQPTNGKYTWKINNFSLLPHNIYTLSDPFTVDCY 231
           +KQP N +YTWK+NNFS L   +   S+PFTV+ Y
Sbjct: 191 IKQPKNYEYTWKLNNFSQLGSTLKE-SNPFTVESY 220

BLAST of Sed0018106 vs. ExPASy Swiss-Prot
Match: Q9M2I9 (MATH domain and coiled-coil domain-containing protein At3g58270 OS=Arabidopsis thaliana OX=3702 GN=At3g58270 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.5e-07
Identity = 35/130 (26.92%), Postives = 59/130 (45.38%), Query Frame = 0

Query: 53  FSLLAASLAKPNNDRYESQCFNACGYKWKLALYPNGDVKRKGSDHISLYLVSAEDKVVSS 112
           F+ +  + +   + +  S  F   G KW+L  +P G+    G + +SLYL  A  + +  
Sbjct: 9   FTWVIKNFSSQQSRKNYSDEFFVDGCKWRLLAFPKGN----GVEKLSLYLAVAGSEFLPD 68

Query: 113 NSEVNVVFTFLVYDNFKDKYLTIQDGKIRRFHAMKREWGYEKLISLASFNDASNGFLVND 172
               +  F F V +   D+    ++ K   F A   +WG+  ++SL   +D   GFLVN 
Sbjct: 69  GWRRHAYFHFSVVNQLSDELSQARETK-NWFDASTSDWGFTSMLSLKKLHDKDGGFLVNG 128

Query: 173 HCAFGVDIFV 183
                VD+ V
Sbjct: 129 ELKIVVDVSV 133

BLAST of Sed0018106 vs. ExPASy Swiss-Prot
Match: Q9M2J1 (MATH domain and coiled-coil domain-containing protein At3g58250 OS=Arabidopsis thaliana OX=3702 GN=At3g58250 PE=4 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 3.9e-06
Identity = 34/132 (25.76%), Postives = 62/132 (46.97%), Query Frame = 0

Query: 51  QSFSLLAASLAKPNNDRYESQCFNACGYKWKLALYPNGDVKRKGSDHISLYLVSAEDKVV 110
           + FS +  + +   +++  S  F   G +W+L  +P G+  +  SDH+SLYL  AE + +
Sbjct: 9   KKFSWVIKNFSSLQSEKIYSDQFVIDGCRWRLLAFPKGNDTK--SDHLSLYLDVAESESL 68

Query: 111 SSNSEVNVVFTFLVYDNFKDKYLTIQDGKIRRFHAMKREWGYEKLISLASFNDASNGFLV 170
                 +  F+F + ++  +K  + +   I  F     +WG+  L+ L       +GFLV
Sbjct: 69  PCGWRRHAQFSFTIVNHIPEK-CSQRKETIHWFCEKVSDWGFTNLVPLIELKAEDSGFLV 128

Query: 171 NDHCAFGVDIFV 183
                  V+I V
Sbjct: 129 KGELKIVVEIEV 137

BLAST of Sed0018106 vs. ExPASy TrEMBL
Match: A0A6J1CZ69 (ubiquitin carboxyl-terminal hydrolase 13-like OS=Momordica charantia OX=3673 GN=LOC111015609 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.6e-71
Identity = 141/208 (67.79%), Postives = 162/208 (77.88%), Query Frame = 0

Query: 25  NPSSLIWLRVVRSSRYEKPVHYTLQIQSFSLLAASLAKPNNDRYESQCFNACGYKWKLAL 84
           +PSS     V+  +R EKP+HYTLQIQSFSLL  +LA  N DRYESQ FNA GYKWKLA+
Sbjct: 8   SPSSEAADSVLSFTRDEKPLHYTLQIQSFSLLKTALAASNCDRYESQIFNAGGYKWKLAV 67

Query: 85  YPNGDVKRKGSDHISLYLVSAEDKVVSSNSEVNVVFTFLVYDNFKDKYLTIQDGKIRRFH 144
           YPNGDVKR GSDHISLYLV AED +    SEVNVVFTFLVYDN  DKYL +QD K+RRFH
Sbjct: 68  YPNGDVKRNGSDHISLYLVKAEDGI--PTSEVNVVFTFLVYDNLNDKYLAVQDEKVRRFH 127

Query: 145 AMKREWGYEKLISLASFNDASNGFLVNDHCAFGVDIFVKKGDEGKREALSFVKQPTNGKY 204
           +++ EW +EKLISL +FND+SNGFLV D CAFGVDI VKK D GK E +SF+K+P N +Y
Sbjct: 128 SIQTEWEFEKLISLETFNDSSNGFLVGDCCAFGVDIVVKKCD-GKGEVVSFIKEPKNNEY 187

Query: 205 TWKINNFSLLPHNIYTLSDPFTVDCYNC 233
           TWK NNFS L  N+Y  SDPFTV+ Y C
Sbjct: 188 TWKTNNFSQLDKNMYE-SDPFTVEGYRC 211

BLAST of Sed0018106 vs. ExPASy TrEMBL
Match: A0A0A0KND8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G432550 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 5.0e-65
Identity = 135/228 (59.21%), Postives = 159/228 (69.74%), Query Frame = 0

Query: 19  FPILYGNPSSLIWLRVVRSSRYEKPVHYTLQIQSFSLLAASLAKPNNDRYESQCFNACGY 78
           FP  +G+  S     VV SSRYEKPVHY L+IQSFSLL   LA     R+ESQ FNA GY
Sbjct: 14  FPKSHGHDDSAS-ASVVTSSRYEKPVHYILKIQSFSLLKEGLACSPRQRFESQKFNAGGY 73

Query: 79  KWKLALYPNGDVKRKGSDHISLYLVSAEDKVVSSNSEVNVVFTFLVYDNFKDKYLTIQDG 138
           +WKLALYPNGD +R  SDHISLYLV   D ++S+ SEVN VFTFLVYD  + KYLT+QDG
Sbjct: 74  EWKLALYPNGDQRRDVSDHISLYLVMVGDNILSTTSEVNAVFTFLVYDTLRGKYLTVQDG 133

Query: 139 KIRRFHAMKREWGYEKLISLASFNDASNGFLVNDHCAFGVDIFVKKGDEGKREALSFVKQ 198
           K+RRF A K EWG EKL+ L +F DASNGFLV+D C FGVDIFV   D GK E  S ++Q
Sbjct: 134 KMRRFSATKTEWGIEKLLPLNTFKDASNGFLVDDCCVFGVDIFVMNSDVGKGEVFSLIEQ 193

Query: 199 PTNGKYTWKINNFSLLPHNIYTLSDPFTVDCYNCMFNILFLVKLHLFP 247
           P N KYTWK+NNFS L  ++    +PFTV+  NC +      K+ LFP
Sbjct: 194 PNNYKYTWKLNNFSKLDSSLRE-CNPFTVE--NCCW------KIRLFP 231

BLAST of Sed0018106 vs. ExPASy TrEMBL
Match: A0A6J1CZF7 (uncharacterized protein LOC111015610 OS=Momordica charantia OX=3673 GN=LOC111015610 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 2.5e-64
Identity = 123/185 (66.49%), Postives = 147/185 (79.46%), Query Frame = 0

Query: 34  VVRSSRYEKPVHYTLQIQSFSLLAASLAKPNNDRYESQCFNACGYKWKLALYPNGDVKRK 93
           V+RS R EKP+HYTLQIQ FSLL  +LA  + DRYES  F+  G+KWKLA+YP+GDVKR 
Sbjct: 53  VLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRN 112

Query: 94  GSDHISLYLVSAEDKVVSSNSEVNVVFTFLVYDNFKDKYLTIQDGKIRRFHAMKREWGYE 153
           GS+HISLYLV+AED +     ++ VVFT LVYDN +D YL + DGK+RRFHAMK+EWG+E
Sbjct: 113 GSNHISLYLVTAEDDI--PTLDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFE 172

Query: 154 KLISLASFNDASNGFLVNDHCAFGVDIFVKKGDEGKREALSFVKQPTNGKYTWKINNFSL 213
           KL+SL +FND+SNGFLV+D CAFGVDIFV K D GK EALS +KQP N KYTWK NNFS 
Sbjct: 173 KLVSLETFNDSSNGFLVDDCCAFGVDIFVMKCD-GKGEALSLIKQPKNNKYTWKTNNFSQ 232

Query: 214 LPHNI 219
           L  N+
Sbjct: 233 LDENM 234

BLAST of Sed0018106 vs. ExPASy TrEMBL
Match: A0A6J1CYF6 (uncharacterized protein LOC111015611 OS=Momordica charantia OX=3673 GN=LOC111015611 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 1.1e-61
Identity = 123/199 (61.81%), Postives = 151/199 (75.88%), Query Frame = 0

Query: 34  VVRSSRYEKPVHYTLQIQSFSLLAASLAKPNNDRYESQCFNACGYKWKLALYPNGDVKRK 93
           V+RS R EKP+HYTL+I+SFSLL  +LA    DR+ SQ F+A GYKWKLALYPNGD  R 
Sbjct: 33  VLRSIRDEKPLHYTLKIKSFSLLKKALASSKRDRFVSQIFHASGYKWKLALYPNGDKNRN 92

Query: 94  GSDHISLYLVSAEDKVVSSNSEVNVVFTFLVYDNFKDKYLTIQDGKIRRFHAMKREWGYE 153
           GS +ISLYLV+AED++VS+ SEVNVV TFLVYD+ +DKYL IQDGK++RFH MK EWG+E
Sbjct: 93  GSGYISLYLVTAEDEIVSATSEVNVVLTFLVYDSLRDKYLAIQDGKVKRFHRMKTEWGFE 152

Query: 154 KLISLASFNDASNGFLVNDHCAFGVDIFVKKGDE-GKREALSFVKQPTNGKYTWKINNFS 213
           KLIS   FN+ SNGFLV  + AFGVDIFV K D+ GK E LS +  P + K+TWKIN+FS
Sbjct: 153 KLISFDIFNNPSNGFLVGGYAAFGVDIFVIKSDDGGKGEILSLINPPEHYKFTWKINHFS 212

Query: 214 LLPHNIYTLSDPFTVDCYN 232
                +   SD F+V+ Y+
Sbjct: 213 TQSKTL--SSDVFSVEGYH 229

BLAST of Sed0018106 vs. ExPASy TrEMBL
Match: A0A5D3BGH9 (MATH domain and coiled-coil domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00850 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.7e-60
Identity = 123/200 (61.50%), Postives = 152/200 (76.00%), Query Frame = 0

Query: 32  LRVVRSSRYEKPVHYTLQIQSFSLLAASLAKPNNDRYESQCFNACGYKWKLALYPNGDVK 91
           L ++RSSR  +P+HYTLQIQSFSLL A+LA  N DRYESQ FN   Y WKLA+YPNGD +
Sbjct: 52  LGILRSSRVGRPLHYTLQIQSFSLLKAALAASNCDRYESQIFNVGCYSWKLAVYPNGDEE 111

Query: 92  RKGSDHISLYLVSAEDKVVSSNSEVNVVFTFLVYDNFKDKYLTIQDGKIRRFHAMKREWG 151
           R GS+HISLYLV AED+  ++ SEVNV FTFLVYD  KD+Y+T QDGK+RRFHAMK+EWG
Sbjct: 112 RNGSNHISLYLVKAEDE-NATTSEVNVWFTFLVYDTLKDRYMTFQDGKVRRFHAMKKEWG 171

Query: 152 YEKLISLASFNDASNGFLVNDHCAFGVDIFVKKGDEGKREALSFVKQPTN-GKYTWKINN 211
           +EKL+SL +FND SNG LV+D CAFGVDI V K  +GK E LSF++QP N  +Y++    
Sbjct: 172 FEKLVSLDTFNDTSNGLLVDDCCAFGVDIIVMKFYDGKGEVLSFIQQPKNCTQYSYIFIK 231

Query: 212 FSLLPHNIYTLSDPFTVDCY 231
            S    ++ T SDPF ++ Y
Sbjct: 232 LS----SVQTESDPFNMENY 246

BLAST of Sed0018106 vs. TAIR 10
Match: AT3G17380.1 (TRAF-like family protein )

HSP 1 Score: 173.3 bits (438), Expect = 2.4e-43
Identity = 88/196 (44.90%), Postives = 120/196 (61.22%), Query Frame = 0

Query: 34  VVRSSRYEKPVHYTLQIQSFSLLAASLAKPNNDRYESQCFNACGYKWKLALYPNGDVKRK 93
           +++S     P HY ++I+SFSL    L K   +RYE++ F A GYKWKL LYPNG+  + 
Sbjct: 10  IIKSISDAPPTHYMVKIESFSL----LTKHAIERYETESFEAGGYKWKLVLYPNGNKSKN 69

Query: 94  GSDHISLYLVSAEDKVVSSNSEVNVVFTFLVYDNFKDKYLTIQDGKIRRFHAMKREWGYE 153
             DH+S+YL  A+   +S   EV  VF   + D  KD YL +Q G  RRFH++KREWG++
Sbjct: 70  TKDHVSVYLSLADSSSLSPGWEVYAVFRLYLLDQNKDNYLILQ-GNERRFHSVKREWGFD 129

Query: 154 KLISLASFNDASNGFLVNDHCAFGVDIFV-KKGDEGKREALSFVKQPTNGKYTWKINNFS 213
           K I   +F+DASNG+L+ D C FG D+FV K+   G+ E LS +K  T+ K+ WKI NFS
Sbjct: 130 KFIPTGTFSDASNGYLMEDTCMFGADVFVSKERRSGRGECLSMIKDATSSKHVWKIENFS 189

Query: 214 LLPHNIYTLSDPFTVD 229
            L    Y  +  F  D
Sbjct: 190 KLDKESYDSNAFFAGD 200

BLAST of Sed0018106 vs. TAIR 10
Match: AT5G26280.1 (TRAF-like family protein )

HSP 1 Score: 142.1 bits (357), Expect = 5.9e-34
Identity = 83/229 (36.24%), Postives = 124/229 (54.15%), Query Frame = 0

Query: 1   MFGKKETQGFFMASISTNFPILYGNPSSLIW-LRVVRSSRYEKPVHYTLQIQSFSLLAAS 60
           +F    +  F +  ++    I Y +  SL   L V R  R E+P    + I SFS++   
Sbjct: 16  LFITSSSAEFIIQQVTKGRGIEYNSSYSLEENLGVTRELREERPSSKIVTITSFSVI--- 75

Query: 61  LAKPNNDRYESQCFNACGYKWKLALYPNGDVKRKGSDHISLYLVSAEDKVVSSNSEVNVV 120
             K   + YES  F A GYKW+L LY NG+    G+DHISLY    E   +    EVNV 
Sbjct: 76  --KGRGEPYESSVFEAAGYKWRLVLYVNGNKNDGGNDHISLYARIEETNSLPLGWEVNVD 135

Query: 121 FTFLVYDNFKDKYLTIQDGKIRRFHAMKREWGYEKLISLASFNDASNGFLVNDHCAFGVD 180
               V++    KYLT+ DG ++R++  K+EWG+ +LI  ++F +A+ G+L  D  +FG +
Sbjct: 136 LKLFVHNGKLHKYLTVTDGLVKRYNNAKKEWGFGQLIPRSTFYNANEGYLDQDTGSFGAE 195

Query: 181 IFVKKGDEGKREALSFVKQPTNGKYTWKINNFSLLPHNIYTLSDPFTVD 229
           IF+ K  + ++E ++F+  P N  +TWKI  FS L    Y  SD F V+
Sbjct: 196 IFIVKPAQ-QQEKVTFISNPPNNVFTWKILRFSTLEDKFY-YSDDFLVE 237

BLAST of Sed0018106 vs. TAIR 10
Match: AT2G04170.1 (TRAF-like family protein )

HSP 1 Score: 139.8 bits (351), Expect = 2.9e-33
Identity = 76/190 (40.00%), Postives = 110/190 (57.89%), Query Frame = 0

Query: 39  RYEKPVHYTLQIQSFSLLAASLAKPNNDRYESQCFNACGYKWKLALYPNGDVKRKGSDHI 98
           R E+P +  L I SFS++     K   + YES  F A GYKW+L LY NG+    G++HI
Sbjct: 125 RDERPSNKILTITSFSVI-----KGRGEPYESSVFEAGGYKWRLVLYVNGNQNDGGNNHI 184

Query: 99  SLYLVSAEDKVVSSNSEVNVVFTFLVYDNFKDKYLTIQDGKIRRFHAMKREWGYEKLISL 158
           SLY+   E + +    EVNV     VY+  + KYL ++DG ++R++  K+EWGY KLI L
Sbjct: 185 SLYVRIEETESLPKGWEVNVELKLFVYNGKQRKYLIVKDGIVKRYNDAKKEWGYGKLIPL 244

Query: 159 ASFNDASNGFLVNDHCAFGVDIFVKKGDEGKREALSFVKQPTNGKYTWKINNFSLLPHNI 218
            +F D + G+L  D  +FG +IF     +  +E ++F+  P N  +TWKI +FS L    
Sbjct: 245 TTFLDTNEGYLEQDIASFGAEIFSGTAVQ-VQEKVTFISNPPNNVFTWKILHFSNLEDKF 304

Query: 219 YTLSDPFTVD 229
           Y  SD F V+
Sbjct: 305 Y-YSDDFLVE 307

BLAST of Sed0018106 vs. TAIR 10
Match: AT2G04170.2 (TRAF-like family protein )

HSP 1 Score: 139.8 bits (351), Expect = 2.9e-33
Identity = 76/190 (40.00%), Postives = 110/190 (57.89%), Query Frame = 0

Query: 39  RYEKPVHYTLQIQSFSLLAASLAKPNNDRYESQCFNACGYKWKLALYPNGDVKRKGSDHI 98
           R E+P +  L I SFS++     K   + YES  F A GYKW+L LY NG+    G++HI
Sbjct: 125 RDERPSNKILTITSFSVI-----KGRGEPYESSVFEAGGYKWRLVLYVNGNQNDGGNNHI 184

Query: 99  SLYLVSAEDKVVSSNSEVNVVFTFLVYDNFKDKYLTIQDGKIRRFHAMKREWGYEKLISL 158
           SLY+   E + +    EVNV     VY+  + KYL ++DG ++R++  K+EWGY KLI L
Sbjct: 185 SLYVRIEETESLPKGWEVNVELKLFVYNGKQRKYLIVKDGIVKRYNDAKKEWGYGKLIPL 244

Query: 159 ASFNDASNGFLVNDHCAFGVDIFVKKGDEGKREALSFVKQPTNGKYTWKINNFSLLPHNI 218
            +F D + G+L  D  +FG +IF     +  +E ++F+  P N  +TWKI +FS L    
Sbjct: 245 TTFLDTNEGYLEQDIASFGAEIFSGTAVQ-VQEKVTFISNPPNNVFTWKILHFSNLEDKF 304

Query: 219 YTLSDPFTVD 229
           Y  SD F V+
Sbjct: 305 Y-YSDDFLVE 307

BLAST of Sed0018106 vs. TAIR 10
Match: AT2G04170.3 (TRAF-like family protein )

HSP 1 Score: 139.8 bits (351), Expect = 2.9e-33
Identity = 76/190 (40.00%), Postives = 110/190 (57.89%), Query Frame = 0

Query: 39  RYEKPVHYTLQIQSFSLLAASLAKPNNDRYESQCFNACGYKWKLALYPNGDVKRKGSDHI 98
           R E+P +  L I SFS++     K   + YES  F A GYKW+L LY NG+    G++HI
Sbjct: 3   RDERPSNKILTITSFSVI-----KGRGEPYESSVFEAGGYKWRLVLYVNGNQNDGGNNHI 62

Query: 99  SLYLVSAEDKVVSSNSEVNVVFTFLVYDNFKDKYLTIQDGKIRRFHAMKREWGYEKLISL 158
           SLY+   E + +    EVNV     VY+  + KYL ++DG ++R++  K+EWGY KLI L
Sbjct: 63  SLYVRIEETESLPKGWEVNVELKLFVYNGKQRKYLIVKDGIVKRYNDAKKEWGYGKLIPL 122

Query: 159 ASFNDASNGFLVNDHCAFGVDIFVKKGDEGKREALSFVKQPTNGKYTWKINNFSLLPHNI 218
            +F D + G+L  D  +FG +IF     +  +E ++F+  P N  +TWKI +FS L    
Sbjct: 123 TTFLDTNEGYLEQDIASFGAEIFSGTAVQ-VQEKVTFISNPPNNVFTWKILHFSNLEDKF 182

Query: 219 YTLSDPFTVD 229
           Y  SD F V+
Sbjct: 183 Y-YSDDFLVE 185

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022146381.13.3e-7167.79ubiquitin carboxyl-terminal hydrolase 13-like [Momordica charantia][more]
XP_038874970.12.9e-6762.86uncharacterized protein LOC120067490 [Benincasa hispida][more]
KAE8648447.11.0e-6459.21hypothetical protein Csa_008888 [Cucumis sativus][more]
XP_022146382.15.1e-6466.49uncharacterized protein LOC111015610 [Momordica charantia][more]
XP_038875772.12.5e-6360.47uncharacterized protein LOC120068142 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Q9M2I93.5e-0726.92MATH domain and coiled-coil domain-containing protein At3g58270 OS=Arabidopsis t... [more]
Q9M2J13.9e-0625.76MATH domain and coiled-coil domain-containing protein At3g58250 OS=Arabidopsis t... [more]
Match NameE-valueIdentityDescription
A0A6J1CZ691.6e-7167.79ubiquitin carboxyl-terminal hydrolase 13-like OS=Momordica charantia OX=3673 GN=... [more]
A0A0A0KND85.0e-6559.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G432550 PE=4 SV=1[more]
A0A6J1CZF72.5e-6466.49uncharacterized protein LOC111015610 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A6J1CYF61.1e-6161.81uncharacterized protein LOC111015611 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A5D3BGH91.7e-6061.50MATH domain and coiled-coil domain-containing protein OS=Cucumis melo var. makuw... [more]
Match NameE-valueIdentityDescription
AT3G17380.12.4e-4344.90TRAF-like family protein [more]
AT5G26280.15.9e-3436.24TRAF-like family protein [more]
AT2G04170.12.9e-3340.00TRAF-like family protein [more]
AT2G04170.22.9e-3340.00TRAF-like family protein [more]
AT2G04170.32.9e-3340.00TRAF-like family protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002083MATH/TRAF domainPFAMPF00917MATHcoord: 64..181
e-value: 4.0E-10
score: 39.8
IPR002083MATH/TRAF domainPROSITEPS50144MATHcoord: 201..246
score: 10.572254
IPR002083MATH/TRAF domainPROSITEPS50144MATHcoord: 43..180
score: 24.405354
IPR002083MATH/TRAF domainCDDcd00121MATHcoord: 45..180
e-value: 3.93429E-19
score: 78.575
IPR008974TRAF-likeGENE3D2.60.210.10Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain Acoord: 33..188
e-value: 1.7E-35
score: 124.1
NoneNo IPR availablePANTHERPTHR46162TRAF-LIKE FAMILY PROTEINcoord: 37..229
NoneNo IPR availablePANTHERPTHR46162:SF40UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 12-LIKEcoord: 37..229
NoneNo IPR availableSUPERFAMILY49599TRAF domain-likecoord: 201..238
NoneNo IPR availableSUPERFAMILY49599TRAF domain-likecoord: 44..184

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0018106.1Sed0018106.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0005515 protein binding