Sed0018086 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAAATGTTGCTGTTGCAGTGATAAAACAAAAGTGAAGAAAGGAATTTGGACAGTGGAAGAAGACCAAAAGCTTATTGCCTATGTTAAAAGATATGGCCACTGGAATTGAAGGAAACTTCCAAAATATGCTGGTGACATTTTATTTTATTTCATAATCTTTATGCAAAGTTATCTATATATTAATTAGTGAGTTTTTTTTATAATTATATTATGGTGAGCTAATTTCACAAGAGATTTGAAAATGTTAGGGCTTTTGAGATGTGGGAAGAGTTGTAGGATGCGATGGAAGAATTATTTAAACCCTAATATTAGGAGAGGGGGGTTTTCGCCAAAAGAAGAAGAAATCATCATCGAAATGTATGCCAAGATGGGTAGCAGGTACTTCAAGTTTCGTAGGAGTAAATTTTTTTTTTCTTTTGAGATTGCAACAATTGGAAGTGGGGGGATTCATACCCATGACCTCTAGTCATTGGGCATACACTAGTGCCGCTGCTCAGCTCATGTTGGCAATAGATATTTTTAGTATAATATGAATGTAGTGTAAGTTATAGGTATACATTAAAAAATACTTATTAACATACTATAAAAGATATTTTTTATTAATTTTTTTTTTATTGAATGGGTCAATGACGTGATTGGTTATTTGGTTTGATGTTAATCCATTATCTCTTCACGGTCATGAGTTTGATCCCTTAAATTGTTATTTGTAATCACCTTCCCTCAACTTGTACACAAAAAAAAGGTAGGTTATTATGGAAAGTTTTTTTTTTTTTTTGAGACAAGGTTACTATGGAAAGTTGTATTAGAGCTTCTGTCCAGGAAATTCGTAATAAATTAATTTCTAAGTAAATGATAACATGAATTGAACTCATCATCTTAAGTATTTCAATACCCTTTTATTAAGGGGCTTTTGCATGTATATTACAAAATAGATAAAATATTACATGAATAGAACAATAATGAAAATATTTGCACATATAGCAAAAATTGTAAATTGATAGACTTCATATTGATAGATTCTATCGATAAAGGGTGATATAATCAATTACTAATAAATAAAGTAAATTGATAGACTTCCATAAGATTCTATCAAGAGTCTATCAATAAGAGTCGATAGAATCAATCACCGATAAAATTGATAGACTTCCATCACTAGAGAATGATATATTCTATCAAAGTCTTCTATAAAAAAAGTAAATTTTTTTTTTTAAATGGCAGAATTTGCTATAAAAGAATTATTTTAAAAAATGTGTTATAATTGTAAACTGTAGTAAAAAAAATTGCTATACAGCGTAAATTCCCTTTTATTAACTACTTGAGTCATTCCATGATCATTATACAATAATTTGAGTTGTAAATTTGTTCAACTCAAATAATACTTGTGAAACAATTTATCTAACCCAACCCAATCACGAAATATTTAGGATGAGTTATTTGATTTGAGTCATATAGTTAATAAAATATTCAATGGTATAAGTTCTATTTCAATATTTTTCAAAAATTTAGTTGCTTCATATGTTTTTTTTTTCTTTTTTGAAAAACTGCCTCATATATTGTTAAACCATAAAATAAAATAAGATTAACTGTTCCATATTTTTATAATCAGATTAACTATTCCATTTTAATTTCTATAGTGAAATGTACATTTAAAGACTTAAAAATAATATTTTGTAAAATAAAAGTCCAAAAACAATAATAAAATTAAAATTAATATATGCAAATTAATAATAAAGTTAGATTAGTTCACGCCAATCCAAACTAATTTTAAGTTACCTCATAAAATAAATCCTAAAAAATTTATTTATTTGAATTTAATTAAAAAACAAATTCAATTAATCGGAATATTGAAGTTATTAGTTTTTTAACACCCCTAATTTTGGTGGGTCCATTGTGTTGTGTTCGAGCCATTAAAAATGCAATCTTTGATCATAAATTCGTTCTAATTGTATTATTTCACGTGACAGGTCTTGTTATGACTTTTTATCGGTTTAAATTTTTTTAATAGAGTAGTGAGTTTATAAGATATTAGAATTATCTTTGATTTGAAATGTTGAACATATTTGTGAGTTCATGAATTTATATGTTGATGCTTTTTTTATTCATGTAGATGGTCTACCATGGCTTCTCTAATGCCAGGAAGAACAGACAATGATATAAAAAATCATTGGATTACTGTTCTAAAGAGACGAATAATGAAGCAAAAAATTGAGAAGAACAATATATCAACAGCAATGGCTAACCAACTACCACCGTCGCCGGAAAAAATTAGTCCAATTCATGAGGATTTTTCCGGCGAGATTTTGAGCTCAAACAGCCATTTCTCCAATAGTTCTTCTCTCATTGTTGATCCAACCGCTCTAGAAAGTGCTCTAATTGAGACAGTTGAAACTCCGACGGCCGGAATTATTAAAATGCTGCCGGTGGATGATCAGCTTCCGGCGAGTTTCGCCGGAGATTTTTGGACTGACCCTTTATGGATGGACTCTAATTTCGACTTGCCGTTTGATTATCAATATCAAGTCTTTGGAGAATATCTTTTGCAAGAAGGCTTTGATTCTGGGTTTGGAGATCTATTCTAA ATGGCGAAATGTTGCTGTTGCAGTGATAAAACAAAAGTGAAGAAAGGAATTTGGACAGTGGAAGAAGACCAAAAGCTTATTGCCTATAGTTGTAGGATGCGATGGAAGAATTATTTAAACCCTAATATTAGGAGAGGGGGGTTTTCGCCAAAAGAAGAAGAAATCATCATCGAAATGTATGCCAAGATGGGTAGCAGATGGTCTACCATGGCTTCTCTAATGCCAGGAAGAACAGACAATGATATAAAAAATCATTGGATTACTGTTCTAAAGAGACGAATAATGAAGCAAAAAATTGAGAAGAACAATATATCAACAGCAATGGCTAACCAACTACCACCGTCGCCGGAAAAAATTAGTCCAATTCATGAGGATTTTTCCGGCGAGATTTTGAGCTCAAACAGCCATTTCTCCAATAGTTCTTCTCTCATTGTTGATCCAACCGCTCTAGAAAGTGCTCTAATTGAGACAGTTGAAACTCCGACGGCCGGAATTATTAAAATGCTGCCGGTGGATGATCAGCTTCCGGCGAGTTTCGCCGGAGATTTTTGGACTGACCCTTTATGGATGGACTCTAATTTCGACTTGCCGTTTGATTATCAATATCAAGTCTTTGGAGAATATCTTTTGCAAGAAGGCTTTGATTCTGGGTTTGGAGATCTATTCTAA ATGGCGAAATGTTGCTGTTGCAGTGATAAAACAAAAGTGAAGAAAGGAATTTGGACAGTGGAAGAAGACCAAAAGCTTATTGCCTATAGTTGTAGGATGCGATGGAAGAATTATTTAAACCCTAATATTAGGAGAGGGGGGTTTTCGCCAAAAGAAGAAGAAATCATCATCGAAATGTATGCCAAGATGGGTAGCAGATGGTCTACCATGGCTTCTCTAATGCCAGGAAGAACAGACAATGATATAAAAAATCATTGGATTACTGTTCTAAAGAGACGAATAATGAAGCAAAAAATTGAGAAGAACAATATATCAACAGCAATGGCTAACCAACTACCACCGTCGCCGGAAAAAATTAGTCCAATTCATGAGGATTTTTCCGGCGAGATTTTGAGCTCAAACAGCCATTTCTCCAATAGTTCTTCTCTCATTGTTGATCCAACCGCTCTAGAAAGTGCTCTAATTGAGACAGTTGAAACTCCGACGGCCGGAATTATTAAAATGCTGCCGGTGGATGATCAGCTTCCGGCGAGTTTCGCCGGAGATTTTTGGACTGACCCTTTATGGATGGACTCTAATTTCGACTTGCCGTTTGATTATCAATATCAAGTCTTTGGAGAATATCTTTTGCAAGAAGGCTTTGATTCTGGGTTTGGAGATCTATTCTAA MAKCCCCSDKTKVKKGIWTVEEDQKLIAYSCRMRWKNYLNPNIRRGGFSPKEEEIIIEMYAKMGSRWSTMASLMPGRTDNDIKNHWITVLKRRIMKQKIEKNNISTAMANQLPPSPEKISPIHEDFSGEILSSNSHFSNSSSLIVDPTALESALIETVETPTAGIIKMLPVDDQLPASFAGDFWTDPLWMDSNFDLPFDYQYQVFGEYLLQEGFDSGFGDLF Homology
BLAST of Sed0018086 vs. NCBI nr
Match: XP_038888759.1 (transcription factor MYB14-like [Benincasa hispida]) HSP 1 Score: 288.1 bits (736), Expect = 6.4e-74 Identity = 152/252 (60.32%), Postives = 180/252 (71.43%), Query Frame = 0
BLAST of Sed0018086 vs. NCBI nr
Match: XP_022988914.1 (transcription factor MYB4-like [Cucurbita maxima]) HSP 1 Score: 282.7 bits (722), Expect = 2.7e-72 Identity = 143/245 (58.37%), Postives = 174/245 (71.02%), Query Frame = 0
BLAST of Sed0018086 vs. NCBI nr
Match: XP_022930883.1 (transcription factor MYB8-like [Cucurbita moschata]) HSP 1 Score: 277.7 bits (709), Expect = 8.7e-71 Identity = 145/250 (58.00%), Postives = 175/250 (70.00%), Query Frame = 0
BLAST of Sed0018086 vs. NCBI nr
Match: KAG6589190.1 (Transcription factor MYB41, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 270.0 bits (689), Expect = 1.8e-68 Identity = 140/237 (59.07%), Postives = 169/237 (71.31%), Query Frame = 0
BLAST of Sed0018086 vs. NCBI nr
Match: KAG7022891.1 (Transcription factor MYB41, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 267.7 bits (683), Expect = 9.0e-68 Identity = 144/276 (52.17%), Postives = 175/276 (63.41%), Query Frame = 0
BLAST of Sed0018086 vs. ExPASy Swiss-Prot
Match: Q9LSI7 (Transcription factor MYB35 OS=Arabidopsis thaliana OX=3702 GN=MYB35 PE=1 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.8e-26 Identity = 55/117 (47.01%), Postives = 75/117 (64.10%), Query Frame = 0
BLAST of Sed0018086 vs. ExPASy Swiss-Prot
Match: Q9M0J5 (Transcription factor MYB41 OS=Arabidopsis thaliana OX=3702 GN=MYB41 PE=1 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 3.4e-25 Identity = 57/123 (46.34%), Postives = 79/123 (64.23%), Query Frame = 0
BLAST of Sed0018086 vs. ExPASy Swiss-Prot
Match: Q9FKL2 (Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 7.5e-25 Identity = 62/148 (41.89%), Postives = 85/148 (57.43%), Query Frame = 0
BLAST of Sed0018086 vs. ExPASy Swiss-Prot
Match: Q9S9K9 (Transcription factor MYB3 OS=Arabidopsis thaliana OX=3702 GN=MYB3 PE=1 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 7.5e-25 Identity = 57/156 (36.54%), Postives = 92/156 (58.97%), Query Frame = 0
BLAST of Sed0018086 vs. ExPASy Swiss-Prot
Match: Q9M0Y5 (Transcription factor MYB74 OS=Arabidopsis thaliana OX=3702 GN=MYB74 PE=2 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 7.5e-25 Identity = 55/123 (44.72%), Postives = 78/123 (63.41%), Query Frame = 0
BLAST of Sed0018086 vs. ExPASy TrEMBL
Match: A0A6J1JMX3 (transcription factor MYB4-like OS=Cucurbita maxima OX=3661 GN=LOC111486126 PE=4 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 1.3e-72 Identity = 143/245 (58.37%), Postives = 174/245 (71.02%), Query Frame = 0
BLAST of Sed0018086 vs. ExPASy TrEMBL
Match: A0A6J1EWR9 (transcription factor MYB8-like OS=Cucurbita moschata OX=3662 GN=LOC111437234 PE=4 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 4.2e-71 Identity = 145/250 (58.00%), Postives = 175/250 (70.00%), Query Frame = 0
BLAST of Sed0018086 vs. ExPASy TrEMBL
Match: A0A5A7SLJ9 (Transcription factor WER-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003800 PE=4 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 4.1e-66 Identity = 144/254 (56.69%), Postives = 173/254 (68.11%), Query Frame = 0
BLAST of Sed0018086 vs. ExPASy TrEMBL
Match: A0A1S3C0W1 (transcription factor WER-like OS=Cucumis melo OX=3656 GN=LOC103495552 PE=4 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 1.2e-65 Identity = 143/254 (56.30%), Postives = 173/254 (68.11%), Query Frame = 0
BLAST of Sed0018086 vs. ExPASy TrEMBL
Match: A0A0A0K1Q0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G045590 PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 1.0e-61 Identity = 141/255 (55.29%), Postives = 171/255 (67.06%), Query Frame = 0
BLAST of Sed0018086 vs. TAIR 10
Match: AT3G28470.1 (Duplicated homeodomain-like superfamily protein ) HSP 1 Score: 120.9 bits (302), Expect = 1.3e-27 Identity = 55/117 (47.01%), Postives = 75/117 (64.10%), Query Frame = 0
BLAST of Sed0018086 vs. TAIR 10
Match: AT4G22680.1 (myb domain protein 85 ) HSP 1 Score: 117.1 bits (292), Expect = 1.8e-26 Identity = 77/220 (35.00%), Postives = 118/220 (53.64%), Query Frame = 0
BLAST of Sed0018086 vs. TAIR 10
Match: AT4G28110.1 (myb domain protein 41 ) HSP 1 Score: 116.7 bits (291), Expect = 2.4e-26 Identity = 57/123 (46.34%), Postives = 79/123 (64.23%), Query Frame = 0
BLAST of Sed0018086 vs. TAIR 10
Match: AT1G22640.1 (myb domain protein 3 ) HSP 1 Score: 115.5 bits (288), Expect = 5.3e-26 Identity = 57/156 (36.54%), Postives = 92/156 (58.97%), Query Frame = 0
BLAST of Sed0018086 vs. TAIR 10
Match: AT4G05100.1 (myb domain protein 74 ) HSP 1 Score: 115.5 bits (288), Expect = 5.3e-26 Identity = 55/123 (44.72%), Postives = 78/123 (63.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|