Sed0018072 (gene) Chayote v1

Overview


Name	Sed0018072
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Pyrroline-5-carboxylate reductase
Location	LG05: 32924653 .. 32925806 (-)
RNA-Seq Expression	Sed0018072
Synteny	Sed0018072

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGAGCGTGGTGAAGATTTTAAGCTTTTTTTTTTCCTTAAAACCCTCACCATTTCTCCCCAAAATATACCCATTTGCTTTTTCATCTTCCAACACCGAAAGAGAAACAAAAAAAGGAAACCCTTAAAAAACCCAGAAACCCCATCAAAGAAGAAACCCCTGAAAAAATTTACAGATTTGTGAATCGAGGGTTGTTGTTTGTTTTTGGGAATGGCAGATAATAAGGAAGAAGACCCAGAAACGATTCCTCCTCAATCGTACGCTTTGATTATGAAATTGATGAGCAAAAGAAGAACATGGGTATGTCTGTTTGTTCTTGTTTATGCCCTAATTCTGTCATCTTCTTGGAATTTTCTTGCTTCTATTCTGTCTTGGTACCAATCCCAAGTGGGAGATTCATCATCATCATCATCTTCTTCTTCTTCTTCATTTGGTTGGCCTGCTATTTATGCTTCTTTGCTGCTTGGGGCTGTTTTTGGGGTTCTTTCCATGGTGGCTGCACTGGCTGTGATGGTTCCAGCCACTCTTGTCACTTGGATCACCATTGTTGTGCTGCTTTACTTCTTTGGGAAGCCTAGGAGGGCTCTTGTGGTGGAGGGGAGGAAGATTACTAGGGAGATTTTTGGAGTTGTGGTTAGGATTTTGTTGAAGGAAGGGAATTTGGTGGCTGCTGTTTGTGCTGTTTTGGGATATTTTGCCCTGTTTAGGAAGACTAATGAGAGCTAATGGTTGCTGGGTTTTGGAGTTTATGGCTGGTTTTGGTGGATTTGGAGGTTTGGATCAAATTGGTGTATCTGAAATTTGGTAAAGTTCTTTGTTTGGTTGCTTATACTTTTAGGTTTTCTGACATTATGTGATGGGGGGTTTTAATGGTTTAGATCTTTCTTGTAACTGTTAGGTTGATGGGTTTACTTGGATTATTACTCTTTCTTCTGTTCTTTTTGTAATGGAGTTTATCTCTTCAGAAATGCTTCATAACTTGGGATTACAGTATGTAATAGAAGGAGTTTGTAACTCATTCATGTAATGAAATGGGTAGTTTTAGAACAAGGGTGGTCTGGAATTGTTCTGATGGTTGTGATTTAACTGTTAGATTCAAAGATACGGTGAACATGAATGAACTTTGAAACAATATTGCATTGTTGTCCCAAAGGG

mRNA sequence

CAGAGCGTGGTGAAGATTTTAAGCTTTTTTTTTTCCTTAAAACCCTCACCATTTCTCCCCAAAATATACCCATTTGCTTTTTCATCTTCCAACACCGAAAGAGAAACAAAAAAAGGAAACCCTTAAAAAACCCAGAAACCCCATCAAAGAAGAAACCCCTGAAAAAATTTACAGATTTGTGAATCGAGGGTTGTTGTTTGTTTTTGGGAATGGCAGATAATAAGGAAGAAGACCCAGAAACGATTCCTCCTCAATCGTACGCTTTGATTATGAAATTGATGAGCAAAAGAAGAACATGGGTATGTCTGTTTGTTCTTGTTTATGCCCTAATTCTGTCATCTTCTTGGAATTTTCTTGCTTCTATTCTGTCTTGGTACCAATCCCAAGTGGGAGATTCATCATCATCATCATCTTCTTCTTCTTCTTCATTTGGTTGGCCTGCTATTTATGCTTCTTTGCTGCTTGGGGCTGTTTTTGGGGTTCTTTCCATGGTGGCTGCACTGGCTGTGATGGTTCCAGCCACTCTTGTCACTTGGATCACCATTGTTGTGCTGCTTTACTTCTTTGGGAAGCCTAGGAGGGCTCTTGTGGTGGAGGGGAGGAAGATTACTAGGGAGATTTTTGGAGTTGTGGTTAGGATTTTGTTGAAGGAAGGGAATTTGGTGGCTGCTGTTTGTGCTGTTTTGGGATATTTTGCCCTGTTTAGGAAGACTAATGAGAGCTAATGGTTGCTGGGTTTTGGAGTTTATGGCTGGTTTTGGTGGATTTGGAGGTTTGGATCAAATTGGTGTATCTGAAATTTGGTAAAGTTCTTTGTTTGGTTGCTTATACTTTTAGGTTTTCTGACATTATGTGATGGGGGGTTTTAATGGTTTAGATCTTTCTTGTAACTGTTAGGTTGATGGGTTTACTTGGATTATTACTCTTTCTTCTGTTCTTTTTGTAATGGAGTTTATCTCTTCAGAAATGCTTCATAACTTGGGATTACAGTATGTAATAGAAGGAGTTTGTAACTCATTCATGTAATGAAATGGGTAGTTTTAGAACAAGGGTGGTCTGGAATTGTTCTGATGGTTGTGATTTAACTGTTAGATTCAAAGATACGGTGAACATGAATGAACTTTGAAACAATATTGCATTGTTGTCCCAAAGGG

Coding sequence (CDS)

ATGGCAGATAATAAGGAAGAAGACCCAGAAACGATTCCTCCTCAATCGTACGCTTTGATTATGAAATTGATGAGCAAAAGAAGAACATGGGTATGTCTGTTTGTTCTTGTTTATGCCCTAATTCTGTCATCTTCTTGGAATTTTCTTGCTTCTATTCTGTCTTGGTACCAATCCCAAGTGGGAGATTCATCATCATCATCATCTTCTTCTTCTTCTTCATTTGGTTGGCCTGCTATTTATGCTTCTTTGCTGCTTGGGGCTGTTTTTGGGGTTCTTTCCATGGTGGCTGCACTGGCTGTGATGGTTCCAGCCACTCTTGTCACTTGGATCACCATTGTTGTGCTGCTTTACTTCTTTGGGAAGCCTAGGAGGGCTCTTGTGGTGGAGGGGAGGAAGATTACTAGGGAGATTTTTGGAGTTGTGGTTAGGATTTTGTTGAAGGAAGGGAATTTGGTGGCTGCTGTTTGTGCTGTTTTGGGATATTTTGCCCTGTTTAGGAAGACTAATGAGAGCTAA

Protein sequence

MADNKEEDPETIPPQSYALIMKLMSKRRTWVCLFVLVYALILSSSWNFLASILSWYQSQVGDSSSSSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPRRALVVEGRKITREIFGVVVRILLKEGNLVAAVCAVLGYFALFRKTNES

Homology

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BLAST of Sed0018072 vs. NCBI nr
Match: XP_022988973.1 (uncharacterized protein LOC111486173 [Cucurbita maxima])

HSP 1 Score: 280.8 bits (717), Expect = 7.9e-72
Identity = 154/171 (90.06%), Postives = 163/171 (95.32%), Query Frame = 0


Query: 1   MADNKEEDPETIPPQSYALIMKLMSKRRTWVCLFVLVYALILSSSWNFLASILSWYQSQV 60
           MADNKEEDPETI PQ Y+LIM++MSKRRTWVCLFVLVYAL+LSSSWNFLASILSWY+SQV
Sbjct: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60

Query: 61  GDSSSSSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG 120
                SSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG
Sbjct: 61  ---EVSSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG 120

Query: 121 KPRRALVVEGRKITREIFGVVVRILLKEGNLVAAVCAVLGYFALFRKTNES 172
           KP+RALVVEGRKIT+EIFGVV +ILLKEGNLVAAVCAVLGYFALFRK+NES
Sbjct: 121 KPKRALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168

[Close]

BLAST of Sed0018072 vs. NCBI nr
Match: KAG7022922.1 (hypothetical protein SDJN02_16658, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 279.3 bits (713), Expect = 2.3e-71
Identity = 153/171 (89.47%), Postives = 162/171 (94.74%), Query Frame = 0


Query: 1   MADNKEEDPETIPPQSYALIMKLMSKRRTWVCLFVLVYALILSSSWNFLASILSWYQSQV 60
           MADNKEEDPETI PQ Y+LIM++MSKRRTWVCLFVLVYAL+LSSSWNFLASILSWY+SQV
Sbjct: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60

Query: 61  GDSSSSSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG 120
                 SSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG
Sbjct: 61  ----EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG 120

Query: 121 KPRRALVVEGRKITREIFGVVVRILLKEGNLVAAVCAVLGYFALFRKTNES 172
           KP+RALVVEGRKIT+EIFGVV +ILLKEGNLVAAVCAVLGYFALFRK+NES
Sbjct: 121 KPKRALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 167

[Close]

BLAST of Sed0018072 vs. NCBI nr
Match: XP_023531926.1 (uncharacterized protein LOC111794046 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 277.7 bits (709), Expect = 6.7e-71
Identity = 152/171 (88.89%), Postives = 161/171 (94.15%), Query Frame = 0


Query: 1   MADNKEEDPETIPPQSYALIMKLMSKRRTWVCLFVLVYALILSSSWNFLASILSWYQSQV 60
           MADNKEEDPETI PQ Y+LIM++MSKRRTWVCLFVLVYAL+LSSSWNFL SILSWY+SQV
Sbjct: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSWYKSQV 60

Query: 61  GDSSSSSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG 120
                 SSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG
Sbjct: 61  ----EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG 120

Query: 121 KPRRALVVEGRKITREIFGVVVRILLKEGNLVAAVCAVLGYFALFRKTNES 172
           KP+RALVVEGRKIT+EIFGVV +ILLKEGNLVAAVCAVLGYFALFRK+NES
Sbjct: 121 KPKRALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 167

[Close]

BLAST of Sed0018072 vs. NCBI nr
Match: XP_022930709.1 (uncharacterized protein LOC111437107 isoform X1 [Cucurbita moschata])

HSP 1 Score: 277.7 bits (709), Expect = 6.7e-71
Identity = 152/171 (88.89%), Postives = 161/171 (94.15%), Query Frame = 0


Query: 1   MADNKEEDPETIPPQSYALIMKLMSKRRTWVCLFVLVYALILSSSWNFLASILSWYQSQV 60
           MADNKEEDPETI PQ Y+LIM++MSKRRTWVCLFVLVYAL+LSSSWNFLASILSWY+SQV
Sbjct: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60

Query: 61  GDSSSSSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG 120
                  SSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG
Sbjct: 61  -----EVSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG 120

Query: 121 KPRRALVVEGRKITREIFGVVVRILLKEGNLVAAVCAVLGYFALFRKTNES 172
           KP+RALVVEGRKIT+EIFGVV +ILLKEGNLVAAVCAVLGYFALFRK+NES
Sbjct: 121 KPKRALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 166

[Close]

BLAST of Sed0018072 vs. NCBI nr
Match: KAG6589222.1 (hypothetical protein SDJN03_17787, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 277.3 bits (708), Expect = 8.7e-71
Identity = 152/170 (89.41%), Postives = 161/170 (94.71%), Query Frame = 0


Query: 1   MADNKEEDPETIPPQSYALIMKLMSKRRTWVCLFVLVYALILSSSWNFLASILSWYQSQV 60
           MADNKEEDPETI PQ Y+LIM++MSKRRTWVCLFVLVYAL+LSSSWNFLASILSWY+SQV
Sbjct: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60

Query: 61  GDSSSSSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG 120
                 SSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG
Sbjct: 61  ----EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG 120

Query: 121 KPRRALVVEGRKITREIFGVVVRILLKEGNLVAAVCAVLGYFALFRKTNE 171
           KP+RALVVEGRKIT+EIFGVV +ILLKEGNLVAAVCAVLGYFALFRK+NE
Sbjct: 121 KPKRALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNE 166

[Close]

BLAST of Sed0018072 vs. ExPASy TrEMBL
Match: A0A6J1JNW4 (uncharacterized protein LOC111486173 OS=Cucurbita maxima OX=3661 GN=LOC111486173 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.8e-72
Identity = 154/171 (90.06%), Postives = 163/171 (95.32%), Query Frame = 0


Query: 1   MADNKEEDPETIPPQSYALIMKLMSKRRTWVCLFVLVYALILSSSWNFLASILSWYQSQV 60
           MADNKEEDPETI PQ Y+LIM++MSKRRTWVCLFVLVYAL+LSSSWNFLASILSWY+SQV
Sbjct: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60

Query: 61  GDSSSSSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG 120
                SSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG
Sbjct: 61  ---EVSSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG 120

Query: 121 KPRRALVVEGRKITREIFGVVVRILLKEGNLVAAVCAVLGYFALFRKTNES 172
           KP+RALVVEGRKIT+EIFGVV +ILLKEGNLVAAVCAVLGYFALFRK+NES
Sbjct: 121 KPKRALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168

[Close]

BLAST of Sed0018072 vs. ExPASy TrEMBL
Match: A0A6J1ES94 (uncharacterized protein LOC111437107 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437107 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 3.2e-71
Identity = 152/171 (88.89%), Postives = 161/171 (94.15%), Query Frame = 0


Query: 1   MADNKEEDPETIPPQSYALIMKLMSKRRTWVCLFVLVYALILSSSWNFLASILSWYQSQV 60
           MADNKEEDPETI PQ Y+LIM++MSKRRTWVCLFVLVYAL+LSSSWNFLASILSWY+SQV
Sbjct: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60

Query: 61  GDSSSSSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG 120
                  SSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG
Sbjct: 61  -----EVSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG 120

Query: 121 KPRRALVVEGRKITREIFGVVVRILLKEGNLVAAVCAVLGYFALFRKTNES 172
           KP+RALVVEGRKIT+EIFGVV +ILLKEGNLVAAVCAVLGYFALFRK+NES
Sbjct: 121 KPKRALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 166

[Close]

BLAST of Sed0018072 vs. ExPASy TrEMBL
Match: A0A6J1D2X1 (uncharacterized protein LOC111016811 OS=Momordica charantia OX=3673 GN=LOC111016811 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 9.4e-71
Identity = 150/171 (87.72%), Postives = 159/171 (92.98%), Query Frame = 0


Query: 1   MADNKEEDPETIPPQSYALIMKLMSKRRTWVCLFVLVYALILSSSWNFLASILSWYQSQV 60
           MADNKEEDPET PP  Y+L M++MSKRRTWVCLFVLVYALILSSSWNFLASILSWY+SQV
Sbjct: 1   MADNKEEDPETAPPPFYSLFMRVMSKRRTWVCLFVLVYALILSSSWNFLASILSWYKSQV 60

Query: 61  GDSSSSSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG 120
           G        SS+SFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG
Sbjct: 61  G-------VSSASFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG 120

Query: 121 KPRRALVVEGRKITREIFGVVVRILLKEGNLVAAVCAVLGYFALFRKTNES 172
           KPRRALVVEGRKITREIFGVV+RILLKEGN+VAAVCA+LGYFALFRKTN+S
Sbjct: 121 KPRRALVVEGRKITREIFGVVLRILLKEGNVVAAVCALLGYFALFRKTNDS 164

[Close]

BLAST of Sed0018072 vs. ExPASy TrEMBL
Match: A0A5A7SLG9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003370 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68
Identity = 147/176 (83.52%), Postives = 158/176 (89.77%), Query Frame = 0


Query: 1   MADNKEEDPETIPPQ-----SYALIMKLMSKRRTWVCLFVLVYALILSSSWNFLASILSW 60
           MADNKEEDPET PPQ     SY+LIM++MSKRRTWVCLFVLVYAL+LSSSWNFL SILSW
Sbjct: 1   MADNKEEDPETAPPQQAIPKSYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60

Query: 61  YQSQVGDSSSSSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVL 120
           Y+SQV        +SSSSFGWPAIYASLLLG VFGV+SMVAALAVM+PATLVTWI IVVL
Sbjct: 61  YKSQV-------EASSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVL 120

Query: 121 LYFFGKPRRALVVEGRKITREIFGVVVRILLKEGNLVAAVCAVLGYFALFRKTNES 172
           LYFFGKPRR LVVEGRKIT+EIFGVV++ILLKEGNLVAAVCAVLGYFALFRKTNES
Sbjct: 121 LYFFGKPRRLLVVEGRKITKEIFGVVIKILLKEGNLVAAVCAVLGYFALFRKTNES 169

[Close]

BLAST of Sed0018072 vs. ExPASy TrEMBL
Match: A0A1S3C0S4 (uncharacterized protein LOC103495508 OS=Cucumis melo OX=3656 GN=LOC103495508 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68
Identity = 147/176 (83.52%), Postives = 158/176 (89.77%), Query Frame = 0


Query: 1   MADNKEEDPETIPPQ-----SYALIMKLMSKRRTWVCLFVLVYALILSSSWNFLASILSW 60
           MADNKEEDPET PPQ     SY+LIM++MSKRRTWVCLFVLVYAL+LSSSWNFL SILSW
Sbjct: 1   MADNKEEDPETAPPQQAIPKSYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60

Query: 61  YQSQVGDSSSSSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVL 120
           Y+SQV        +SSSSFGWPAIYASLLLG VFGV+SMVAALAVM+PATLVTWI IVVL
Sbjct: 61  YKSQV-------EASSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVL 120

Query: 121 LYFFGKPRRALVVEGRKITREIFGVVVRILLKEGNLVAAVCAVLGYFALFRKTNES 172
           LYFFGKPRR LVVEGRKIT+EIFGVV++ILLKEGNLVAAVCAVLGYFALFRKTNES
Sbjct: 121 LYFFGKPRRLLVVEGRKITKEIFGVVIKILLKEGNLVAAVCAVLGYFALFRKTNES 169

[Close]

BLAST of Sed0018072 vs. TAIR 10
Match: AT1G03730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G03600.1); Has 50 Blast hits to 50 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 190.7 bits (483), Expect = 1.0e-48
Identity = 104/159 (65.41%), Postives = 125/159 (78.62%), Query Frame = 0


Query: 13  PPQSYALIMKLMSKRRTWVCLFVLVYALILSSSWNFLASILSWYQSQVGDSSSSSSSSSS 72
           PP+SY + M++MSKRRTWVCLFV VYA++L+SSWNFL S+LSWY+ Q        +SS S
Sbjct: 15  PPRSYLIFMRIMSKRRTWVCLFVAVYAILLASSWNFLTSVLSWYKLQY-------TSSPS 74

Query: 73  SFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPRRALVVEGRK 132
               PA+YAS++LGAVFG +SMVAA AV VPA +V WI++VVLL FFGK RR LVVE RK
Sbjct: 75  PSRLPAVYASVVLGAVFGAMSMVAAAAVAVPAVMVIWISVVVLLAFFGKSRRVLVVEARK 134

Query: 133 ITREIFGVVVRILLKEGNLVAAVCAVLGYFALFRKTNES 172
           ITRE+FG V ++LLKEGN VAAVCAVLGYF L RK  +S
Sbjct: 135 ITREVFGFVFKVLLKEGNAVAAVCAVLGYFILIRKDFDS 166

[Close]

BLAST of Sed0018072 vs. TAIR 10
Match: AT4G03600.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 176.8 bits (447), Expect = 1.5e-44
Identity = 96/162 (59.26%), Postives = 125/162 (77.16%), Query Frame = 0


Query: 10  ETIPPQSYALIMKLMSKRRTWVCLFVLVYALILSSSWNFLASILSWYQSQVGDSSSSSSS 69
           +T  P+SY + + +MSKRRTWVCLF+ VYA+++SSSWN L S+L+WY+ Q     +SS+S
Sbjct: 4   QTESPRSYHIFITIMSKRRTWVCLFIAVYAILVSSSWNLLRSVLNWYKLQY----TSSNS 63

Query: 70  SSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPRRALVVE 129
             S    PA+YAS++LGA+FG +SMVAA+ V VPA +V WI++VVLL FFGK RR LVVE
Sbjct: 64  DYSPSRLPAVYASVVLGAMFGAMSMVAAMTVAVPAVMVIWISVVVLLAFFGKSRRVLVVE 123

Query: 130 GRKITREIFGVVVRILLKEGNLVAAVCAVLGYFALFRKTNES 172
           GRKITRE+ G V ++LLKEGN+VAA CAVL YF L R+  +S
Sbjct: 124 GRKITREVVGFVFKVLLKEGNVVAAFCAVLAYFLLIRRDFDS 161

[Close]

BLAST of Sed0018072 vs. TAIR 10
Match: AT4G28330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28340.1); Has 48 Blast hits to 48 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 163.3 bits (412), Expect = 1.7e-40
Identity = 95/171 (55.56%), Postives = 126/171 (73.68%), Query Frame = 0


Query: 1   MADNKEEDPETIPPQSYALIMKLMSKRRTWVCLFVLVYALILSSSWNFLASILSWYQSQV 60
           MAD  +E+PET+   SY L ++++SKRRTW CLF++VYA++LSSSWN L SI++WY    
Sbjct: 1   MAD--KEEPETM--TSYKLFLRVISKRRTWACLFLVVYAILLSSSWNSLNSIVNWY---- 60

Query: 61  GDSSSSSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG 120
           G++  +SS      G PAIYAS+LLGAVFGVLSM AAL + VPA +V WI++VV + F G
Sbjct: 61  GENHQTSS------GLPAIYASVLLGAVFGVLSMAAALFIAVPAIVVIWISVVVTMAFAG 120

Query: 121 KPRRALVVEGRKITREIFGVVVRILLKEGNLVAAVCAVLGYFALFRKTNES 172
           K R+ +V+EGRK+T+EI G V R+LLKEGN VA +CA+L YF  F   + S
Sbjct: 121 KSRKRVVIEGRKVTKEIAGFVFRVLLKEGNFVALLCALLAYFVFFNSYSSS 157

[Close]

BLAST of Sed0018072 vs. TAIR 10
Match: AT4G28340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28330.1); Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 151.0 bits (380), Expect = 8.8e-37
Identity = 90/165 (54.55%), Postives = 121/165 (73.33%), Query Frame = 0


Query: 1   MADNKEEDPETIPPQSYALIMKLMSKRRTWVCLFVLVYALILSSSWNFLASILSWYQSQV 60
           MAD +E++  T    SY L ++++SKRRTWVCLF++VYA++LSSS N L SI++WY    
Sbjct: 1   MADKEEQETMT----SYKLFLRVISKRRTWVCLFLVVYAVLLSSSRNSLNSIVNWY---- 60

Query: 61  GDSSSSSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFG 120
           G++  +SS      G PAIYAS+LLGAVFGVLSM AAL + VPA +V WI++VV + F  
Sbjct: 61  GENHQTSS------GLPAIYASVLLGAVFGVLSMAAALFIAVPAIVVIWISVVVTIAFPV 120

Query: 121 KPRRALVVEGRKITREIFGVVVRILLKEGNLVAAVCAVLGYFALF 166
           K R+ +V+EGRK+T+EI G V ++LLKEGN VA +CAV+ YF  F
Sbjct: 121 KSRKKVVIEGRKVTKEIAGYVFKVLLKEGNFVALLCAVIAYFVFF 151

The following BLAST results are available for this feature:

BLAST of Sed0018072 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022988973.1	7.9e-72	90.06	uncharacterized protein LOC111486173 [Cucurbita maxima]	[more]
KAG7022922.1	2.3e-71	89.47	hypothetical protein SDJN02_16658, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023531926.1	6.7e-71	88.89	uncharacterized protein LOC111794046 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022930709.1	6.7e-71	88.89	uncharacterized protein LOC111437107 isoform X1 [Cucurbita moschata]	[more]
KAG6589222.1	8.7e-71	89.41	hypothetical protein SDJN03_17787, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0018072 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0018072 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JNW4	3.8e-72	90.06	uncharacterized protein LOC111486173 OS=Cucurbita maxima OX=3661 GN=LOC111486173...	[more]
A0A6J1ES94	3.2e-71	88.89	uncharacterized protein LOC111437107 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1D2X1	9.4e-71	87.72	uncharacterized protein LOC111016811 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A5A7SLG9	1.1e-68	83.52	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C0S4	1.1e-68	83.52	uncharacterized protein LOC103495508 OS=Cucumis melo OX=3656 GN=LOC103495508 PE=...	[more]

BLAST of Sed0018072 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03730.1	1.0e-48	65.41	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G03600.1	1.5e-44	59.26	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G28330.1	1.7e-40	55.56	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G28340.1	8.8e-37	54.55	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34656:SF1	PYRROLINE-5-CARBOXYLATE REDUCTASE	coord: 7..170
None	No IPR available	PANTHER	PTHR34656	PYRROLINE-5-CARBOXYLATE REDUCTASE	coord: 7..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018072.1	Sed0018072.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane