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Sed0018072 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGAGCGTGGTGAAGATTTTAAGCTTTTTTTTTTCCTTAAAACCCTCACCATTTCTCCCCAAAATATACCCATTTGCTTTTTCATCTTCCAACACCGAAAGAGAAACAAAAAAAGGAAACCCTTAAAAAACCCAGAAACCCCATCAAAGAAGAAACCCCTGAAAAAATTTACAGATTTGTGAATCGAGGGTTGTTGTTTGTTTTTGGGAATGGCAGATAATAAGGAAGAAGACCCAGAAACGATTCCTCCTCAATCGTACGCTTTGATTATGAAATTGATGAGCAAAAGAAGAACATGGGTATGTCTGTTTGTTCTTGTTTATGCCCTAATTCTGTCATCTTCTTGGAATTTTCTTGCTTCTATTCTGTCTTGGTACCAATCCCAAGTGGGAGATTCATCATCATCATCATCTTCTTCTTCTTCTTCATTTGGTTGGCCTGCTATTTATGCTTCTTTGCTGCTTGGGGCTGTTTTTGGGGTTCTTTCCATGGTGGCTGCACTGGCTGTGATGGTTCCAGCCACTCTTGTCACTTGGATCACCATTGTTGTGCTGCTTTACTTCTTTGGGAAGCCTAGGAGGGCTCTTGTGGTGGAGGGGAGGAAGATTACTAGGGAGATTTTTGGAGTTGTGGTTAGGATTTTGTTGAAGGAAGGGAATTTGGTGGCTGCTGTTTGTGCTGTTTTGGGATATTTTGCCCTGTTTAGGAAGACTAATGAGAGCTAATGGTTGCTGGGTTTTGGAGTTTATGGCTGGTTTTGGTGGATTTGGAGGTTTGGATCAAATTGGTGTATCTGAAATTTGGTAAAGTTCTTTGTTTGGTTGCTTATACTTTTAGGTTTTCTGACATTATGTGATGGGGGGTTTTAATGGTTTAGATCTTTCTTGTAACTGTTAGGTTGATGGGTTTACTTGGATTATTACTCTTTCTTCTGTTCTTTTTGTAATGGAGTTTATCTCTTCAGAAATGCTTCATAACTTGGGATTACAGTATGTAATAGAAGGAGTTTGTAACTCATTCATGTAATGAAATGGGTAGTTTTAGAACAAGGGTGGTCTGGAATTGTTCTGATGGTTGTGATTTAACTGTTAGATTCAAAGATACGGTGAACATGAATGAACTTTGAAACAATATTGCATTGTTGTCCCAAAGGG CAGAGCGTGGTGAAGATTTTAAGCTTTTTTTTTTCCTTAAAACCCTCACCATTTCTCCCCAAAATATACCCATTTGCTTTTTCATCTTCCAACACCGAAAGAGAAACAAAAAAAGGAAACCCTTAAAAAACCCAGAAACCCCATCAAAGAAGAAACCCCTGAAAAAATTTACAGATTTGTGAATCGAGGGTTGTTGTTTGTTTTTGGGAATGGCAGATAATAAGGAAGAAGACCCAGAAACGATTCCTCCTCAATCGTACGCTTTGATTATGAAATTGATGAGCAAAAGAAGAACATGGGTATGTCTGTTTGTTCTTGTTTATGCCCTAATTCTGTCATCTTCTTGGAATTTTCTTGCTTCTATTCTGTCTTGGTACCAATCCCAAGTGGGAGATTCATCATCATCATCATCTTCTTCTTCTTCTTCATTTGGTTGGCCTGCTATTTATGCTTCTTTGCTGCTTGGGGCTGTTTTTGGGGTTCTTTCCATGGTGGCTGCACTGGCTGTGATGGTTCCAGCCACTCTTGTCACTTGGATCACCATTGTTGTGCTGCTTTACTTCTTTGGGAAGCCTAGGAGGGCTCTTGTGGTGGAGGGGAGGAAGATTACTAGGGAGATTTTTGGAGTTGTGGTTAGGATTTTGTTGAAGGAAGGGAATTTGGTGGCTGCTGTTTGTGCTGTTTTGGGATATTTTGCCCTGTTTAGGAAGACTAATGAGAGCTAATGGTTGCTGGGTTTTGGAGTTTATGGCTGGTTTTGGTGGATTTGGAGGTTTGGATCAAATTGGTGTATCTGAAATTTGGTAAAGTTCTTTGTTTGGTTGCTTATACTTTTAGGTTTTCTGACATTATGTGATGGGGGGTTTTAATGGTTTAGATCTTTCTTGTAACTGTTAGGTTGATGGGTTTACTTGGATTATTACTCTTTCTTCTGTTCTTTTTGTAATGGAGTTTATCTCTTCAGAAATGCTTCATAACTTGGGATTACAGTATGTAATAGAAGGAGTTTGTAACTCATTCATGTAATGAAATGGGTAGTTTTAGAACAAGGGTGGTCTGGAATTGTTCTGATGGTTGTGATTTAACTGTTAGATTCAAAGATACGGTGAACATGAATGAACTTTGAAACAATATTGCATTGTTGTCCCAAAGGG ATGGCAGATAATAAGGAAGAAGACCCAGAAACGATTCCTCCTCAATCGTACGCTTTGATTATGAAATTGATGAGCAAAAGAAGAACATGGGTATGTCTGTTTGTTCTTGTTTATGCCCTAATTCTGTCATCTTCTTGGAATTTTCTTGCTTCTATTCTGTCTTGGTACCAATCCCAAGTGGGAGATTCATCATCATCATCATCTTCTTCTTCTTCTTCATTTGGTTGGCCTGCTATTTATGCTTCTTTGCTGCTTGGGGCTGTTTTTGGGGTTCTTTCCATGGTGGCTGCACTGGCTGTGATGGTTCCAGCCACTCTTGTCACTTGGATCACCATTGTTGTGCTGCTTTACTTCTTTGGGAAGCCTAGGAGGGCTCTTGTGGTGGAGGGGAGGAAGATTACTAGGGAGATTTTTGGAGTTGTGGTTAGGATTTTGTTGAAGGAAGGGAATTTGGTGGCTGCTGTTTGTGCTGTTTTGGGATATTTTGCCCTGTTTAGGAAGACTAATGAGAGCTAA MADNKEEDPETIPPQSYALIMKLMSKRRTWVCLFVLVYALILSSSWNFLASILSWYQSQVGDSSSSSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPRRALVVEGRKITREIFGVVVRILLKEGNLVAAVCAVLGYFALFRKTNES Homology
BLAST of Sed0018072 vs. NCBI nr
Match: XP_022988973.1 (uncharacterized protein LOC111486173 [Cucurbita maxima]) HSP 1 Score: 280.8 bits (717), Expect = 7.9e-72 Identity = 154/171 (90.06%), Postives = 163/171 (95.32%), Query Frame = 0
BLAST of Sed0018072 vs. NCBI nr
Match: KAG7022922.1 (hypothetical protein SDJN02_16658, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 279.3 bits (713), Expect = 2.3e-71 Identity = 153/171 (89.47%), Postives = 162/171 (94.74%), Query Frame = 0
BLAST of Sed0018072 vs. NCBI nr
Match: XP_023531926.1 (uncharacterized protein LOC111794046 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 277.7 bits (709), Expect = 6.7e-71 Identity = 152/171 (88.89%), Postives = 161/171 (94.15%), Query Frame = 0
BLAST of Sed0018072 vs. NCBI nr
Match: XP_022930709.1 (uncharacterized protein LOC111437107 isoform X1 [Cucurbita moschata]) HSP 1 Score: 277.7 bits (709), Expect = 6.7e-71 Identity = 152/171 (88.89%), Postives = 161/171 (94.15%), Query Frame = 0
BLAST of Sed0018072 vs. NCBI nr
Match: KAG6589222.1 (hypothetical protein SDJN03_17787, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 277.3 bits (708), Expect = 8.7e-71 Identity = 152/170 (89.41%), Postives = 161/170 (94.71%), Query Frame = 0
BLAST of Sed0018072 vs. ExPASy TrEMBL
Match: A0A6J1JNW4 (uncharacterized protein LOC111486173 OS=Cucurbita maxima OX=3661 GN=LOC111486173 PE=4 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 3.8e-72 Identity = 154/171 (90.06%), Postives = 163/171 (95.32%), Query Frame = 0
BLAST of Sed0018072 vs. ExPASy TrEMBL
Match: A0A6J1ES94 (uncharacterized protein LOC111437107 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437107 PE=4 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 3.2e-71 Identity = 152/171 (88.89%), Postives = 161/171 (94.15%), Query Frame = 0
BLAST of Sed0018072 vs. ExPASy TrEMBL
Match: A0A6J1D2X1 (uncharacterized protein LOC111016811 OS=Momordica charantia OX=3673 GN=LOC111016811 PE=4 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 9.4e-71 Identity = 150/171 (87.72%), Postives = 159/171 (92.98%), Query Frame = 0
BLAST of Sed0018072 vs. ExPASy TrEMBL
Match: A0A5A7SLG9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003370 PE=4 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68 Identity = 147/176 (83.52%), Postives = 158/176 (89.77%), Query Frame = 0
BLAST of Sed0018072 vs. ExPASy TrEMBL
Match: A0A1S3C0S4 (uncharacterized protein LOC103495508 OS=Cucumis melo OX=3656 GN=LOC103495508 PE=4 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68 Identity = 147/176 (83.52%), Postives = 158/176 (89.77%), Query Frame = 0
BLAST of Sed0018072 vs. TAIR 10
Match: AT1G03730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G03600.1); Has 50 Blast hits to 50 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 190.7 bits (483), Expect = 1.0e-48 Identity = 104/159 (65.41%), Postives = 125/159 (78.62%), Query Frame = 0
BLAST of Sed0018072 vs. TAIR 10
Match: AT4G03600.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 176.8 bits (447), Expect = 1.5e-44 Identity = 96/162 (59.26%), Postives = 125/162 (77.16%), Query Frame = 0
BLAST of Sed0018072 vs. TAIR 10
Match: AT4G28330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28340.1); Has 48 Blast hits to 48 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 163.3 bits (412), Expect = 1.7e-40 Identity = 95/171 (55.56%), Postives = 126/171 (73.68%), Query Frame = 0
BLAST of Sed0018072 vs. TAIR 10
Match: AT4G28340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28330.1); Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 151.0 bits (380), Expect = 8.8e-37 Identity = 90/165 (54.55%), Postives = 121/165 (73.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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