Homology
BLAST of Sed0018063 vs. NCBI nr
Match:
XP_023542690.1 (pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 692.6 bits (1786), Expect = 2.1e-195
Identity = 341/405 (84.20%), Postives = 377/405 (93.09%), Query Frame = 0
Query: 1 MAFLSRLRHAFPSNSLCINHRLPYRSLSTILSPDSTNPSSAEQKSKAALSLLRSENDPDR 60
MAFL RLRHAFPSN+ IN+RL YRSLSTILSPDSTNP SA+QKS+AALSLL+SE++P+R
Sbjct: 1 MAFLYRLRHAFPSNATYINYRLHYRSLSTILSPDSTNPLSAKQKSRAALSLLKSEDNPER 60
Query: 61 IIDICRAATLTPESHLDRLVFSVAVSKLSASKNFDGIRQFLEEMRSRPDLKNERFACHAI 120
IIDICRAATLTPESHLDR+ FSVA+SKLS SK+FDGIR+FLEE++SRPDLKNERFACHAI
Sbjct: 61 IIDICRAATLTPESHLDRIAFSVAISKLSESKHFDGIRRFLEELKSRPDLKNERFACHAI 120
Query: 121 VLYGQANMLDHAITTFKQIGELGMRYSVKSLNALLFACHLAKDYKELKRVFMDFPKKYGI 180
VLYGQANMLDHAI+TFKQIGELG+ +SVKSLNALLFAC+LAKDYKELKRVFM+FPK YGI
Sbjct: 121 VLYGQANMLDHAISTFKQIGELGVCHSVKSLNALLFACNLAKDYKELKRVFMEFPKIYGI 180
Query: 181 EVDLNAYNRVIKGFSELGSTSEVYTILAEMDRKDVKPNATTFTNWLAGCYKEEKYEDVEK 240
E DL+ YNRVIK FSE GS+S VY+ILAEMDRKD+KPNATTF NWLAGCYKEEKYEDVEK
Sbjct: 181 EPDLDTYNRVIKAFSESGSSSAVYSILAEMDRKDIKPNATTFANWLAGCYKEEKYEDVEK 240
Query: 241 VMKLMKKYGVRSGVSTYNAKIKGLCKLKKSSEAKVLFDGMLTRGMKPNSVTFCELIHGFC 300
V+KLM+KYGV GVSTYNA+I+ LCKLK+SSEAK LFDGML+RGMKPNSVT+CELIHGFC
Sbjct: 241 VIKLMEKYGVWRGVSTYNARIQSLCKLKRSSEAKALFDGMLSRGMKPNSVTYCELIHGFC 300
Query: 301 KEGNLDEAKSLFKLMNDSGFQPDSDCYFNLIFFLCRGGDFETAFKFCVESMEKGWFPSIS 360
KEGNLDEAK+LFK M +SG QPDSDCYF LI+FLCRGGD+ETAFK C ESMEKGWFP+I+
Sbjct: 301 KEGNLDEAKTLFKRMINSGCQPDSDCYFTLIYFLCRGGDYETAFKLCGESMEKGWFPNIT 360
Query: 361 AMKSLVDGLVSISKVDEAKQLIGQIKERFSKNAEKWNEIEAGLPQ 406
MKSLVDGLVSISKVDEAKQLIGQIKERFSKN E WNEIEAGLPQ
Sbjct: 361 TMKSLVDGLVSISKVDEAKQLIGQIKERFSKNVETWNEIEAGLPQ 405
BLAST of Sed0018063 vs. NCBI nr
Match:
XP_022954817.1 (pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like [Cucurbita moschata] >XP_022954818.1 pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like [Cucurbita moschata])
HSP 1 Score: 686.4 bits (1770), Expect = 1.5e-193
Identity = 337/405 (83.21%), Postives = 374/405 (92.35%), Query Frame = 0
Query: 1 MAFLSRLRHAFPSNSLCINHRLPYRSLSTILSPDSTNPSSAEQKSKAALSLLRSENDPDR 60
MA L RLRHAFPSN+ IN+RL YRSLSTILSPDSTNP SA+QKS+AALSLL+SE++P+R
Sbjct: 1 MALLYRLRHAFPSNATYINYRLHYRSLSTILSPDSTNPLSAKQKSRAALSLLKSEDNPER 60
Query: 61 IIDICRAATLTPESHLDRLVFSVAVSKLSASKNFDGIRQFLEEMRSRPDLKNERFACHAI 120
IIDICRAATLTPESHLDR+ FSVA+SKLS SK+FDGIR+FLEE++SRPDLKNERFACHAI
Sbjct: 61 IIDICRAATLTPESHLDRIAFSVAISKLSESKHFDGIRRFLEELKSRPDLKNERFACHAI 120
Query: 121 VLYGQANMLDHAITTFKQIGELGMRYSVKSLNALLFACHLAKDYKELKRVFMDFPKKYGI 180
VLYGQA MLDHAI+TFKQI ELG R SVKSLNALLFAC+LAKDYKELKRVFM+FPK YGI
Sbjct: 121 VLYGQAKMLDHAISTFKQIDELGARQSVKSLNALLFACNLAKDYKELKRVFMEFPKVYGI 180
Query: 181 EVDLNAYNRVIKGFSELGSTSEVYTILAEMDRKDVKPNATTFTNWLAGCYKEEKYEDVEK 240
E DL+ YNRVIK FSE GS+S VY+ILAEMDRKD+KPNATTF NWLAGCYKEEKYEDVEK
Sbjct: 181 EPDLDTYNRVIKAFSESGSSSAVYSILAEMDRKDIKPNATTFANWLAGCYKEEKYEDVEK 240
Query: 241 VMKLMKKYGVRSGVSTYNAKIKGLCKLKKSSEAKVLFDGMLTRGMKPNSVTFCELIHGFC 300
V+KLM+KYGVR GVSTYNA+I+ LCKLK+SSEAK LFDGML+RGMKPNSVT+CELIHGFC
Sbjct: 241 VIKLMEKYGVRRGVSTYNARIQSLCKLKRSSEAKALFDGMLSRGMKPNSVTYCELIHGFC 300
Query: 301 KEGNLDEAKSLFKLMNDSGFQPDSDCYFNLIFFLCRGGDFETAFKFCVESMEKGWFPSIS 360
KEGNLDEAK+LFK M +SG QPDSDCYF LI+FLCRGGD++TAFK C +S+EKGWFP+I+
Sbjct: 301 KEGNLDEAKTLFKRMMNSGCQPDSDCYFTLIYFLCRGGDYDTAFKLCGQSIEKGWFPNIT 360
Query: 361 AMKSLVDGLVSISKVDEAKQLIGQIKERFSKNAEKWNEIEAGLPQ 406
MKSLVDGLVSISKVDEAKQLIGQIKERFSKN E WNEIEAGLPQ
Sbjct: 361 TMKSLVDGLVSISKVDEAKQLIGQIKERFSKNVETWNEIEAGLPQ 405
BLAST of Sed0018063 vs. NCBI nr
Match:
KAG6573197.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012373.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 684.9 bits (1766), Expect = 4.3e-193
Identity = 335/405 (82.72%), Postives = 375/405 (92.59%), Query Frame = 0
Query: 1 MAFLSRLRHAFPSNSLCINHRLPYRSLSTILSPDSTNPSSAEQKSKAALSLLRSENDPDR 60
MA L RLRHAFPSN+ IN+RL YRSLSTILSPDSTNP SA+QKS+ ALSLL+SE++P+R
Sbjct: 1 MALLYRLRHAFPSNATYINYRLHYRSLSTILSPDSTNPLSAKQKSRTALSLLKSEDNPER 60
Query: 61 IIDICRAATLTPESHLDRLVFSVAVSKLSASKNFDGIRQFLEEMRSRPDLKNERFACHAI 120
IIDICRAATLTPESHLDR+ FSVA+SKLS SK+FDGIR+FLEE++SRPDLKNERFACHAI
Sbjct: 61 IIDICRAATLTPESHLDRIAFSVAISKLSESKHFDGIRRFLEELKSRPDLKNERFACHAI 120
Query: 121 VLYGQANMLDHAITTFKQIGELGMRYSVKSLNALLFACHLAKDYKELKRVFMDFPKKYGI 180
VLYGQA MLDHAI+TFKQI ELG+R+SVKSLNALLFAC+LAKDYKELKRVFM+FPK YGI
Sbjct: 121 VLYGQAKMLDHAISTFKQIDELGVRHSVKSLNALLFACNLAKDYKELKRVFMEFPKIYGI 180
Query: 181 EVDLNAYNRVIKGFSELGSTSEVYTILAEMDRKDVKPNATTFTNWLAGCYKEEKYEDVEK 240
E DL+ YNRVIK FSE GS+S VY+ILAEMDRKD+KPNA+TF NWLAGCYKEEKYEDVEK
Sbjct: 181 EPDLDTYNRVIKAFSESGSSSAVYSILAEMDRKDIKPNASTFANWLAGCYKEEKYEDVEK 240
Query: 241 VMKLMKKYGVRSGVSTYNAKIKGLCKLKKSSEAKVLFDGMLTRGMKPNSVTFCELIHGFC 300
V+KLM+KYGVR GVSTYNA+I+ LCKLK+SSEAK LFDGML+RGMKPNSVT+CELIHGFC
Sbjct: 241 VIKLMEKYGVRRGVSTYNARIQSLCKLKRSSEAKALFDGMLSRGMKPNSVTYCELIHGFC 300
Query: 301 KEGNLDEAKSLFKLMNDSGFQPDSDCYFNLIFFLCRGGDFETAFKFCVESMEKGWFPSIS 360
KEGNLDEAK+LFK M +SG QPDSDCYF LI+FLCRGGD++TAFK C +S+EKGWFP+I+
Sbjct: 301 KEGNLDEAKTLFKRMMNSGCQPDSDCYFTLIYFLCRGGDYDTAFKLCGQSIEKGWFPNIT 360
Query: 361 AMKSLVDGLVSISKVDEAKQLIGQIKERFSKNAEKWNEIEAGLPQ 406
MKSLVDGLVSISKVDEAKQLIGQIKERFSKN E WNEIEAGLPQ
Sbjct: 361 TMKSLVDGLVSISKVDEAKQLIGQIKERFSKNVETWNEIEAGLPQ 405
BLAST of Sed0018063 vs. NCBI nr
Match:
XP_023001276.1 (pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like [Cucurbita maxima] >XP_023001277.1 pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like [Cucurbita maxima])
HSP 1 Score: 676.4 bits (1744), Expect = 1.5e-190
Identity = 333/404 (82.43%), Postives = 368/404 (91.09%), Query Frame = 0
Query: 1 MAFLSRLRHAFPSNSLCINHRLPYRSLSTILSPDSTNPSSAEQKSKAALSLLRSENDPDR 60
MA L RLR+ FPSNS INHRL YR LSTILSPDSTNP SA+QKS+AALSLL+ E++P+R
Sbjct: 1 MALLYRLRNVFPSNSTYINHRLHYRCLSTILSPDSTNPLSAKQKSRAALSLLKVEDNPER 60
Query: 61 IIDICRAATLTPESHLDRLVFSVAVSKLSASKNFDGIRQFLEEMRSRPDLKNERFACHAI 120
IIDICRAATLTPESHLDR+ FSVA+SKLS SK+FDGIR FLEE++SRPDLKNERFACHAI
Sbjct: 61 IIDICRAATLTPESHLDRIAFSVAISKLSESKHFDGIRLFLEELKSRPDLKNERFACHAI 120
Query: 121 VLYGQANMLDHAITTFKQIGELGMRYSVKSLNALLFACHLAKDYKELKRVFMDFPKKYGI 180
+LYGQANMLDHAI TFKQI ELG+R+SVKSLNALLFAC++AKDYKELKRVF++FPK YGI
Sbjct: 121 ILYGQANMLDHAIRTFKQIDELGVRHSVKSLNALLFACNVAKDYKELKRVFIEFPKIYGI 180
Query: 181 EVDLNAYNRVIKGFSELGSTSEVYTILAEMDRKDVKPNATTFTNWLAGCYKEEKYEDVEK 240
E DL+ YNRVIK FSELGS+S VY+I+AEMDRKDVKPNATTF NWLAGCYKEEKYEDVEK
Sbjct: 181 EPDLDTYNRVIKAFSELGSSSAVYSIVAEMDRKDVKPNATTFANWLAGCYKEEKYEDVEK 240
Query: 241 VMKLMKKYGVRSGVSTYNAKIKGLCKLKKSSEAKVLFDGMLTRGMKPNSVTFCELIHGFC 300
V+ LM KYGVR GVSTYNA+I LCKLKKSSEAK LFDGML+RGMKPNSVT+CELIHGFC
Sbjct: 241 VINLMGKYGVRRGVSTYNARILSLCKLKKSSEAKALFDGMLSRGMKPNSVTYCELIHGFC 300
Query: 301 KEGNLDEAKSLFKLMNDSGFQPDSDCYFNLIFFLCRGGDFETAFKFCVESMEKGWFPSIS 360
KEGNLDEAK+LFK M +SG QPDSDCYF L++FLCRGGD++ AFK C ESMEKGW P+I+
Sbjct: 301 KEGNLDEAKNLFKRMINSGCQPDSDCYFTLVYFLCRGGDYDAAFKICGESMEKGWVPNIT 360
Query: 361 AMKSLVDGLVSISKVDEAKQLIGQIKERFSKNAEKWNEIEAGLP 405
MKSLVDGLVSISKVDEAKQLIGQIKERFSKN EKWNEIEAGLP
Sbjct: 361 TMKSLVDGLVSISKVDEAKQLIGQIKERFSKNVEKWNEIEAGLP 404
BLAST of Sed0018063 vs. NCBI nr
Match:
XP_022140127.1 (pentatricopeptide repeat-containing protein At1g61870, mitochondrial [Momordica charantia])
HSP 1 Score: 675.2 bits (1741), Expect = 3.4e-190
Identity = 331/405 (81.73%), Postives = 369/405 (91.11%), Query Frame = 0
Query: 1 MAFLSRLRHAFPSNSLCINHRLPYRSLSTILSPDSTNPSSAEQKSKAALSLLRSENDPDR 60
MA L+RLRHAFPSNS +N+RL YRSLS+ILSPDS NP SA+QKS+AALSLL++E++P+R
Sbjct: 1 MALLNRLRHAFPSNSTYMNYRLHYRSLSSILSPDSANPMSAKQKSRAALSLLKAEDNPER 60
Query: 61 IIDICRAATLTPESHLDRLVFSVAVSKLSASKNFDGIRQFLEEMRSRPDLKNERFACHAI 120
IIDICRAATLTPE HLDR+ FSVA+SKLS SK+FDGIR+FLEE++SRPDLKNERFACHAI
Sbjct: 61 IIDICRAATLTPELHLDRIAFSVAISKLSESKHFDGIRRFLEELKSRPDLKNERFACHAI 120
Query: 121 VLYGQANMLDHAITTFKQIGELGMRYSVKSLNALLFACHLAKDYKELKRVFMDFPKKYGI 180
VLYGQANMLDHAI FKQI ELG+R+SVKSLNALLFAC+LAKDYKELKRV+M+FPK YGI
Sbjct: 121 VLYGQANMLDHAIRAFKQIDELGVRHSVKSLNALLFACNLAKDYKELKRVYMEFPKIYGI 180
Query: 181 EVDLNAYNRVIKGFSELGSTSEVYTILAEMDRKDVKPNATTFTNWLAGCYKEEKYEDVEK 240
E DL YNRVIK FSE GS+S VY+I+AEMDRKDVKPNATTF NWLAGCYKEEKYEDVEK
Sbjct: 181 EPDLETYNRVIKAFSESGSSSAVYSIVAEMDRKDVKPNATTFANWLAGCYKEEKYEDVEK 240
Query: 241 VMKLMKKYGVRSGVSTYNAKIKGLCKLKKSSEAKVLFDGMLTRGMKPNSVTFCELIHGFC 300
V+KLM+KYGVR GV YNA+I+ LCKLKKSSEAK LFDGML+RGMKPNSVT+CELIHGFC
Sbjct: 241 VIKLMEKYGVRRGVGIYNARIQSLCKLKKSSEAKALFDGMLSRGMKPNSVTYCELIHGFC 300
Query: 301 KEGNLDEAKSLFKLMNDSGFQPDSDCYFNLIFFLCRGGDFETAFKFCVESMEKGWFPSIS 360
KEGNLDEAKSLFK M +SG QPDSDCYF ++FFLCRGGD+ETA K C ESMEKGW P+I+
Sbjct: 301 KEGNLDEAKSLFKRMINSGCQPDSDCYFTMVFFLCRGGDYETALKICGESMEKGWVPNIT 360
Query: 361 AMKSLVDGLVSISKVDEAKQLIGQIKERFSKNAEKWNEIEAGLPQ 406
MKSLVDGLVSISKV+EAKQLIGQIKERFSKN EKWNEIEA LPQ
Sbjct: 361 TMKSLVDGLVSISKVEEAKQLIGQIKERFSKNVEKWNEIEAALPQ 405
BLAST of Sed0018063 vs. ExPASy Swiss-Prot
Match:
Q8LE47 (Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PPR336 PE=2 SV=2)
HSP 1 Score: 471.1 bits (1211), Expect = 1.3e-131
Identity = 239/411 (58.15%), Postives = 307/411 (74.70%), Query Frame = 0
Query: 1 MAFLSRLRHAFPSNSLC--INHRLPYRSL---STILSPDSTNPSSAEQKSKAALSLLRSE 60
MA LSR+R S SL +N RSL STILSPDS P ++++KSKAALSLL+SE
Sbjct: 1 MALLSRIR---SSTSLFRHLNASPQIRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSE 60
Query: 61 NDPDRIIDICRAATLTPESHLDRLVFSVAVSKLSASKNFDGIRQFLEE-MRSRPDLKNER 120
DPDRI++ICRAA+LTP+ +DR+ FS AV L+ K+F + L+ + +RPDLK+ER
Sbjct: 61 KDPDRILEICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSER 120
Query: 121 FACHAIVLYGQANMLDHAITTFKQIGELGMRYSVKSLNALLFACHLAKDYKELKRVFMDF 180
FA HAIVLY QANMLDH++ F+ + + + +VKSLNALLFAC +AKDYKE KRV+++
Sbjct: 121 FAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEM 180
Query: 181 PKKYGIEVDLNAYNRVIKGFSELGSTSEVYTILAEMDRKDVKPNATTFTNWLAGCYKEEK 240
PK YGIE DL YNR+IK F E GS S Y+I+AEM+RK +KPN+++F ++G Y E+K
Sbjct: 181 PKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDK 240
Query: 241 YEDVEKVMKLMKKYGVRSGVSTYNAKIKGLCKLKKSSEAKVLFDGMLTRGMKPNSVTFCE 300
++V KV+ +MK GV GVSTYN +I+ LCK KKS EAK L DGML+ GMKPN+VT+
Sbjct: 241 SDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSH 300
Query: 301 LIHGFCKEGNLDEAKSLFKLMNDSGFQPDSDCYFNLIFFLCRGGDFETAFKFCVESMEKG 360
LIHGFC E + +EAK LFK+M + G +PDS+CYF LI++LC+GGDFETA C ESMEK
Sbjct: 301 LIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKN 360
Query: 361 WFPSISAMKSLVDGLVSISKVDEAKQLIGQIKERFSKNAEKWNEIEAGLPQ 406
W PS S MKSLV+GL SKV+EAK+LIGQ+KE+F++N E WNE+EA LPQ
Sbjct: 361 WVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRNVELWNEVEAALPQ 408
BLAST of Sed0018063 vs. ExPASy Swiss-Prot
Match:
Q9SAB4 (Pentatricopeptide repeat-containing protein At1g11630, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g11630 PE=1 SV=1)
HSP 1 Score: 422.2 bits (1084), Expect = 6.8e-117
Identity = 216/405 (53.33%), Postives = 292/405 (72.10%), Query Frame = 0
Query: 1 MAFLSRLRHAFPSNSLCINHRLPYRSLSTILSPDSTNPSSAEQKSKAALSLLRSENDPDR 60
MAFL R+R + RL S S T S ++KS+ LSLL+SEN+PDR
Sbjct: 1 MAFLFRIRTSEFILQKATQFRLKSSSSSIFTLKSLT---SKQKKSRDTLSLLKSENNPDR 60
Query: 61 IIDICRAATLTPESHLDRLVFSVAVSKLSASKNFDGIRQFLEE-MRSRPDLKNERFACHA 120
I++ICR+ +L+P+ H+DR++FSVAV L+ K+F + Q L+ ++++PD K+E FA A
Sbjct: 61 ILEICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRA 120
Query: 121 IVLYGQANMLDHAITTFKQIGELGMRYSVKSLNALLFACHLAKDYKELKRVFMDFPKKYG 180
I+LYG+ANMLD +I TF+ + + + +VKSLNALLFAC +AKDYKE RV+++ PK YG
Sbjct: 121 IILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYG 180
Query: 181 IEVDLNAYNRVIKGFSELGSTSEVYTILAEMDRKDVKPNATTFTNWLAGCYKEEKYEDVE 240
IE DL YNR+I+ E GSTS Y+I+AEM+RK +KP A +F + G YKEEK+++V
Sbjct: 181 IEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVR 240
Query: 241 KVMKLMKKYGVRSGVSTYNAKIKGLCKLKKSSEAKVLFDGMLTRGMKPNSVTFCELIHGF 300
KVM++M ++GV GV+TYN I+ LCK KKS+EAK L DG+++ M+PNSVT+ LIHGF
Sbjct: 241 KVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGF 300
Query: 301 CKEGNLDEAKSLFKLMNDSGFQPDSDCYFNLIFFLCRGGDFETAFKFCVESMEKGWFPSI 360
C E NLDEA +LF++M +G++PDS+CYF LI LC+GGDFETA C ESMEK W PS
Sbjct: 301 CSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSF 360
Query: 361 SAMKSLVDGLVSISKVDEAKQLIGQIKERFSKNAEKWNEIEAGLP 405
S MK LV+GL S SKVDEAK+LI +KE+F++N + WNE+EA LP
Sbjct: 361 SVMKWLVNGLASRSKVDEAKELIAVVKEKFTRNVDLWNEVEAALP 402
BLAST of Sed0018063 vs. ExPASy Swiss-Prot
Match:
Q9LG23 (Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g55890 PE=1 SV=1)
HSP 1 Score: 192.6 bits (488), Expect = 8.8e-48
Identity = 110/359 (30.64%), Postives = 191/359 (53.20%), Query Frame = 0
Query: 24 YRSLSTILSPDSTNPSSAEQKSKAALSLLRSENDPDRIIDICRAATLTPESHLDRLVFSV 83
+ S +T++S + ++ K+ SL+ E +P RI++ + A + + V+
Sbjct: 20 FSSAATVVSEPTAVTAAISPPQKSLTSLVNGERNPKRIVEKFKKACESERFRTNIAVYDR 79
Query: 84 AVSKLSASKNFDGIRQFLEEMRSRPDLKNERFACHAIVLYGQANMLDHAITTFKQIGELG 143
V +L A+K + + LEE + D+ E FA I LYG+A M ++A F+++
Sbjct: 80 TVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRD 139
Query: 144 MRYSVKSLNALLFACHLAKDYKELKRVFMDFPKKYGIEVDLNAYNRVIKGFSELGSTSEV 203
+ SV S NALL A L+K + ++ +F + P K I+ D+ +YN +IK E S E
Sbjct: 140 CKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEA 199
Query: 204 YTILAEMDRKDVKPNATTFTNWLAGCYKEEKYEDVEKVMKLMKKYGVRSGVSTYNAKIKG 263
+L E++ K +KP+ TF L Y + ++E E++ M + V + TYNA++ G
Sbjct: 200 VALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLG 259
Query: 264 LCKLKKSSEAKVLFDGMLTRGMKPNSVTFCELIHGFCKEGNLDEAKSLFKLMNDSGFQPD 323
L KS E LF + G+KP+ +F +I G EG +DEA++ +K + G++PD
Sbjct: 260 LANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPD 319
Query: 324 SDCYFNLIFFLCRGGDFETAFKFCVESMEKGWFPSISAMKSLVDGLVSISKVDEAKQLI 383
+ L+ +C+ GDFE+A + E+ K + + ++ LVD LV SK +EA++++
Sbjct: 320 KATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIV 378
BLAST of Sed0018063 vs. ExPASy Swiss-Prot
Match:
Q9LK57 (Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g13160 PE=1 SV=1)
HSP 1 Score: 191.4 bits (485), Expect = 2.0e-47
Identity = 106/334 (31.74%), Postives = 180/334 (53.89%), Query Frame = 0
Query: 49 LSLLRSENDPDRIIDICRAATLTPESHLDRLVFSVAVSKLSASKNFDGIRQFLEEMRSRP 108
++L+ E DP I + + A + V+ V +L+A+K F+ + + LEE P
Sbjct: 42 ITLVNDERDPKFITEKFKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYP 101
Query: 109 DLKNERFACHAIVLYGQANMLDHAITTFKQIGELGMRYSVKSLNALLFACHLAKDYKELK 168
++ E F I LYG+ M ++A F ++ E + + S NALL AC +K + ++
Sbjct: 102 NMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVE 161
Query: 169 RVFMDFPKKYGIEVDLNAYNRVIKGFSELGSTSEVYTILAEMDRKDVKPNATTFTNWLAG 228
+F + P K IE D+ +YN +IKG GS +E ++ E++ K +KP+ TF L
Sbjct: 162 GIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHE 221
Query: 229 CYKEEKYEDVEKVMKLMKKYGVRSGVSTYNAKIKGLCKLKKSSEAKVLFDGMLTRGMKPN 288
Y + K+E+ E++ M + V+ + +YNA++ GL KS E LFD + +KP+
Sbjct: 222 SYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPD 281
Query: 289 SVTFCELIHGFCKEGNLDEAKSLFKLMNDSGFQPDSDCYFNLIFFLCRGGDFETAFKFCV 348
TF +I GF EG LDEA + +K + +G +P + +L+ +C+ GD E+A++ C
Sbjct: 282 VFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCK 341
Query: 349 ESMEKGWFPSISAMKSLVDGLVSISKVDEAKQLI 383
E K + ++ +VD LV SK DEA++++
Sbjct: 342 EIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIV 375
BLAST of Sed0018063 vs. ExPASy Swiss-Prot
Match:
Q8GW57 (Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80150 PE=2 SV=2)
HSP 1 Score: 186.4 bits (472), Expect = 6.3e-46
Identity = 104/358 (29.05%), Postives = 184/358 (51.40%), Query Frame = 0
Query: 31 LSPDSTNPSSAEQKSKAALSLLRSENDPDRIIDICRAATLTPESHLDRLVFSVAVSKLSA 90
+S +S + + AL L+SE DP+++ ++ +A +R F VS+L+
Sbjct: 24 VSTESNQIQGLKPLEEPALVKLKSERDPEKLYNLFKANATNRLVIENRFAFEDTVSRLAG 83
Query: 91 SKNFDGIRQFLEEMRSRPDLKNERFACHAIVLYGQANMLDHAITTFKQIGELGMRYSVKS 150
+ D I LE ++ P + E F I+LYG+A M A+ TF + G + SVKS
Sbjct: 84 AGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKS 143
Query: 151 LNALLFACHLAKDYKELKRVFMDFPKKYGIEVDLNAYNRVIKGFSELGSTSEVYTILAEM 210
NA L D + D P KYGI++D ++N IK F ELG Y + EM
Sbjct: 144 FNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREM 203
Query: 211 DRKDVKPNATTFTNWLAGCYKEEKYEDVEKVMKLMKKYGVRSGVSTYNAKIKGLCKLKKS 270
++ + P+ T+T ++ YK E+ + LM G + ++T+N +I+ L +++
Sbjct: 204 EKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRA 263
Query: 271 SEAKVLFDGMLTRGMKPNSVTFCELIHGFCKEGNLDEAKSLFKLMNDSGFQPDSDCYFNL 330
+A L M ++P+S+T+ +I GF D A+ ++ M+ G++P+ Y +
Sbjct: 264 WDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTM 323
Query: 331 IFFLCRGGDFETAFKFCVESMEKGWFPSISAMKSLVDGLVSISKVDEAKQLIGQIKER 389
I +LC+ G+F+ A+ C + M K W+P++ ++ L+ GLV ++D+AK ++ + R
Sbjct: 324 IHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRR 381
BLAST of Sed0018063 vs. ExPASy TrEMBL
Match:
A0A6J1GRY2 (pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111456964 PE=4 SV=1)
HSP 1 Score: 686.4 bits (1770), Expect = 7.1e-194
Identity = 337/405 (83.21%), Postives = 374/405 (92.35%), Query Frame = 0
Query: 1 MAFLSRLRHAFPSNSLCINHRLPYRSLSTILSPDSTNPSSAEQKSKAALSLLRSENDPDR 60
MA L RLRHAFPSN+ IN+RL YRSLSTILSPDSTNP SA+QKS+AALSLL+SE++P+R
Sbjct: 1 MALLYRLRHAFPSNATYINYRLHYRSLSTILSPDSTNPLSAKQKSRAALSLLKSEDNPER 60
Query: 61 IIDICRAATLTPESHLDRLVFSVAVSKLSASKNFDGIRQFLEEMRSRPDLKNERFACHAI 120
IIDICRAATLTPESHLDR+ FSVA+SKLS SK+FDGIR+FLEE++SRPDLKNERFACHAI
Sbjct: 61 IIDICRAATLTPESHLDRIAFSVAISKLSESKHFDGIRRFLEELKSRPDLKNERFACHAI 120
Query: 121 VLYGQANMLDHAITTFKQIGELGMRYSVKSLNALLFACHLAKDYKELKRVFMDFPKKYGI 180
VLYGQA MLDHAI+TFKQI ELG R SVKSLNALLFAC+LAKDYKELKRVFM+FPK YGI
Sbjct: 121 VLYGQAKMLDHAISTFKQIDELGARQSVKSLNALLFACNLAKDYKELKRVFMEFPKVYGI 180
Query: 181 EVDLNAYNRVIKGFSELGSTSEVYTILAEMDRKDVKPNATTFTNWLAGCYKEEKYEDVEK 240
E DL+ YNRVIK FSE GS+S VY+ILAEMDRKD+KPNATTF NWLAGCYKEEKYEDVEK
Sbjct: 181 EPDLDTYNRVIKAFSESGSSSAVYSILAEMDRKDIKPNATTFANWLAGCYKEEKYEDVEK 240
Query: 241 VMKLMKKYGVRSGVSTYNAKIKGLCKLKKSSEAKVLFDGMLTRGMKPNSVTFCELIHGFC 300
V+KLM+KYGVR GVSTYNA+I+ LCKLK+SSEAK LFDGML+RGMKPNSVT+CELIHGFC
Sbjct: 241 VIKLMEKYGVRRGVSTYNARIQSLCKLKRSSEAKALFDGMLSRGMKPNSVTYCELIHGFC 300
Query: 301 KEGNLDEAKSLFKLMNDSGFQPDSDCYFNLIFFLCRGGDFETAFKFCVESMEKGWFPSIS 360
KEGNLDEAK+LFK M +SG QPDSDCYF LI+FLCRGGD++TAFK C +S+EKGWFP+I+
Sbjct: 301 KEGNLDEAKTLFKRMMNSGCQPDSDCYFTLIYFLCRGGDYDTAFKLCGQSIEKGWFPNIT 360
Query: 361 AMKSLVDGLVSISKVDEAKQLIGQIKERFSKNAEKWNEIEAGLPQ 406
MKSLVDGLVSISKVDEAKQLIGQIKERFSKN E WNEIEAGLPQ
Sbjct: 361 TMKSLVDGLVSISKVDEAKQLIGQIKERFSKNVETWNEIEAGLPQ 405
BLAST of Sed0018063 vs. ExPASy TrEMBL
Match:
A0A6J1KI60 (pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111495453 PE=4 SV=1)
HSP 1 Score: 676.4 bits (1744), Expect = 7.4e-191
Identity = 333/404 (82.43%), Postives = 368/404 (91.09%), Query Frame = 0
Query: 1 MAFLSRLRHAFPSNSLCINHRLPYRSLSTILSPDSTNPSSAEQKSKAALSLLRSENDPDR 60
MA L RLR+ FPSNS INHRL YR LSTILSPDSTNP SA+QKS+AALSLL+ E++P+R
Sbjct: 1 MALLYRLRNVFPSNSTYINHRLHYRCLSTILSPDSTNPLSAKQKSRAALSLLKVEDNPER 60
Query: 61 IIDICRAATLTPESHLDRLVFSVAVSKLSASKNFDGIRQFLEEMRSRPDLKNERFACHAI 120
IIDICRAATLTPESHLDR+ FSVA+SKLS SK+FDGIR FLEE++SRPDLKNERFACHAI
Sbjct: 61 IIDICRAATLTPESHLDRIAFSVAISKLSESKHFDGIRLFLEELKSRPDLKNERFACHAI 120
Query: 121 VLYGQANMLDHAITTFKQIGELGMRYSVKSLNALLFACHLAKDYKELKRVFMDFPKKYGI 180
+LYGQANMLDHAI TFKQI ELG+R+SVKSLNALLFAC++AKDYKELKRVF++FPK YGI
Sbjct: 121 ILYGQANMLDHAIRTFKQIDELGVRHSVKSLNALLFACNVAKDYKELKRVFIEFPKIYGI 180
Query: 181 EVDLNAYNRVIKGFSELGSTSEVYTILAEMDRKDVKPNATTFTNWLAGCYKEEKYEDVEK 240
E DL+ YNRVIK FSELGS+S VY+I+AEMDRKDVKPNATTF NWLAGCYKEEKYEDVEK
Sbjct: 181 EPDLDTYNRVIKAFSELGSSSAVYSIVAEMDRKDVKPNATTFANWLAGCYKEEKYEDVEK 240
Query: 241 VMKLMKKYGVRSGVSTYNAKIKGLCKLKKSSEAKVLFDGMLTRGMKPNSVTFCELIHGFC 300
V+ LM KYGVR GVSTYNA+I LCKLKKSSEAK LFDGML+RGMKPNSVT+CELIHGFC
Sbjct: 241 VINLMGKYGVRRGVSTYNARILSLCKLKKSSEAKALFDGMLSRGMKPNSVTYCELIHGFC 300
Query: 301 KEGNLDEAKSLFKLMNDSGFQPDSDCYFNLIFFLCRGGDFETAFKFCVESMEKGWFPSIS 360
KEGNLDEAK+LFK M +SG QPDSDCYF L++FLCRGGD++ AFK C ESMEKGW P+I+
Sbjct: 301 KEGNLDEAKNLFKRMINSGCQPDSDCYFTLVYFLCRGGDYDAAFKICGESMEKGWVPNIT 360
Query: 361 AMKSLVDGLVSISKVDEAKQLIGQIKERFSKNAEKWNEIEAGLP 405
MKSLVDGLVSISKVDEAKQLIGQIKERFSKN EKWNEIEAGLP
Sbjct: 361 TMKSLVDGLVSISKVDEAKQLIGQIKERFSKNVEKWNEIEAGLP 404
BLAST of Sed0018063 vs. ExPASy TrEMBL
Match:
A0A6J1CFY4 (pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111010861 PE=4 SV=1)
HSP 1 Score: 675.2 bits (1741), Expect = 1.6e-190
Identity = 331/405 (81.73%), Postives = 369/405 (91.11%), Query Frame = 0
Query: 1 MAFLSRLRHAFPSNSLCINHRLPYRSLSTILSPDSTNPSSAEQKSKAALSLLRSENDPDR 60
MA L+RLRHAFPSNS +N+RL YRSLS+ILSPDS NP SA+QKS+AALSLL++E++P+R
Sbjct: 1 MALLNRLRHAFPSNSTYMNYRLHYRSLSSILSPDSANPMSAKQKSRAALSLLKAEDNPER 60
Query: 61 IIDICRAATLTPESHLDRLVFSVAVSKLSASKNFDGIRQFLEEMRSRPDLKNERFACHAI 120
IIDICRAATLTPE HLDR+ FSVA+SKLS SK+FDGIR+FLEE++SRPDLKNERFACHAI
Sbjct: 61 IIDICRAATLTPELHLDRIAFSVAISKLSESKHFDGIRRFLEELKSRPDLKNERFACHAI 120
Query: 121 VLYGQANMLDHAITTFKQIGELGMRYSVKSLNALLFACHLAKDYKELKRVFMDFPKKYGI 180
VLYGQANMLDHAI FKQI ELG+R+SVKSLNALLFAC+LAKDYKELKRV+M+FPK YGI
Sbjct: 121 VLYGQANMLDHAIRAFKQIDELGVRHSVKSLNALLFACNLAKDYKELKRVYMEFPKIYGI 180
Query: 181 EVDLNAYNRVIKGFSELGSTSEVYTILAEMDRKDVKPNATTFTNWLAGCYKEEKYEDVEK 240
E DL YNRVIK FSE GS+S VY+I+AEMDRKDVKPNATTF NWLAGCYKEEKYEDVEK
Sbjct: 181 EPDLETYNRVIKAFSESGSSSAVYSIVAEMDRKDVKPNATTFANWLAGCYKEEKYEDVEK 240
Query: 241 VMKLMKKYGVRSGVSTYNAKIKGLCKLKKSSEAKVLFDGMLTRGMKPNSVTFCELIHGFC 300
V+KLM+KYGVR GV YNA+I+ LCKLKKSSEAK LFDGML+RGMKPNSVT+CELIHGFC
Sbjct: 241 VIKLMEKYGVRRGVGIYNARIQSLCKLKKSSEAKALFDGMLSRGMKPNSVTYCELIHGFC 300
Query: 301 KEGNLDEAKSLFKLMNDSGFQPDSDCYFNLIFFLCRGGDFETAFKFCVESMEKGWFPSIS 360
KEGNLDEAKSLFK M +SG QPDSDCYF ++FFLCRGGD+ETA K C ESMEKGW P+I+
Sbjct: 301 KEGNLDEAKSLFKRMINSGCQPDSDCYFTMVFFLCRGGDYETALKICGESMEKGWVPNIT 360
Query: 361 AMKSLVDGLVSISKVDEAKQLIGQIKERFSKNAEKWNEIEAGLPQ 406
MKSLVDGLVSISKV+EAKQLIGQIKERFSKN EKWNEIEA LPQ
Sbjct: 361 TMKSLVDGLVSISKVEEAKQLIGQIKERFSKNVEKWNEIEAALPQ 405
BLAST of Sed0018063 vs. ExPASy TrEMBL
Match:
A0A6J1K4T6 (pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111490066 PE=4 SV=1)
HSP 1 Score: 674.1 bits (1738), Expect = 3.7e-190
Identity = 332/405 (81.98%), Postives = 372/405 (91.85%), Query Frame = 0
Query: 1 MAFLSRLRHAFPSNSLCINHRLPYRSLSTILSPDSTNPSSAEQKSKAALSLLRSENDPDR 60
MA L RLRHAFPSN+ YRSLSTILSPDSTNP SA+QKS+AALSLL+SE++P+R
Sbjct: 1 MALLYRLRHAFPSNATY------YRSLSTILSPDSTNPLSAKQKSRAALSLLKSEDNPER 60
Query: 61 IIDICRAATLTPESHLDRLVFSVAVSKLSASKNFDGIRQFLEEMRSRPDLKNERFACHAI 120
IIDICRAATLTPESHLDR+ FSVA+SKLS SK+FDGIR+FLEE++SRPDLKNERFACHAI
Sbjct: 61 IIDICRAATLTPESHLDRIAFSVAISKLSESKHFDGIRRFLEELKSRPDLKNERFACHAI 120
Query: 121 VLYGQANMLDHAITTFKQIGELGMRYSVKSLNALLFACHLAKDYKELKRVFMDFPKKYGI 180
VLYGQANMLDHAI+TFKQI ELG+R+SVKSLNALLFAC+LAKDYKELKRVFM+FPK YGI
Sbjct: 121 VLYGQANMLDHAISTFKQIDELGVRHSVKSLNALLFACNLAKDYKELKRVFMEFPKIYGI 180
Query: 181 EVDLNAYNRVIKGFSELGSTSEVYTILAEMDRKDVKPNATTFTNWLAGCYKEEKYEDVEK 240
E DL+ YNRVIK FSE GS+S VY+ILAEMDRKD+KPNATTF NWLAGCYKEEKYEDVEK
Sbjct: 181 EPDLDTYNRVIKAFSESGSSSAVYSILAEMDRKDIKPNATTFANWLAGCYKEEKYEDVEK 240
Query: 241 VMKLMKKYGVRSGVSTYNAKIKGLCKLKKSSEAKVLFDGMLTRGMKPNSVTFCELIHGFC 300
V+KLM+KYGV+ GVSTYNA+I+ LCKLK+SSEAK LFDGML+RGMKPNSVT+CELIHGFC
Sbjct: 241 VIKLMEKYGVQRGVSTYNARIQSLCKLKRSSEAKALFDGMLSRGMKPNSVTYCELIHGFC 300
Query: 301 KEGNLDEAKSLFKLMNDSGFQPDSDCYFNLIFFLCRGGDFETAFKFCVESMEKGWFPSIS 360
KEGNLDEAK+LFK M +SG QPDSDCYF LI+FLCRGGD++TAFK C +S+EKGWFP+I+
Sbjct: 301 KEGNLDEAKTLFKRMINSGCQPDSDCYFTLIYFLCRGGDYDTAFKLCGQSIEKGWFPNIT 360
Query: 361 AMKSLVDGLVSISKVDEAKQLIGQIKERFSKNAEKWNEIEAGLPQ 406
MKSL+DGLVSISKVDEAKQLIGQIKERFSKN E WNEIEAGLPQ
Sbjct: 361 TMKSLIDGLVSISKVDEAKQLIGQIKERFSKNVETWNEIEAGLPQ 399
BLAST of Sed0018063 vs. ExPASy TrEMBL
Match:
A0A6J1F4B2 (pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111440056 PE=4 SV=1)
HSP 1 Score: 669.1 bits (1725), Expect = 1.2e-188
Identity = 330/405 (81.48%), Postives = 367/405 (90.62%), Query Frame = 0
Query: 1 MAFLSRLRHAFPSNSLCINHRLPYRSLSTILSPDSTNPSSAEQKSKAALSLLRSENDPDR 60
MA L RLR+AFPSN INHRL YR LSTILSPDSTNP SA+QKS+AALSLL+ E++P+R
Sbjct: 1 MALLYRLRNAFPSNWSYINHRLHYRCLSTILSPDSTNPLSAKQKSRAALSLLKVEDNPER 60
Query: 61 IIDICRAATLTPESHLDRLVFSVAVSKLSASKNFDGIRQFLEEMRSRPDLKNERFACHAI 120
IIDICRAATLTPESHLDR+ FSVA+SKLS SK+FDGIR FLEE++SRPDLKNERFACHAI
Sbjct: 61 IIDICRAATLTPESHLDRIAFSVAISKLSESKHFDGIRLFLEELKSRPDLKNERFACHAI 120
Query: 121 VLYGQANMLDHAITTFKQIGELGMRYSVKSLNALLFACHLAKDYKELKRVFMDFPKKYGI 180
+LYGQANMLDHAI TFKQI ELG+R+SVKSLNALLFAC++AKDYKELKRVFM+FPK YGI
Sbjct: 121 ILYGQANMLDHAIRTFKQIDELGVRHSVKSLNALLFACNVAKDYKELKRVFMEFPKIYGI 180
Query: 181 EVDLNAYNRVIKGFSELGSTSEVYTILAEMDRKDVKPNATTFTNWLAGCYKEEKYEDVEK 240
E DL+ YNRVIK FSE GS+S V++I+AEMDRK VKPNATTF NWLAGCYKEEKYEDVEK
Sbjct: 181 EPDLDTYNRVIKAFSESGSSSAVFSIVAEMDRKGVKPNATTFANWLAGCYKEEKYEDVEK 240
Query: 241 VMKLMKKYGVRSGVSTYNAKIKGLCKLKKSSEAKVLFDGMLTRGMKPNSVTFCELIHGFC 300
V+ LM KYGVR GVSTYNA+I LCKLKKSSEAK LFDGML+RGMKPNSVT+C+LIHGFC
Sbjct: 241 VINLMGKYGVRRGVSTYNARILSLCKLKKSSEAKALFDGMLSRGMKPNSVTYCKLIHGFC 300
Query: 301 KEGNLDEAKSLFKLMNDSGFQPDSDCYFNLIFFLCRGGDFETAFKFCVESMEKGWFPSIS 360
+EGNLDEAK+LFK M +SG QPDSDCYF L++FLCRGGD++ AFK C ESMEKGW P+I+
Sbjct: 301 REGNLDEAKNLFKRMINSGCQPDSDCYFTLVYFLCRGGDYDAAFKICGESMEKGWVPNIT 360
Query: 361 AMKSLVDGLVSISKVDEAKQLIGQIKERFSKNAEKWNEIEAGLPQ 406
MKSLVDGLVSISKVDEAKQLIGQIKERFSKN EKWNEIEAGLPQ
Sbjct: 361 TMKSLVDGLVSISKVDEAKQLIGQIKERFSKNVEKWNEIEAGLPQ 405
BLAST of Sed0018063 vs. TAIR 10
Match:
AT1G61870.1 (pentatricopeptide repeat 336 )
HSP 1 Score: 471.1 bits (1211), Expect = 9.1e-133
Identity = 239/411 (58.15%), Postives = 307/411 (74.70%), Query Frame = 0
Query: 1 MAFLSRLRHAFPSNSLC--INHRLPYRSL---STILSPDSTNPSSAEQKSKAALSLLRSE 60
MA LSR+R S SL +N RSL STILSPDS P ++++KSKAALSLL+SE
Sbjct: 1 MALLSRIR---SSTSLFRHLNASPQIRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSE 60
Query: 61 NDPDRIIDICRAATLTPESHLDRLVFSVAVSKLSASKNFDGIRQFLEE-MRSRPDLKNER 120
DPDRI++ICRAA+LTP+ +DR+ FS AV L+ K+F + L+ + +RPDLK+ER
Sbjct: 61 KDPDRILEICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSER 120
Query: 121 FACHAIVLYGQANMLDHAITTFKQIGELGMRYSVKSLNALLFACHLAKDYKELKRVFMDF 180
FA HAIVLY QANMLDH++ F+ + + + +VKSLNALLFAC +AKDYKE KRV+++
Sbjct: 121 FAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEM 180
Query: 181 PKKYGIEVDLNAYNRVIKGFSELGSTSEVYTILAEMDRKDVKPNATTFTNWLAGCYKEEK 240
PK YGIE DL YNR+IK F E GS S Y+I+AEM+RK +KPN+++F ++G Y E+K
Sbjct: 181 PKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDK 240
Query: 241 YEDVEKVMKLMKKYGVRSGVSTYNAKIKGLCKLKKSSEAKVLFDGMLTRGMKPNSVTFCE 300
++V KV+ +MK GV GVSTYN +I+ LCK KKS EAK L DGML+ GMKPN+VT+
Sbjct: 241 SDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSH 300
Query: 301 LIHGFCKEGNLDEAKSLFKLMNDSGFQPDSDCYFNLIFFLCRGGDFETAFKFCVESMEKG 360
LIHGFC E + +EAK LFK+M + G +PDS+CYF LI++LC+GGDFETA C ESMEK
Sbjct: 301 LIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKN 360
Query: 361 WFPSISAMKSLVDGLVSISKVDEAKQLIGQIKERFSKNAEKWNEIEAGLPQ 406
W PS S MKSLV+GL SKV+EAK+LIGQ+KE+F++N E WNE+EA LPQ
Sbjct: 361 WVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRNVELWNEVEAALPQ 408
BLAST of Sed0018063 vs. TAIR 10
Match:
AT1G11630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 422.2 bits (1084), Expect = 4.8e-118
Identity = 216/405 (53.33%), Postives = 292/405 (72.10%), Query Frame = 0
Query: 1 MAFLSRLRHAFPSNSLCINHRLPYRSLSTILSPDSTNPSSAEQKSKAALSLLRSENDPDR 60
MAFL R+R + RL S S T S ++KS+ LSLL+SEN+PDR
Sbjct: 1 MAFLFRIRTSEFILQKATQFRLKSSSSSIFTLKSLT---SKQKKSRDTLSLLKSENNPDR 60
Query: 61 IIDICRAATLTPESHLDRLVFSVAVSKLSASKNFDGIRQFLEE-MRSRPDLKNERFACHA 120
I++ICR+ +L+P+ H+DR++FSVAV L+ K+F + Q L+ ++++PD K+E FA A
Sbjct: 61 ILEICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRA 120
Query: 121 IVLYGQANMLDHAITTFKQIGELGMRYSVKSLNALLFACHLAKDYKELKRVFMDFPKKYG 180
I+LYG+ANMLD +I TF+ + + + +VKSLNALLFAC +AKDYKE RV+++ PK YG
Sbjct: 121 IILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYG 180
Query: 181 IEVDLNAYNRVIKGFSELGSTSEVYTILAEMDRKDVKPNATTFTNWLAGCYKEEKYEDVE 240
IE DL YNR+I+ E GSTS Y+I+AEM+RK +KP A +F + G YKEEK+++V
Sbjct: 181 IEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVR 240
Query: 241 KVMKLMKKYGVRSGVSTYNAKIKGLCKLKKSSEAKVLFDGMLTRGMKPNSVTFCELIHGF 300
KVM++M ++GV GV+TYN I+ LCK KKS+EAK L DG+++ M+PNSVT+ LIHGF
Sbjct: 241 KVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGF 300
Query: 301 CKEGNLDEAKSLFKLMNDSGFQPDSDCYFNLIFFLCRGGDFETAFKFCVESMEKGWFPSI 360
C E NLDEA +LF++M +G++PDS+CYF LI LC+GGDFETA C ESMEK W PS
Sbjct: 301 CSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSF 360
Query: 361 SAMKSLVDGLVSISKVDEAKQLIGQIKERFSKNAEKWNEIEAGLP 405
S MK LV+GL S SKVDEAK+LI +KE+F++N + WNE+EA LP
Sbjct: 361 SVMKWLVNGLASRSKVDEAKELIAVVKEKFTRNVDLWNEVEAALP 402
BLAST of Sed0018063 vs. TAIR 10
Match:
AT1G55890.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 192.6 bits (488), Expect = 6.2e-49
Identity = 110/359 (30.64%), Postives = 191/359 (53.20%), Query Frame = 0
Query: 24 YRSLSTILSPDSTNPSSAEQKSKAALSLLRSENDPDRIIDICRAATLTPESHLDRLVFSV 83
+ S +T++S + ++ K+ SL+ E +P RI++ + A + + V+
Sbjct: 20 FSSAATVVSEPTAVTAAISPPQKSLTSLVNGERNPKRIVEKFKKACESERFRTNIAVYDR 79
Query: 84 AVSKLSASKNFDGIRQFLEEMRSRPDLKNERFACHAIVLYGQANMLDHAITTFKQIGELG 143
V +L A+K + + LEE + D+ E FA I LYG+A M ++A F+++
Sbjct: 80 TVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRD 139
Query: 144 MRYSVKSLNALLFACHLAKDYKELKRVFMDFPKKYGIEVDLNAYNRVIKGFSELGSTSEV 203
+ SV S NALL A L+K + ++ +F + P K I+ D+ +YN +IK E S E
Sbjct: 140 CKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEA 199
Query: 204 YTILAEMDRKDVKPNATTFTNWLAGCYKEEKYEDVEKVMKLMKKYGVRSGVSTYNAKIKG 263
+L E++ K +KP+ TF L Y + ++E E++ M + V + TYNA++ G
Sbjct: 200 VALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLG 259
Query: 264 LCKLKKSSEAKVLFDGMLTRGMKPNSVTFCELIHGFCKEGNLDEAKSLFKLMNDSGFQPD 323
L KS E LF + G+KP+ +F +I G EG +DEA++ +K + G++PD
Sbjct: 260 LANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPD 319
Query: 324 SDCYFNLIFFLCRGGDFETAFKFCVESMEKGWFPSISAMKSLVDGLVSISKVDEAKQLI 383
+ L+ +C+ GDFE+A + E+ K + + ++ LVD LV SK +EA++++
Sbjct: 320 KATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIV 378
BLAST of Sed0018063 vs. TAIR 10
Match:
AT3G13160.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 191.4 bits (485), Expect = 1.4e-48
Identity = 106/334 (31.74%), Postives = 180/334 (53.89%), Query Frame = 0
Query: 49 LSLLRSENDPDRIIDICRAATLTPESHLDRLVFSVAVSKLSASKNFDGIRQFLEEMRSRP 108
++L+ E DP I + + A + V+ V +L+A+K F+ + + LEE P
Sbjct: 42 ITLVNDERDPKFITEKFKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYP 101
Query: 109 DLKNERFACHAIVLYGQANMLDHAITTFKQIGELGMRYSVKSLNALLFACHLAKDYKELK 168
++ E F I LYG+ M ++A F ++ E + + S NALL AC +K + ++
Sbjct: 102 NMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVE 161
Query: 169 RVFMDFPKKYGIEVDLNAYNRVIKGFSELGSTSEVYTILAEMDRKDVKPNATTFTNWLAG 228
+F + P K IE D+ +YN +IKG GS +E ++ E++ K +KP+ TF L
Sbjct: 162 GIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHE 221
Query: 229 CYKEEKYEDVEKVMKLMKKYGVRSGVSTYNAKIKGLCKLKKSSEAKVLFDGMLTRGMKPN 288
Y + K+E+ E++ M + V+ + +YNA++ GL KS E LFD + +KP+
Sbjct: 222 SYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPD 281
Query: 289 SVTFCELIHGFCKEGNLDEAKSLFKLMNDSGFQPDSDCYFNLIFFLCRGGDFETAFKFCV 348
TF +I GF EG LDEA + +K + +G +P + +L+ +C+ GD E+A++ C
Sbjct: 282 VFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCK 341
Query: 349 ESMEKGWFPSISAMKSLVDGLVSISKVDEAKQLI 383
E K + ++ +VD LV SK DEA++++
Sbjct: 342 EIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIV 375
BLAST of Sed0018063 vs. TAIR 10
Match:
AT1G80150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 186.4 bits (472), Expect = 4.5e-47
Identity = 104/358 (29.05%), Postives = 184/358 (51.40%), Query Frame = 0
Query: 31 LSPDSTNPSSAEQKSKAALSLLRSENDPDRIIDICRAATLTPESHLDRLVFSVAVSKLSA 90
+S +S + + AL L+SE DP+++ ++ +A +R F VS+L+
Sbjct: 24 VSTESNQIQGLKPLEEPALVKLKSERDPEKLYNLFKANATNRLVIENRFAFEDTVSRLAG 83
Query: 91 SKNFDGIRQFLEEMRSRPDLKNERFACHAIVLYGQANMLDHAITTFKQIGELGMRYSVKS 150
+ D I LE ++ P + E F I+LYG+A M A+ TF + G + SVKS
Sbjct: 84 AGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKS 143
Query: 151 LNALLFACHLAKDYKELKRVFMDFPKKYGIEVDLNAYNRVIKGFSELGSTSEVYTILAEM 210
NA L D + D P KYGI++D ++N IK F ELG Y + EM
Sbjct: 144 FNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREM 203
Query: 211 DRKDVKPNATTFTNWLAGCYKEEKYEDVEKVMKLMKKYGVRSGVSTYNAKIKGLCKLKKS 270
++ + P+ T+T ++ YK E+ + LM G + ++T+N +I+ L +++
Sbjct: 204 EKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRA 263
Query: 271 SEAKVLFDGMLTRGMKPNSVTFCELIHGFCKEGNLDEAKSLFKLMNDSGFQPDSDCYFNL 330
+A L M ++P+S+T+ +I GF D A+ ++ M+ G++P+ Y +
Sbjct: 264 WDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTM 323
Query: 331 IFFLCRGGDFETAFKFCVESMEKGWFPSISAMKSLVDGLVSISKVDEAKQLIGQIKER 389
I +LC+ G+F+ A+ C + M K W+P++ ++ L+ GLV ++D+AK ++ + R
Sbjct: 324 IHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRR 381
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023542690.1 | 2.1e-195 | 84.20 | pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like [Cucur... | [more] |
XP_022954817.1 | 1.5e-193 | 83.21 | pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like [Cucur... | [more] |
KAG6573197.1 | 4.3e-193 | 82.72 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_023001276.1 | 1.5e-190 | 82.43 | pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like [Cucur... | [more] |
XP_022140127.1 | 3.4e-190 | 81.73 | pentatricopeptide repeat-containing protein At1g61870, mitochondrial [Momordica ... | [more] |
Match Name | E-value | Identity | Description | |
Q8LE47 | 1.3e-131 | 58.15 | Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidop... | [more] |
Q9SAB4 | 6.8e-117 | 53.33 | Pentatricopeptide repeat-containing protein At1g11630, mitochondrial OS=Arabidop... | [more] |
Q9LG23 | 8.8e-48 | 30.64 | Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidop... | [more] |
Q9LK57 | 2.0e-47 | 31.74 | Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidop... | [more] |
Q8GW57 | 6.3e-46 | 29.05 | Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GRY2 | 7.1e-194 | 83.21 | pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like OS=Cuc... | [more] |
A0A6J1KI60 | 7.4e-191 | 82.43 | pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like OS=Cuc... | [more] |
A0A6J1CFY4 | 1.6e-190 | 81.73 | pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Momordic... | [more] |
A0A6J1K4T6 | 3.7e-190 | 81.98 | pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like OS=Cuc... | [more] |
A0A6J1F4B2 | 1.2e-188 | 81.48 | pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Cucurbit... | [more] |
Match Name | E-value | Identity | Description | |
AT1G61870.1 | 9.1e-133 | 58.15 | pentatricopeptide repeat 336 | [more] |
AT1G11630.1 | 4.8e-118 | 53.33 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G55890.1 | 6.2e-49 | 30.64 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G13160.1 | 1.4e-48 | 31.74 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G80150.1 | 4.5e-47 | 29.05 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |