Sed0018058 (gene) Chayote v1

Overview


Name	Sed0018058
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Actin-depolymerizing factor
Location	LG01: 1654025 .. 1655759 (+)
RNA-Seq Expression	Sed0018058
Synteny	Sed0018058

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACCGTAGTCAATTCCAGAAGTTCAGTCAAGTTCCCGACGAAACCTCACAACTCAACAATGGCGATGGCTTTCAAGATGGTAAGAATTCACAATCTCTCTCGATTTTTCTTGTCATTTTTTCTTGATTCTGTAATCCTGATTCGATTTGTTAATGGCGAATCTCAGGCAACCACAGGAATGTGGGTGAGCGATGAGTGCAAGAATTCGTTCATGGAGATGAAATGGAAGAAGGTGCACAGGTATATCGTGTTCAAGATCGATGAAGGATCGCGGTTGGTTACGGTGGACAAGGTCGGCGGTCCGGCGGAAAGCTACGACGATCTCACCGCCTCCTTGCCGACCGACGATTGTCGATATGCGGTGTTCGATTTCGACTTCGTCACCGTTGACAAGTGCCAGAAGAGCAAGATCTTCTTCATCGCTTGGTACGTTTCTCGATTCTAGGTTTTGCATCGATCGCATCTGTTCTTCATTCATCGAATTCTGTTTGAATCTTGCGAGATACGCTGCTGTTTGTTTGGGCGGGAATTTCGATTAATTCGTCTCGAATTTTCTTCGAATTCGTAATCTCTGATTCGGTTGTAGAGTCTATGACGAATTTCATGTTTATAGCAGCGTAATCGCATATCTGAAATCGAAATTCTCTGGAAAAACTAACCGATAATTATATATGATTGTTTGTTTTCTGTAATTCGACTCAAATTTTCCTCAAATTCATGATCTCTAATTCGATTGGAGTCTAACTAATCACATGTTCATAGCAGCATAATCGCACATCTGATCGTTATCTGAAATCGAAAAACTAATCGATAATTACATGATTTTTTTTGTTTTTTCAATCAATCAATCTCTAGTTCTATTACAGAGCCTAAATAATTACATGTTGATAGCAGCATAATCGCACATCTGATCGTTATTGGAATCAAAATTCTCTGGAAAAACTAACCTATAATTTATATGATTGTTTGTTTTTTCAACCGATCTCTATTTCTGGTTCCGAGCCTAACTAATTACATGTTCAAAGCTGCATAATCGCACATCTGATCATTATCTGAAATCGAAATTCTCTGGAAAAACTAACTGGTAATTGAATGATTGTTTGTTTGTTTTTTCAATCACTGTCTGTAATGCTATGGATTTGGATCTGAATCTGAATCTAAATCTGAAACTGATCGGTTTTGTTAATCAATTTGTTGCAGGTCACCGACGGCATCAAGAATTAGAGCAAAAATTCTATACGCAACTTCAAAAGATGGGCTGAGGAGAGTGCTGGAAGGTATTCATTACGATGTTCAAGCAACAGATCCAACGGAGATGGGGATCGATGTGATCAAGGACAGAGCCAAATAATCAACAACAAAAAATTGGCTAATTAATCATCAACCTTTCTTTAGGTATCTTTTACTTTGTTTTTAATAATATGTTATCTGCTTGGTTTGTTCAACTTTTTATTTTATTTTCTTCCTTTTTTTTTTGGCACTAATGTAAGTATAAGAAGAAGAAAAAAAAAGAACTTCTAATGTTGAGAGGATAATGAAAGCCCCTTTTTTTCTTGATTTTGCTTTAATCTTGAAAAGGTGAGCTGATAATTTATGTAGGGTGTAATTTGATCTTAAAGTTGTAATTTACTTGTGTCATCTTTTTTTCCCTTTTGCACTTCCTCCCCCCACTTGCTACCCTACAACATATTTGATTTGTACCATTTCTTCATTGATACACTTTTGTGCAATTATT

mRNA sequence

CACCGTAGTCAATTCCAGAAGTTCAGTCAAGTTCCCGACGAAACCTCACAACTCAACAATGGCGATGGCTTTCAAGATGGCAACCACAGGAATGTGGGTGAGCGATGAGTGCAAGAATTCGTTCATGGAGATGAAATGGAAGAAGGTGCACAGGTATATCGTGTTCAAGATCGATGAAGGATCGCGGTTGGTTACGGTGGACAAGGTCGGCGGTCCGGCGGAAAGCTACGACGATCTCACCGCCTCCTTGCCGACCGACGATTGTCGATATGCGGTGTTCGATTTCGACTTCGTCACCGTTGACAAGTGCCAGAAGAGCAAGATCTTCTTCATCGCTTGGTCACCGACGGCATCAAGAATTAGAGCAAAAATTCTATACGCAACTTCAAAAGATGGGCTGAGGAGAGTGCTGGAAGGTATTCATTACGATGTTCAAGCAACAGATCCAACGGAGATGGGGATCGATGTGATCAAGGACAGAGCCAAATAATCAACAACAAAAAATTGGCTAATTAATCATCAACCTTTCTTTAGGTATCTTTTACTTTGTTTTTAATAATATGTTATCTGCTTGGTTTGTTCAACTTTTTATTTTATTTTCTTCCTTTTTTTTTTGGCACTAATGTAAGTATAAGAAGAAGAAAAAAAAAGAACTTCTAATGTTGAGAGGATAATGAAAGCCCCTTTTTTTCTTGATTTTGCTTTAATCTTGAAAAGGTGAGCTGATAATTTATGTAGGGTGTAATTTGATCTTAAAGTTGTAATTTACTTGTGTCATCTTTTTTTCCCTTTTGCACTTCCTCCCCCCACTTGCTACCCTACAACATATTTGATTTGTACCATTTCTTCATTGATACACTTTTGTGCAATTATT

Coding sequence (CDS)

ATGGCGATGGCTTTCAAGATGGCAACCACAGGAATGTGGGTGAGCGATGAGTGCAAGAATTCGTTCATGGAGATGAAATGGAAGAAGGTGCACAGGTATATCGTGTTCAAGATCGATGAAGGATCGCGGTTGGTTACGGTGGACAAGGTCGGCGGTCCGGCGGAAAGCTACGACGATCTCACCGCCTCCTTGCCGACCGACGATTGTCGATATGCGGTGTTCGATTTCGACTTCGTCACCGTTGACAAGTGCCAGAAGAGCAAGATCTTCTTCATCGCTTGGTCACCGACGGCATCAAGAATTAGAGCAAAAATTCTATACGCAACTTCAAAAGATGGGCTGAGGAGAGTGCTGGAAGGTATTCATTACGATGTTCAAGCAACAGATCCAACGGAGATGGGGATCGATGTGATCAAGGACAGAGCCAAATAA

Protein sequence

MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPTDDCRYAVFDFDFVTVDKCQKSKIFFIAWSPTASRIRAKILYATSKDGLRRVLEGIHYDVQATDPTEMGIDVIKDRAK

Homology

[Close]

BLAST of Sed0018058 vs. NCBI nr
Match: XP_004147035.1 (actin-depolymerizing factor 5 [Cucumis sativus] >XP_008457680.1 PREDICTED: actin-depolymerizing factor 5-like [Cucumis melo] >KGN61924.1 hypothetical protein Csa_005919 [Cucumis sativus])

HSP 1 Score: 285.4 bits (729), Expect = 2.7e-73
Identity = 138/143 (96.50%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60

Query: 61  TASLPTDDCRYAVFDFDFVTVDKCQKSKIFFIAWSPTASRIRAKILYATSKDGLRRVLEG 120
           TASLP DDCRYAVFDFDFVTVD C+KSKIFFIAWSPT SRIRAKILYATSKDGLRRVLEG
Sbjct: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG 120

Query: 121 IHYDVQATDPTEMGIDVIKDRAK 144
           IHY+VQATDPTEMGIDVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGIDVIKDRAK 143

[Close]

BLAST of Sed0018058 vs. NCBI nr
Match: XP_038901914.1 (actin-depolymerizing factor 5-like [Benincasa hispida])

HSP 1 Score: 284.3 bits (726), Expect = 6.0e-73
Identity = 137/143 (95.80%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60

Query: 61  TASLPTDDCRYAVFDFDFVTVDKCQKSKIFFIAWSPTASRIRAKILYATSKDGLRRVLEG 120
           TASLP DDCRYAVFDFDFVTVD C+KSKIFFIAWSPT SRIRAKILYATSKDGLRRVLEG
Sbjct: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG 120

Query: 121 IHYDVQATDPTEMGIDVIKDRAK 144
           IHY+VQATDPTEMG+DVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGMDVIKDRAK 143

[Close]

BLAST of Sed0018058 vs. NCBI nr
Match: KAG6571025.1 (Actin-depolymerizing factor 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 283.1 bits (723), Expect = 1.3e-72
Identity = 137/143 (95.80%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL
Sbjct: 624 MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 683

Query: 61  TASLPTDDCRYAVFDFDFVTVDKCQKSKIFFIAWSPTASRIRAKILYATSKDGLRRVLEG 120
           TASLP DDCRYAVFDFDFVTVD C+KSKIFFIAWSPTASRIRAKILYATSK GLRRVLEG
Sbjct: 684 TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 743

Query: 121 IHYDVQATDPTEMGIDVIKDRAK 144
           IHY+VQATDPTEMG+DVIKDRAK
Sbjct: 744 IHYEVQATDPTEMGMDVIKDRAK 766

[Close]

BLAST of Sed0018058 vs. NCBI nr
Match: XP_022943996.1 (actin-depolymerizing factor 5-like [Cucurbita moschata] >XP_022986745.1 actin-depolymerizing factor 5-like [Cucurbita maxima] >KAG7010856.1 Actin-depolymerizing factor 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 283.1 bits (723), Expect = 1.3e-72
Identity = 137/143 (95.80%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60

Query: 61  TASLPTDDCRYAVFDFDFVTVDKCQKSKIFFIAWSPTASRIRAKILYATSKDGLRRVLEG 120
           TASLP DDCRYAVFDFDFVTVD C+KSKIFFIAWSPTASRIRAKILYATSK GLRRVLEG
Sbjct: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120

Query: 121 IHYDVQATDPTEMGIDVIKDRAK 144
           IHY+VQATDPTEMG+DVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGMDVIKDRAK 143

[Close]

BLAST of Sed0018058 vs. NCBI nr
Match: XP_022947625.1 (actin-depolymerizing factor 5-like [Cucurbita moschata] >XP_022971127.1 actin-depolymerizing factor 5-like [Cucurbita maxima] >XP_023532678.1 actin-depolymerizing factor 5-like [Cucurbita pepo subsp. pepo] >KAG6604928.1 Actin-depolymerizing factor 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 282.7 bits (722), Expect = 1.7e-72
Identity = 137/143 (95.80%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGG AESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL 60

Query: 61  TASLPTDDCRYAVFDFDFVTVDKCQKSKIFFIAWSPTASRIRAKILYATSKDGLRRVLEG 120
           TASLPTDDCRYAVFDFDFVT+D C+KSKIFFIAWSPTASRIRAKILYATSK GLRRVLEG
Sbjct: 61  TASLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120

Query: 121 IHYDVQATDPTEMGIDVIKDRAK 144
           IHY+VQATDPTEMGIDVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGIDVIKDRAK 143

[Close]

BLAST of Sed0018058 vs. ExPASy Swiss-Prot
Match: Q9ZNT3 (Actin-depolymerizing factor 5 OS=Arabidopsis thaliana OX=3702 GN=ADF5 PE=1 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 4.8e-65
Identity = 120/143 (83.92%), Postives = 130/143 (90.91%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMAFKMATTGM V+DEC +SFM+MKWKKVHRYIVFKI+E SR VTVDKVGG  ESY DL
Sbjct: 1   MAMAFKMATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDL 60

Query: 61  TASLPTDDCRYAVFDFDFVTVDKCQKSKIFFIAWSPTASRIRAKILYATSKDGLRRVLEG 120
             SLP DDCRYAVFDFDFVTVD C+KSKIFFIAWSP AS+IRAKILYATSKDGLRRVLEG
Sbjct: 61  EDSLPVDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEG 120

Query: 121 IHYDVQATDPTEMGIDVIKDRAK 144
           IHY++QATDPTEMG D+I+DRAK
Sbjct: 121 IHYELQATDPTEMGFDIIQDRAK 143

[Close]

BLAST of Sed0018058 vs. ExPASy Swiss-Prot
Match: Q10P87 (Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF5 PE=2 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.9e-61
Identity = 112/143 (78.32%), Postives = 127/143 (88.81%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMA+KMAT GM V +EC+  FMEMKWKKVHR++V+KIDE SR V VDKVGGP E Y++L
Sbjct: 1   MAMAYKMATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEEL 60

Query: 61  TASLPTDDCRYAVFDFDFVTVDKCQKSKIFFIAWSPTASRIRAKILYATSKDGLRRVLEG 120
            A+LPTDDCRYAVFDFDFVTVD CQKSKIFFIAWSPTASRIRAKILYATSK GLRRVL+G
Sbjct: 61  VAALPTDDCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDG 120

Query: 121 IHYDVQATDPTEMGIDVIKDRAK 144
           +HY+VQATD +EMG DVI+ RA+
Sbjct: 121 VHYEVQATDSSEMGYDVIRGRAQ 143

[Close]

BLAST of Sed0018058 vs. ExPASy Swiss-Prot
Match: O49606 (Actin-depolymerizing factor 9 OS=Arabidopsis thaliana OX=3702 GN=ADF9 PE=2 SV=2)

HSP 1 Score: 231.9 bits (590), Expect = 4.6e-60
Identity = 106/141 (75.18%), Postives = 123/141 (87.23%), Query Frame = 0


Query: 3   MAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTA 62
           MA K AT+GMW++D+CK SFMEMKWKKVHRY+V+K++E SR VTVDKVG   ESYDDL A
Sbjct: 1   MALKTATSGMWMTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAA 60

Query: 63  SLPTDDCRYAVFDFDFVTVDKCQKSKIFFIAWSPTASRIRAKILYATSKDGLRRVLEGIH 122
           SLP DDCRYAVFDFD+VTVD C+ SKIFFI WSP ASRIR K++YATSK GLRRVL+G+H
Sbjct: 61  SLPEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVH 120

Query: 123 YDVQATDPTEMGIDVIKDRAK 144
           Y++QATDPTEMG D I+DRAK
Sbjct: 121 YELQATDPTEMGFDKIQDRAK 141

[Close]

BLAST of Sed0018058 vs. ExPASy Swiss-Prot
Match: Q8SAG3 (Actin-depolymerizing factor OS=Vitis vinifera OX=29760 PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 9.6e-50
Identity = 88/135 (65.19%), Postives = 116/135 (85.93%), Query Frame = 0


Query: 8   ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPTD 67
           A++GM V+D  KN+F+E+K KKVHRY++FKIDE  + V V+K GGPAES+D+  A+LP +
Sbjct: 8   ASSGMGVADHSKNTFLELKRKKVHRYVIFKIDEKKKEVVVEKTGGPAESFDEFAAALPEN 67

Query: 68  DCRYAVFDFDFVTVDKCQKSKIFFIAWSPTASRIRAKILYATSKDGLRRVLEGIHYDVQA 127
           DCRYAV+DFDFVT + CQKSKIFFIAWSP +SRIRAK+LYATSK+  RR L+G+HY++QA
Sbjct: 68  DCRYAVYDFDFVTSENCQKSKIFFIAWSPDSSRIRAKMLYATSKERFRRELDGVHYEIQA 127

Query: 128 TDPTEMGIDVIKDRA 143
           TDPTEM ++V+++RA
Sbjct: 128 TDPTEMDLEVLRERA 142

[Close]

BLAST of Sed0018058 vs. ExPASy Swiss-Prot
Match: Q9ZSK2 (Actin-depolymerizing factor 6 OS=Arabidopsis thaliana OX=3702 GN=ADF6 PE=1 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.0e-47
Identity = 86/135 (63.70%), Postives = 110/135 (81.48%), Query Frame = 0


Query: 8   ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPTD 67
           A +GM V+DE K +F+E++ KK HRY+VFKIDE  + V V+K G P ESYDD  ASLP +
Sbjct: 11  AISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDN 70

Query: 68  DCRYAVFDFDFVTVDKCQKSKIFFIAWSPTASRIRAKILYATSKDGLRRVLEGIHYDVQA 127
           DCRYAV+DFDFVT + CQKSKIFF AWSP+ S IRAK+LY+TSKD L R L+GIHY++QA
Sbjct: 71  DCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQA 130

Query: 128 TDPTEMGIDVIKDRA 143
           TDPTE+ ++V+++RA
Sbjct: 131 TDPTEVDLEVLRERA 145

[Close]

BLAST of Sed0018058 vs. ExPASy TrEMBL
Match: A0A0A0LLM1 (ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G270170 PE=3 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.3e-73
Identity = 138/143 (96.50%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60

Query: 61  TASLPTDDCRYAVFDFDFVTVDKCQKSKIFFIAWSPTASRIRAKILYATSKDGLRRVLEG 120
           TASLP DDCRYAVFDFDFVTVD C+KSKIFFIAWSPT SRIRAKILYATSKDGLRRVLEG
Sbjct: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG 120

Query: 121 IHYDVQATDPTEMGIDVIKDRAK 144
           IHY+VQATDPTEMGIDVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGIDVIKDRAK 143

[Close]

BLAST of Sed0018058 vs. ExPASy TrEMBL
Match: A0A1S3C6R0 (actin-depolymerizing factor 5-like OS=Cucumis melo OX=3656 GN=LOC103497322 PE=3 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.3e-73
Identity = 138/143 (96.50%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60

Query: 61  TASLPTDDCRYAVFDFDFVTVDKCQKSKIFFIAWSPTASRIRAKILYATSKDGLRRVLEG 120
           TASLP DDCRYAVFDFDFVTVD C+KSKIFFIAWSPT SRIRAKILYATSKDGLRRVLEG
Sbjct: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG 120

Query: 121 IHYDVQATDPTEMGIDVIKDRAK 144
           IHY+VQATDPTEMGIDVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGIDVIKDRAK 143

[Close]

BLAST of Sed0018058 vs. ExPASy TrEMBL
Match: A0A6J1JEW6 (actin-depolymerizing factor 5-like OS=Cucurbita maxima OX=3661 GN=LOC111484412 PE=3 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 6.4e-73
Identity = 137/143 (95.80%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60

Query: 61  TASLPTDDCRYAVFDFDFVTVDKCQKSKIFFIAWSPTASRIRAKILYATSKDGLRRVLEG 120
           TASLP DDCRYAVFDFDFVTVD C+KSKIFFIAWSPTASRIRAKILYATSK GLRRVLEG
Sbjct: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120

Query: 121 IHYDVQATDPTEMGIDVIKDRAK 144
           IHY+VQATDPTEMG+DVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGMDVIKDRAK 143

[Close]

BLAST of Sed0018058 vs. ExPASy TrEMBL
Match: A0A6J1FT84 (actin-depolymerizing factor 5-like OS=Cucurbita moschata OX=3662 GN=LOC111448560 PE=3 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 6.4e-73
Identity = 137/143 (95.80%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60

Query: 61  TASLPTDDCRYAVFDFDFVTVDKCQKSKIFFIAWSPTASRIRAKILYATSKDGLRRVLEG 120
           TASLP DDCRYAVFDFDFVTVD C+KSKIFFIAWSPTASRIRAKILYATSK GLRRVLEG
Sbjct: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120

Query: 121 IHYDVQATDPTEMGIDVIKDRAK 144
           IHY+VQATDPTEMG+DVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGMDVIKDRAK 143

[Close]

BLAST of Sed0018058 vs. ExPASy TrEMBL
Match: A0A6J1I143 (actin-depolymerizing factor 5-like OS=Cucurbita maxima OX=3661 GN=LOC111469893 PE=3 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 8.4e-73
Identity = 137/143 (95.80%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGG AESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL 60

Query: 61  TASLPTDDCRYAVFDFDFVTVDKCQKSKIFFIAWSPTASRIRAKILYATSKDGLRRVLEG 120
           TASLPTDDCRYAVFDFDFVT+D C+KSKIFFIAWSPTASRIRAKILYATSK GLRRVLEG
Sbjct: 61  TASLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120

Query: 121 IHYDVQATDPTEMGIDVIKDRAK 144
           IHY+VQATDPTEMGIDVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGIDVIKDRAK 143

[Close]

BLAST of Sed0018058 vs. TAIR 10
Match: AT2G16700.1 (actin depolymerizing factor 5 )

HSP 1 Score: 248.4 bits (633), Expect = 3.4e-66
Identity = 120/143 (83.92%), Postives = 130/143 (90.91%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMAFKMATTGM V+DEC +SFM+MKWKKVHRYIVFKI+E SR VTVDKVGG  ESY DL
Sbjct: 1   MAMAFKMATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDL 60

Query: 61  TASLPTDDCRYAVFDFDFVTVDKCQKSKIFFIAWSPTASRIRAKILYATSKDGLRRVLEG 120
             SLP DDCRYAVFDFDFVTVD C+KSKIFFIAWSP AS+IRAKILYATSKDGLRRVLEG
Sbjct: 61  EDSLPVDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEG 120

Query: 121 IHYDVQATDPTEMGIDVIKDRAK 144
           IHY++QATDPTEMG D+I+DRAK
Sbjct: 121 IHYELQATDPTEMGFDIIQDRAK 143

[Close]

BLAST of Sed0018058 vs. TAIR 10
Match: AT4G34970.1 (actin depolymerizing factor 9 )

HSP 1 Score: 231.9 bits (590), Expect = 3.3e-61
Identity = 106/141 (75.18%), Postives = 123/141 (87.23%), Query Frame = 0


Query: 3   MAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTA 62
           MA K AT+GMW++D+CK SFMEMKWKKVHRY+V+K++E SR VTVDKVG   ESYDDL A
Sbjct: 1   MALKTATSGMWMTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAA 60

Query: 63  SLPTDDCRYAVFDFDFVTVDKCQKSKIFFIAWSPTASRIRAKILYATSKDGLRRVLEGIH 122
           SLP DDCRYAVFDFD+VTVD C+ SKIFFI WSP ASRIR K++YATSK GLRRVL+G+H
Sbjct: 61  SLPEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVH 120

Query: 123 YDVQATDPTEMGIDVIKDRAK 144
           Y++QATDPTEMG D I+DRAK
Sbjct: 121 YELQATDPTEMGFDKIQDRAK 141

[Close]

BLAST of Sed0018058 vs. TAIR 10
Match: AT2G16700.2 (actin depolymerizing factor 5 )

HSP 1 Score: 228.0 bits (580), Expect = 4.7e-60
Identity = 109/132 (82.58%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 12  MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPTDDCRY 71
           M V+DEC +SFM+MKWKKVHRYIVFKI+E SR VTVDKVGG  ESY DL  SLP DDCRY
Sbjct: 1   MRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVDDCRY 60

Query: 72  AVFDFDFVTVDKCQKSKIFFIAWSPTASRIRAKILYATSKDGLRRVLEGIHYDVQATDPT 131
           AVFDFDFVTVD C+KSKIFFIAWSP AS+IRAKILYATSKDGLRRVLEGIHY++QATDPT
Sbjct: 61  AVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEGIHYELQATDPT 120

Query: 132 EMGIDVIKDRAK 144
           EMG D+I+DRAK
Sbjct: 121 EMGFDIIQDRAK 132

[Close]

BLAST of Sed0018058 vs. TAIR 10
Match: AT2G31200.1 (actin depolymerizing factor 6 )

HSP 1 Score: 189.9 bits (481), Expect = 1.4e-48
Identity = 86/135 (63.70%), Postives = 110/135 (81.48%), Query Frame = 0


Query: 8   ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPTD 67
           A +GM V+DE K +F+E++ KK HRY+VFKIDE  + V V+K G P ESYDD  ASLP +
Sbjct: 11  AISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDN 70

Query: 68  DCRYAVFDFDFVTVDKCQKSKIFFIAWSPTASRIRAKILYATSKDGLRRVLEGIHYDVQA 127
           DCRYAV+DFDFVT + CQKSKIFF AWSP+ S IRAK+LY+TSKD L R L+GIHY++QA
Sbjct: 71  DCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQA 130

Query: 128 TDPTEMGIDVIKDRA 143
           TDPTE+ ++V+++RA
Sbjct: 131 TDPTEVDLEVLRERA 145

[Close]

BLAST of Sed0018058 vs. TAIR 10
Match: AT4G00680.1 (actin depolymerizing factor 8 )

HSP 1 Score: 181.4 bits (459), Expect = 5.1e-46
Identity = 80/134 (59.70%), Postives = 109/134 (81.34%), Query Frame = 0


Query: 8   ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPTD 67
           + +GM V+DECK  F+E+K K+ +R+IVFKIDE ++ V ++K+G P E+YDD T+S+P D
Sbjct: 4   SASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDD 63

Query: 68  DCRYAVFDFDFVTVDKCQKSKIFFIAWSPTASRIRAKILYATSKDGLRRVLEGIHYDVQA 127
           +CRYAV+DFDF T D CQKSKIFFIAWSP  SR+R+K+LYA+SKD  +R +EGI  ++QA
Sbjct: 64  ECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQA 123

Query: 128 TDPTEMGIDVIKDR 142
           TDP+EM +D+IK R
Sbjct: 124 TDPSEMSLDIIKGR 137

The following BLAST results are available for this feature:

BLAST of Sed0018058 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147035.1	2.7e-73	96.50	actin-depolymerizing factor 5 [Cucumis sativus] >XP_008457680.1 PREDICTED: actin...	[more]
XP_038901914.1	6.0e-73	95.80	actin-depolymerizing factor 5-like [Benincasa hispida]	[more]
KAG6571025.1	1.3e-72	95.80	Actin-depolymerizing factor 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022943996.1	1.3e-72	95.80	actin-depolymerizing factor 5-like [Cucurbita moschata] >XP_022986745.1 actin-de...	[more]
XP_022947625.1	1.7e-72	95.80	actin-depolymerizing factor 5-like [Cucurbita moschata] >XP_022971127.1 actin-de...	[more]

BLAST of Sed0018058 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZNT3	4.8e-65	83.92	Actin-depolymerizing factor 5 OS=Arabidopsis thaliana OX=3702 GN=ADF5 PE=1 SV=1	[more]
Q10P87	1.9e-61	78.32	Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF5 P...	[more]
O49606	4.6e-60	75.18	Actin-depolymerizing factor 9 OS=Arabidopsis thaliana OX=3702 GN=ADF9 PE=2 SV=2	[more]
Q8SAG3	9.6e-50	65.19	Actin-depolymerizing factor OS=Vitis vinifera OX=29760 PE=2 SV=1	[more]
Q9ZSK2	2.0e-47	63.70	Actin-depolymerizing factor 6 OS=Arabidopsis thaliana OX=3702 GN=ADF6 PE=1 SV=1	[more]

BLAST of Sed0018058 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLM1	1.3e-73	96.50	ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G270170 PE=3 ...	[more]
A0A1S3C6R0	1.3e-73	96.50	actin-depolymerizing factor 5-like OS=Cucumis melo OX=3656 GN=LOC103497322 PE=3 ...	[more]
A0A6J1JEW6	6.4e-73	95.80	actin-depolymerizing factor 5-like OS=Cucurbita maxima OX=3661 GN=LOC111484412 P...	[more]
A0A6J1FT84	6.4e-73	95.80	actin-depolymerizing factor 5-like OS=Cucurbita moschata OX=3662 GN=LOC111448560...	[more]
A0A6J1I143	8.4e-73	95.80	actin-depolymerizing factor 5-like OS=Cucurbita maxima OX=3661 GN=LOC111469893 P...	[more]

BLAST of Sed0018058 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16700.1	3.4e-66	83.92	actin depolymerizing factor 5	[more]
AT4G34970.1	3.3e-61	75.18	actin depolymerizing factor 9	[more]
AT2G16700.2	4.7e-60	82.58	actin depolymerizing factor 5	[more]
AT2G31200.1	1.4e-48	63.70	actin depolymerizing factor 6	[more]
AT4G00680.1	5.1e-46	59.70	actin depolymerizing factor 8	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 16..143 e-value: 1.1E-47 score: 174.4
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 18..140 e-value: 3.6E-32 score: 110.8
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 11..143 score: 35.054008
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 8..143 e-value: 2.8E-44 score: 152.2
None	No IPR available	PANTHER	PTHR11913:SF98	ACTIN DEPOLYMERIZING FACTOR 5-RELATED	coord: 5..143
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 6..141
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 5..143
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 10..142 e-value: 4.66809E-58 score: 174.667

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018058.1	Sed0018058.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0003779	actin binding