Sed0018043 (gene) Chayote v1

Overview


Name	Sed0018043
Type	gene
Organism	Sechium edule (Chayote v1)
Description	39S ribosomal protein L46, mitochondrial-like isoform X2
Location	LG14: 1460073 .. 1464980 (+)
RNA-Seq Expression	Sed0018043
Synteny	Sed0018043

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACAACACACAAAAACTAGAAGAGATTTACGAAGCGCAACCCTCGCCGTCGACGGCGACTCTCTCTTCTCAGGTGAACACTTCGCCCTTTTTTTCCTTTTCATTTCAATGGATATCTCATCAATGGCTGTTCAAGATCGTTTCGCCCTGTTCGTAGAGCTTCAACGCAAGTTCTAGCATCATCTCTCTCAAAATTTCTTGCGTAGTTTGTGAATGATTTCTTCTTCTTCTTTTTTTTTTTTTGTCTAATCGATTTCTGGATTCTCTGAAGTTCAGGATGCAGAGATCGTTCAGTTTAGCCGCTCAGCTGGTGAAGAGGCGAGGATTTTCGACGAATTCCGACAAGATTGTGGCGTCTGTACTGTTCGAGAGGCTGCCAGTCGTGATCCCGAAGATTGATCCTGCTATCTATGCATTTCAGGAGTTTCAGTAAGTTTGTTTTTTCTTGTGTGTATCTGTTTAATTTCTGAGAGTGAAAAATGTTGAAATGGTAAAAATGAAACGAAGGAAATTGGTGGTATGTCTTGACTTGATATCAATCAGTACGGGGATTATTATGGCTCAATTTGATAATCATTTAGTTTTTGAAACTTATGCTTGTATTTACTCAGTTTCATCTTTTCTTAAAGAAGTAGGGGAATTCTAATCAAATTCCATAAACCAAAACAAGTTTTCAGAAGCTATTTTTTTTTTTACCTTTCAAATTTTGGTCTGATTTTTAAAAACACAAGCCAAATGTAGATATTGAAGAAATGAAAACTATGTGTTCGGGTAGTAGTCGTAGGCTTAGATTTCAAAAACAAAAAATTATCGAATCGGGCCTAAAACTGGAATTCAAACGATGTGATTATTGTGATAGAGCTATGAACTCGCACTAAAATCAAGTAACATTGTTATGGCATACTCTCCGCAGAAACATTTGCTTATCATACTTCTGCTATTGTGATCAGGTTTAGGTGGCAACAGCAATATCGACGTAAATATCCCGATGAATTTTTAGATAAAGCTAATGCTAGGTAAATGATCTATCATTTTATTAGCCTGTGTTCAATTCGTAATTTTGGTTTATGTTTTTAATCTATCCTTTTCAACTCTTCTAATTCTTGTGCTACACTGCTACTTTAAAGCACCAAGTTCTGGAAAGTGCTCTTTTAATCTATTTTTCATTATTTTTGTTTTTTTTATATCAATGAGTATCTGCACATACCTCGACTTGACACTACACCATTTAGTTATCAAAAGAAACCCGTATAAAATTAATTCCTAGGTGGGTGACCGTCATAGATTTAATCCATAAGCTTTTGGTTCCATAAACCCCTTTTGACCACTAGGTTAAGCAATGATAGTTATAATTTATTTTTCATCTAATATCATTATCAACACGAATTGCACCAGGAGTAGTCATAGATTAGTTATCATATTTTAGTTAATTTATTCTCAATAACGCAAGCCATTTTTGTAGTGGCTACTAGGCTGCCAATGAACAACAACGTTTGAGGTTTCTTTCCATTGTAGTGAGGTTTAACCGATTCTAATGCTCTATATCTCTGAATTGCCCTTGATGTATCCATGTAAATGCTGCAAAAGGATTAAGTACGGTTACTGATTAAATGTGATTTGAATAAATGAAGTAATATCTCTAAGGTATTTTGAAACTTACCTCTATTGGTAGCTAAAATTAATTGAAGAATTTTTACACTAATAGATAGGGTTAAAGTTTATGACTTCCGTGGGGACTGCTAAGTTGAAGCATTTTGGTGATGTATCTTAGTGTATTCTTTATTAAAGAGCCTAAATACTGTATATTCTTGGTAGTCAGTTAATTTTTTCTTTGGATTATCTGTGAGCCAACTTGGTATTTTTTTTTTCCTGAATATGTCAGTACGTTACCATCGCTCGTGCAATTTCAGCTGCCCATAAAATAATTCATATGTTGCTACAAGCCTACAGCATAATTTTGACTCTTGGTGTCAATGTGTCATCATTACTTTTTTTTTGGCAAGACTTTGTGTCACCTATATTTAGTTAGCTAATTTTATGGAACTTATTGTGCAAACACTAGCTATATGCAAAAACATGACTTTTTTTTTCTTTTTCTTTTTCTTTTGGGCTGTTGTATAACACAAACTGCTGATAACAGGGGAAAAGGTGACTACCAAATTGATTATGTTCCAGCTCCACGGATTACGGAAGCTGACAAAACAAATGATAGGAAGTATGCCGGCTTTATTTATTTATTTAGAATTGATAGATTGAAGGTTTTTTCTTATCATTACCATTGAGGAAAAATGATAATGCAGTCTGTGAGTTATTGTTCTTGTTCATGCTTTATAATTTTCATGGTTGTGAGGAGAGCCTAGTGGAACAACACGGATTACTGAAGCTGACAAAACAAGTGATAGGAAGTATGCAGTCTTTTTTATGTATTTAAAATTGATTGATCGAAGCTTTCCTTATCAATGCTACCATCAGTAAATTTGCAGTCCATGAGCCTTTTTTTATAACTGGGAAGTCACCCTATACCCACGGTTCCTGCGCTTGGGGCAATGACTCAGCTAGTGAGGTTCTAACCGAGGCGCGTCAATTGCTGGTTGAAAACTATTTCTATACCCACAGTACCTGTGCCTGCCCCAAGCCAGCTCATGAGCTTTTGTTTGTGCTTTAAAGCATGATTGTGAGGATAACCTTGTTTTCTTTATTTACTCTTCCAGATAGTCTGAGTTCTCTTGCTTCTATTATTTTACCATGTGTCGATATTTTTTTATTCTCGTGTGTGACAGTGACAATATTTTTCAATTTTCTAAGTATATAAGTTTTTTTTTTCTTTTGGTTAATGAAGTTTTTTCTTTTTCAGAAATTCTTTGTTGCTACTGTCTGTAAATGTACTGTACCTTTTTATCCCAATAGCGCTCTGTATAACTCTTTGAGTTGTGTCTTGCATTTCAAGAGCATGCTGCTACTTAAGATGCATTGTACTCATTTACTTTTGTGCTCTTACATCTTTAAAACCACGGTTTTACTTGATTCATGTTGAGCAATTAGACTTGTTTCATCTTTAAAACCACGTTCATTTGACTCATGAGAAAATGGCAAGATATCATTGTATATCTAATAGATGTTGAAATTATCACACTTATCAGCATCTTTCTTACTCTCAACTAAAGCTTCTTTGGGCTTGTTGTTTTTTTTTTTTTGTATATTGTATTCTTTAATTTGTTTCATGAAGTTTGGCTTCTTACCCAAAAAAAGGCTCCTTATTTCTCACTGTTGATTTAGAGTTTAGGCTATATGATCCAAGTCATTAGTTTTGACAAATTCTAAGGTCAAAAGTGAGGTCTACATTCTGGTTACTTGAATTCTTCTTTTCCTTTTAGGTCACTGCACAGAGCACTTGACAGAAGACTATATCTTCTTCTCTATGGTACCTCTATTGGCGCACCTGATAAGAAACCTGTCTGGCACTTTCCCGAAAAAGTATACGAAACCGAGGAGACACTGCGTAAAGTGAGAGTCAGCTATCAACACTCTTCAGTTTTCTTTCTCATCAATTTTACCCTTCTAACTTTCAAGTACTGCAGTGTGCAGAGTCTGCCTTAGCGTCCATCCTTGGAGATCTTTCTCATACGTACTTCGTCGGAAATGCTCCAATGGGGCATATGGCCGTATCGCCTTCAGAAACTGCACAAGTTCCATCTTTGAAGGTATGTCTTCTACTAAAAGTTTATACCATATATTGGCTTCGAACATAGAGTAGGTTTACTGTATTGTGGTCGTTTACGACCATCATAGGTTGATCTAGTGGTCAAAGAGAACCTTGAAGATCCAATTATCCAAACGGTTATGATTCAATCTAGGTGTGGTTAAGAGGATCTTCGAGAACTAAGAGGTGATGTGTTCAATCCATATTGGCCACGTACTTTAGGAATTAATTTCCTATGTGTGTTTTCTTGACATCTAAATGTTGTAGGGTTAGACGGTATGTCTTGTCACAATAATTGAGATGTGACCAAGTTGACCTAGTCACATATATAAAAAAAAAGAAAACACCTACCTAGAAATTATTTTTTTGGGTTTTTTTGACATCTAAGTGTCATAGGGTCAGACAGTATACCTTGTGGCAACAATTGAGGTGCGTGCAAACTGACCCAAATAGTCATATATATAAAAAAAGAAAAGGAAAACACATGCCTAAGAAATAATTTCCTATAGATTTCCTTGACATCAAACTATTGTAGGGTCAAATGGTATGTCTCGTCAAAATAGTAGAGTGGCTACACACTCTCGAATATAAAAAAAAAAAGTGGTTGTATACTTGTTTACTTGAACGAAATTTTTCTTTGCCAGCGGTTCTTTTTCAAGTCCCAAGTGATTGCATCCAATAAATTCAATATTGGGAAATGTGAAGATTTTGTGTGGGTTACAAAGGATGAATTGATGGAATATTTTCCTGATGAAGCTGAATTTTTCAAGAAGATGATCATCAGTTGATGCAAGTAGATTGGCCATATATAAGCCTCATAGATTGTTTCAGAGTTTGTTAGTGAAGAAGAGGATTGAATTATTAAATGCTAAATTAAGGGTTGAGGCTGGAGGACTTTGTTTGTTGTTCTGATGTAAAATGGATGAATGAGTATCATCAATTTGGGAAATATTTCCTCTTCTTAGTTGTTTCTTTAATTATTGGGCAGTATGGATAAATGGTTCGATGCTCTTATTTTGATTTCTCGAATCATCGAGAGTACTTATTAGTACGTTCTCAAAACTTTGCATAGATTGACTTCTCTTTACATCATTGCTCCCATATCATACTTGAAGTAGAAACTCCAAACTAGACCTTAGACTTTGTAAGTTGGTATTATTGAGATTTGCCCTTATGGAATAAAGTTTTTATTTCATTCTAATATTAAA

mRNA sequence

CAACAACACACAAAAACTAGAAGAGATTTACGAAGCGCAACCCTCGCCGTCGACGGCGACTCTCTCTTCTCAGGATGCAGAGATCGTTCAGTTTAGCCGCTCAGCTGGTGAAGAGGCGAGGATTTTCGACGAATTCCGACAAGATTGTGGCGTCTGTACTGTTCGAGAGGCTGCCAGTCGTGATCCCGAAGATTGATCCTGCTATCTATGCATTTCAGGAGTTTCAGTTTAGGTGGCAACAGCAATATCGACGTAAATATCCCGATGAATTTTTAGATAAAGCTAATGCTAGGGGAAAAGGTGACTACCAAATTGATTATGTTCCAGCTCCACGGATTACGGAAGCTGACAAAACAAATGATAGGAAGTCACTGCACAGAGCACTTGACAGAAGACTATATCTTCTTCTCTATGGTACCTCTATTGGCGCACCTGATAAGAAACCTGTCTGGCACTTTCCCGAAAAAGTATACGAAACCGAGGAGACACTGCGTAAATGTGCAGAGTCTGCCTTAGCGTCCATCCTTGGAGATCTTTCTCATACGTACTTCGTCGGAAATGCTCCAATGGGGCATATGGCCGTATCGCCTTCAGAAACTGCACAAGTTCCATCTTTGAAGCGGTTCTTTTTCAAGTCCCAAGTGATTGCATCCAATAAATTCAATATTGGGAAATGTGAAGATTTTGTGTGGGTTACAAAGGATGAATTGATGGAATATTTTCCTGATGAAGCTGAATTTTTCAAGAAGATGATCATCAGTTGATGCAAGTAGATTGGCCATATATAAGCCTCATAGATTGTTTCAGAGTTTGTTAGTGAAGAAGAGGATTGAATTATTAAATGCTAAATTAAGGGTTGAGGCTGGAGGACTTTGTTTGTTGTTCTGATGTAAAATGGATGAATGAGTATCATCAATTTGGGAAATATTTCCTCTTCTTAGTTGTTTCTTTAATTATTGGGCAGTATGGATAAATGGTTCGATGCTCTTATTTTGATTTCTCGAATCATCGAGAGTACTTATTAGTACGTTCTCAAAACTTTGCATAGATTGACTTCTCTTTACATCATTGCTCCCATATCATACTTGAAGTAGAAACTCCAAACTAGACCTTAGACTTTGTAAGTTGGTATTATTGAGATTTGCCCTTATGGAATAAAGTTTTTATTTCATTCTAATATTAAA

Coding sequence (CDS)

ATGCAGAGATCGTTCAGTTTAGCCGCTCAGCTGGTGAAGAGGCGAGGATTTTCGACGAATTCCGACAAGATTGTGGCGTCTGTACTGTTCGAGAGGCTGCCAGTCGTGATCCCGAAGATTGATCCTGCTATCTATGCATTTCAGGAGTTTCAGTTTAGGTGGCAACAGCAATATCGACGTAAATATCCCGATGAATTTTTAGATAAAGCTAATGCTAGGGGAAAAGGTGACTACCAAATTGATTATGTTCCAGCTCCACGGATTACGGAAGCTGACAAAACAAATGATAGGAAGTCACTGCACAGAGCACTTGACAGAAGACTATATCTTCTTCTCTATGGTACCTCTATTGGCGCACCTGATAAGAAACCTGTCTGGCACTTTCCCGAAAAAGTATACGAAACCGAGGAGACACTGCGTAAATGTGCAGAGTCTGCCTTAGCGTCCATCCTTGGAGATCTTTCTCATACGTACTTCGTCGGAAATGCTCCAATGGGGCATATGGCCGTATCGCCTTCAGAAACTGCACAAGTTCCATCTTTGAAGCGGTTCTTTTTCAAGTCCCAAGTGATTGCATCCAATAAATTCAATATTGGGAAATGTGAAGATTTTGTGTGGGTTACAAAGGATGAATTGATGGAATATTTTCCTGATGAAGCTGAATTTTTCAAGAAGATGATCATCAGTTGA

Protein sequence

MQRSFSLAAQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPAIYAFQEFQFRWQQQYRRKYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLHRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMAVSPSETAQVPSLKRFFFKSQVIASNKFNIGKCEDFVWVTKDELMEYFPDEAEFFKKMIIS

Homology

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BLAST of Sed0018043 vs. NCBI nr
Match: XP_022992543.1 (39S ribosomal protein L46, mitochondrial-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 436.4 bits (1121), Expect = 1.5e-118
Identity = 209/229 (91.27%), Postives = 219/229 (95.63%), Query Frame = 0


Query: 1   MQRSFSLAAQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPAIYAFQEFQFRWQQQYRR 60
           MQRSFSLA+QL KRRGFSTNS+KIVASVLFERLPVVIPKIDP +YAFQEF+FRWQQQYRR
Sbjct: 1   MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 60

Query: 61  KYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLHRALDRRLYLLLYGTSIGAP 120
           +YPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSL RALDRRLYLLLYG SIGAP
Sbjct: 61  RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 120

Query: 121 DKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMAVSPSETAQVPS 180
           DKKP+WHFPEK YETEETLRKCAESAL S+LG LSHTYFVGNAPM HM V P+ETAQVPS
Sbjct: 121 DKKPIWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 180

Query: 181 LKRFFFKSQVIASNKFNIGKCEDFVWVTKDELMEYFPDEAEFFKKMIIS 230
           LKRFFFKSQVIA+NKFNIGKCEDFVWVTKDELMEYFPD+AEFFKKMIIS
Sbjct: 181 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 229

[Close]

BLAST of Sed0018043 vs. NCBI nr
Match: XP_022992541.1 (54S ribosomal protein L17, mitochondrial-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 436.4 bits (1121), Expect = 1.5e-118
Identity = 209/229 (91.27%), Postives = 219/229 (95.63%), Query Frame = 0


Query: 1   MQRSFSLAAQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPAIYAFQEFQFRWQQQYRR 60
           MQRSFSLA+QL KRRGFSTNS+KIVASVLFERLPVVIPKIDP +YAFQEF+FRWQQQYRR
Sbjct: 45  MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 104

Query: 61  KYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLHRALDRRLYLLLYGTSIGAP 120
           +YPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSL RALDRRLYLLLYG SIGAP
Sbjct: 105 RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 164

Query: 121 DKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMAVSPSETAQVPS 180
           DKKP+WHFPEK YETEETLRKCAESAL S+LG LSHTYFVGNAPM HM V P+ETAQVPS
Sbjct: 165 DKKPIWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 224

Query: 181 LKRFFFKSQVIASNKFNIGKCEDFVWVTKDELMEYFPDEAEFFKKMIIS 230
           LKRFFFKSQVIA+NKFNIGKCEDFVWVTKDELMEYFPD+AEFFKKMIIS
Sbjct: 225 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 273

[Close]

BLAST of Sed0018043 vs. NCBI nr
Match: XP_022992542.1 (39S ribosomal protein L46, mitochondrial-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 436.4 bits (1121), Expect = 1.5e-118
Identity = 209/229 (91.27%), Postives = 219/229 (95.63%), Query Frame = 0


Query: 1   MQRSFSLAAQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPAIYAFQEFQFRWQQQYRR 60
           MQRSFSLA+QL KRRGFSTNS+KIVASVLFERLPVVIPKIDP +YAFQEF+FRWQQQYRR
Sbjct: 17  MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 76

Query: 61  KYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLHRALDRRLYLLLYGTSIGAP 120
           +YPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSL RALDRRLYLLLYG SIGAP
Sbjct: 77  RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 136

Query: 121 DKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMAVSPSETAQVPS 180
           DKKP+WHFPEK YETEETLRKCAESAL S+LG LSHTYFVGNAPM HM V P+ETAQVPS
Sbjct: 137 DKKPIWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 196

Query: 181 LKRFFFKSQVIASNKFNIGKCEDFVWVTKDELMEYFPDEAEFFKKMIIS 230
           LKRFFFKSQVIA+NKFNIGKCEDFVWVTKDELMEYFPD+AEFFKKMIIS
Sbjct: 197 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 245

[Close]

BLAST of Sed0018043 vs. NCBI nr
Match: XP_022954202.1 (39S ribosomal protein L46, mitochondrial-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 436.0 bits (1120), Expect = 2.0e-118
Identity = 210/229 (91.70%), Postives = 219/229 (95.63%), Query Frame = 0


Query: 1   MQRSFSLAAQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPAIYAFQEFQFRWQQQYRR 60
           MQRSFSLA+QLVKRRGFSTNS+KIVASVLFERLPVVIPKIDP +YAFQEF+FRWQQQYRR
Sbjct: 17  MQRSFSLASQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 76

Query: 61  KYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLHRALDRRLYLLLYGTSIGAP 120
           +YPDE LDKANARGKGDYQIDYVPAPRITEADKTNDRKSL RALDRRLYLLLYG SIGAP
Sbjct: 77  RYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 136

Query: 121 DKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMAVSPSETAQVPS 180
           DKKPVWHFPEK YETEETLRKCAESAL S+LG LSHTYFVGNAPM HM V P+ETAQVPS
Sbjct: 137 DKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 196

Query: 181 LKRFFFKSQVIASNKFNIGKCEDFVWVTKDELMEYFPDEAEFFKKMIIS 230
           LKRFFFKSQVIA+NKFNIGKCEDFVWVTKDELMEYFPD+AEFFKKMIIS
Sbjct: 197 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 245

[Close]

BLAST of Sed0018043 vs. NCBI nr
Match: XP_022954203.1 (39S ribosomal protein L46, mitochondrial-like isoform X2 [Cucurbita moschata] >XP_022954204.1 39S ribosomal protein L46, mitochondrial-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 436.0 bits (1120), Expect = 2.0e-118
Identity = 210/229 (91.70%), Postives = 219/229 (95.63%), Query Frame = 0


Query: 1   MQRSFSLAAQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPAIYAFQEFQFRWQQQYRR 60
           MQRSFSLA+QLVKRRGFSTNS+KIVASVLFERLPVVIPKIDP +YAFQEF+FRWQQQYRR
Sbjct: 1   MQRSFSLASQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 60

Query: 61  KYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLHRALDRRLYLLLYGTSIGAP 120
           +YPDE LDKANARGKGDYQIDYVPAPRITEADKTNDRKSL RALDRRLYLLLYG SIGAP
Sbjct: 61  RYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 120

Query: 121 DKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMAVSPSETAQVPS 180
           DKKPVWHFPEK YETEETLRKCAESAL S+LG LSHTYFVGNAPM HM V P+ETAQVPS
Sbjct: 121 DKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 180

Query: 181 LKRFFFKSQVIASNKFNIGKCEDFVWVTKDELMEYFPDEAEFFKKMIIS 230
           LKRFFFKSQVIA+NKFNIGKCEDFVWVTKDELMEYFPD+AEFFKKMIIS
Sbjct: 181 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 229

[Close]

BLAST of Sed0018043 vs. ExPASy Swiss-Prot
Match: Q9EQI8 (39S ribosomal protein L46, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl46 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 7.0e-18
Identity = 55/139 (39.57%), Postives = 75/139 (53.96%), Query Frame = 0


Query: 80  IDYVPAPRITEADKTNDRKSLHRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETL 139
           + + P  R TEADK NDR SLHR LDR L +LL    +G  D   VW  P+  ++  ETL
Sbjct: 127 LQFRPGARETEADKKNDRTSLHRKLDRNL-VLLVREKLGDQD---VWMLPQVEWQPGETL 186

Query: 140 RKCAESALASILGDLSHTYFVGNAPMGHMAVSPSETAQVPS---LKRFFFKSQVIASNKF 199
           R  AE  LA++  +     F+GNAP GH      +  Q  S   +K FFFK+ ++  +  
Sbjct: 187 RGTAERILATLSENNMEAKFLGNAPCGHYKFKFPKAIQTESDLGVKVFFFKALLLTGDFV 246

Query: 200 NIGKCEDFVWVTKDELMEY 216
             GK    VW +K+EL +Y
Sbjct: 247 QAGKKSRHVWASKEELGDY 261

[Close]

BLAST of Sed0018043 vs. ExPASy Swiss-Prot
Match: Q5RK00 (39S ribosomal protein L46, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mrpl46 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 5.9e-17
Identity = 53/139 (38.13%), Postives = 75/139 (53.96%), Query Frame = 0


Query: 80  IDYVPAPRITEADKTNDRKSLHRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETL 139
           + + P  R TEADK NDR SLHR LDR L +LL    +G  D   +W  P+  ++  ETL
Sbjct: 127 LQFRPGARETEADKKNDRTSLHRKLDRNL-ILLVREKLGDQD---LWMLPQVEWQPGETL 186

Query: 140 RKCAESALASILGDLSHTYFVGNAPMGHMAVSPSETAQVPS---LKRFFFKSQVIASNKF 199
           R  AE  LA++  +     F+GNAP GH      +  +  S   +K FFFK+ ++  +  
Sbjct: 187 RGTAERILATLSENNMEAKFLGNAPCGHYKFKFPKAIRTESDLGVKVFFFKALLLTGDFV 246

Query: 200 NIGKCEDFVWVTKDELMEY 216
             GK    VW +K+EL +Y
Sbjct: 247 QTGKKGRHVWASKEELGDY 261

[Close]

BLAST of Sed0018043 vs. ExPASy Swiss-Prot
Match: Q9H2W6 (39S ribosomal protein L46, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL46 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.2e-16
Identity = 54/132 (40.91%), Postives = 71/132 (53.79%), Query Frame = 0


Query: 87  RITEADKTNDRKSLHRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESA 146
           RITEAD+ NDR SL+R LDR L +LL     G  D   VW  P+  ++  ETLR  AE  
Sbjct: 136 RITEADEKNDRTSLNRKLDRNL-VLLVREKFGDQD---VWILPQAEWQPGETLRGTAERT 195

Query: 147 LASILGDLSHTYFVGNAPMGHMAVSPSETAQVPS---LKRFFFKSQVIASNKFNIGKCED 206
           LA++  +     F+GNAP GH      +  +  S    K FFFK+ ++  +    G    
Sbjct: 196 LATLSENNMEAKFLGNAPCGHYTFKFPQAMRTESNLGAKVFFFKALLLTGDFSQAGNKGH 255

Query: 207 FVWVTKDELMEY 216
            VWVTKDEL +Y
Sbjct: 256 HVWVTKDELGDY 263

[Close]

BLAST of Sed0018043 vs. ExPASy Swiss-Prot
Match: Q5RBU2 (39S ribosomal protein L46, mitochondrial OS=Pongo abelii OX=9601 GN=MRPL46 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.2e-16
Identity = 54/132 (40.91%), Postives = 71/132 (53.79%), Query Frame = 0


Query: 87  RITEADKTNDRKSLHRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESA 146
           RITEAD+ NDR SL+R LDR L +LL     G  D   VW  P+  ++  ETLR  AE  
Sbjct: 136 RITEADEKNDRTSLNRKLDRNL-VLLVREKFGDQD---VWILPQTEWQPGETLRGTAERT 195

Query: 147 LASILGDLSHTYFVGNAPMGHMAVSPSETAQVPS---LKRFFFKSQVIASNKFNIGKCED 206
           LA++  +     F+GNAP GH      +  +  S    K FFFK+ ++  +    G    
Sbjct: 196 LATLSENNMEAKFLGNAPCGHYTFKFPQAMRTESNLGAKVFFFKALLLTGDFSQAGNKGH 255

Query: 207 FVWVTKDELMEY 216
            VWVTKDEL +Y
Sbjct: 256 HVWVTKDELGDY 263

[Close]

BLAST of Sed0018043 vs. ExPASy Swiss-Prot
Match: Q3SZ22 (39S ribosomal protein L46, mitochondrial OS=Bos taurus OX=9913 GN=MRPL46 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.9e-15
Identity = 53/139 (38.13%), Postives = 74/139 (53.24%), Query Frame = 0


Query: 80  IDYVPAPRITEADKTNDRKSLHRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETL 139
           + + P  RIT+AD  NDR SLHR LDR L +LL    +G  D   VW  P+  ++  ETL
Sbjct: 127 LQFKPGARITDADVKNDRSSLHRKLDRNL-ILLVKDKLGDQD---VWMLPQAEWQPGETL 186

Query: 140 RKCAESALASILGDLSHTYFVGNAPMGHMAVS-PSETAQVPSL--KRFFFKSQVIASNKF 199
           R+ AE  LA++  +     F+GNAP GH     P       SL  K FFFK+ ++  +  
Sbjct: 187 RQTAERTLATLSENNLEAKFLGNAPCGHYKFKFPQAVRAEGSLGAKIFFFKALLLTGDFS 246

Query: 200 NIGKCEDFVWVTKDELMEY 216
              +    VW +K+EL +Y
Sbjct: 247 PAVEKGRHVWASKEELGDY 261

[Close]

BLAST of Sed0018043 vs. ExPASy TrEMBL
Match: A0A6J1JQ58 (39S ribosomal protein L46, mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488836 PE=4 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 7.3e-119
Identity = 209/229 (91.27%), Postives = 219/229 (95.63%), Query Frame = 0


Query: 1   MQRSFSLAAQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPAIYAFQEFQFRWQQQYRR 60
           MQRSFSLA+QL KRRGFSTNS+KIVASVLFERLPVVIPKIDP +YAFQEF+FRWQQQYRR
Sbjct: 17  MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 76

Query: 61  KYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLHRALDRRLYLLLYGTSIGAP 120
           +YPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSL RALDRRLYLLLYG SIGAP
Sbjct: 77  RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 136

Query: 121 DKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMAVSPSETAQVPS 180
           DKKP+WHFPEK YETEETLRKCAESAL S+LG LSHTYFVGNAPM HM V P+ETAQVPS
Sbjct: 137 DKKPIWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 196

Query: 181 LKRFFFKSQVIASNKFNIGKCEDFVWVTKDELMEYFPDEAEFFKKMIIS 230
           LKRFFFKSQVIA+NKFNIGKCEDFVWVTKDELMEYFPD+AEFFKKMIIS
Sbjct: 197 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 245

[Close]

BLAST of Sed0018043 vs. ExPASy TrEMBL
Match: A0A6J1JZI9 (39S ribosomal protein L46, mitochondrial-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111488836 PE=4 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 7.3e-119
Identity = 209/229 (91.27%), Postives = 219/229 (95.63%), Query Frame = 0


Query: 1   MQRSFSLAAQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPAIYAFQEFQFRWQQQYRR 60
           MQRSFSLA+QL KRRGFSTNS+KIVASVLFERLPVVIPKIDP +YAFQEF+FRWQQQYRR
Sbjct: 1   MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 60

Query: 61  KYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLHRALDRRLYLLLYGTSIGAP 120
           +YPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSL RALDRRLYLLLYG SIGAP
Sbjct: 61  RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 120

Query: 121 DKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMAVSPSETAQVPS 180
           DKKP+WHFPEK YETEETLRKCAESAL S+LG LSHTYFVGNAPM HM V P+ETAQVPS
Sbjct: 121 DKKPIWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 180

Query: 181 LKRFFFKSQVIASNKFNIGKCEDFVWVTKDELMEYFPDEAEFFKKMIIS 230
           LKRFFFKSQVIA+NKFNIGKCEDFVWVTKDELMEYFPD+AEFFKKMIIS
Sbjct: 181 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 229

[Close]

BLAST of Sed0018043 vs. ExPASy TrEMBL
Match: A0A6J1JTU9 (54S ribosomal protein L17, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488836 PE=4 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 7.3e-119
Identity = 209/229 (91.27%), Postives = 219/229 (95.63%), Query Frame = 0


Query: 1   MQRSFSLAAQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPAIYAFQEFQFRWQQQYRR 60
           MQRSFSLA+QL KRRGFSTNS+KIVASVLFERLPVVIPKIDP +YAFQEF+FRWQQQYRR
Sbjct: 45  MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 104

Query: 61  KYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLHRALDRRLYLLLYGTSIGAP 120
           +YPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSL RALDRRLYLLLYG SIGAP
Sbjct: 105 RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 164

Query: 121 DKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMAVSPSETAQVPS 180
           DKKP+WHFPEK YETEETLRKCAESAL S+LG LSHTYFVGNAPM HM V P+ETAQVPS
Sbjct: 165 DKKPIWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 224

Query: 181 LKRFFFKSQVIASNKFNIGKCEDFVWVTKDELMEYFPDEAEFFKKMIIS 230
           LKRFFFKSQVIA+NKFNIGKCEDFVWVTKDELMEYFPD+AEFFKKMIIS
Sbjct: 225 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 273

[Close]

BLAST of Sed0018043 vs. ExPASy TrEMBL
Match: A0A6J1GQF1 (39S ribosomal protein L46, mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456531 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 9.5e-119
Identity = 210/229 (91.70%), Postives = 219/229 (95.63%), Query Frame = 0


Query: 1   MQRSFSLAAQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPAIYAFQEFQFRWQQQYRR 60
           MQRSFSLA+QLVKRRGFSTNS+KIVASVLFERLPVVIPKIDP +YAFQEF+FRWQQQYRR
Sbjct: 1   MQRSFSLASQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 60

Query: 61  KYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLHRALDRRLYLLLYGTSIGAP 120
           +YPDE LDKANARGKGDYQIDYVPAPRITEADKTNDRKSL RALDRRLYLLLYG SIGAP
Sbjct: 61  RYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 120

Query: 121 DKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMAVSPSETAQVPS 180
           DKKPVWHFPEK YETEETLRKCAESAL S+LG LSHTYFVGNAPM HM V P+ETAQVPS
Sbjct: 121 DKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 180

Query: 181 LKRFFFKSQVIASNKFNIGKCEDFVWVTKDELMEYFPDEAEFFKKMIIS 230
           LKRFFFKSQVIA+NKFNIGKCEDFVWVTKDELMEYFPD+AEFFKKMIIS
Sbjct: 181 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 229

[Close]

BLAST of Sed0018043 vs. ExPASy TrEMBL
Match: A0A6J1GQE8 (39S ribosomal protein L46, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456531 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 9.5e-119
Identity = 210/229 (91.70%), Postives = 219/229 (95.63%), Query Frame = 0


Query: 1   MQRSFSLAAQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPAIYAFQEFQFRWQQQYRR 60
           MQRSFSLA+QLVKRRGFSTNS+KIVASVLFERLPVVIPKIDP +YAFQEF+FRWQQQYRR
Sbjct: 17  MQRSFSLASQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 76

Query: 61  KYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLHRALDRRLYLLLYGTSIGAP 120
           +YPDE LDKANARGKGDYQIDYVPAPRITEADKTNDRKSL RALDRRLYLLLYG SIGAP
Sbjct: 77  RYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 136

Query: 121 DKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMAVSPSETAQVPS 180
           DKKPVWHFPEK YETEETLRKCAESAL S+LG LSHTYFVGNAPM HM V P+ETAQVPS
Sbjct: 137 DKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 196

Query: 181 LKRFFFKSQVIASNKFNIGKCEDFVWVTKDELMEYFPDEAEFFKKMIIS 230
           LKRFFFKSQVIA+NKFNIGKCEDFVWVTKDELMEYFPD+AEFFKKMIIS
Sbjct: 197 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 245

[Close]

BLAST of Sed0018043 vs. TAIR 10
Match: AT1G14620.1 (decoy )

HSP 1 Score: 342.8 bits (878), Expect = 2.1e-94
Identity = 160/220 (72.73%), Postives = 189/220 (85.91%), Query Frame = 0


Query: 11  LVKRRGFSTNSDKIVASVLFERLPVVIPKIDPAIYAFQEFQFRWQQQYRRKYPDEFLDKA 70
           L  RRGF T+SDKIVASVLFERL VVIPK DPA+YAFQEF+F WQQQ+RR+YPDEFLD A
Sbjct: 14  LESRRGFCTSSDKIVASVLFERLRVVIPKPDPAVYAFQEFKFNWQQQFRRRYPDEFLDIA 73

Query: 71  NARGKGDYQIDYVPAPRITEADKTNDRKSLHRALDRRLYLLLYGTSIGAPDKKPVWHFPE 130
             R KG+YQ+DYVPAPRITEADK NDRKSL+RALD++LYLL++G   GA   KPVWHFPE
Sbjct: 74  KNRAKGEYQMDYVPAPRITEADKNNDRKSLYRALDKKLYLLIFGKPFGATSDKPVWHFPE 133

Query: 131 KVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMAVSPS-ETAQVPSLKRFFFKSQ 190
           KVY++E TLRKCAESAL S++GDL+HTYFVGNAPM HMA+ P+ E   +PS KRFFFK  
Sbjct: 134 KVYDSEPTLRKCAESALKSVVGDLTHTYFVGNAPMAHMAIQPTEEMPDLPSYKRFFFKCS 193

Query: 191 VIASNKFNIGKCEDFVWVTKDELMEYFPDEAEFFKKMIIS 230
           V+A++K++I  CEDFVWVTKDEL+E+FP++AEFF KMIIS
Sbjct: 194 VVAASKYDISNCEDFVWVTKDELLEFFPEQAEFFNKMIIS 233

[Close]

BLAST of Sed0018043 vs. TAIR 10
Match: AT1G14620.2 (decoy )

HSP 1 Score: 270.0 bits (689), Expect = 1.7e-72
Identity = 129/188 (68.62%), Postives = 153/188 (81.38%), Query Frame = 0


Query: 11  LVKRRGFSTNSDKIVASVLFERLPVVIPKIDPAIYAFQEFQFRWQQQYRRKYPDEFLDKA 70
           L  RRGF T+SDKIVASVLFERL VVIPK DPA+YAFQEF+F WQQQ+RR+YPDEFLD A
Sbjct: 14  LESRRGFCTSSDKIVASVLFERLRVVIPKPDPAVYAFQEFKFNWQQQFRRRYPDEFLDIA 73

Query: 71  NARGKGDYQIDYVPAPRITEADKTNDRKSLHRALDRRLYLLLYGTSIGAPDKKPVWHFPE 130
             R KG+YQ+DYVPAPRITEADK NDRKSL+RALD++LYLL++G   GA   KPVWHFPE
Sbjct: 74  KNRAKGEYQMDYVPAPRITEADKNNDRKSLYRALDKKLYLLIFGKPFGATSDKPVWHFPE 133

Query: 131 KVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMAVSPSETAQVPSLKRFFFKSQV 190
           KVY++E TLRKCAESAL S++GDL+HTYFVGNAPM HMA+ P+E  ++P L  +    Q+
Sbjct: 134 KVYDSEPTLRKCAESALKSVVGDLTHTYFVGNAPMAHMAIQPTE--EMPDLPSYKVLLQM 193

Query: 191 IASNKFNI 199
             S+   I
Sbjct: 194 QCSSSIEI 199

The following BLAST results are available for this feature:

BLAST of Sed0018043 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022992543.1	1.5e-118	91.27	39S ribosomal protein L46, mitochondrial-like isoform X3 [Cucurbita maxima]	[more]
XP_022992541.1	1.5e-118	91.27	54S ribosomal protein L17, mitochondrial-like isoform X1 [Cucurbita maxima]	[more]
XP_022992542.1	1.5e-118	91.27	39S ribosomal protein L46, mitochondrial-like isoform X2 [Cucurbita maxima]	[more]
XP_022954202.1	2.0e-118	91.70	39S ribosomal protein L46, mitochondrial-like isoform X1 [Cucurbita moschata]	[more]
XP_022954203.1	2.0e-118	91.70	39S ribosomal protein L46, mitochondrial-like isoform X2 [Cucurbita moschata] >X...	[more]

BLAST of Sed0018043 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9EQI8	7.0e-18	39.57	39S ribosomal protein L46, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl46 PE=1...	[more]
Q5RK00	5.9e-17	38.13	39S ribosomal protein L46, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mrpl46...	[more]
Q9H2W6	2.2e-16	40.91	39S ribosomal protein L46, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL46 PE=1 ...	[more]
Q5RBU2	2.2e-16	40.91	39S ribosomal protein L46, mitochondrial OS=Pongo abelii OX=9601 GN=MRPL46 PE=2 ...	[more]
Q3SZ22	1.9e-15	38.13	39S ribosomal protein L46, mitochondrial OS=Bos taurus OX=9913 GN=MRPL46 PE=2 SV...	[more]

BLAST of Sed0018043 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JQ58	7.3e-119	91.27	39S ribosomal protein L46, mitochondrial-like isoform X2 OS=Cucurbita maxima OX=...	[more]
A0A6J1JZI9	7.3e-119	91.27	39S ribosomal protein L46, mitochondrial-like isoform X3 OS=Cucurbita maxima OX=...	[more]
A0A6J1JTU9	7.3e-119	91.27	54S ribosomal protein L17, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=...	[more]
A0A6J1GQF1	9.5e-119	91.70	39S ribosomal protein L46, mitochondrial-like isoform X2 OS=Cucurbita moschata O...	[more]
A0A6J1GQE8	9.5e-119	91.70	39S ribosomal protein L46, mitochondrial-like isoform X1 OS=Cucurbita moschata O...	[more]

BLAST of Sed0018043 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14620.1	2.1e-94	72.73	decoy	[more]
AT1G14620.2	1.7e-72	68.62	decoy	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.79.10	Nucleoside Triphosphate Pyrophosphohydrolase	coord: 96..229 e-value: 1.6E-31 score: 110.8
None	No IPR available	PANTHER	PTHR13124:SF14	SUBFAMILY NOT NAMED	coord: 1..229
IPR040008	39S ribosomal protein L46, mitochondrial	PANTHER	PTHR13124	39S RIBOSOMAL PROTEIN L46, MITOCHONDRIAL PRECURSOR-RELATED	coord: 1..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018043.1	Sed0018043.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome