Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGCCCTAAATTCCATGCATACATTTTTATTACTGGTCGTCGTCCTCTTCGCGCTCTTCTCTCCGGTTAAACCAGATGCGGCGTTCATCCAAAACCTCTGCCGCAAGACGGAGCAGCCGGTGATATGTTCCGATTGCCTCAGATCGGGGGCCCGCAGCCAGTACGCCAACGGTCGTGGACTCGCACTCATCGCCATCGGATGCGCCGAGAGAAATACGAGACTAATGGCACAGAGGCTTGGCGACCTTGTCCGCGTAACGCCCAACTCCCCACTGAAGAACATCTTGAACCATTGCTGGGTGTCCGCAGGAGTGGCTGCCCGCAATTTCCCCGCAATCAGAAGCGTCGTCGCGGCCGGGGACTACGCGGGCGGGAGAAACGGTGTGGATATGAGCGTTTGGAAGGTGAATACCTGCTTGACGGAGTTCAATGGTAACCCTACACTGCCGGTGCCGTCGGTGGTTTTGGCGGGGACGGTGGCCGTCGTCCAAAGCTGCCGGATTGTTTCTGGGATTTTGAAAAACATTTGA
mRNA sequence
ATGAATGCCCTAAATTCCATGCATACATTTTTATTACTGGTCGTCGTCCTCTTCGCGCTCTTCTCTCCGGTTAAACCAGATGCGGCGTTCATCCAAAACCTCTGCCGCAAGACGGAGCAGCCGGTGATATGTTCCGATTGCCTCAGATCGGGGGCCCGCAGCCAGTACGCCAACGGTCGTGGACTCGCACTCATCGCCATCGGATGCGCCGAGAGAAATACGAGACTAATGGCACAGAGGCTTGGCGACCTTGTCCGCGTAACGCCCAACTCCCCACTGAAGAACATCTTGAACCATTGCTGGGTGTCCGCAGGAGTGGCTGCCCGCAATTTCCCCGCAATCAGAAGCGTCGTCGCGGCCGGGGACTACGCGGGCGGGAGAAACGGTGTGGATATGAGCGTTTGGAAGGTGAATACCTGCTTGACGGAGTTCAATGGTAACCCTACACTGCCGGTGCCGTCGGTGGTTTTGGCGGGGACGGTGGCCGTCGTCCAAAGCTGCCGGATTGTTTCTGGGATTTTGAAAAACATTTGA
Coding sequence (CDS)
ATGAATGCCCTAAATTCCATGCATACATTTTTATTACTGGTCGTCGTCCTCTTCGCGCTCTTCTCTCCGGTTAAACCAGATGCGGCGTTCATCCAAAACCTCTGCCGCAAGACGGAGCAGCCGGTGATATGTTCCGATTGCCTCAGATCGGGGGCCCGCAGCCAGTACGCCAACGGTCGTGGACTCGCACTCATCGCCATCGGATGCGCCGAGAGAAATACGAGACTAATGGCACAGAGGCTTGGCGACCTTGTCCGCGTAACGCCCAACTCCCCACTGAAGAACATCTTGAACCATTGCTGGGTGTCCGCAGGAGTGGCTGCCCGCAATTTCCCCGCAATCAGAAGCGTCGTCGCGGCCGGGGACTACGCGGGCGGGAGAAACGGTGTGGATATGAGCGTTTGGAAGGTGAATACCTGCTTGACGGAGTTCAATGGTAACCCTACACTGCCGGTGCCGTCGGTGGTTTTGGCGGGGACGGTGGCCGTCGTCCAAAGCTGCCGGATTGTTTCTGGGATTTTGAAAAACATTTGA
Protein sequence
MNALNSMHTFLLLVVVLFALFSPVKPDAAFIQNLCRKTEQPVICSDCLRSGARSQYANGRGLALIAIGCAERNTRLMAQRLGDLVRVTPNSPLKNILNHCWVSAGVAARNFPAIRSVVAAGDYAGGRNGVDMSVWKVNTCLTEFNGNPTLPVPSVVLAGTVAVVQSCRIVSGILKNI
Homology
BLAST of Sed0017979 vs. NCBI nr
Match:
XP_022940751.1 (uncharacterized protein LOC111446254 [Cucurbita moschata] >KAG7037425.1 hypothetical protein SDJN02_01051, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 233.4 bits (594), Expect = 1.5e-57
Identity = 119/177 (67.23%), Postives = 136/177 (76.84%), Query Frame = 0
Query: 1 MNALNSMHTFLLLVVVLFALFSPVKPDAAFIQNLCRKTEQPVICSDCLRSGARSQYANGR 60
MN NSM LL LFALFSP KPDAA I+NLC +TEQPVICS CL S + S+ ANGR
Sbjct: 1 MNPFNSMLPLFLL--ALFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGR 60
Query: 61 GLALIAIGCAERNTRLMAQRLGDLVRVTPNSPLKNILNHCWVSAGVAARNFPAIRSVVAA 120
GLA+IA+GCAERNTR MAQR+GD+ R TPNSP+K +LN CW S G AA NFP IRS V
Sbjct: 61 GLAVIAVGCAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVQG 120
Query: 121 GDYAGGRNGVDMSVWKVNTCLTEFNGNPTLPVPSVVLAGTVAVVQSCRIVSGILKNI 178
GDYA RNGV++S+ VN+CL F+ NP++PVPS VLAGTVA VQSCRIV GIL NI
Sbjct: 121 GDYARARNGVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 175
BLAST of Sed0017979 vs. NCBI nr
Match:
XP_023523451.1 (uncharacterized protein LOC111787665 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 230.3 bits (586), Expect = 1.3e-56
Identity = 117/177 (66.10%), Postives = 136/177 (76.84%), Query Frame = 0
Query: 1 MNALNSMHTFLLLVVVLFALFSPVKPDAAFIQNLCRKTEQPVICSDCLRSGARSQYANGR 60
MN NSM LL LFALFSP KPDAA I+NLC +TEQPVICS CL S + S+ ANGR
Sbjct: 27 MNPFNSMLPLFLL--ALFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGR 86
Query: 61 GLALIAIGCAERNTRLMAQRLGDLVRVTPNSPLKNILNHCWVSAGVAARNFPAIRSVVAA 120
GLA+IA+GCAERNTR MAQR+GD+ R TPNSP+K +LN CW S G AA NFP IR+ V
Sbjct: 87 GLAVIAVGCAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRNAVQG 146
Query: 121 GDYAGGRNGVDMSVWKVNTCLTEFNGNPTLPVPSVVLAGTVAVVQSCRIVSGILKNI 178
GDYA RNGV++S+ VN+CL F+ NP++PVPS VLAGTVA VQSCRIV GIL +I
Sbjct: 147 GDYARARNGVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNHI 201
BLAST of Sed0017979 vs. NCBI nr
Match:
KAG6607897.1 (hypothetical protein SDJN03_01239, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 229.9 bits (585), Expect = 1.7e-56
Identity = 113/166 (68.07%), Postives = 132/166 (79.52%), Query Frame = 0
Query: 12 LLVVVLFALFSPVKPDAAFIQNLCRKTEQPVICSDCLRSGARSQYANGRGLALIAIGCAE 71
L ++ LFALFSP KPDAA I+NLC +TEQPVICS CL S + S+ ANGRGLA+IA+GCAE
Sbjct: 4 LFLLALFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGLAVIAVGCAE 63
Query: 72 RNTRLMAQRLGDLVRVTPNSPLKNILNHCWVSAGVAARNFPAIRSVVAAGDYAGGRNGVD 131
RNTR MAQR+GD+ R TPNSP+K +LN CW S G AA NFP IRS V GDYA RNGV+
Sbjct: 64 RNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVQGGDYARARNGVE 123
Query: 132 MSVWKVNTCLTEFNGNPTLPVPSVVLAGTVAVVQSCRIVSGILKNI 178
+S+ VN+CL F+ NP++PVPS VLAGTVA VQSCRIV GIL NI
Sbjct: 124 ISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 169
BLAST of Sed0017979 vs. NCBI nr
Match:
XP_022981703.1 (uncharacterized protein LOC111480766 [Cucurbita maxima])
HSP 1 Score: 229.6 bits (584), Expect = 2.2e-56
Identity = 118/177 (66.67%), Postives = 135/177 (76.27%), Query Frame = 0
Query: 1 MNALNSMHTFLLLVVVLFALFSPVKPDAAFIQNLCRKTEQPVICSDCLRSGARSQYANGR 60
MN NSM LL V FA FSP KPDAA I+NLC +TEQPVICS CL S + S+ ANGR
Sbjct: 1 MNPFNSMLPLFLLSV--FAPFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGR 60
Query: 61 GLALIAIGCAERNTRLMAQRLGDLVRVTPNSPLKNILNHCWVSAGVAARNFPAIRSVVAA 120
GLA+IA+GCAERNTR MAQR+GD+ R TPNSP+K +LN CW S G AA NFP IRS V
Sbjct: 61 GLAVIAVGCAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVEE 120
Query: 121 GDYAGGRNGVDMSVWKVNTCLTEFNGNPTLPVPSVVLAGTVAVVQSCRIVSGILKNI 178
GDYA RNGV++S+ VN+CL F+ NP++PVPS VLAGTVA VQSCRIV GIL NI
Sbjct: 121 GDYARARNGVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 175
BLAST of Sed0017979 vs. NCBI nr
Match:
XP_008463801.1 (PREDICTED: pectinesterase inhibitor-like [Cucumis melo] >KAA0066803.1 pectinesterase inhibitor-like [Cucumis melo var. makuwa] >TYK27950.1 pectinesterase inhibitor-like [Cucumis melo var. makuwa])
HSP 1 Score: 228.4 bits (581), Expect = 4.8e-56
Identity = 117/177 (66.10%), Postives = 136/177 (76.84%), Query Frame = 0
Query: 1 MNALNSMHTFLLLVVVLFALFSPVKPDAAFIQNLCRKTEQPVICSDCLRSGARSQYANGR 60
MN LNS +LL+ +LFALFSP KPDAA+I NLC KTEQP ICSDCL SG SQ A+GR
Sbjct: 1 MNLLNS----ILLISLLFALFSPAKPDAAYIGNLCSKTEQPKICSDCLNSGRGSQSASGR 60
Query: 61 GLALIAIGCAERNTRLMAQRLGDLVRVTPNSPLKNILNHCWVSAGVAARNFPAIRSVVAA 120
GLALIA+GCAERNT+LMAQR+G+LVR TP S LK +LN CW+S G AA NFP I VAA
Sbjct: 61 GLALIAVGCAERNTKLMAQRVGNLVRSTPESTLKMLLNECWMSTGYAAGNFPGIARSVAA 120
Query: 121 GDYAGGRNGVDMSVWKVNTCLTEFNGNPTLPVPSVVLAGTVAVVQSCRIVSGILKNI 178
GDYA G+N +++++ VN CL F NP +PVPS VLAGTVAV Q CRIV+ IL NI
Sbjct: 121 GDYASGKNVLEITIRNVNMCLVNFKKNPNIPVPSEVLAGTVAVTQDCRIVTQILNNI 173
BLAST of Sed0017979 vs. ExPASy TrEMBL
Match:
A0A6J1FJC0 (uncharacterized protein LOC111446254 OS=Cucurbita moschata OX=3662 GN=LOC111446254 PE=4 SV=1)
HSP 1 Score: 233.4 bits (594), Expect = 7.2e-58
Identity = 119/177 (67.23%), Postives = 136/177 (76.84%), Query Frame = 0
Query: 1 MNALNSMHTFLLLVVVLFALFSPVKPDAAFIQNLCRKTEQPVICSDCLRSGARSQYANGR 60
MN NSM LL LFALFSP KPDAA I+NLC +TEQPVICS CL S + S+ ANGR
Sbjct: 1 MNPFNSMLPLFLL--ALFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGR 60
Query: 61 GLALIAIGCAERNTRLMAQRLGDLVRVTPNSPLKNILNHCWVSAGVAARNFPAIRSVVAA 120
GLA+IA+GCAERNTR MAQR+GD+ R TPNSP+K +LN CW S G AA NFP IRS V
Sbjct: 61 GLAVIAVGCAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVQG 120
Query: 121 GDYAGGRNGVDMSVWKVNTCLTEFNGNPTLPVPSVVLAGTVAVVQSCRIVSGILKNI 178
GDYA RNGV++S+ VN+CL F+ NP++PVPS VLAGTVA VQSCRIV GIL NI
Sbjct: 121 GDYARARNGVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 175
BLAST of Sed0017979 vs. ExPASy TrEMBL
Match:
A0A6J1J2U5 (uncharacterized protein LOC111480766 OS=Cucurbita maxima OX=3661 GN=LOC111480766 PE=4 SV=1)
HSP 1 Score: 229.6 bits (584), Expect = 1.0e-56
Identity = 118/177 (66.67%), Postives = 135/177 (76.27%), Query Frame = 0
Query: 1 MNALNSMHTFLLLVVVLFALFSPVKPDAAFIQNLCRKTEQPVICSDCLRSGARSQYANGR 60
MN NSM LL V FA FSP KPDAA I+NLC +TEQPVICS CL S + S+ ANGR
Sbjct: 1 MNPFNSMLPLFLLSV--FAPFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGR 60
Query: 61 GLALIAIGCAERNTRLMAQRLGDLVRVTPNSPLKNILNHCWVSAGVAARNFPAIRSVVAA 120
GLA+IA+GCAERNTR MAQR+GD+ R TPNSP+K +LN CW S G AA NFP IRS V
Sbjct: 61 GLAVIAVGCAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVEE 120
Query: 121 GDYAGGRNGVDMSVWKVNTCLTEFNGNPTLPVPSVVLAGTVAVVQSCRIVSGILKNI 178
GDYA RNGV++S+ VN+CL F+ NP++PVPS VLAGTVA VQSCRIV GIL NI
Sbjct: 121 GDYARARNGVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 175
BLAST of Sed0017979 vs. ExPASy TrEMBL
Match:
A0A5D3DXI0 (Pectinesterase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001540 PE=4 SV=1)
HSP 1 Score: 228.4 bits (581), Expect = 2.3e-56
Identity = 117/177 (66.10%), Postives = 136/177 (76.84%), Query Frame = 0
Query: 1 MNALNSMHTFLLLVVVLFALFSPVKPDAAFIQNLCRKTEQPVICSDCLRSGARSQYANGR 60
MN LNS +LL+ +LFALFSP KPDAA+I NLC KTEQP ICSDCL SG SQ A+GR
Sbjct: 1 MNLLNS----ILLISLLFALFSPAKPDAAYIGNLCSKTEQPKICSDCLNSGRGSQSASGR 60
Query: 61 GLALIAIGCAERNTRLMAQRLGDLVRVTPNSPLKNILNHCWVSAGVAARNFPAIRSVVAA 120
GLALIA+GCAERNT+LMAQR+G+LVR TP S LK +LN CW+S G AA NFP I VAA
Sbjct: 61 GLALIAVGCAERNTKLMAQRVGNLVRSTPESTLKMLLNECWMSTGYAAGNFPGIARSVAA 120
Query: 121 GDYAGGRNGVDMSVWKVNTCLTEFNGNPTLPVPSVVLAGTVAVVQSCRIVSGILKNI 178
GDYA G+N +++++ VN CL F NP +PVPS VLAGTVAV Q CRIV+ IL NI
Sbjct: 121 GDYASGKNVLEITIRNVNMCLVNFKKNPNIPVPSEVLAGTVAVTQDCRIVTQILNNI 173
BLAST of Sed0017979 vs. ExPASy TrEMBL
Match:
A0A1S3CK48 (pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103501854 PE=4 SV=1)
HSP 1 Score: 228.4 bits (581), Expect = 2.3e-56
Identity = 117/177 (66.10%), Postives = 136/177 (76.84%), Query Frame = 0
Query: 1 MNALNSMHTFLLLVVVLFALFSPVKPDAAFIQNLCRKTEQPVICSDCLRSGARSQYANGR 60
MN LNS +LL+ +LFALFSP KPDAA+I NLC KTEQP ICSDCL SG SQ A+GR
Sbjct: 1 MNLLNS----ILLISLLFALFSPAKPDAAYIGNLCSKTEQPKICSDCLNSGRGSQSASGR 60
Query: 61 GLALIAIGCAERNTRLMAQRLGDLVRVTPNSPLKNILNHCWVSAGVAARNFPAIRSVVAA 120
GLALIA+GCAERNT+LMAQR+G+LVR TP S LK +LN CW+S G AA NFP I VAA
Sbjct: 61 GLALIAVGCAERNTKLMAQRVGNLVRSTPESTLKMLLNECWMSTGYAAGNFPGIARSVAA 120
Query: 121 GDYAGGRNGVDMSVWKVNTCLTEFNGNPTLPVPSVVLAGTVAVVQSCRIVSGILKNI 178
GDYA G+N +++++ VN CL F NP +PVPS VLAGTVAV Q CRIV+ IL NI
Sbjct: 121 GDYASGKNVLEITIRNVNMCLVNFKKNPNIPVPSEVLAGTVAVTQDCRIVTQILNNI 173
BLAST of Sed0017979 vs. ExPASy TrEMBL
Match:
A0A0A0L044 (PMEI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G628950 PE=4 SV=1)
HSP 1 Score: 219.9 bits (559), Expect = 8.3e-54
Identity = 114/177 (64.41%), Postives = 134/177 (75.71%), Query Frame = 0
Query: 1 MNALNSMHTFLLLVVVLFALFSPVKPDAAFIQNLCRKTEQPVICSDCLRSGARSQYANGR 60
MN LNS LL+ +LFALFSP KPDAA+IQNLC KTEQP ICSDCL SG SQ A GR
Sbjct: 1 MNLLNS----TLLISLLFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGR 60
Query: 61 GLALIAIGCAERNTRLMAQRLGDLVRVTPNSPLKNILNHCWVSAGVAARNFPAIRSVVAA 120
GLALIA+ CAERNT+LMAQR+G+LVR TP S LK +LN CW+S G AA NFP I VAA
Sbjct: 61 GLALIAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAA 120
Query: 121 GDYAGGRNGVDMSVWKVNTCLTEFNGNPTLPVPSVVLAGTVAVVQSCRIVSGILKNI 178
GDY GG++ +++++ VN C+ F NP++ VPS VLAGTVAV Q CRIV+ IL NI
Sbjct: 121 GDYGGGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 173
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022940751.1 | 1.5e-57 | 67.23 | uncharacterized protein LOC111446254 [Cucurbita moschata] >KAG7037425.1 hypothet... | [more] |
XP_023523451.1 | 1.3e-56 | 66.10 | uncharacterized protein LOC111787665 [Cucurbita pepo subsp. pepo] | [more] |
KAG6607897.1 | 1.7e-56 | 68.07 | hypothetical protein SDJN03_01239, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022981703.1 | 2.2e-56 | 66.67 | uncharacterized protein LOC111480766 [Cucurbita maxima] | [more] |
XP_008463801.1 | 4.8e-56 | 66.10 | PREDICTED: pectinesterase inhibitor-like [Cucumis melo] >KAA0066803.1 pectineste... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1FJC0 | 7.2e-58 | 67.23 | uncharacterized protein LOC111446254 OS=Cucurbita moschata OX=3662 GN=LOC1114462... | [more] |
A0A6J1J2U5 | 1.0e-56 | 66.67 | uncharacterized protein LOC111480766 OS=Cucurbita maxima OX=3661 GN=LOC111480766... | [more] |
A0A5D3DXI0 | 2.3e-56 | 66.10 | Pectinesterase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
A0A1S3CK48 | 2.3e-56 | 66.10 | pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103501854 PE=4 SV=1 | [more] |
A0A0A0L044 | 8.3e-54 | 64.41 | PMEI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G628950 PE=4 S... | [more] |
Match Name | E-value | Identity | Description | |