Sed0017966 (gene) Chayote v1

Overview


Name	Sed0017966
Type	gene
Organism	Sechium edule (Chayote v1)
Description	pathogenesis-related protein PR-1-like
Location	LG08: 3396825 .. 3397632 (+)
RNA-Seq Expression	Sed0017966
Synteny	Sed0017966

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAAGTACCCTCCAAAAACAAAAAACAGCCCAATCAAAAATAAAAAAATAAAAAATGTATGCATATTTTCTCATCCCTATAGCCATTTTCATCCACTTGAGCCCAACCAGCCAAGCCGCCGGAGCTCCGGCGAAGCCCGACAAGGCCCTACAAAATCAATTCCTCGGCCCTCACAATGCAGCCAGATACATCCTCAGATTAGCTCCATTGGCTTGGGACACCAAGTTGGCTCGCTACGCTCAGTCGTACGCCAACAAGCGGCGGGGGGATTGCGCCCTCCGCCACTCGAACGGGCCCTACGGCGAGAACATCTTCTGGGGAAGCGGCAATGCGTGGACACCGGCTCAGGCGGTGGCCGATTGGGTGTCGGAACGGAAATGGTACAGCTACTGGTCGAATTCTTGCGTCGAGGGCGAACTGTGCGGCCACTACACGCAGGTTGTGTGGCGGACGACGCGGCGGATTGGCTGCGCTAGAGTCACCTGTAAAAACGGTAAGGGCGTGTTCATTACTTGCAACTATGATCCTCCCGGTAATTATATTGGAGAGAGACCTTATTAAAATTAATTCGATTTAGTTATAATCTATGGTGTTTGGAGTCTGTGTATATATTTGGAGTGAAATTATTAAAATTTGTTTTGTGAATGTTTATGTTGTTCGTGTCTTTGTCAAATTCACATGTCATTGATTGATTTTATGTGCTGTACCTGTATCCCTATTACGTTTTTTCTTCTTCTCAATGTCCTTTTCATGGAGTGGTGTATATTTTCGTACCCCTCCATATAAATTCTACATTAAATTTTTAC

mRNA sequence

TAAAAAGTACCCTCCAAAAACAAAAAACAGCCCAATCAAAAATAAAAAAATAAAAAATGTATGCATATTTTCTCATCCCTATAGCCATTTTCATCCACTTGAGCCCAACCAGCCAAGCCGCCGGAGCTCCGGCGAAGCCCGACAAGGCCCTACAAAATCAATTCCTCGGCCCTCACAATGCAGCCAGATACATCCTCAGATTAGCTCCATTGGCTTGGGACACCAAGTTGGCTCGCTACGCTCAGTCGTACGCCAACAAGCGGCGGGGGGATTGCGCCCTCCGCCACTCGAACGGGCCCTACGGCGAGAACATCTTCTGGGGAAGCGGCAATGCGTGGACACCGGCTCAGGCGGTGGCCGATTGGGTGTCGGAACGGAAATGGTACAGCTACTGGTCGAATTCTTGCGTCGAGGGCGAACTGTGCGGCCACTACACGCAGGTTGTGTGGCGGACGACGCGGCGGATTGGCTGCGCTAGAGTCACCTGTAAAAACGGTAAGGGCGTGTTCATTACTTGCAACTATGATCCTCCCGGTAATTATATTGGAGAGAGACCTTATTAAAATTAATTCGATTTAGTTATAATCTATGGTGTTTGGAGTCTGTGTATATATTTGGAGTGAAATTATTAAAATTTGTTTTGTGAATGTTTATGTTGTTCGTGTCTTTGTCAAATTCACATGTCATTGATTGATTTTATGTGCTGTACCTGTATCCCTATTACGTTTTTTCTTCTTCTCAATGTCCTTTTCATGGAGTGGTGTATATTTTCGTACCCCTCCATATAAATTCTACATTAAATTTTTAC

Coding sequence (CDS)

ATGTATGCATATTTTCTCATCCCTATAGCCATTTTCATCCACTTGAGCCCAACCAGCCAAGCCGCCGGAGCTCCGGCGAAGCCCGACAAGGCCCTACAAAATCAATTCCTCGGCCCTCACAATGCAGCCAGATACATCCTCAGATTAGCTCCATTGGCTTGGGACACCAAGTTGGCTCGCTACGCTCAGTCGTACGCCAACAAGCGGCGGGGGGATTGCGCCCTCCGCCACTCGAACGGGCCCTACGGCGAGAACATCTTCTGGGGAAGCGGCAATGCGTGGACACCGGCTCAGGCGGTGGCCGATTGGGTGTCGGAACGGAAATGGTACAGCTACTGGTCGAATTCTTGCGTCGAGGGCGAACTGTGCGGCCACTACACGCAGGTTGTGTGGCGGACGACGCGGCGGATTGGCTGCGCTAGAGTCACCTGTAAAAACGGTAAGGGCGTGTTCATTACTTGCAACTATGATCCTCCCGGTAATTATATTGGAGAGAGACCTTATTAA

Protein sequence

MYAYFLIPIAIFIHLSPTSQAAGAPAKPDKALQNQFLGPHNAARYILRLAPLAWDTKLARYAQSYANKRRGDCALRHSNGPYGENIFWGSGNAWTPAQAVADWVSERKWYSYWSNSCVEGELCGHYTQVVWRTTRRIGCARVTCKNGKGVFITCNYDPPGNYIGERPY

Homology

[Close]

BLAST of Sed0017966 vs. NCBI nr
Match: XP_022929438.1 (pathogenesis-related protein PR-1-like [Cucurbita moschata] >XP_023529539.1 pathogenesis-related protein PR-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328.6 bits (841), Expect = 3.2e-86
Identity = 150/168 (89.29%), Postives = 153/168 (91.07%), Query Frame = 0


Query: 1   MYAYFLIPIAIFIHLSPTSQAAGAPAKPDKALQNQFLGPHNAARYILRLAPLAWDTKLAR 60
           M AY LIPIAIFI LS T  A  A  K DKALQ QFLGPHNAARY LRLAPL WDTKLAR
Sbjct: 1   MQAYLLIPIAIFILLSSTGHATAALVKSDKALQKQFLGPHNAARYALRLAPLVWDTKLAR 60

Query: 61  YAQSYANKRRGDCALRHSNGPYGENIFWGSGNAWTPAQAVADWVSERKWYSYWSNSCVEG 120
           YAQSYANKRRGDCALRHSNGPYGENIFWGSGNAW+PAQAVADWVSERKWYSYWSNSCVEG
Sbjct: 61  YAQSYANKRRGDCALRHSNGPYGENIFWGSGNAWSPAQAVADWVSERKWYSYWSNSCVEG 120

Query: 121 ELCGHYTQVVWRTTRRIGCARVTCKNGKGVFITCNYDPPGNYIGERPY 169
           ELCGHYTQ+VWR+TRRIGCARVTCK GKGVFITCNYDPPGNYIGERPY
Sbjct: 121 ELCGHYTQIVWRSTRRIGCARVTCKQGKGVFITCNYDPPGNYIGERPY 168

[Close]

BLAST of Sed0017966 vs. NCBI nr
Match: XP_023001992.1 (pathogenesis-related protein PR-1-like [Cucurbita maxima])

HSP 1 Score: 327.0 bits (837), Expect = 9.4e-86
Identity = 149/168 (88.69%), Postives = 153/168 (91.07%), Query Frame = 0


Query: 1   MYAYFLIPIAIFIHLSPTSQAAGAPAKPDKALQNQFLGPHNAARYILRLAPLAWDTKLAR 60
           M AY LIPIAIFI LS T  A  A  K DKALQ QFLGPHNAARY LRLAPL WDTKLAR
Sbjct: 1   MQAYLLIPIAIFILLSSTGHATAALVKSDKALQKQFLGPHNAARYALRLAPLVWDTKLAR 60

Query: 61  YAQSYANKRRGDCALRHSNGPYGENIFWGSGNAWTPAQAVADWVSERKWYSYWSNSCVEG 120
           YAQSYANKRRGDCALRHSNGPYGENIFWGSGNAW+PAQAVADWVSERKWYSYWSNSCVEG
Sbjct: 61  YAQSYANKRRGDCALRHSNGPYGENIFWGSGNAWSPAQAVADWVSERKWYSYWSNSCVEG 120

Query: 121 ELCGHYTQVVWRTTRRIGCARVTCKNGKGVFITCNYDPPGNYIGERPY 169
           ELCGHYTQ+VWR+TRRIGCARV+CK GKGVFITCNYDPPGNYIGERPY
Sbjct: 121 ELCGHYTQIVWRSTRRIGCARVSCKQGKGVFITCNYDPPGNYIGERPY 168

[Close]

BLAST of Sed0017966 vs. NCBI nr
Match: XP_022988522.1 (pathogenesis-related protein PR-1-like [Cucurbita maxima])

HSP 1 Score: 310.8 bits (795), Expect = 7.0e-81
Identity = 140/169 (82.84%), Postives = 150/169 (88.76%), Query Frame = 0


Query: 1   MYAYFLIPIAIFIH-LSPTSQAAGAPAKPDKALQNQFLGPHNAARYILRLAPLAWDTKLA 60
           M+AY LIPIAI +  LS +  AA AP + D+ LQ QFLGPHNAARY LRLAPL WD KLA
Sbjct: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60

Query: 61  RYAQSYANKRRGDCALRHSNGPYGENIFWGSGNAWTPAQAVADWVSERKWYSYWSNSCVE 120
           RYAQ YANKRRGDCALRHS GPYGENIFWGSGNAW PAQAV+DWVSERKWYSYW+NSCVE
Sbjct: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120

Query: 121 GELCGHYTQVVWRTTRRIGCARVTCKNGKGVFITCNYDPPGNYIGERPY 169
           GELCGHYTQ+VWR+TRRIGCARVTC +GKGVFITCNYDPPGNYIGERPY
Sbjct: 121 GELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGERPY 169

[Close]

BLAST of Sed0017966 vs. NCBI nr
Match: XP_022921796.1 (pathogenesis-related protein PR-1-like [Cucurbita moschata])

HSP 1 Score: 306.2 bits (783), Expect = 1.7e-79
Identity = 139/169 (82.25%), Postives = 149/169 (88.17%), Query Frame = 0


Query: 1   MYAYFLIPIAIFIH-LSPTSQAAGAPAKPDKALQNQFLGPHNAARYILRLAPLAWDTKLA 60
           M+AY LIPIAI +  LS +  AA AP + D+ LQ QFLGPHNAARY LRLAPL WD KLA
Sbjct: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60

Query: 61  RYAQSYANKRRGDCALRHSNGPYGENIFWGSGNAWTPAQAVADWVSERKWYSYWSNSCVE 120
           RYAQ YANKRRGDCALRHS GPYGENIFWGSGNAW PAQAV+DWVSERKWYSYW+NSCVE
Sbjct: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120

Query: 121 GELCGHYTQVVWRTTRRIGCARVTCKNGKGVFITCNYDPPGNYIGERPY 169
           GEL GHYTQ+VWR+TRRIGCARVTC +GKGVFITCNYDPPGNYIGERPY
Sbjct: 121 GELRGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGERPY 169

[Close]

BLAST of Sed0017966 vs. NCBI nr
Match: XP_023516778.1 (pathogenesis-related protein PR-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 305.8 bits (782), Expect = 2.2e-79
Identity = 139/169 (82.25%), Postives = 147/169 (86.98%), Query Frame = 0


Query: 1   MYAYFLIPIAIFIH-LSPTSQAAGAPAKPDKALQNQFLGPHNAARYILRLAPLAWDTKLA 60
           M+AY LIPIAI +  LS    AA A  + D+ LQ QFLGPHNAARY LRLAPL WD KLA
Sbjct: 1   MHAYLLIPIAIILTLLSSIGLAAAASVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60

Query: 61  RYAQSYANKRRGDCALRHSNGPYGENIFWGSGNAWTPAQAVADWVSERKWYSYWSNSCVE 120
           RYAQ YANKRRGDCALRHS GPYGENIFWGSGN W PAQAV+DWVSERKWYSYW+NSCVE
Sbjct: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNTWNPAQAVSDWVSERKWYSYWANSCVE 120

Query: 121 GELCGHYTQVVWRTTRRIGCARVTCKNGKGVFITCNYDPPGNYIGERPY 169
           GELCGHYTQ+VWRTTRRIGCARVTC +GKGVFITCNYDPPGNYIGERPY
Sbjct: 121 GELCGHYTQIVWRTTRRIGCARVTCYDGKGVFITCNYDPPGNYIGERPY 169

[Close]

BLAST of Sed0017966 vs. ExPASy Swiss-Prot
Match: Q40374 (Pathogenesis-related protein PR-1 OS=Medicago truncatula OX=3880 GN=PR-1 PE=2 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.7e-58
Identity = 99/167 (59.28%), Postives = 121/167 (72.46%), Query Frame = 0


Query: 2   YAYFLIPIAIFIHLSPTSQAAGAPAKPDKALQNQFLGPHNAARYILRLAPLAWDTKLARY 61
           +A FL+ +    H+S  S      +   ++ +NQFL P N AR  + L PL WD KL  Y
Sbjct: 8   FALFLLLLTFISHVS-ASYIPNKKSFKSRSFKNQFLIPQNIARAAVGLRPLVWDDKLTHY 67

Query: 62  AQSYANKRRGDCALRHSNGPYGENIFWGSGNAWTPAQAVADWVSERKWYSYWSNSCVEGE 121
           AQ YAN+RR DCAL HSNGPYGENIFWGSG  W PAQAV+ WV E+++Y+YW NSCV+GE
Sbjct: 68  AQWYANQRRNDCALEHSNGPYGENIFWGSGVGWNPAQAVSAWVDEKQFYNYWHNSCVDGE 127

Query: 122 LCGHYTQVVWRTTRRIGCARVTCKNGKGVFITCNYDPPGNYIGERPY 169
           +CGHYTQVVW +T ++GCA V C + KG F+TCNYDPPGNY GERPY
Sbjct: 128 MCGHYTQVVWGSTTKVGCASVVCSDDKGTFMTCNYDPPGNYYGERPY 173

[Close]

BLAST of Sed0017966 vs. ExPASy Swiss-Prot
Match: P35792 (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 4.0e-47
Identity = 85/164 (51.83%), Postives = 112/164 (68.29%), Query Frame = 0


Query: 6   LIPIAIFIHLSPTSQAAGAPAKPDKALQNQFLGPHNAARYILRLAPLAWDTKLARYAQSY 65
           L+ +A+   +   SQA  +P          ++ PHNAAR  + +  ++W TKL  +AQ+Y
Sbjct: 9   LLALAMAAAMVNLSQAQNSP--------QDYVSPHNAARSAVGVGAVSWSTKLQAFAQNY 68

Query: 66  ANKRRGDCALRHSNGPYGENIFWGSGNA-WTPAQAVADWVSERKWYSYWSNSCVEGELCG 125
           AN+R  DC L+HS GPYGENIFWGS  A W  A AV  WV+E+K Y+Y SN+C  G++CG
Sbjct: 69  ANQRINDCKLQHSGGPYGENIFWGSAGADWKAADAVNSWVNEKKDYNYGSNTCAAGKVCG 128

Query: 126 HYTQVVWRTTRRIGCARVTCKNGKGVFITCNYDPPGNYIGERPY 169
           HYTQVVWR +  IGCARV C N +GVFITCNY+P GN +G++PY
Sbjct: 129 HYTQVVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

[Close]

BLAST of Sed0017966 vs. ExPASy Swiss-Prot
Match: Q05968 (Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 4.0e-47
Identity = 86/164 (52.44%), Postives = 111/164 (67.68%), Query Frame = 0


Query: 6   LIPIAIFIHLSPTSQAAGAPAKPDKALQNQFLGPHNAARYILRLAPLAWDTKLARYAQSY 65
           L+ +A+   +   SQA  +P          ++ PHNAAR  + +  ++W TKL  +AQ+Y
Sbjct: 9   LLALAMAAAMVNLSQAQNSP--------QDYVSPHNAARSAVGVGAVSWSTKLQAFAQNY 68

Query: 66  ANKRRGDCALRHSNGPYGENIFWGSGNA-WTPAQAVADWVSERKWYSYWSNSCVEGELCG 125
           AN+R  DC L+HS GPYGENIFWGS  A W  + AV  WVSE+K Y Y SN+C  G++CG
Sbjct: 69  ANQRINDCKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCG 128

Query: 126 HYTQVVWRTTRRIGCARVTCKNGKGVFITCNYDPPGNYIGERPY 169
           HYTQVVWR +  IGCARV C N +GVFITCNY+P GN IG++PY
Sbjct: 129 HYTQVVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIIGQKPY 164

[Close]

BLAST of Sed0017966 vs. ExPASy Swiss-Prot
Match: P35793 (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 5.2e-47
Identity = 85/164 (51.83%), Postives = 111/164 (67.68%), Query Frame = 0


Query: 6   LIPIAIFIHLSPTSQAAGAPAKPDKALQNQFLGPHNAARYILRLAPLAWDTKLARYAQSY 65
           L+ +A+   +   SQA  +P          ++ PHNAAR  + +  ++W TKL  +AQ+Y
Sbjct: 9   LLALAMSAAMVNLSQAQNSP--------QDYVSPHNAARAAVGVGAVSWSTKLQAFAQNY 68

Query: 66  ANKRRGDCALRHSNGPYGENIFWGSGNA-WTPAQAVADWVSERKWYSYWSNSCVEGELCG 125
           AN+R  DC L+HS GPYGENIFWGS  A W  + AV  WVSE+K Y Y SN+C  G++CG
Sbjct: 69  ANQRINDCKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCG 128

Query: 126 HYTQVVWRTTRRIGCARVTCKNGKGVFITCNYDPPGNYIGERPY 169
           HYTQVVWR +  IGCARV C N +GVFITCNY+P GN +G++PY
Sbjct: 129 HYTQVVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

[Close]

BLAST of Sed0017966 vs. ExPASy Swiss-Prot
Match: Q00008 (Pathogenesis-related protein PRMS OS=Zea mays OX=4577 GN=PRMS PE=2 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 4.9e-45
Identity = 76/134 (56.72%), Postives = 97/134 (72.39%), Query Frame = 0


Query: 36  FLGPHNAARYILRLAPLAWDTKLARYAQSYANKRRGDCALRHSNGPYGENIFWGS-GNAW 95
           +L P N+AR  + + P+ W TKL ++A+ YA +R GDC L+HS GPYGENIFWGS G  W
Sbjct: 34  YLTPQNSARAAVGVGPVTWSTKLQQFAEKYAAQRAGDCRLQHSGGPYGENIFWGSAGFDW 93

Query: 96  TPAQAVADWVSERKWYSYWSNSCVEGELCGHYTQVVWRTTRRIGCARVTCKNGKGVFITC 155
               AV  WV E++WY+Y +NSC  G++CGHYTQVVWR T  IGCARV C++ +GVFI C
Sbjct: 94  KAVDAVRSWVDEKQWYNYATNSCAAGKVCGHYTQVVWRATTSIGCARVVCRDNRGVFIIC 153

Query: 156 NYDPPGNYIGERPY 169
           NY+P GN  G +PY
Sbjct: 154 NYEPRGNIAGMKPY 167

[Close]

BLAST of Sed0017966 vs. ExPASy TrEMBL
Match: A0A6J1ES44 (pathogenesis-related protein PR-1-like OS=Cucurbita moschata OX=3662 GN=LOC111436010 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.6e-86
Identity = 150/168 (89.29%), Postives = 153/168 (91.07%), Query Frame = 0


Query: 1   MYAYFLIPIAIFIHLSPTSQAAGAPAKPDKALQNQFLGPHNAARYILRLAPLAWDTKLAR 60
           M AY LIPIAIFI LS T  A  A  K DKALQ QFLGPHNAARY LRLAPL WDTKLAR
Sbjct: 1   MQAYLLIPIAIFILLSSTGHATAALVKSDKALQKQFLGPHNAARYALRLAPLVWDTKLAR 60

Query: 61  YAQSYANKRRGDCALRHSNGPYGENIFWGSGNAWTPAQAVADWVSERKWYSYWSNSCVEG 120
           YAQSYANKRRGDCALRHSNGPYGENIFWGSGNAW+PAQAVADWVSERKWYSYWSNSCVEG
Sbjct: 61  YAQSYANKRRGDCALRHSNGPYGENIFWGSGNAWSPAQAVADWVSERKWYSYWSNSCVEG 120

Query: 121 ELCGHYTQVVWRTTRRIGCARVTCKNGKGVFITCNYDPPGNYIGERPY 169
           ELCGHYTQ+VWR+TRRIGCARVTCK GKGVFITCNYDPPGNYIGERPY
Sbjct: 121 ELCGHYTQIVWRSTRRIGCARVTCKQGKGVFITCNYDPPGNYIGERPY 168

[Close]

BLAST of Sed0017966 vs. ExPASy TrEMBL
Match: A0A6J1KI73 (pathogenesis-related protein PR-1-like OS=Cucurbita maxima OX=3661 GN=LOC111496008 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 4.6e-86
Identity = 149/168 (88.69%), Postives = 153/168 (91.07%), Query Frame = 0


Query: 1   MYAYFLIPIAIFIHLSPTSQAAGAPAKPDKALQNQFLGPHNAARYILRLAPLAWDTKLAR 60
           M AY LIPIAIFI LS T  A  A  K DKALQ QFLGPHNAARY LRLAPL WDTKLAR
Sbjct: 1   MQAYLLIPIAIFILLSSTGHATAALVKSDKALQKQFLGPHNAARYALRLAPLVWDTKLAR 60

Query: 61  YAQSYANKRRGDCALRHSNGPYGENIFWGSGNAWTPAQAVADWVSERKWYSYWSNSCVEG 120
           YAQSYANKRRGDCALRHSNGPYGENIFWGSGNAW+PAQAVADWVSERKWYSYWSNSCVEG
Sbjct: 61  YAQSYANKRRGDCALRHSNGPYGENIFWGSGNAWSPAQAVADWVSERKWYSYWSNSCVEG 120

Query: 121 ELCGHYTQVVWRTTRRIGCARVTCKNGKGVFITCNYDPPGNYIGERPY 169
           ELCGHYTQ+VWR+TRRIGCARV+CK GKGVFITCNYDPPGNYIGERPY
Sbjct: 121 ELCGHYTQIVWRSTRRIGCARVSCKQGKGVFITCNYDPPGNYIGERPY 168

[Close]

BLAST of Sed0017966 vs. ExPASy TrEMBL
Match: A0A6J1JD89 (pathogenesis-related protein PR-1-like OS=Cucurbita maxima OX=3661 GN=LOC111485737 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.4e-81
Identity = 140/169 (82.84%), Postives = 150/169 (88.76%), Query Frame = 0


Query: 1   MYAYFLIPIAIFIH-LSPTSQAAGAPAKPDKALQNQFLGPHNAARYILRLAPLAWDTKLA 60
           M+AY LIPIAI +  LS +  AA AP + D+ LQ QFLGPHNAARY LRLAPL WD KLA
Sbjct: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60

Query: 61  RYAQSYANKRRGDCALRHSNGPYGENIFWGSGNAWTPAQAVADWVSERKWYSYWSNSCVE 120
           RYAQ YANKRRGDCALRHS GPYGENIFWGSGNAW PAQAV+DWVSERKWYSYW+NSCVE
Sbjct: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120

Query: 121 GELCGHYTQVVWRTTRRIGCARVTCKNGKGVFITCNYDPPGNYIGERPY 169
           GELCGHYTQ+VWR+TRRIGCARVTC +GKGVFITCNYDPPGNYIGERPY
Sbjct: 121 GELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGERPY 169

[Close]

BLAST of Sed0017966 vs. ExPASy TrEMBL
Match: A0A6J1E2D3 (pathogenesis-related protein PR-1-like OS=Cucurbita moschata OX=3662 GN=LOC111429942 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 8.3e-80
Identity = 139/169 (82.25%), Postives = 149/169 (88.17%), Query Frame = 0


Query: 1   MYAYFLIPIAIFIH-LSPTSQAAGAPAKPDKALQNQFLGPHNAARYILRLAPLAWDTKLA 60
           M+AY LIPIAI +  LS +  AA AP + D+ LQ QFLGPHNAARY LRLAPL WD KLA
Sbjct: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60

Query: 61  RYAQSYANKRRGDCALRHSNGPYGENIFWGSGNAWTPAQAVADWVSERKWYSYWSNSCVE 120
           RYAQ YANKRRGDCALRHS GPYGENIFWGSGNAW PAQAV+DWVSERKWYSYW+NSCVE
Sbjct: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120

Query: 121 GELCGHYTQVVWRTTRRIGCARVTCKNGKGVFITCNYDPPGNYIGERPY 169
           GEL GHYTQ+VWR+TRRIGCARVTC +GKGVFITCNYDPPGNYIGERPY
Sbjct: 121 GELRGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGERPY 169

[Close]

BLAST of Sed0017966 vs. ExPASy TrEMBL
Match: A0A6J1C296 (pathogenesis-related protein PR-1-like OS=Momordica charantia OX=3673 GN=LOC111007284 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.9e-79
Identity = 138/164 (84.15%), Postives = 147/164 (89.63%), Query Frame = 0


Query: 6   LIPIAIFIHLSPT-SQAAGAPAKPDKALQNQFLGPHNAARYILRLAPLAWDTKLARYAQS 65
           +IPIAI + LS + S  A APA+ D+ALQ QFL PHNAARY LRLAPL WD KLARYAQS
Sbjct: 6   VIPIAILVLLSSSGSSGAAAPARNDRALQKQFLAPHNAARYALRLAPLVWDAKLARYAQS 65

Query: 66  YANKRRGDCALRHSNGPYGENIFWGSGNAWTPAQAVADWVSERKWYSYWSNSCVEGELCG 125
           YANKRRGDCALRHS GPYGENIFWGSGNAWTPAQAVADWVSER+WYSYW+NSCVEGELCG
Sbjct: 66  YANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVADWVSERQWYSYWANSCVEGELCG 125

Query: 126 HYTQVVWRTTRRIGCARVTCKNGKGVFITCNYDPPGNYIGERPY 169
           HYTQ+VWR+TRRIGCARVTC  G GVFITCNYDPPGNYIGERPY
Sbjct: 126 HYTQIVWRSTRRIGCARVTCNAGGGVFITCNYDPPGNYIGERPY 169

[Close]

BLAST of Sed0017966 vs. TAIR 10
Match: AT4G30320.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 216.5 bits (550), Expect = 1.7e-56
Identity = 92/136 (67.65%), Postives = 109/136 (80.15%), Query Frame = 0


Query: 33  QNQFLGPHNAARYILRLAPLAWDTKLARYAQSYANKRRGDCALRHSNGPYGENIFWGSGN 92
           Q QF+GP NAAR  LRL PL WD KLARYAQ +AN+RRGDCAL HSNGPYGEN+FWGSGN
Sbjct: 27  QEQFMGPQNAARAHLRLKPLKWDAKLARYAQWWANQRRGDCALTHSNGPYGENLFWGSGN 86

Query: 93  AWTPAQAVADWVSERKWYSYWSNSCVEGELCGHYTQVVWRTTRRIGCARVTCKNGKGVFI 152
            W P+QA   W+SE + Y+Y SNSC   E+CGHYTQ+VW+ T++IGCA V C  G GVF+
Sbjct: 87  RWGPSQAAYGWLSEARSYNYRSNSC-NSEMCGHYTQIVWKNTQKIGCAHVICNGGGGVFL 146

Query: 153 TCNYDPPGNYIGERPY 169
           TCNYDPPGN++G +PY
Sbjct: 147 TCNYDPPGNFLGRKPY 161

[Close]

BLAST of Sed0017966 vs. TAIR 10
Match: AT5G57625.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 204.9 bits (520), Expect = 5.0e-53
Identity = 88/152 (57.89%), Postives = 110/152 (72.37%), Query Frame = 0


Query: 17  PTSQAAGAPAKPDKALQNQFLGPHNAARYILRLAPLAWDTKLARYAQSYANKRRGDCALR 76
           P  +    P+ P  ++   FL PHNA R  L L PL WD KLA YA  +AN+RR DC+L 
Sbjct: 56  PVYRPPTTPSLPAGSIARLFLDPHNALRSGLGLPPLIWDGKLASYATWWANQRRYDCSLT 115

Query: 77  HSNGPYGENIFWGSGNAWTPAQAVADWVSERKWYSYWSNSCVEGELCGHYTQVVWRTTRR 136
           HS GPYGEN+FWGSG++W P  AV  W+ E + Y++ +NSC    +CGHYTQ+VWR T+R
Sbjct: 116 HSTGPYGENLFWGSGSSWAPGFAVQSWIVEGRSYNHNTNSCDGSGMCGHYTQMVWRDTKR 175

Query: 137 IGCARVTCKNGKGVFITCNYDPPGNYIGERPY 169
           +GCARV C+NG GVFITCNYDPPGNY+GE+PY
Sbjct: 176 LGCARVVCENGAGVFITCNYDPPGNYVGEKPY 207

[Close]

BLAST of Sed0017966 vs. TAIR 10
Match: AT4G25790.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 200.3 bits (508), Expect = 1.2e-51
Identity = 85/141 (60.28%), Postives = 104/141 (73.76%), Query Frame = 0


Query: 28  PDKALQNQFLGPHNAARYILRLAPLAWDTKLARYAQSYANKRRGDCALRHSNGPYGENIF 87
           P  + + QFL PHN  R  L L PL WD K+A YA  +AN+RR DC+L HS GPYGEN+F
Sbjct: 70  PTGSFEQQFLDPHNTVRGGLGLPPLVWDVKIASYATWWANQRRYDCSLTHSTGPYGENLF 129

Query: 88  WGSGNAWTPAQAVADWVSERKWYSYWSNSCVEGELCGHYTQVVWRTTRRIGCARVTCKNG 147
           WGSG+ +T   AV  W  E K Y++ +N+C    +CGHYTQ+VWR TRR+GCARV C+NG
Sbjct: 130 WGSGSDFTSTFAVESWTVEAKSYNHMTNTCEGDGMCGHYTQIVWRETRRLGCARVVCENG 189

Query: 148 KGVFITCNYDPPGNYIGERPY 169
            GVFITCNYDPPGNY+GE+PY
Sbjct: 190 AGVFITCNYDPPGNYVGEKPY 210

[Close]

BLAST of Sed0017966 vs. TAIR 10
Match: AT4G25780.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 190.7 bits (483), Expect = 9.8e-49
Identity = 84/138 (60.87%), Postives = 104/138 (75.36%), Query Frame = 0


Query: 35  QFLGPHNAARYILRLAPLAWDTKLARYAQSYANKRRGDCALRH--SNGPY--GENIFWGS 94
           QFL  HN  R      PL WD +L  YAQ +AN+RRGDCALRH  SNG +  GENI+WG 
Sbjct: 54  QFLFRHNLVRAARFEPPLIWDRRLQNYAQGWANQRRGDCALRHSVSNGEFNLGENIYWGY 113

Query: 95  GNAWTPAQAVADWVSERKWYSYWSNSCVEGELCGHYTQVVWRTTRRIGCARVTCKNGKGV 154
           G  W+PA AV  W SE+++Y Y SN+C  G++CGHYTQ+VW++TRR+GCARV C NG G+
Sbjct: 114 GANWSPADAVVAWASEKRFYHYGSNTCDAGQMCGHYTQIVWKSTRRVGCARVVCDNG-GI 173

Query: 155 FITCNYDPPGNYIGERPY 169
           F+TCNYDPPGNYIG++PY
Sbjct: 174 FMTCNYDPPGNYIGQKPY 190

[Close]

BLAST of Sed0017966 vs. TAIR 10
Match: AT4G31470.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 171.4 bits (433), Expect = 6.2e-43
Identity = 81/145 (55.86%), Postives = 92/145 (63.45%), Query Frame = 0


Query: 29  DKAL-----QNQFLGPHNAARYILRLAPLAWDTKLARYAQSYANKRRGDCALRHSNGPYG 88
           DKAL     Q QFL PHN  R  LRL PL W   LA YA  +A  RRGDC L HS GPYG
Sbjct: 42  DKALARNTIQQQFLRPHNILRAKLRLPPLKWSNSLALYASRWARTRRGDCKLIHSGGPYG 101

Query: 89  ENIFWGSGNAWTPAQAVADWVSERKWYSYWSNSCVEGELCGHYTQVVWRTTRRIGCARVT 148
           EN+FWGSG  WTP  AVA W SE K+Y   ++ C     C HYTQ+VW+ + RIGCA   
Sbjct: 102 ENLFWGSGKGWTPRDAVAAWASEMKYYDRRTSHCKANGDCLHYTQLVWKKSSRIGCAISF 161

Query: 149 CKNGKGVFITCNYDPPGNYIGERPY 169
           CK G   FI CNYDPPGN +G+ P+
Sbjct: 162 CKTG-DTFIICNYDPPGNIVGQPPF 185

The following BLAST results are available for this feature:

BLAST of Sed0017966 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929438.1	3.2e-86	89.29	pathogenesis-related protein PR-1-like [Cucurbita moschata] >XP_023529539.1 path...	[more]
XP_023001992.1	9.4e-86	88.69	pathogenesis-related protein PR-1-like [Cucurbita maxima]	[more]
XP_022988522.1	7.0e-81	82.84	pathogenesis-related protein PR-1-like [Cucurbita maxima]	[more]
XP_022921796.1	1.7e-79	82.25	pathogenesis-related protein PR-1-like [Cucurbita moschata]	[more]
XP_023516778.1	2.2e-79	82.25	pathogenesis-related protein PR-1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0017966 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40374	1.7e-58	59.28	Pathogenesis-related protein PR-1 OS=Medicago truncatula OX=3880 GN=PR-1 PE=2 SV...	[more]
P35792	4.0e-47	51.83	Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
Q05968	4.0e-47	52.44	Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
P35793	5.2e-47	51.83	Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
Q00008	4.9e-45	56.72	Pathogenesis-related protein PRMS OS=Zea mays OX=4577 GN=PRMS PE=2 SV=1	[more]

BLAST of Sed0017966 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ES44	1.6e-86	89.29	pathogenesis-related protein PR-1-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1KI73	4.6e-86	88.69	pathogenesis-related protein PR-1-like OS=Cucurbita maxima OX=3661 GN=LOC1114960...	[more]
A0A6J1JD89	3.4e-81	82.84	pathogenesis-related protein PR-1-like OS=Cucurbita maxima OX=3661 GN=LOC1114857...	[more]
A0A6J1E2D3	8.3e-80	82.25	pathogenesis-related protein PR-1-like OS=Cucurbita moschata OX=3662 GN=LOC11142...	[more]
A0A6J1C296	1.9e-79	84.15	pathogenesis-related protein PR-1-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Sed0017966 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30320.1	1.7e-56	67.65	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT5G57625.1	5.0e-53	57.89	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT4G25790.1	1.2e-51	60.28	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT4G25780.1	9.8e-49	60.87	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT4G31470.1	6.2e-43	55.86	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 151..164 score: 55.56 coord: 52..70 score: 41.44 coord: 99..112 score: 37.14 coord: 123..139 score: 64.33
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 20..168
IPR002413	Venom allergen 5-like	PRINTS	PR00838	V5ALLERGEN	coord: 97..112 score: 26.95 coord: 122..141 score: 54.38 coord: 52..70 score: 41.78
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 31..164 e-value: 6.5E-57 score: 205.1
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 39..156 e-value: 1.0E-22 score: 81.3
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 31..168 e-value: 5.4E-44 score: 151.8
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 26..168
None	No IPR available	PANTHER	PTHR10334:SF489	CYSTEINE-RICH SECRETORY PROTEIN, ALLERGEN V5/TPX-1-RELATED PROTEIN-RELATED	coord: 20..168
None	No IPR available	CDD	cd05381	CAP_PR-1	coord: 33..168 e-value: 4.53001E-88 score: 251.784
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 151..162
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 124..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017966.1	Sed0017966.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005615	extracellular space
cellular_component	GO:0005576	extracellular region