Sed0017951 (gene) Chayote v1

Overview


Name	Sed0017951
Type	gene
Organism	Sechium edule (Chayote v1)
Description	rhomboid-like protein 20
Location	LG02: 46306363 .. 46313665 (-)
RNA-Seq Expression	Sed0017951
Synteny	Sed0017951

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTCGGTTTTTAAAAAACGGGAAAAGATCTGAAAAAATAGAGAAGAGAAATAGTTGTTCAGAACCAAAAGAGGAAGAGATAAATCGAATTTCCAGTCCAAAGCTTCCAACACACAACACAACAAATCAACAATCAAACAAACAAACAAAAACCCTCCGGCCGCCTGAGAAGATCGCCGTTGCTTCTTCTCCGACGCCATGAACGGCGGCGGCCCGTCTGGTTTCAGTGCGTCCTCTTCAATTTCTCTCTTCCCTTTCAATTTCTTCTTTCAACCCTTTGATCCATTTTTCGCTTTGTGCTTTTCTCGTTCGCAGACAATGCCCCCGTCACCCGGACCTTCATCATCGCCTCCGCTCTTTTCGCCGTCTTCTTCGGGATCCAAGGCCGCTCAGCTAAGCTTGGCCTGTCCTATCAGGTACTCGTATTTCTGTTTCGATTGCGTTTCGGACTAGATTGGATTTGCCTTTTCGGCTTGTTGTTTTGTTGAGTGTTTGGCTTGATTGACCATCGATTTCGGGATGTATTGTGTTGAGTATGGTTGTTGCGGGAAATTACCCTTTCAATCAACCCAGGATTGTAAATCGACTCGGCCGAGTTAATCTTAATTGAAAGTGGGGATTATCTTTTCATCATGTATGTAGTGACTTAGTTTAATCGACCTTATGGGCTTCTGCACTTTTGCTGAGATATTTAGGTGACCCCATTGGGAGGTAATCCAAGGTCGATAACATTTTTGGGAGCCTTGTAGATGTATTATTTTGGGTAGAATTTAATTGAGGATTAGCTCTAAGTTGTGAAAAGAAGGACGATTTTGGTGCATTTCTGAATTAAGTCATCGAATGAGACATTGAGATGCGATATTTTGGGAAAATGGGCAACTCTTGAATGACCCTTTTACTGTGTTATTCTGCGTTGCTGTAAAAATTGGAGGTTGGATTATGGATTTTTAGGATTTGGAGACAAGAAGCTGAAGATTGTACACTAAAGGAGCTTAATACTTGCCACTTGGTTGGTTCTTCATGCGAGATTAACACCTTAGTTAGAGTTTTTAGGAAGTCTTCTCCTTTGTGGGGCCGACGCGTTGTATCTTATGTAGGACGGTAGGAGGGCACATAGGAACTTGACCAGTTGCTTTGGAAGTGGGAGATGGCTTTCAAGGCGTGAAACCAATTTTTTGAAGATTTTGTGAGACCAAGAGATTGTAGTGGAATGATCAGAGAGTTTCTTGTTACTCCTCCCTTTTGCGAGAAGGGTTTTTTGTGGAAAGGGCGGGTGTGTGATATTTTGTGGTGTCTTTCAAGGGAGAGAAATAATAGAATCGGTAGAGGGGTTGAGAGATATTTGTAAGATGTTTGGACGTTTATTAGATTATATTATATGTTTTTATCTTTTGACTTCTATTTCTAAGATCTTTTGTAGTTATATATGGGTGTGGTTTTACTTGACTGGAGATATTTTTTGTAGGTGGCCTACCTTGTGTTTATTTTGTGGGGTTTTTTTGTATGTCCTTTCATTCATTTCTTAATGAAACCTTGGGTTATTATAAAAATTAAACTAGGTCAAATAAGGTGGCTAAAGGGATCCACTTATAGTAATATTTTTTTTTATAATGCATATTTGTTGCATATAATCCTATTATATAGGACTTAAGTTAACTTATTTTTTCCCTTTTCTATAGTAAAGATTACCCCTGAATTGGTATGGTAGGAAGGACACTTACCAGTTGATTATCATCCTTATGGCAGGATGTGATTGTGAAGCTTCGCTTTTGGAAGTTAGTAATGTCAGTTTTTGCCTTTTCATCTACTCCTGAATTAATGTCCGGACTGTTTCTGCTTTATTACTTCAGAGTATTTGAGAGACAGATAGGTTCCAACAAATATTCGGTAAGTTTTATTCAATTCATGCTGCAGGATTTTATTAGAATGAAGCAACAGGTCATTATCTTTAAATGGATGGATCTCATTCATACAAAGCAGTGCTTGATGTATTAGCTCTTGTAATCGTATATTGTATATTTTCAAATGTAGATAATAGAAGCATAAAAAATGTACAAAAGTAGAAATCATAGTCAAGGAAACACGTTGATTTTGACAAAGTATCTGTGTCAGACACATGCCCAGATACTTTCGGACTAGGGGTGATTTCGGTTCGGTTTTTGTCGGTTTTGTCCCAATCCGACAACCGAACCGATATCTTCGGTTTTAAAAAAATTGATCCGATCCAATGTCCAGTAAAGCATAGAACCATTGGATCGGTTTTTAATTGGTTCGGTTTTCAATAGATCCGATCCAATGTCCAATAAAGTATAACCATCGAAAAACTAAAGACAAGGAAAAAAAACGACATCCGTTGAAGTGGACTGTTACTTCTACTTTTGAGACATAACTACAAAGACTCAGCCAAAGATGGTTTTTAAAGAGATAATTCTAATTCTAATGCCAACTATGAATTTTATAGATCCAAAAAATACCTCTAATCTAATTTTAATTCTAATTGTAATTCTCAGCAAGGAGGAAGCTTAGTTCTAAAAGCTATTCAGTATGAATTATTCATATATGTATCATTAAAATACCTCTAATCTCACCATTAAATTAGAAGTTGAATGGCATATAAACAAAATAATAAAGGGCTTAGTGAAAAATGAGTACAGTAGCCATCACACATAACCATCAAACTAACTCCATCAGAATCAAAATGGATGTCAAATTGAAGGGATTAATCAAATGAGGTTTCAGTAGTTTGACTATTAAAAACAAAATACAGGTGGAAAAAAAACCCAATAATCAAATTTGACGACCTCTGACAAAACAAAAAATTCATATCCCAAAATCAAATAAGCCAATAGATTAGGGTCTATTTGACTCGAAACATTACTATTGATTGAAAAGCAAATGACACCAAACGAGCTTATCTCGCCATTAATGGAGGAATTTAAGACAATAAAGAGAAATAGAGAAGAGTACCGGCGATTCCAACTGCATCTCTGCACAACGAATCGATTGATTGAAGGGAAACGACGTTGGAGAAGGGAAATGACGCTCACGAATTTGGGGATCAAAAGAAGGGAACGACGGAAATTTGAGAAGGGAAACGACAGAAATTTGAGAAGGGAAAAGGCGCTGAGAGTGGAGAGAAAAAAGACGCGTGAAAAGGAGATTATGAGTTAGGGTTTTACTTTTTTAATTATTTATAATATTGGTTCGGTTCGGTTTTTTATCGGTTTTTTCAAAAGAAACCGAACCAAACTGAAAAACTTCGGTTTATTGCCATTTGAAACCGATGGGTCCACTCCTCTTCTAAAAAACCGAACCGATCCATTGGATCGATTCGGTTCGATTCGATTCAGTCGGTTTTCGGTTTTTCTTTTCACCCCTATTTCGGACTGTTGAATTATGTTAAACCACCAATCAATCAAAAAGTCTAAGCTGATGGATTTGGGTAAATTTAATTATATCAACCAACACTCCCCCTCACTTGTGGGCTTTGAAATTTAAGAAATGCCTTATAAGTGGAATTTAATTTTAATTGGGGAGGAAACGACTTGGCAAAGATTCGAACTCACGACCTCCTACTCTGATACCATATTGAATTATGTCAAACCACCAATCAATCCAAAAGCCTAAGTTGATGGATTGAGGTAAATTTAATTATATCAACCAACACGGACACTCCCCAAACACATGAAATTCAATGTCTTCTTTTATTATTATTATTTTTAGTTTCAGATACACCATTTAAAACTTATACCTTTCAACTCCCATAGGAAAATGTTGATTTTTTTGGGTAAACATCTTTCCAAAGCGCCATATAGAGACTAGCACCCCTTCCATCATCAATTTCAACCAAACTTGATAAAAAGGATGCAACTGATAAGCAATTATTAGGTTCTAACGGCCAACACCAGGAATCTTGGGAATCCTGTGGTGTAAAACGGTCTAATAAGTTAGAAAGAATTGCCCATTCTATTGCCTCGAGGTCATTTGGATTGCGTCTAAATCTCAAGTTCAGGCACTCGAGACGTGGTTTCGCACCTCATAAATAGTAAGATCATGGAAATTAGTAAGGTGAAACAGGTGTGGGAAGGAAATATGTAGCACCCCACATGGTAGCCAAGACTCCAACCAGAAACAAGTAGATTCACCATTCCCCACTCGACGAGTGATCCGTTCTCTTTCTTATATTGTCCTATAACTCTAGAGAAGGGGGAACGTGACATGCATTTGGAATGCAAAAAATAGTATCAAAGTACTACTATGCCCCTACTAATGACATGCTAATATTCCCAGCATATCCCTTGCTAGTACTCTCACAACATTTTTGCGGTCATTGACATGAAGAAGTAGCTGTATATTTGAGACAGTTTATTCTTTATTTCAATCTCTTCATAGAATAAGGTTGGTAGACTGAAATTTAGTATGCCCATCGTCTTTAGTTTTCATTCTAGAAAACAGATAAAATTGTCTCCTTTTTTTGTAAGCTATTTCTTTTTGTATGCCCGTGTGTTATTTTCTTCTTTTCTCAATGAAAAATTGTTTTAGTATCAAACTCCTTGTTTGGGGAAAGTAGTTGAGGTGCACTTAAGCTTACTTGGACACTCACAGATGTAAAAAATAAATTAAAACTTGGTTTATTATAAAAATAAACATTTTTTTCCCTTAGTTGATATGTTTTTTTTTCTTAAATAGATCTATATTAATAATTTGTTGTGATGCAGGTCTTTATCTTGTTCTCTATAATAACCTCCTTACTTTTTGAGGTCCTTGCAATATCATTACTTAAAGGTATGCATTTTGGTTCAATCTACTAATAGGAGAGCCTTTATGGTTTTGGATAGGAAGTGGATCGGATTTGGGGTTTGGTGTGTTTTAATGCATTTCTTTTGGGTGCATAAACAGAGTCTCTTTTGAATTCTAGACCGTAGTCGTACAACTTATATAGAAGTAAGAAGAAATTGAATTTCTTCAAATTTCTTAAATACCCTATGCCATGGTGCTAACATATCTTTTAGTGAAAAAAAATCAAGCATTTAGGGTAAGTGCTGACCAATTTATGAAACGGTTTCCATTTTTTGATCGACAATTCACAAAATAACCAGATCACAAGTAACAGATGAATAAGCCTTGCCTAGGATAAGATGTTTATTTAGTTTGTATCTAATTTTAACTATTTCATCATTTTCTCATTCGACATCACTAACATCAGGAATTAATTTGTTATAGAAGTTCGGTATAAAAAACAATATAGCGGATTGGTGGTCAGATTTCTGAGTTTGCTCATTACATTTTGTTAACATTGAGTTTATTTTTGTTGTATCTTATTCTAAGATTCAGAATAAAACTATAAATTTCACCCATTCATAGAAGTTCTGTATGAAAAATAACTATAGTGGATTTATTTTTGTTGTCTCTTTTTTTCTCTCAGATTTCAGGATTAGAATCTTGTGGGGAAAATATATTTTATCCCCAGAAGCTATGTTCAGATTTTCACTTGTCTAACACTTGTCTCTCTTTTTGAGCAGATCCTGCAGCAAATCTAGTCACTTCTGGACCTTATGGTCTTTTATTTGCTTCCTTTGTACCGTTCTTTTTTGATATCCCCGTTTCAACTTGGTTCAGTGTATTTGGAGTTCGTTTCTCTGACAAGTCTTTCATATATCTGGCTGGTCTTCAGGTTAAGAGTGACTATTTTTATTTATACTTGTTTTGATACCTGCTTTGCTTTCTCTAGCCGTATAATCTAGTGTTATTATTGATCTTGCAGCTCCTCCTATCCTCGTGGAGAAGATCCATCTTACCAGGAATATGCGGCATTCTTGCTGGTTCCTTATATCGTTTGAATGTATTTGGCATTCGCAAGGCCAAGGTTAAGTTCAAAGTCTGCATAAATATATTGCTTCCTTTAGTTTTCTTTCTGAAATTATAATTCTGTTATTTCAGTTGTAGTTAGGGCTTTCGGTATTCGTTCAAACTGTGGAATTTTTTATGCTGAATTTATGAGTTAAAATCTTGATTTGAGTTTCCGATGAGCTACCTTTGTCAGCCTCCAGGTCGTCTCCCGTCAATAATGCTTCTATTTGTAACATTCTGAATGTAATTGGTACACTGCACGCCTTAGATACACATTAGACGCTTCTGACTTGCTTGAGGACCTAATTTCTGCTTTGAAATTGTGTTTTATCTTCAATATTCTGGTTGGTTATGCAGCCAATGATTTGGCTTGACCTTATCTATCCTTCATATAATATAAGAGGTTTTTCTTATCGAAGGCAAAAAACAGAACGATGAATCTGTTACTTCTACAAGTCTCATCCTCTTAAAAGCCTTGTACACGGCAAACATTTTTATGTATTTCAAACTCTTCTATAATATTATGATGTTCGGTTTTGTGACGATTTCATTCTTTTATTTGTTTTGGTTTACTTCAATCATCGAGTCTTTTCTAGTTCATTAGAAAATGCTTTATTGTATTATCTTTCGTGTTTTGCAGTTTCCAGAGTTCATCAGTTCATTTTTCTCCCGATTTTCTTTGCCATCTGTGGGGAACCCTCCAGCAGCCCCAAATGTTAGAGGAAATATGCCATCTTTCATGGGCCGCCAGGTTGAGGTTAGTACATTTGGCAAATGCTTCTATTCGCTCTTAGTTTGATCGCATTTCGATAAGCTACTACATCATGGTAGTGTGAGAATGTTGGTATTCGCTAACGTTGTAGTCGTATAGATGACATGGAAAATGTAAGTTGTGCGCTTCAGCCTCTTAACTGGTTTACTTTCTCTTGTGCTATTTTAGAGGAACTATACTCCTGTGCCAACTGCCATAGAACCACCAGAGGACTCCATTGCCACCCTTGTTTCGATGGGCTTCGACAGAAACTCAGCCAGGCAGGCTCTTGTGCAGGCCAGAAATGACGTTAACATGGCGACAAACATCCTTCTCGAATCACAATCGCACTAATTTCACGAAAAAATTTCTGGGTATATAAAACCTTTGTTATCCACAATACCGAGAACAATCGAATTCAGTTTCAAGTGAAGATGGTCCGACAAATTTGCATTTGCTGACAACCGAGTATTGATGGGTTGCAGGAACTCACCAGGCTGTTTTTCTGAACTCTTACGGGTTCTCCTTTTGTTCCTCTCTATGATAGATGTCAAATTTTCTTGATACTTGATGTCTGATTACTAATGACTGCTTAGTCTGTACGTATTAAATTAAGCTGGTAGAGTCAGAGATACTTGTGGAAGCTGAATGTGCAGAATTCTTTTGATATCTATATAAAAAGTTGCAGATTCTTACAGAAA

mRNA sequence

ATTTTCGGTTTTTAAAAAACGGGAAAAGATCTGAAAAAATAGAGAAGAGAAATAGTTGTTCAGAACCAAAAGAGGAAGAGATAAATCGAATTTCCAGTCCAAAGCTTCCAACACACAACACAACAAATCAACAATCAAACAAACAAACAAAAACCCTCCGGCCGCCTGAGAAGATCGCCGTTGCTTCTTCTCCGACGCCATGAACGGCGGCGGCCCGTCTGGTTTCAACAATGCCCCCGTCACCCGGACCTTCATCATCGCCTCCGCTCTTTTCGCCGTCTTCTTCGGGATCCAAGGCCGCTCAGCTAAGCTTGGCCTGTCCTATCAGGATGTGATTGTGAAGCTTCGCTTTTGGAAGTTAGTAATGTCAGTTTTTGCCTTTTCATCTACTCCTGAATTAATGTCCGGACTGTTTCTGCTTTATTACTTCAGAGTATTTGAGAGACAGATAGGTTCCAACAAATATTCGGTCTTTATCTTGTTCTCTATAATAACCTCCTTACTTTTTGAGGTCCTTGCAATATCATTACTTAAAGATCCTGCAGCAAATCTAGTCACTTCTGGACCTTATGGTCTTTTATTTGCTTCCTTTGTACCGTTCTTTTTTGATATCCCCGTTTCAACTTGGTTCAGTGTATTTGGAGTTCGTTTCTCTGACAAGTCTTTCATATATCTGGCTGGTCTTCAGCTCCTCCTATCCTCGTGGAGAAGATCCATCTTACCAGGAATATGCGGCATTCTTGCTGGTTCCTTATATCGTTTGAATGTATTTGGCATTCGCAAGGCCAAGTTTCCAGAGTTCATCAGTTCATTTTTCTCCCGATTTTCTTTGCCATCTGTGGGGAACCCTCCAGCAGCCCCAAATGTTAGAGGAAATATGCCATCTTTCATGGGCCGCCAGGTTGAGAGGAACTATACTCCTGTGCCAACTGCCATAGAACCACCAGAGGACTCCATTGCCACCCTTGTTTCGATGGGCTTCGACAGAAACTCAGCCAGGCAGGCTCTTGTGCAGGCCAGAAATGACGTTAACATGGCGACAAACATCCTTCTCGAATCACAATCGCACTAATTTCACGAAAAAATTTCTGGGTATATAAAACCTTTGTTATCCACAATACCGAGAACAATCGAATTCAGTTTCAAGTGAAGATGGTCCGACAAATTTGCATTTGCTGACAACCGAGTATTGATGGGTTGCAGGAACTCACCAGGCTGTTTTTCTGAACTCTTACGGGTTCTCCTTTTGTTCCTCTCTATGATAGATGTCAAATTTTCTTGATACTTGATGTCTGATTACTAATGACTGCTTAGTCTGTACGTATTAAATTAAGCTGGTAGAGTCAGAGATACTTGTGGAAGCTGAATGTGCAGAATTCTTTTGATATCTATATAAAAAGTTGCAGATTCTTACAGAAA

Coding sequence (CDS)

ATGAACGGCGGCGGCCCGTCTGGTTTCAACAATGCCCCCGTCACCCGGACCTTCATCATCGCCTCCGCTCTTTTCGCCGTCTTCTTCGGGATCCAAGGCCGCTCAGCTAAGCTTGGCCTGTCCTATCAGGATGTGATTGTGAAGCTTCGCTTTTGGAAGTTAGTAATGTCAGTTTTTGCCTTTTCATCTACTCCTGAATTAATGTCCGGACTGTTTCTGCTTTATTACTTCAGAGTATTTGAGAGACAGATAGGTTCCAACAAATATTCGGTCTTTATCTTGTTCTCTATAATAACCTCCTTACTTTTTGAGGTCCTTGCAATATCATTACTTAAAGATCCTGCAGCAAATCTAGTCACTTCTGGACCTTATGGTCTTTTATTTGCTTCCTTTGTACCGTTCTTTTTTGATATCCCCGTTTCAACTTGGTTCAGTGTATTTGGAGTTCGTTTCTCTGACAAGTCTTTCATATATCTGGCTGGTCTTCAGCTCCTCCTATCCTCGTGGAGAAGATCCATCTTACCAGGAATATGCGGCATTCTTGCTGGTTCCTTATATCGTTTGAATGTATTTGGCATTCGCAAGGCCAAGTTTCCAGAGTTCATCAGTTCATTTTTCTCCCGATTTTCTTTGCCATCTGTGGGGAACCCTCCAGCAGCCCCAAATGTTAGAGGAAATATGCCATCTTTCATGGGCCGCCAGGTTGAGAGGAACTATACTCCTGTGCCAACTGCCATAGAACCACCAGAGGACTCCATTGCCACCCTTGTTTCGATGGGCTTCGACAGAAACTCAGCCAGGCAGGCTCTTGTGCAGGCCAGAAATGACGTTAACATGGCGACAAACATCCTTCTCGAATCACAATCGCACTAA

Protein sequence

MNGGGPSGFNNAPVTRTFIIASALFAVFFGIQGRSAKLGLSYQDVIVKLRFWKLVMSVFAFSSTPELMSGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAISLLKDPAANLVTSGPYGLLFASFVPFFFDIPVSTWFSVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAGSLYRLNVFGIRKAKFPEFISSFFSRFSLPSVGNPPAAPNVRGNMPSFMGRQVERNYTPVPTAIEPPEDSIATLVSMGFDRNSARQALVQARNDVNMATNILLESQSH

Homology

[Close]

BLAST of Sed0017951 vs. NCBI nr
Match: XP_022154191.1 (rhomboid-like protein 20 [Momordica charantia])

HSP 1 Score: 517.3 bits (1331), Expect = 8.5e-143
Identity = 271/290 (93.45%), Postives = 277/290 (95.52%), Query Frame = 0


Query: 4   GGPSGFNNAPVTRTFIIASALFAVFFGIQGRSAKLGLSYQDVIVKLRFWKLVMSVFAFSS 63
           GGPSGFNNAPVTRTFIIASALF +FFGIQGRS KLGLSYQDVIVKLRFWKL+MSVFAFSS
Sbjct: 3   GGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLLMSVFAFSS 62

Query: 64  TPELMSGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAISLLKDPAANLVTSGP 123
           TPELM GLFLLYYFRVFERQIGSNKYSVFILFSI+TSLLFEVLAISLLKDPA NLVTSGP
Sbjct: 63  TPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIVTSLLFEVLAISLLKDPAVNLVTSGP 122

Query: 124 YGLLFASFVPFFFDIPVSTWFSVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAG 183
           YGLLFASFVPFFFDIPVST F VFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAG
Sbjct: 123 YGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAG 182

Query: 184 SLYRLNVFGIRKAKFPEFISSFFSRFSLPSVGNPP-AAPN--VRGNMPSFMGRQVERNYT 243
           SLYRLNVFGIRKAKFPEFISSFFS+FSLPSVGNPP AAPN  VRGNMPSF GRQVERNY 
Sbjct: 183 SLYRLNVFGIRKAKFPEFISSFFSQFSLPSVGNPPAAAPNRDVRGNMPSFTGRQVERNYP 242

Query: 244 PVPTAIEPPEDSIATLVSMGFDRNSARQALVQARNDVNMATNILLESQSH 291
            VPTA EPPEDSIATLVSMGFDRNSARQALV+ARNDVNMATNILLE+QSH
Sbjct: 243 TVPTATEPPEDSIATLVSMGFDRNSARQALVRARNDVNMATNILLEAQSH 292

[Close]

BLAST of Sed0017951 vs. NCBI nr
Match: XP_038904170.1 (rhomboid-like protein 20 isoform X1 [Benincasa hispida])

HSP 1 Score: 515.8 bits (1327), Expect = 2.5e-142
Identity = 271/289 (93.77%), Postives = 275/289 (95.16%), Query Frame = 0


Query: 4   GGPSGFNNAPVTRTFIIASALFAVFFGIQGRSAKLGLSYQDVIVKLRFWKLVMSVFAFSS 63
           GGPSGFNNAPVTRTFIIASALF +FFGIQGRS KLGLSYQDVIVKLRF KLVMSVFAFSS
Sbjct: 3   GGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFLKLVMSVFAFSS 62

Query: 64  TPELMSGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAISLLKDPAANLVTSGP 123
           TPELM GLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAI+LLKDPAANLVTSGP
Sbjct: 63  TPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAIALLKDPAANLVTSGP 122

Query: 124 YGLLFASFVPFFFDIPVSTWFSVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAG 183
           YGLLFASFVPFFFDIPVST F VFG+RFSDKSFIYLAGLQLLLSSWRRSILPGICGILAG
Sbjct: 123 YGLLFASFVPFFFDIPVSTRFRVFGLRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAG 182

Query: 184 SLYRLNVFGIRKAKFPEFISSFFSRFSLPSVGNPPAAPN--VRGNMPSFMGRQVERNYTP 243
           SLYRLNVFGIRKAK PEFISSFFSR SLPSVGNPPAAPN  VRGNMPSFM RQVERNY  
Sbjct: 183 SLYRLNVFGIRKAKLPEFISSFFSRLSLPSVGNPPAAPNRDVRGNMPSFMSRQVERNYPS 242

Query: 244 VPTAIEPPEDSIATLVSMGFDRNSARQALVQARNDVNMATNILLESQSH 291
           VPTA EPPEDSIATLVSMGFDRNSARQALVQARNDVN+ATNILLESQSH
Sbjct: 243 VPTATEPPEDSIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 291

[Close]

BLAST of Sed0017951 vs. NCBI nr
Match: XP_008464944.1 (PREDICTED: rhomboid-like protein 20 [Cucumis melo] >KAA0057225.1 rhomboid-like protein 20 [Cucumis melo var. makuwa] >TYK18737.1 rhomboid-like protein 20 [Cucumis melo var. makuwa])

HSP 1 Score: 515.8 bits (1327), Expect = 2.5e-142
Identity = 269/289 (93.08%), Postives = 274/289 (94.81%), Query Frame = 0


Query: 4   GGPSGFNNAPVTRTFIIASALFAVFFGIQGRSAKLGLSYQDVIVKLRFWKLVMSVFAFSS 63
           GGPSGFNNAPVTRTFIIASALF +FFGIQGRS KLGLSYQDVIVKLRFWKLVMSVFAFSS
Sbjct: 3   GGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAFSS 62

Query: 64  TPELMSGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAISLLKDPAANLVTSGP 123
           TPELM GLFLLYYFRVFERQIGSNKYSVFILFSII+SLLFEVLAISLLKDPAANLVTSGP
Sbjct: 63  TPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTSGP 122

Query: 124 YGLLFASFVPFFFDIPVSTWFSVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAG 183
           YGLLFASFVPFFFDIPVST F VFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAG
Sbjct: 123 YGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAG 182

Query: 184 SLYRLNVFGIRKAKFPEFISSFFSRFSLPSVGNPPAAPN--VRGNMPSFMGRQVERNYTP 243
           SLYRLNVFGIRKAKFPEFISSFFSR SLPS GNPPAAPN  VRGNMPSFM R VERNY  
Sbjct: 183 SLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVERNYPS 242

Query: 244 VPTAIEPPEDSIATLVSMGFDRNSARQALVQARNDVNMATNILLESQSH 291
            P+A EPPED+IATLVSMGFDRNSARQALVQARNDVN+ATNILLESQSH
Sbjct: 243 APSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 291

[Close]

BLAST of Sed0017951 vs. NCBI nr
Match: XP_022936013.1 (rhomboid-like protein 20 [Cucurbita moschata])

HSP 1 Score: 515.4 bits (1326), Expect = 3.2e-142
Identity = 272/292 (93.15%), Postives = 276/292 (94.52%), Query Frame = 0


Query: 4   GGPSGFNNAPVTRTFIIASALFAVFFGIQGRSAKLGLSYQDVIVKLRFWKLVMSVFAFSS 63
           GGPSGFNNAPVTRTFIIASALF VFFGIQ RS KLGLSYQDVIVKLRFWKLVMSVFAFSS
Sbjct: 3   GGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAFSS 62

Query: 64  TPELMSGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAISLLKDP---AANLVT 123
           TPEL+ GLFLLYYFRVFERQIGSNKYSVF LFSII SLLFEVLAISLLKDP   AANLVT
Sbjct: 63  TPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANLVT 122

Query: 124 SGPYGLLFASFVPFFFDIPVSTWFSVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGI 183
           SGPYGLLFASFVPFFFDIPVST F VFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGI
Sbjct: 123 SGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGI 182

Query: 184 LAGSLYRLNVFGIRKAKFPEFISSFFSRFSLPSVGNPPAAPN--VRGNMPSFMGRQVERN 243
           LAGSLYRLNVFGIRKAKFPEFISSFFSRF LPSVGNPPAAPN  VRGNMPSFM RQVERN
Sbjct: 183 LAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVERN 242

Query: 244 YTPVPTAIEPPEDSIATLVSMGFDRNSARQALVQARNDVNMATNILLESQSH 291
           +TPVPTA EPPEDSIATLVSMGFDRNSARQAL++ARNDVNMATNILLESQSH
Sbjct: 243 FTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294

[Close]

BLAST of Sed0017951 vs. NCBI nr
Match: KAG6596983.1 (Rhomboid-like protein 20, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 514.6 bits (1324), Expect = 5.5e-142
Identity = 271/292 (92.81%), Postives = 276/292 (94.52%), Query Frame = 0


Query: 4   GGPSGFNNAPVTRTFIIASALFAVFFGIQGRSAKLGLSYQDVIVKLRFWKLVMSVFAFSS 63
           GGPSGFNNAPVTRTFIIASALF VFFGIQ RS KLGLSYQDVIVKLRFWKLVMSVFAFSS
Sbjct: 3   GGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAFSS 62

Query: 64  TPELMSGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAISLLKDP---AANLVT 123
           TPEL+ GLFLLYYFRVFERQIGSNKYSVF LFSII SLLFEVLAISLLKDP   AANLVT
Sbjct: 63  TPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANLVT 122

Query: 124 SGPYGLLFASFVPFFFDIPVSTWFSVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGI 183
           SGPYGLLFASFVPFFFDIPVST F VFGVRFSDKSFIYLAG+QLLLSSWRRSILPGICGI
Sbjct: 123 SGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGIQLLLSSWRRSILPGICGI 182

Query: 184 LAGSLYRLNVFGIRKAKFPEFISSFFSRFSLPSVGNPPAAPN--VRGNMPSFMGRQVERN 243
           LAGSLYRLNVFGIRKAKFPEFISSFFSRF LPSVGNPPAAPN  VRGNMPSFM RQVERN
Sbjct: 183 LAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVERN 242

Query: 244 YTPVPTAIEPPEDSIATLVSMGFDRNSARQALVQARNDVNMATNILLESQSH 291
           +TPVPTA EPPEDSIATLVSMGFDRNSARQAL++ARNDVNMATNILLESQSH
Sbjct: 243 FTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294

[Close]

BLAST of Sed0017951 vs. ExPASy Swiss-Prot
Match: Q9LET3 (Rhomboid-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=RBL20 PE=2 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 7.5e-118
Identity = 217/291 (74.57%), Postives = 248/291 (85.22%), Query Frame = 0


Query: 4   GGPSGFNNAPVTRTFIIASALFAVFFGIQGRSAKLGLSYQDVIVKLRFWKLVMSVFAFSS 63
           GGPSGF+NAPVT+ F+I SALF VFFGIQGRS+KLGLSYQD+  K R WKL+MS FAFSS
Sbjct: 3   GGPSGFHNAPVTKAFVITSALFTVFFGIQGRSSKLGLSYQDIFEKFRIWKLIMSTFAFSS 62

Query: 64  TPELMSGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAISLLKDPAANLVTSGP 123
           TPELM GL+LLYYFRVFERQIGSNKYSVFILFS   SLL EV+ +SLLKD  ANL+TSGP
Sbjct: 63  TPELMFGLYLLYYFRVFERQIGSNKYSVFILFSGTVSLLLEVILLSLLKDTTANLLTSGP 122

Query: 124 YGLLFASFVPFFFDIPVSTWFSVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAG 183
           YGL+FASF+PF+ DIPVST F VFGV FSDKSFIYLAG+QLLLSSW+RSI PGICGI+AG
Sbjct: 123 YGLIFASFIPFYLDIPVSTRFRVFGVNFSDKSFIYLAGVQLLLSSWKRSIFPGICGIIAG 182

Query: 184 SLYRLNVFGIRKAKFPEFISSFFSRFSLPSVGN-PPAAP--NVRGNMPSFMGRQVERNY- 243
           SLYRLN+ GIRKAKFPEF++SFFSR S PS GN PP AP  N+ G +    GR+ ER+  
Sbjct: 183 SLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPPPAPSRNIVGTISPNTGRRAERSQP 242

Query: 244 TPVPTAIEPPEDSIATLVSMGFDRNSARQALVQARNDVNMATNILLESQSH 291
            P+P+++EP E++I TLVSMGFDRN+ARQALV ARNDVN ATNILLE+QSH
Sbjct: 243 APLPSSVEPSEEAITTLVSMGFDRNAARQALVHARNDVNAATNILLEAQSH 293

[Close]

BLAST of Sed0017951 vs. ExPASy Swiss-Prot
Match: Q8RXQ2 (Rhomboid-like protein 18 OS=Arabidopsis thaliana OX=3702 GN=RBL18 PE=2 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 1.4e-108
Identity = 203/288 (70.49%), Postives = 238/288 (82.64%), Query Frame = 0


Query: 4   GGPSGFNNAPVTRTFIIASALFAVFFGIQGRSAKLGLSYQDVIVKLRFWKLVMSVFAFSS 63
           GGPSGFNNAPVT+ F+IA+ALF VFFGI+G S+KLGLSYQD+  K R WKL++S FAFSS
Sbjct: 3   GGPSGFNNAPVTKAFVIATALFTVFFGIRGGSSKLGLSYQDIFEKFRIWKLIISAFAFSS 62

Query: 64  TPELMSGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAISLLKDPAANLVTSGP 123
           T +L+SGL+LLY+FRVFERQIGSNKYSVFI FS   SL+ E + +SL KDP ANL+TSGP
Sbjct: 63  TTQLLSGLYLLYFFRVFERQIGSNKYSVFIFFSGFVSLILETILLSLTKDPTANLLTSGP 122

Query: 124 YGLLFASFVPFFFDIPVSTWFSVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAG 183
           Y L+FASFVPFF DIPV+  F V GV FSDKSFIYLAG+QLLLSSW+RSI  GICGI+AG
Sbjct: 123 YALVFASFVPFFLDIPVTKRFGVLGVHFSDKSFIYLAGVQLLLSSWKRSIFTGICGIIAG 182

Query: 184 SLYRLNVFGIRKAKFPEFISSFFSRFSLPSVGNPPAAPNVRGNMPSFMGRQVERNY-TPV 243
           SLYRLN+FGIRKAKFPEF++S FSRFSLPS+ +    P  R   P+ +GRQ  R Y  P+
Sbjct: 183 SLYRLNIFGIRKAKFPEFMASLFSRFSLPSLSSHSQPP--RRTSPN-LGRQAVRAYRAPM 242

Query: 244 PTAIEPPEDSIATLVSMGFDRNSARQALVQARNDVNMATNILLESQSH 291
           P+  EP E++IATLVSMGFD+N+ARQALV ARNDVN ATNILLE+ SH
Sbjct: 243 PSTTEPSEEAIATLVSMGFDQNAARQALVHARNDVNAATNILLEAHSH 287

[Close]

BLAST of Sed0017951 vs. ExPASy Swiss-Prot
Match: Q5ZJQ8 (Ubiquitin-associated domain-containing protein 2 OS=Gallus gallus OX=9031 GN=UBAC2 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.4e-17
Identity = 86/341 (25.22%), Postives = 146/341 (42.82%), Query Frame = 0


Query: 5   GPSGFNNAPVTRTFIIASALFAVFFGIQGRSAKLGLSYQDVIVK--LRFWKLVMSVFAFS 64
           G +G   AP++++ ++  +  ++   +  +  +   +Y    +K   + W+LV       
Sbjct: 6   GSNGLYKAPLSKSLLLVPSAISILLTLLFQHYQKFFAYNLQAIKEDFQIWRLVCGRVICL 65

Query: 65  STPELMSGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAISLLK---DPAANLV 124
              +      L+Y FR+FER+ GS K+S F+L +   S LF++L +   +       N +
Sbjct: 66  DLKDTFCSSLLIYNFRIFERRYGSRKFSSFLLGAWTLSALFDLLLVEAAQYVFGITINSL 125

Query: 125 TSGPYGLLFASFVPFFFDIPVSTWFSVFG-VRFSDKSFIYLAGLQLLLSSWRRSILPGIC 184
            SG  G +FA FVPF+  IP      V G    ++K+ +Y+ GLQLL S     IL  + 
Sbjct: 126 PSGFLGPVFALFVPFYCSIPRVQVTQVLGYFSITNKTLVYILGLQLLTSGSYIWIL-ALS 185

Query: 185 GILAGSLYRLNVFGIRKAK-FPEFISSFFSRFSLPSVGNPPAAPNVRGNMPS-------- 244
           G+++G  Y  ++  + +    P +++  FS    P   +      +R  M +        
Sbjct: 186 GLISGICYNSSILKVHRILCVPSWVAKIFSWTLEPIFSSAEPTNEIRVGMGATVDIQRQQ 245

Query: 245 ---FMGRQV--------------------------------ERNY---------TPVPTA 287
               + RQ+                                  NY         TP PT 
Sbjct: 246 RMELLDRQIMMSQVAQMRRQRQQQGGMINWNRLFPPLRHRHNENYQDHHPSDQDTPPPT- 305

[Close]

BLAST of Sed0017951 vs. ExPASy Swiss-Prot
Match: Q4R910 (Ubiquitin-associated domain-containing protein 2 OS=Macaca fascicularis OX=9541 GN=UBAC2 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 5.7e-17
Identity = 86/343 (25.07%), Postives = 147/343 (42.86%), Query Frame = 0


Query: 5   GPSGFNNAPVTRTFIIASALFAVFFGIQGRSAKLGLSYQDVIVK--LRFWKLVMSVFAFS 64
           G SG   AP++++ ++  +  ++   +     +    Y    VK   + W+L+       
Sbjct: 6   GSSGLYKAPLSKSLLLVPSALSLLLALLLPHCQKLFVYDLHAVKNDFQIWRLICGRIICL 65

Query: 65  STPELMSGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAISLLK----DPAANL 124
              +      L+Y FR+FER+ GS K++ F+L S + S LF+ L +  ++      AA+ 
Sbjct: 66  DLKDTFCSSLLIYNFRIFERRYGSRKFASFLLGSWVLSALFDFLLVEAMQYFFGITAASN 125

Query: 125 VTSGPYGLLFASFVPFFFDIPVSTWFSVFG-VRFSDKSFIYLAGLQLLLSS---WRRSIL 184
           + SG    +FA FVPF+  IP      + G +  ++K+ IY+ GLQL  S    W    +
Sbjct: 126 LPSGFLAPVFALFVPFYCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSGSYIW----I 185

Query: 185 PGICGILAGSLYRLNVFGIRKAK-FPEFISSFFSRFSLP--SVGNPPAAPNV-------- 244
             I G+++G  Y   +F + +    P +++ FFS    P  S   P +   +        
Sbjct: 186 VAISGLMSGLCYNSKMFQVHQVLCIPSWMAKFFSWTLEPIFSSSEPTSEARIGMGATLDI 245

Query: 245 -RGNMPSFMGRQV---------------------ERNYTPV------------------P 287
            R      + RQ+                      R + P+                  P
Sbjct: 246 QRQQRMELLDRQLMFSQFAQGRRQRQQQGGMINWNRLFPPLRQRQNVNYQGGRQSEPAAP 305

[Close]

BLAST of Sed0017951 vs. ExPASy Swiss-Prot
Match: Q8NBM4 (Ubiquitin-associated domain-containing protein 2 OS=Homo sapiens OX=9606 GN=UBAC2 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 7.5e-17
Identity = 86/342 (25.15%), Postives = 143/342 (41.81%), Query Frame = 0


Query: 5   GPSGFNNAPVTRTFIIASALFAVFFGIQGRSAKLGLSYQDVIVK--LRFWKLVMSVFAFS 64
           G SG   AP++++ ++  +  ++   +     +    Y    VK   + W+L+       
Sbjct: 6   GSSGLYKAPLSKSLLLVPSALSLLLALLLPHCQKLFVYDLHAVKNDFQIWRLICGRIICL 65

Query: 65  STPELMSGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAISLLK----DPAANL 124
              +      L+Y FR+FER+ GS K++ F+L S + S LF+ L I  ++      AA+ 
Sbjct: 66  DLKDTFCSSLLIYNFRIFERRYGSRKFASFLLGSWVLSALFDFLLIEAMQYFFGITAASN 125

Query: 125 VTSGPYGLLFASFVPFFFDIPVSTWFSVFG-VRFSDKSFIYLAGLQLLLSS---WRRSIL 184
           + SG    +FA FVPF+  IP      + G +  ++K+ IY+ GLQL  S    W    +
Sbjct: 126 LPSGFLAPVFALFVPFYCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSGSYIW----I 185

Query: 185 PGICGILAGSLYRLNVFGIRKAK-FPEFISSFFSRFSLPSVGNPPAAPNVRGNMPSFM-- 244
             I G+++G  Y   +F + +    P +++ FFS    P   +       R  M + +  
Sbjct: 186 VAISGLMSGLCYDSKMFQVHQVLCIPSWMAKFFSWTLEPIFSSSEPTSEARIGMGATLDI 245

Query: 245 --------------------GR---------------------------QVERNYTPVPT 287
                               GR                           Q  R   P   
Sbjct: 246 QRQQRMELLDRQLMFSQFAQGRRQRQQQGGMINWNRLFPPLRQRQNVNYQGGRQSEPAAP 305

[Close]

BLAST of Sed0017951 vs. ExPASy TrEMBL
Match: A0A6J1DN01 (rhomboid-like protein 20 OS=Momordica charantia OX=3673 GN=LOC111021509 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 4.1e-143
Identity = 271/290 (93.45%), Postives = 277/290 (95.52%), Query Frame = 0


Query: 4   GGPSGFNNAPVTRTFIIASALFAVFFGIQGRSAKLGLSYQDVIVKLRFWKLVMSVFAFSS 63
           GGPSGFNNAPVTRTFIIASALF +FFGIQGRS KLGLSYQDVIVKLRFWKL+MSVFAFSS
Sbjct: 3   GGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLLMSVFAFSS 62

Query: 64  TPELMSGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAISLLKDPAANLVTSGP 123
           TPELM GLFLLYYFRVFERQIGSNKYSVFILFSI+TSLLFEVLAISLLKDPA NLVTSGP
Sbjct: 63  TPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIVTSLLFEVLAISLLKDPAVNLVTSGP 122

Query: 124 YGLLFASFVPFFFDIPVSTWFSVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAG 183
           YGLLFASFVPFFFDIPVST F VFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAG
Sbjct: 123 YGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAG 182

Query: 184 SLYRLNVFGIRKAKFPEFISSFFSRFSLPSVGNPP-AAPN--VRGNMPSFMGRQVERNYT 243
           SLYRLNVFGIRKAKFPEFISSFFS+FSLPSVGNPP AAPN  VRGNMPSF GRQVERNY 
Sbjct: 183 SLYRLNVFGIRKAKFPEFISSFFSQFSLPSVGNPPAAAPNRDVRGNMPSFTGRQVERNYP 242

Query: 244 PVPTAIEPPEDSIATLVSMGFDRNSARQALVQARNDVNMATNILLESQSH 291
            VPTA EPPEDSIATLVSMGFDRNSARQALV+ARNDVNMATNILLE+QSH
Sbjct: 243 TVPTATEPPEDSIATLVSMGFDRNSARQALVRARNDVNMATNILLEAQSH 292

[Close]

BLAST of Sed0017951 vs. ExPASy TrEMBL
Match: A0A5D3D5B1 (Rhomboid-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00390 PE=4 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 1.2e-142
Identity = 269/289 (93.08%), Postives = 274/289 (94.81%), Query Frame = 0


Query: 4   GGPSGFNNAPVTRTFIIASALFAVFFGIQGRSAKLGLSYQDVIVKLRFWKLVMSVFAFSS 63
           GGPSGFNNAPVTRTFIIASALF +FFGIQGRS KLGLSYQDVIVKLRFWKLVMSVFAFSS
Sbjct: 3   GGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAFSS 62

Query: 64  TPELMSGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAISLLKDPAANLVTSGP 123
           TPELM GLFLLYYFRVFERQIGSNKYSVFILFSII+SLLFEVLAISLLKDPAANLVTSGP
Sbjct: 63  TPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTSGP 122

Query: 124 YGLLFASFVPFFFDIPVSTWFSVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAG 183
           YGLLFASFVPFFFDIPVST F VFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAG
Sbjct: 123 YGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAG 182

Query: 184 SLYRLNVFGIRKAKFPEFISSFFSRFSLPSVGNPPAAPN--VRGNMPSFMGRQVERNYTP 243
           SLYRLNVFGIRKAKFPEFISSFFSR SLPS GNPPAAPN  VRGNMPSFM R VERNY  
Sbjct: 183 SLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVERNYPS 242

Query: 244 VPTAIEPPEDSIATLVSMGFDRNSARQALVQARNDVNMATNILLESQSH 291
            P+A EPPED+IATLVSMGFDRNSARQALVQARNDVN+ATNILLESQSH
Sbjct: 243 APSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 291

[Close]

BLAST of Sed0017951 vs. ExPASy TrEMBL
Match: A0A1S3CMQ9 (rhomboid-like protein 20 OS=Cucumis melo OX=3656 GN=LOC103502692 PE=4 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 1.2e-142
Identity = 269/289 (93.08%), Postives = 274/289 (94.81%), Query Frame = 0


Query: 4   GGPSGFNNAPVTRTFIIASALFAVFFGIQGRSAKLGLSYQDVIVKLRFWKLVMSVFAFSS 63
           GGPSGFNNAPVTRTFIIASALF +FFGIQGRS KLGLSYQDVIVKLRFWKLVMSVFAFSS
Sbjct: 3   GGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAFSS 62

Query: 64  TPELMSGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAISLLKDPAANLVTSGP 123
           TPELM GLFLLYYFRVFERQIGSNKYSVFILFSII+SLLFEVLAISLLKDPAANLVTSGP
Sbjct: 63  TPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTSGP 122

Query: 124 YGLLFASFVPFFFDIPVSTWFSVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAG 183
           YGLLFASFVPFFFDIPVST F VFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAG
Sbjct: 123 YGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAG 182

Query: 184 SLYRLNVFGIRKAKFPEFISSFFSRFSLPSVGNPPAAPN--VRGNMPSFMGRQVERNYTP 243
           SLYRLNVFGIRKAKFPEFISSFFSR SLPS GNPPAAPN  VRGNMPSFM R VERNY  
Sbjct: 183 SLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVERNYPS 242

Query: 244 VPTAIEPPEDSIATLVSMGFDRNSARQALVQARNDVNMATNILLESQSH 291
            P+A EPPED+IATLVSMGFDRNSARQALVQARNDVN+ATNILLESQSH
Sbjct: 243 APSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 291

[Close]

BLAST of Sed0017951 vs. ExPASy TrEMBL
Match: A0A6J1FC34 (rhomboid-like protein 20 OS=Cucurbita moschata OX=3662 GN=LOC111442736 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.6e-142
Identity = 272/292 (93.15%), Postives = 276/292 (94.52%), Query Frame = 0


Query: 4   GGPSGFNNAPVTRTFIIASALFAVFFGIQGRSAKLGLSYQDVIVKLRFWKLVMSVFAFSS 63
           GGPSGFNNAPVTRTFIIASALF VFFGIQ RS KLGLSYQDVIVKLRFWKLVMSVFAFSS
Sbjct: 3   GGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAFSS 62

Query: 64  TPELMSGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAISLLKDP---AANLVT 123
           TPEL+ GLFLLYYFRVFERQIGSNKYSVF LFSII SLLFEVLAISLLKDP   AANLVT
Sbjct: 63  TPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANLVT 122

Query: 124 SGPYGLLFASFVPFFFDIPVSTWFSVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGI 183
           SGPYGLLFASFVPFFFDIPVST F VFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGI
Sbjct: 123 SGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGI 182

Query: 184 LAGSLYRLNVFGIRKAKFPEFISSFFSRFSLPSVGNPPAAPN--VRGNMPSFMGRQVERN 243
           LAGSLYRLNVFGIRKAKFPEFISSFFSRF LPSVGNPPAAPN  VRGNMPSFM RQVERN
Sbjct: 183 LAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVERN 242

Query: 244 YTPVPTAIEPPEDSIATLVSMGFDRNSARQALVQARNDVNMATNILLESQSH 291
           +TPVPTA EPPEDSIATLVSMGFDRNSARQAL++ARNDVNMATNILLESQSH
Sbjct: 243 FTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294

[Close]

BLAST of Sed0017951 vs. ExPASy TrEMBL
Match: A0A0A0LG81 (UBA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G840970 PE=4 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 2.3e-141
Identity = 268/289 (92.73%), Postives = 272/289 (94.12%), Query Frame = 0


Query: 4   GGPSGFNNAPVTRTFIIASALFAVFFGIQGRSAKLGLSYQDVIVKLRFWKLVMSVFAFSS 63
           GGPSGFNNAPVTRTFIIASALF +FFGIQGRS KLGLSYQDVIVKLR WKLVMSVFAFSS
Sbjct: 3   GGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAFSS 62

Query: 64  TPELMSGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAISLLKDPAANLVTSGP 123
           TPELM GLFLLYYFRVFERQIGSNKYSVFILFSI +SLLFEVLAISLLKDPAANLVTSGP
Sbjct: 63  TPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTSGP 122

Query: 124 YGLLFASFVPFFFDIPVSTWFSVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAG 183
           YGLLFASFVPFFFDIPVST F VFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAG
Sbjct: 123 YGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAG 182

Query: 184 SLYRLNVFGIRKAKFPEFISSFFSRFSLPSVGNPPAAPN--VRGNMPSFMGRQVERNYTP 243
           SLYRLNVFGIRKAKFPEFISSFFSR SLPS GNPPAAPN  VRGNMPSFM RQVERNY  
Sbjct: 183 SLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRQVERNYPS 242

Query: 244 VPTAIEPPEDSIATLVSMGFDRNSARQALVQARNDVNMATNILLESQSH 291
           VPTA EP ED+IATLVSMGFDRNSARQALVQARNDVN+ATNILLESQ H
Sbjct: 243 VPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH 291

[Close]

BLAST of Sed0017951 vs. TAIR 10
Match: AT3G56740.1 (Ubiquitin-associated (UBA) protein )

HSP 1 Score: 424.9 bits (1091), Expect = 5.3e-119
Identity = 217/291 (74.57%), Postives = 248/291 (85.22%), Query Frame = 0


Query: 4   GGPSGFNNAPVTRTFIIASALFAVFFGIQGRSAKLGLSYQDVIVKLRFWKLVMSVFAFSS 63
           GGPSGF+NAPVT+ F+I SALF VFFGIQGRS+KLGLSYQD+  K R WKL+MS FAFSS
Sbjct: 3   GGPSGFHNAPVTKAFVITSALFTVFFGIQGRSSKLGLSYQDIFEKFRIWKLIMSTFAFSS 62

Query: 64  TPELMSGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAISLLKDPAANLVTSGP 123
           TPELM GL+LLYYFRVFERQIGSNKYSVFILFS   SLL EV+ +SLLKD  ANL+TSGP
Sbjct: 63  TPELMFGLYLLYYFRVFERQIGSNKYSVFILFSGTVSLLLEVILLSLLKDTTANLLTSGP 122

Query: 124 YGLLFASFVPFFFDIPVSTWFSVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAG 183
           YGL+FASF+PF+ DIPVST F VFGV FSDKSFIYLAG+QLLLSSW+RSI PGICGI+AG
Sbjct: 123 YGLIFASFIPFYLDIPVSTRFRVFGVNFSDKSFIYLAGVQLLLSSWKRSIFPGICGIIAG 182

Query: 184 SLYRLNVFGIRKAKFPEFISSFFSRFSLPSVGN-PPAAP--NVRGNMPSFMGRQVERNY- 243
           SLYRLN+ GIRKAKFPEF++SFFSR S PS GN PP AP  N+ G +    GR+ ER+  
Sbjct: 183 SLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPPPAPSRNIVGTISPNTGRRAERSQP 242

Query: 244 TPVPTAIEPPEDSIATLVSMGFDRNSARQALVQARNDVNMATNILLESQSH 291
            P+P+++EP E++I TLVSMGFDRN+ARQALV ARNDVN ATNILLE+QSH
Sbjct: 243 APLPSSVEPSEEAITTLVSMGFDRNAARQALVHARNDVNAATNILLEAQSH 293

[Close]

BLAST of Sed0017951 vs. TAIR 10
Match: AT2G41160.1 (Ubiquitin-associated (UBA) protein )

HSP 1 Score: 394.0 bits (1011), Expect = 1.0e-109
Identity = 203/288 (70.49%), Postives = 238/288 (82.64%), Query Frame = 0


Query: 4   GGPSGFNNAPVTRTFIIASALFAVFFGIQGRSAKLGLSYQDVIVKLRFWKLVMSVFAFSS 63
           GGPSGFNNAPVT+ F+IA+ALF VFFGI+G S+KLGLSYQD+  K R WKL++S FAFSS
Sbjct: 3   GGPSGFNNAPVTKAFVIATALFTVFFGIRGGSSKLGLSYQDIFEKFRIWKLIISAFAFSS 62

Query: 64  TPELMSGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAISLLKDPAANLVTSGP 123
           T +L+SGL+LLY+FRVFERQIGSNKYSVFI FS   SL+ E + +SL KDP ANL+TSGP
Sbjct: 63  TTQLLSGLYLLYFFRVFERQIGSNKYSVFIFFSGFVSLILETILLSLTKDPTANLLTSGP 122

Query: 124 YGLLFASFVPFFFDIPVSTWFSVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAG 183
           Y L+FASFVPFF DIPV+  F V GV FSDKSFIYLAG+QLLLSSW+RSI  GICGI+AG
Sbjct: 123 YALVFASFVPFFLDIPVTKRFGVLGVHFSDKSFIYLAGVQLLLSSWKRSIFTGICGIIAG 182

Query: 184 SLYRLNVFGIRKAKFPEFISSFFSRFSLPSVGNPPAAPNVRGNMPSFMGRQVERNY-TPV 243
           SLYRLN+FGIRKAKFPEF++S FSRFSLPS+ +    P  R   P+ +GRQ  R Y  P+
Sbjct: 183 SLYRLNIFGIRKAKFPEFMASLFSRFSLPSLSSHSQPP--RRTSPN-LGRQAVRAYRAPM 242

Query: 244 PTAIEPPEDSIATLVSMGFDRNSARQALVQARNDVNMATNILLESQSH 291
           P+  EP E++IATLVSMGFD+N+ARQALV ARNDVN ATNILLE+ SH
Sbjct: 243 PSTTEPSEEAIATLVSMGFDQNAARQALVHARNDVNAATNILLEAHSH 287

The following BLAST results are available for this feature:

BLAST of Sed0017951 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154191.1	8.5e-143	93.45	rhomboid-like protein 20 [Momordica charantia]	[more]
XP_038904170.1	2.5e-142	93.77	rhomboid-like protein 20 isoform X1 [Benincasa hispida]	[more]
XP_008464944.1	2.5e-142	93.08	PREDICTED: rhomboid-like protein 20 [Cucumis melo] >KAA0057225.1 rhomboid-like p...	[more]
XP_022936013.1	3.2e-142	93.15	rhomboid-like protein 20 [Cucurbita moschata]	[more]
KAG6596983.1	5.5e-142	92.81	Rhomboid-like protein 20, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0017951 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LET3	7.5e-118	74.57	Rhomboid-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=RBL20 PE=2 SV=1	[more]
Q8RXQ2	1.4e-108	70.49	Rhomboid-like protein 18 OS=Arabidopsis thaliana OX=3702 GN=RBL18 PE=2 SV=1	[more]
Q5ZJQ8	3.4e-17	25.22	Ubiquitin-associated domain-containing protein 2 OS=Gallus gallus OX=9031 GN=UBA...	[more]
Q4R910	5.7e-17	25.07	Ubiquitin-associated domain-containing protein 2 OS=Macaca fascicularis OX=9541 ...	[more]
Q8NBM4	7.5e-17	25.15	Ubiquitin-associated domain-containing protein 2 OS=Homo sapiens OX=9606 GN=UBAC...	[more]

BLAST of Sed0017951 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DN01	4.1e-143	93.45	rhomboid-like protein 20 OS=Momordica charantia OX=3673 GN=LOC111021509 PE=4 SV=...	[more]
A0A5D3D5B1	1.2e-142	93.08	Rhomboid-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CMQ9	1.2e-142	93.08	rhomboid-like protein 20 OS=Cucumis melo OX=3656 GN=LOC103502692 PE=4 SV=1	[more]
A0A6J1FC34	1.6e-142	93.15	rhomboid-like protein 20 OS=Cucurbita moschata OX=3662 GN=LOC111442736 PE=4 SV=1	[more]
A0A0A0LG81	2.3e-141	92.73	UBA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G840970 PE=4 SV...	[more]

BLAST of Sed0017951 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56740.1	5.3e-119	74.57	Ubiquitin-associated (UBA) protein	[more]
AT2G41160.1	1.0e-109	70.49	Ubiquitin-associated (UBA) protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 249..286 e-value: 2.1E-11 score: 53.9
IPR015940	Ubiquitin-associated domain	PFAM	PF00627	UBA	coord: 249..284 e-value: 6.5E-12 score: 45.1
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 247..287 score: 14.836119
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 10..189 e-value: 5.8E-7 score: 31.5
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 10..187
None	No IPR available	GENE3D	1.10.8.10		coord: 232..290 e-value: 1.9E-13 score: 52.2
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 233..287

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017951.1	Sed0017951.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004252	serine-type endopeptidase activity