Sed0017933 (gene) Chayote v1

Overview


Name	Sed0017933
Type	gene
Organism	Sechium edule (Chayote v1)
Description	spindle pole body component 110-like isoform X1
Location	LG07: 12453238 .. 12458944 (+)
RNA-Seq Expression	Sed0017933
Synteny	Sed0017933

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGAGGTCATGAGTGATGATGATCATGCCCCAGCGGAAAATTTATCTAGAGCACGCAAAAAACAAAAGAAAAAAGGGAATTTGTCAGTAAATGATTGTGAAGGTTATGGTGCTGAAAGTGATGATGATAAGATAACCACTCTCTCCAGTGAAACTACGGTTAAGGAATCAGGGAAGAAAGTAAGGGGCAATGTTCACGAAACCTCCACACAGTGTCCAGATAATCATGTTTTGAAAAGGCATTTTTCTTCAGGTACTGGTGATTCTGAAAATGCCAGTTCCTCTTCAAGGGCCGCTGCAGTCATGGTGAGGGTAAAATGTAAATCACTTAATTCCAAGTTCAAGTACGCTTCTAATAGCCAGTAGGAACCTTAACTGTATTATAATATAGAAATATGGGAACTACTAGATAACCAAATTCTTAAAAGAACTTGGACTTGGACCCGCTTATCACGAGTTCACTCAAGTCTAATTCCACTGACTGAATTGTATGCCTATCATCTTCTATGCCCACTCCCTTTATTATAACTAACAATCTAATCAACTATCTAAGTATGTATTAATGTATCCTCACTATAAATTCTATTTTCTTCATTTGGTATCGACTACTATAATGAGGACTGTTCCATTTTCTCAGATTCTGATGGCAATATTCAAAAGAGATATGACTCGAGTCGTCTTAAGTTAAAGGACCTAGAGAAGAGGTGTAATGAAAAATGGGAAGCGGAGGCTGAAATGCGTGCTGCATTTGATGAAAATGATTTGTTGTGCATGGAGGCTGTTTGTATCCTCTATAAACAATCAAGTCCAATAGGAAAGCCAAGTAGTGCATTGTCTTCCAGACAAAGAGGATTTAATGAGGCTGATATGCTCAGGTATCTAATCAACTTTTTCACTGATGTTTATTTATTACATTATTTCATATGTTGATTTTAACACCCTTATGGGGTGTTTGTTTTAAGAGGAGGTGAGAGGAGGTGAGATGAGGTGAGGTGTTGAAGCCCAACACCTTGTTTGGCCCAATGTGTTTTTCACCTCATCTCATCTTCTCTCTCCTCTTTTTTTCTTTTTTCCTTTTTAAATTTAAAATTTTTTCATCTTTTTATTTATATATATTTACTTATTTACTTATTTTATGTTTGATATATTTTGTTATAATATTATTATTATTTTAATATATCAATATATAGTTATAATAACTATACTATTATTATATCAAATGTTTATTTAAATATATTTGAATTTTAAAAATTAAAATTAATAGATATATAATATATGATGTTAAATTTTCATATTTTTATTCATTTTTTAATCATCTTTAATAACAAAAAAAAGTTATAGAATTTTAATGGTTTAGAGATAGACTATAATATATCATATTTAAAAATTAATAATTAAAAGTTATGTGTTTATTTTTAATATTAACAATAAATATATCAATTATTATTAAAATAAAAATTAAATTTAAATAATTTATACACATTGAATTTTTATTCGTAGTTTACAATAGATTTAAAAGTATGAACTTATTTTCAATAAACTTAAAAATATTAAACTTATTTTGTTTGTTAAAAAAATGAGATTCAAATTTTATACTCTTATATTCAGCATTGCACTTTGAAATAATAGTAAGAGTGATTTTTTTTTTGAAAGGATAAATTAATTTGAATAATTTTGAGAGTCTTAATTGTATATACAAAAAACAACTATAAATTTCAAGACTTGTATGAGTTATAAGGATTGGGATCTATTCTACCTAATAAAAAAAACAATAAATTCCAAAATTTGAGGGATATTTTATTACTTCCATGTAATAATTATTATCAAAATGTGACCGAGTTCTCTTTTAACTACAAAAAAACAATAAATAAAAAATTGTAGGGGTGTCTATGGTTCCCTATAAGTATCAATGACTAATAAGATAAATATATTTAATTTATTATTACCTATTAATTAGTGTATTTTATTAACAATTCTTTGACCTTCGGTAACTATGAATATGAATATGAATGTATAAAAGGTATAAGAAAATAATTTTTCTAAAATAAAATAAAAATTGCTATCAAGATTTTATAATGACTAGTTTAACCAAATGGTTTTATTTTTATTTTTTAATAATTAGAATCTTGGTATTTTTAAATTTTTATTATTATTTAAGTCTAACAAATCTTTTAAAAAAAAGTTATTAACGATGTACAAATATTTTAGATTAGTCAAAATTTATTTTGGTCTTGTGGAATTTTTTTTTTCATAATTTTTTTAAAATTAAACAATATTTAAGTATGAAAGATTAGAAACTTTTAATCTTATGGTTATTATGTCGTACATAATATCATTGAAACTATGCTTTTTTTAATAAAAACATTAATATGATTAAGGGTGTTTAATATTAAATTTATATTACTTACACTTTATTTATGATAGTAGTTATATTTACATACTTATTGTATTAATAGCTAAATATTTGAGAATAATTATTTTTTAAAAAAAGAAAAAGAACAATTTTATTGTTAAAAAAAAATATAAGAACAGATTTTTTTTTTTTTTAAACATATCTTAACATCTCATTTCGTCTCCTTCCACCCCAAACAAGGTTTTTCTGTCATCTCATCTCATCTCCCTGCACCCCAAACAAGATTTTTCTGTCATCTCATCTCACCCCAAACAAGGTTTTCTGCTATCAACATTTCATCTCATCTCACTTGCAGCCAAACACCCCCTTATTAAATTTGTTGTCGTTTAATATGCTCCAACTGTTTTCTGTACTTTCTGTAGTGAGCATTTGATGTTTCAAGCCTTTTTGACACAAGCACCAAGGCTCAGTTACTTCTGTTTCCATTGTTTTTAGTTTTTAACTTATTTTCAGTGATACCTCACTTAAATGCAAAGTTTTTGTTCCCTGCTTGTGTTCTGTCCGTCTTTTGTGATGACTGTTTGTGCATGAAAGTTTTCCAGCACTGAGTGATGTTCTTGTAAAGCTAGCTGAGTACTAATGTGGCATTAAATTTTCTGATCAAAATTTATCGAGGGGTTCCACATTGGCATTGTTTCTAAGCAGCGGAGATTCAAAAGGGACATTGAAGAAATCTGTGATGGAGCTGAATAACTTCGACATAGGTGGTCTTATTGACTGTCGAAGTATGGCCATCAAGTATTTGAAGCAGTTATTTGAAATATATAAGAACAATGAAGATCAATTCCTATTTCAGTCAATGTTTTCAATGCCATTGCCTTTCCTTACCTATGGTCATCGCCTTGCACATTATTACGCCTGTAATAGCCAAGGCAAGCTCCTTCAATCAGACCTTCAACTTTTCTCGCCATTTTGTGCCACGCATCGCCTTTCACCTCAGGCCGAAACGCTGATTTCAGTAAAGAGACTACTGATAAGTCTACTTGTTGCTTAGTATCAGATGTAAGATCTTTTGTTTATCCCTTTACTGTATATAATATCACGTTTCTCTCTGCTGACTTTCACATATCGACATCAATAGGAAACAAACAATGCAAGAACTTTCATTACATATTTTTTCTCTTGAAAACCAACTAACCTATCATTCTATAGGCCAAATCTGAGGCATTAGATAGCCTCCAATACAAGATAGAACGGACTGAGGGAACAAATACAAACCCCCTGCTACAGGAAACCCCATCCCACAACAACCTAAAATCAAAACAATGGAGATAAAGGGGCTCAAAGAGGCAGAACAACAAGAGGACCGCCCAGGGGCTTTACAAATTACAGACTTAGACTTTGTAGTGTCCAAGCAAAAAGACCCGATAAACCTCGTCAACACGCACTTGGAGACCTTTGGGGGCAATTTGATAACAATGTGAACTATTGAAGAACACGACCCCACCAAAGCTATGAGGGGAAGAGACGATCTTAGATAGAGTCTACTCTTACCCTGGAACGACCAATCAAATTAAGATTCCTTTACCAACTAGTTCCTTTTCAGGACACAGCAACAAAAAAAGTGCATAAACTAAGAACAGGTCCTGAAAAACTAAAGGACATACAAAATGCAGGCTGAAAGAGTATAACCGATTGAAGGGAAGGAGATTAGAACCCTAACAAAATGTGATCCAGAAGGCCAGCCTCTCTAAAACTTAAGTTGTCTCCCATTACAATTGTTATATCATATGGTTTAGGTCAATACTATTTATCAAATCAGTTTGTTAGAACTTAGAACTAGTTCCTTTCTTTGGTACCGTGCAGCAACTTTGCTTCAATATATTACTATTGCTCGGGGTGTTTGAGGATTCCACCTAATCTCACATCGAAAAGATAAGTAGACCTCCTAACATTTATAATATAGATGTGTTACTTTATTCATTATCAATTAATTTTGATCTCAAATTCCATATTATTTATTTAATATAATATTAGAGTTCATTAAATTCAAATGAGTATTCAGTTTTAAAAAAGAAATTGAGATTTAATTTAAGAATGATAATCTTAAAGAGTCATCATTTTGAGAGAGCAAATCTCACATTCAAAAGGTGAAGGTAAAATCTCCAAGAGGTGGCACAGTGATTTTTATAAGATTTATAGGATACAGAAGTTACTTCTACTCATTTAAATTGATTTTGAACCGGAACATGTCTAAAAAGGGAGAGAAGACTATTTGAATTGTAGAAAAGTTTCAACCTGATTTGAATAGAAAAATTGTCCAAAATATGATCTGCATTACCATTTATTCTTAACTTTTTATTTTCAGTTTTGAACAGTCTAAGATTTTGGTGGCCATTAGAACTTCCTCATGTTCTGTCAACACCAATAGCGATGGTCACCATGTAACCTCTCTCTTTTTTTCGTTCATTTTTCAATGTGCAGAAATGTAAATGACCCCCTGAAAACGAAAAGAAAAAAAAGAAGCTAAAGTTTTATCTAAAGCCAAATATTCCAGTAGGGGCTTAAGGATTAAGCTAACCCTCACACTTATAAATATAAGAAATATATATTTATTTTAGTATGATAGTTTTATAAAATTGAATACTAAAATAAATATATATTTGATGAAACTTAAAATATAGTCTTTATCTTATGTCATCATTAACATATTATATACACAAAAACTCATTATTCATATTTAAATGATATGATTTTTTTTATATCAATCATTTAATTCATAATTTCATTAATGAAACATGAACAAGTAACTTTTAAGTACTTAATTTGCTAATTTTAGAAACGACAAAGATTATATTTTAAGTTTTATCAAATCATAGGAATTAAATTTTGGTTTTTAAAAAATATATAAGTATTAAATTTTATATTTTTTAAAATCACAATCACTTAAACTCTAATTTTTAAAAGTTCTAAACTCCACCGAATTCAAATTTAAAAATCGGCATTTGACTCTTATATTATTTAATAGCACGTGTCACCTGTATGTAGGGTGATTGCTAATTTTTTAAGGTACTAAAACAAACTTTATAATTAGGTACTAAACTTATATTTTAGTGAAGCCTTATTTAGACGTTGGAAATGTGAGCGTCTCCATATCTTCTGCATGTTCGTTCCCATCTTCTCTTCATTTTCCTCACAGTGATTCTGCCATTCAAGCCTTCTCTTTCGTCTCCTTGAAGAAGACCGAACGATTTGTTCTTCGAGGTTAGTTTCTTCGTCTTTTAGGGTTGTGTGAGGCATTTGTTGTAATTTCTGGTATTTATTGTTCTTGCAGTAGTTTATTCTCGTTAA

mRNA sequence

ATGGTTGAGGTCATGAGTGATGATGATCATGCCCCAGCGGAAAATTTATCTAGAGCACGCAAAAAACAAAAGAAAAAAGGGAATTTGTCAGTAAATGATTGTGAAGGTTATGGTGCTGAAAGTGATGATGATAAGATAACCACTCTCTCCAGTGAAACTACGGTTAAGGAATCAGGGAAGAAAGTAAGGGGCAATGTTCACGAAACCTCCACACAGTGTCCAGATAATCATGTTTTGAAAAGGCATTTTTCTTCAGGTACTGGTGATTCTGAAAATGCCAGTTCCTCTTCAAGGGCCGCTGCAGTCATGGTGAGGGTAAAATATTCTGATGGCAATATTCAAAAGAGATATGACTCGAGTCGTCTTAAGTTAAAGGACCTAGAGAAGAGGTGTAATGAAAAATGGGAAGCGGAGGCTGAAATGCGTGCTGCATTTGATGAAAATGATTTGTTGTGCATGGAGGCTGTTTGTATCCTCTATAAACAATCAAGTCCAATAGGAAAGCCAAGTAGTGCATTGTCTTCCAGACAAAGAGGATTTAATGAGGCTGATATGCTCAGCGGAGATTCAAAAGGGACATTGAAGAAATCTGTGATGGAGCTGAATAACTTCGACATAGGTGGTCTTATTGACTGTCGAAACGTTGGAAATGTGAGCGTCTCCATATCTTCTGCATGTTCGTTCCCATCTTCTCTTCATTTTCCTCACAGTGATTCTGCCATTCAAGCCTTCTCTTTCGTCTCCTTGAAGAAGACCGAACGATTTGTTCTTCGAGTAGTTTATTCTCGTTAA

Coding sequence (CDS)

ATGGTTGAGGTCATGAGTGATGATGATCATGCCCCAGCGGAAAATTTATCTAGAGCACGCAAAAAACAAAAGAAAAAAGGGAATTTGTCAGTAAATGATTGTGAAGGTTATGGTGCTGAAAGTGATGATGATAAGATAACCACTCTCTCCAGTGAAACTACGGTTAAGGAATCAGGGAAGAAAGTAAGGGGCAATGTTCACGAAACCTCCACACAGTGTCCAGATAATCATGTTTTGAAAAGGCATTTTTCTTCAGGTACTGGTGATTCTGAAAATGCCAGTTCCTCTTCAAGGGCCGCTGCAGTCATGGTGAGGGTAAAATATTCTGATGGCAATATTCAAAAGAGATATGACTCGAGTCGTCTTAAGTTAAAGGACCTAGAGAAGAGGTGTAATGAAAAATGGGAAGCGGAGGCTGAAATGCGTGCTGCATTTGATGAAAATGATTTGTTGTGCATGGAGGCTGTTTGTATCCTCTATAAACAATCAAGTCCAATAGGAAAGCCAAGTAGTGCATTGTCTTCCAGACAAAGAGGATTTAATGAGGCTGATATGCTCAGCGGAGATTCAAAAGGGACATTGAAGAAATCTGTGATGGAGCTGAATAACTTCGACATAGGTGGTCTTATTGACTGTCGAAACGTTGGAAATGTGAGCGTCTCCATATCTTCTGCATGTTCGTTCCCATCTTCTCTTCATTTTCCTCACAGTGATTCTGCCATTCAAGCCTTCTCTTTCGTCTCCTTGAAGAAGACCGAACGATTTGTTCTTCGAGTAGTTTATTCTCGTTAA

Protein sequence

MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGKKVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAAAVMVRVKYSDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSALSSRQRGFNEADMLSGDSKGTLKKSVMELNNFDIGGLIDCRNVGNVSVSISSACSFPSSLHFPHSDSAIQAFSFVSLKKTERFVLRVVYSR

Homology

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BLAST of Sed0017933 vs. NCBI nr
Match: XP_022980056.1 (uncharacterized protein LOC111479556 isoform X3 [Cucurbita maxima])

HSP 1 Score: 241.1 bits (614), Expect = 1.1e-59
Identity = 135/226 (59.73%), Postives = 161/226 (71.24%), Query Frame = 0


Query: 1   MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGK 60
           MVE++SDDDHAP +N SRAR+KQK+  +L +NDCE Y  E DD+KI TL SET  KE+ K
Sbjct: 299 MVEIISDDDHAPVKNSSRARRKQKRTWDLLLNDCEDYDPERDDEKIPTLPSETNGKEALK 358

Query: 61  KVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAAAVMVRVKYSDGNIQKRYDSS 120
           KV           PDNHVLKRHFS+ T DS+N  SSSRA AVM+R + +  N   +YDS+
Sbjct: 359 KVGAMYATPPHGRPDNHVLKRHFSARTNDSKNVMSSSRAVAVMLREECNSHNSMFKYDST 418

Query: 121 RLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSA-LSSRQRG 180
            LK K   KR N+KWE+EAEMRAAFDEND+LCMEAVCILY+QSS +GKP SA L SR RG
Sbjct: 419 HLKSKGQGKRSNKKWESEAEMRAAFDENDMLCMEAVCILYRQSSLVGKPRSAYLPSRHRG 478

Query: 181 FNEADML----------SGDSKGTLKKSVMELNNFDIGGLIDCRNV 216
           F+E D+L           GDS+G LK+SVMEL  FDI GLIDCR +
Sbjct: 479 FHEVDLLRGSTLALFLTGGDSQGKLKRSVMELEKFDICGLIDCRRI 524

[Close]

BLAST of Sed0017933 vs. NCBI nr
Match: XP_023550796.1 (uncharacterized protein LOC111808815 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238.0 bits (606), Expect = 9.0e-59
Identity = 133/226 (58.85%), Postives = 160/226 (70.80%), Query Frame = 0


Query: 1   MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGK 60
           MVE++SDDDHAP +N SRAR+K+K+  +L +NDCE Y  E DD+KI+TL SET  KE+ K
Sbjct: 298 MVEIISDDDHAPVKNSSRARRKEKRTWDLLLNDCEDYDPERDDEKISTLPSETNGKEALK 357

Query: 61  KVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAAAVMVRVKYSDGNIQKRYDSS 120
           KV           PDNHVLKRH S+ T DS+N  SSSRA AVM+R +    N   +YDS+
Sbjct: 358 KVGAMYATPPHGRPDNHVLKRHLSTRTNDSKNVMSSSRAVAVMLREECKSHNSMFKYDST 417

Query: 121 RLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSA-LSSRQRG 180
            LK K   KR N+KWE+EAEMRAAFDEND+LCMEAVCILY+QSS +GKP SA L SR RG
Sbjct: 418 HLKSKGQGKRSNKKWESEAEMRAAFDENDMLCMEAVCILYRQSSLVGKPRSAYLPSRHRG 477

Query: 181 FNEADML----------SGDSKGTLKKSVMELNNFDIGGLIDCRNV 216
           F+E D+L           GDS+G LK+SVMEL  FDI GLIDCR +
Sbjct: 478 FHEVDLLRGSTLALFLTGGDSQGKLKRSVMELEKFDICGLIDCRRI 523

[Close]

BLAST of Sed0017933 vs. NCBI nr
Match: KAG6600532.1 (Arabinogalactan protein 20, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 235.3 bits (599), Expect = 5.8e-58
Identity = 132/226 (58.41%), Postives = 159/226 (70.35%), Query Frame = 0


Query: 1   MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGK 60
           MVE++SDDDHAP +N SRAR+K+K+  +L +NDCE Y  E DD+KI+TL SET  KE+ K
Sbjct: 298 MVEIISDDDHAPVKNSSRARRKEKRTWDLLLNDCEDYDPERDDEKISTLPSETNGKEALK 357

Query: 61  KVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAAAVMVRVKYSDGNIQKRYDSS 120
           KV           PDNHVLKRH S+ T DS+N  SSSRA AVM+R +    N   +YDS+
Sbjct: 358 KVGAMYATPPHGRPDNHVLKRHISTRTNDSKNVMSSSRAVAVMLREECKSHNSMFKYDST 417

Query: 121 RLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSA-LSSRQRG 180
            LK K   KR N+KW +EAEMRAAFDEND+LCMEAVCILY+QSS +GKP SA L SR RG
Sbjct: 418 HLKSKGQGKRSNKKWGSEAEMRAAFDENDMLCMEAVCILYRQSSLVGKPRSAYLPSRHRG 477

Query: 181 FNEADML----------SGDSKGTLKKSVMELNNFDIGGLIDCRNV 216
           F+E D+L           GDS+G LK+SVMEL  FDI GLIDCR +
Sbjct: 478 FHEVDLLRGSTLALFLTGGDSQGKLKRSVMELEKFDICGLIDCRRI 523

[Close]

BLAST of Sed0017933 vs. NCBI nr
Match: XP_022980041.1 (uncharacterized protein LOC111479556 isoform X1 [Cucurbita maxima])

HSP 1 Score: 235.3 bits (599), Expect = 5.8e-58
Identity = 141/252 (55.95%), Postives = 164/252 (65.08%), Query Frame = 0


Query: 1   MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGK 60
           MVE++SDDDHAP +N SRAR+KQK+  +L +NDCE Y  E DD+KI TL SET  KE+ K
Sbjct: 299 MVEIISDDDHAPVKNSSRARRKQKRTWDLLLNDCEDYDPERDDEKIPTLPSETNGKEALK 358

Query: 61  KVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAAAVMVR---------VKY--- 120
           KV           PDNHVLKRHFS+ T DS+N  SSSRA AVM+R          KY   
Sbjct: 359 KVGAMYATPPHGRPDNHVLKRHFSARTNDSKNVMSSSRAVAVMLREECNSHNSMFKYASF 418

Query: 121 --------------SDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCME 180
                         SD  IQ RYDS+ LK K   KR N+KWE+EAEMRAAFDEND+LCME
Sbjct: 419 GFNYFNEDCSFFSDSDCEIQNRYDSTHLKSKGQGKRSNKKWESEAEMRAAFDENDMLCME 478

Query: 181 AVCILYKQSSPIGKPSSA-LSSRQRGFNEADML----------SGDSKGTLKKSVMELNN 216
           AVCILY+QSS +GKP SA L SR RGF+E D+L           GDS+G LK+SVMEL  
Sbjct: 479 AVCILYRQSSLVGKPRSAYLPSRHRGFHEVDLLRGSTLALFLTGGDSQGKLKRSVMELEK 538

[Close]

BLAST of Sed0017933 vs. NCBI nr
Match: XP_022980049.1 (uncharacterized protein LOC111479556 isoform X2 [Cucurbita maxima])

HSP 1 Score: 235.3 bits (599), Expect = 5.8e-58
Identity = 141/252 (55.95%), Postives = 164/252 (65.08%), Query Frame = 0


Query: 1   MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGK 60
           MVE++SDDDHAP +N SRAR+KQK+  +L +NDCE Y  E DD+KI TL SET  KE+ K
Sbjct: 296 MVEIISDDDHAPVKNSSRARRKQKRTWDLLLNDCEDYDPERDDEKIPTLPSETNGKEALK 355

Query: 61  KVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAAAVMVR---------VKY--- 120
           KV           PDNHVLKRHFS+ T DS+N  SSSRA AVM+R          KY   
Sbjct: 356 KVGAMYATPPHGRPDNHVLKRHFSARTNDSKNVMSSSRAVAVMLREECNSHNSMFKYASF 415

Query: 121 --------------SDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCME 180
                         SD  IQ RYDS+ LK K   KR N+KWE+EAEMRAAFDEND+LCME
Sbjct: 416 GFNYFNEDCSFFSDSDCEIQNRYDSTHLKSKGQGKRSNKKWESEAEMRAAFDENDMLCME 475

Query: 181 AVCILYKQSSPIGKPSSA-LSSRQRGFNEADML----------SGDSKGTLKKSVMELNN 216
           AVCILY+QSS +GKP SA L SR RGF+E D+L           GDS+G LK+SVMEL  
Sbjct: 476 AVCILYRQSSLVGKPRSAYLPSRHRGFHEVDLLRGSTLALFLTGGDSQGKLKRSVMELEK 535

[Close]

BLAST of Sed0017933 vs. ExPASy TrEMBL
Match: A0A6J1ISI0 (uncharacterized protein LOC111479556 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111479556 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 5.2e-60
Identity = 135/226 (59.73%), Postives = 161/226 (71.24%), Query Frame = 0


Query: 1   MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGK 60
           MVE++SDDDHAP +N SRAR+KQK+  +L +NDCE Y  E DD+KI TL SET  KE+ K
Sbjct: 299 MVEIISDDDHAPVKNSSRARRKQKRTWDLLLNDCEDYDPERDDEKIPTLPSETNGKEALK 358

Query: 61  KVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAAAVMVRVKYSDGNIQKRYDSS 120
           KV           PDNHVLKRHFS+ T DS+N  SSSRA AVM+R + +  N   +YDS+
Sbjct: 359 KVGAMYATPPHGRPDNHVLKRHFSARTNDSKNVMSSSRAVAVMLREECNSHNSMFKYDST 418

Query: 121 RLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSA-LSSRQRG 180
            LK K   KR N+KWE+EAEMRAAFDEND+LCMEAVCILY+QSS +GKP SA L SR RG
Sbjct: 419 HLKSKGQGKRSNKKWESEAEMRAAFDENDMLCMEAVCILYRQSSLVGKPRSAYLPSRHRG 478

Query: 181 FNEADML----------SGDSKGTLKKSVMELNNFDIGGLIDCRNV 216
           F+E D+L           GDS+G LK+SVMEL  FDI GLIDCR +
Sbjct: 479 FHEVDLLRGSTLALFLTGGDSQGKLKRSVMELEKFDICGLIDCRRI 524

[Close]

BLAST of Sed0017933 vs. ExPASy TrEMBL
Match: A0A6J1IY94 (uncharacterized protein LOC111479556 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479556 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 2.8e-58
Identity = 141/252 (55.95%), Postives = 164/252 (65.08%), Query Frame = 0


Query: 1   MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGK 60
           MVE++SDDDHAP +N SRAR+KQK+  +L +NDCE Y  E DD+KI TL SET  KE+ K
Sbjct: 296 MVEIISDDDHAPVKNSSRARRKQKRTWDLLLNDCEDYDPERDDEKIPTLPSETNGKEALK 355

Query: 61  KVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAAAVMVR---------VKY--- 120
           KV           PDNHVLKRHFS+ T DS+N  SSSRA AVM+R          KY   
Sbjct: 356 KVGAMYATPPHGRPDNHVLKRHFSARTNDSKNVMSSSRAVAVMLREECNSHNSMFKYASF 415

Query: 121 --------------SDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCME 180
                         SD  IQ RYDS+ LK K   KR N+KWE+EAEMRAAFDEND+LCME
Sbjct: 416 GFNYFNEDCSFFSDSDCEIQNRYDSTHLKSKGQGKRSNKKWESEAEMRAAFDENDMLCME 475

Query: 181 AVCILYKQSSPIGKPSSA-LSSRQRGFNEADML----------SGDSKGTLKKSVMELNN 216
           AVCILY+QSS +GKP SA L SR RGF+E D+L           GDS+G LK+SVMEL  
Sbjct: 476 AVCILYRQSSLVGKPRSAYLPSRHRGFHEVDLLRGSTLALFLTGGDSQGKLKRSVMELEK 535

[Close]

BLAST of Sed0017933 vs. ExPASy TrEMBL
Match: A0A6J1ISG5 (uncharacterized protein LOC111479556 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479556 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 2.8e-58
Identity = 141/252 (55.95%), Postives = 164/252 (65.08%), Query Frame = 0


Query: 1   MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGK 60
           MVE++SDDDHAP +N SRAR+KQK+  +L +NDCE Y  E DD+KI TL SET  KE+ K
Sbjct: 299 MVEIISDDDHAPVKNSSRARRKQKRTWDLLLNDCEDYDPERDDEKIPTLPSETNGKEALK 358

Query: 61  KVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAAAVMVR---------VKY--- 120
           KV           PDNHVLKRHFS+ T DS+N  SSSRA AVM+R          KY   
Sbjct: 359 KVGAMYATPPHGRPDNHVLKRHFSARTNDSKNVMSSSRAVAVMLREECNSHNSMFKYASF 418

Query: 121 --------------SDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCME 180
                         SD  IQ RYDS+ LK K   KR N+KWE+EAEMRAAFDEND+LCME
Sbjct: 419 GFNYFNEDCSFFSDSDCEIQNRYDSTHLKSKGQGKRSNKKWESEAEMRAAFDENDMLCME 478

Query: 181 AVCILYKQSSPIGKPSSA-LSSRQRGFNEADML----------SGDSKGTLKKSVMELNN 216
           AVCILY+QSS +GKP SA L SR RGF+E D+L           GDS+G LK+SVMEL  
Sbjct: 479 AVCILYRQSSLVGKPRSAYLPSRHRGFHEVDLLRGSTLALFLTGGDSQGKLKRSVMELEK 538

[Close]

BLAST of Sed0017933 vs. ExPASy TrEMBL
Match: A0A6J1FPK8 (uncharacterized protein LOC111447644 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111447644 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 2.8e-58
Identity = 132/226 (58.41%), Postives = 159/226 (70.35%), Query Frame = 0


Query: 1   MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGK 60
           MVE++SDDDHAP +N SRAR+K+K+  +L +NDCE Y  E DD+KI+TL SET  KE+ K
Sbjct: 298 MVEIISDDDHAPVKNSSRARRKEKRTWDLLLNDCEDYDPERDDEKISTLPSETNGKEALK 357

Query: 61  KVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAAAVMVRVKYSDGNIQKRYDSS 120
           KV           PDNHVLKRH S+ T DS+N  SSSRA AVM+R +    N   +YDS+
Sbjct: 358 KVGAMYATPPHGRPDNHVLKRHISTRTNDSKNVMSSSRAVAVMLREECKSHNSMFKYDST 417

Query: 121 RLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSA-LSSRQRG 180
            LK K   KR N+KW +EAEMRAAFDEND+LCMEAVCILY+QSS +GKP SA L SR RG
Sbjct: 418 HLKSKGQGKRSNKKWGSEAEMRAAFDENDMLCMEAVCILYRQSSLVGKPRSAYLPSRHRG 477

Query: 181 FNEADML----------SGDSKGTLKKSVMELNNFDIGGLIDCRNV 216
           F+E D+L           GDS+G LK+SVMEL  FDI GLIDCR +
Sbjct: 478 FHEVDLLRGSTLALFLTGGDSQGKLKRSVMELEKFDICGLIDCRRI 523

[Close]

BLAST of Sed0017933 vs. ExPASy TrEMBL
Match: A0A6J1FWR7 (uncharacterized protein LOC111447644 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447644 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.2e-56
Identity = 138/252 (54.76%), Postives = 163/252 (64.68%), Query Frame = 0


Query: 1   MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGK 60
           MVE++SDDDHAP +N SRAR+K+K+  +L +NDCE Y  E DD+KI+TL SET  KE+ K
Sbjct: 295 MVEIISDDDHAPVKNSSRARRKEKRTWDLLLNDCEDYDPERDDEKISTLPSETNGKEALK 354

Query: 61  KVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAAAVMVR---------VKY--- 120
           KV           PDNHVLKRH S+ T DS+N  SSSRA AVM+R          KY   
Sbjct: 355 KVGAMYATPPHGRPDNHVLKRHISTRTNDSKNVMSSSRAVAVMLREECKSHNSMFKYASF 414

Query: 121 --------------SDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCME 180
                         SD  IQ RYDS+ LK K   KR N+KW +EAEMRAAFDEND+LCME
Sbjct: 415 GFNYFNEDCSFFSDSDCEIQNRYDSTHLKSKGQGKRSNKKWGSEAEMRAAFDENDMLCME 474

Query: 181 AVCILYKQSSPIGKPSSA-LSSRQRGFNEADML----------SGDSKGTLKKSVMELNN 216
           AVCILY+QSS +GKP SA L SR RGF+E D+L           GDS+G LK+SVMEL  
Sbjct: 475 AVCILYRQSSLVGKPRSAYLPSRHRGFHEVDLLRGSTLALFLTGGDSQGKLKRSVMELEK 534

[Close]

BLAST of Sed0017933 vs. TAIR 10
Match: AT5G53220.1 (unknown protein; Has 3099 Blast hits to 2528 proteins in 332 species: Archae - 2; Bacteria - 245; Metazoa - 1059; Fungi - 555; Plants - 177; Viruses - 49; Other Eukaryotes - 1012 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 6.3e-10
Identity = 49/139 (35.25%), Postives = 71/139 (51.08%), Query Frame = 0


Query: 89  DSENASSSSRAAAVMVRVKYSDGNIQKRYDSSRLKL-KDLEKRCNEKWEAEAEMRAAFDE 148
           D +++  S    +  + V+ SDG +      SRL+  K  EKR   KWE EA+M A F +
Sbjct: 207 DDDDSQESVSEKSDEIGVEESDGEVGYADVMSRLRREKKPEKR---KWEYEADMLADFGK 266

Query: 149 NDLLCMEAVCILYK-QSSPIGKPSSALSSRQRGFNEAD----------MLSGDSKGTLKK 208
           +  LCM AVC+L++ Q+       S+  S  RGF++ D          +  GDS G +KK
Sbjct: 267 DPELCMRAVCVLFRFQTEDEKVERSSHVSNGRGFSKVDAVRGTSIALFLTDGDSAGDMKK 326

Query: 209 SVMELNNFDIGGLIDCRNV 216
           SV EL  FD  G+  C  +
Sbjct: 327 SVEELKVFDFKGVEKCEEL 342

[Close]

BLAST of Sed0017933 vs. TAIR 10
Match: AT5G53220.2 (unknown protein; Has 3081 Blast hits to 2526 proteins in 331 species: Archae - 2; Bacteria - 227; Metazoa - 1059; Fungi - 555; Plants - 177; Viruses - 49; Other Eukaryotes - 1012 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 6.3e-10
Identity = 49/139 (35.25%), Postives = 71/139 (51.08%), Query Frame = 0


Query: 89  DSENASSSSRAAAVMVRVKYSDGNIQKRYDSSRLKL-KDLEKRCNEKWEAEAEMRAAFDE 148
           D +++  S    +  + V+ SDG +      SRL+  K  EKR   KWE EA+M A F +
Sbjct: 207 DDDDSQESVSEKSDEIGVEESDGEVGYADVMSRLRREKKPEKR---KWEYEADMLADFGK 266

Query: 149 NDLLCMEAVCILYK-QSSPIGKPSSALSSRQRGFNEAD----------MLSGDSKGTLKK 208
           +  LCM AVC+L++ Q+       S+  S  RGF++ D          +  GDS G +KK
Sbjct: 267 DPELCMRAVCVLFRFQTEDEKVERSSHVSNGRGFSKVDAVRGTSIALFLTDGDSAGDMKK 326

Query: 209 SVMELNNFDIGGLIDCRNV 216
           SV EL  FD  G+  C  +
Sbjct: 327 SVEELKVFDFKGVEKCEEL 342

[Close]

BLAST of Sed0017933 vs. TAIR 10
Match: AT5G53220.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 6.3e-10
Identity = 49/139 (35.25%), Postives = 71/139 (51.08%), Query Frame = 0


Query: 89  DSENASSSSRAAAVMVRVKYSDGNIQKRYDSSRLKL-KDLEKRCNEKWEAEAEMRAAFDE 148
           D +++  S    +  + V+ SDG +      SRL+  K  EKR   KWE EA+M A F +
Sbjct: 207 DDDDSQESVSEKSDEIGVEESDGEVGYADVMSRLRREKKPEKR---KWEYEADMLADFGK 266

Query: 149 NDLLCMEAVCILYK-QSSPIGKPSSALSSRQRGFNEAD----------MLSGDSKGTLKK 208
           +  LCM AVC+L++ Q+       S+  S  RGF++ D          +  GDS G +KK
Sbjct: 267 DPELCMRAVCVLFRFQTEDEKVERSSHVSNGRGFSKVDAVRGTSIALFLTDGDSAGDMKK 326

Query: 209 SVMELNNFDIGGLIDCRNV 216
           SV EL  FD  G+  C  +
Sbjct: 327 SVEELKVFDFKGVEKCEEL 342

The following BLAST results are available for this feature:

BLAST of Sed0017933 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022980056.1	1.1e-59	59.73	uncharacterized protein LOC111479556 isoform X3 [Cucurbita maxima]	[more]
XP_023550796.1	9.0e-59	58.85	uncharacterized protein LOC111808815 isoform X3 [Cucurbita pepo subsp. pepo]	[more]
KAG6600532.1	5.8e-58	58.41	Arabinogalactan protein 20, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022980041.1	5.8e-58	55.95	uncharacterized protein LOC111479556 isoform X1 [Cucurbita maxima]	[more]
XP_022980049.1	5.8e-58	55.95	uncharacterized protein LOC111479556 isoform X2 [Cucurbita maxima]	[more]

BLAST of Sed0017933 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0017933 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ISI0	5.2e-60	59.73	uncharacterized protein LOC111479556 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IY94	2.8e-58	55.95	uncharacterized protein LOC111479556 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1ISG5	2.8e-58	55.95	uncharacterized protein LOC111479556 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FPK8	2.8e-58	58.41	uncharacterized protein LOC111447644 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FWR7	1.2e-56	54.76	uncharacterized protein LOC111447644 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Sed0017933 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53220.1	6.3e-10	35.25	unknown protein; Has 3099 Blast hits to 2528 proteins in 332 species: Archae - 2...	[more]
AT5G53220.2	6.3e-10	35.25	unknown protein; Has 3081 Blast hits to 2526 proteins in 331 species: Archae - 2...	[more]
AT5G53220.3	6.3e-10	35.25	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..97
None	No IPR available	PANTHER	PTHR34380	BNAA03G12380D PROTEIN	coord: 5..215
None	No IPR available	PANTHER	PTHR34380:SF6	SUBFAMILY NOT NAMED	coord: 5..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017933.1	Sed0017933.1	mRNA