Sed0017903 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTTGGTCCCTTTTTTTTTATCCCACTTGGGTTTCAAGTGCATCTCTCCCTTTCCCCCCTTCTCAAGCCATTTCTCTTTCACTTCACAATCTCTCTCTCTATAAATTGGTTACCTATTTTTATTGCTTCCCCACAAAATTCCTTCACTATCTTTCAAAAAAAAAAAATACTCTCTTTCTTTCTTTCTTTCTCAAGTTTATGTAATTGCAGAGAAAAATGGCAGATTTCAATGGTGGACATGGGGACATGAGCTTTTGTGCTTCCCATGATCAAGAGGTAACTTTTCTCATACCTACCTTTTCAATTCTTGAAACTCAGATACTTTATTAAAGTTTAACGATAATTCAGAGTGTAGACTCGAACTTATGACAAACGTTACGTTTAGATTCATATAACGAACAATTTGAATTCAAATACAACAATTGAATTAGTCTTTTTCTTTTTCTTGAGAAAAAATAGATTTTTCTTTAAGCCCTCCTTTCCATTCTTTATCCACTTTGATCAAGCCATGCCATGCCATGACTCGCCATCTCGTTTTGTTTGAATTGTAAATCGAAACTTATGTTTTATTCATAAAAAAAATTAAGAACAACTACATGTGTAACTTAACATACGATTTGAATTCTTTTCTTTAAATGATGGCGATTCAATTTTTAAATAAAAACAAAAAAACAAAAAAAGCTACATAGTTACTTTAAATTTATACAAATAATAAAAAGGTTTTTTTTTTCATTTTTTGAAATTATAATAATTTGTGGATGGGAAATTTGAAATCATAATTTCTTGATAATTTGTTGTATTAATACCAACGAGTTAAAGAATATGATGATGAAAAATTGCATATAGTTTTTTTTTTTTTTTTTTTTTTTTTTGGAATTGAACTGAGTAACGGCTAGAGGCTATTTTGGGTATGTTATTTTACGACACAGAGCGAATAATACGTCAACTCCGTTGTCCAGTAACGGCGTTTTGTGGGCGTCGGTGGTTTTTAGATTCAGTCATCGCATACGACGTCGTATTTTAGTAATCGGGTTGTTGGGCTGTCAAATACCGGATCACGTGGAATCTCTGTGTTTTCAACTCCTTTTGTTTTACGACACGCGTTTGCCAACCTGTCATTTTTAGTTAATTCATTTTCCAACGTGTCACTTCCATTTTATTTTTTATTATTAAATAATTAATAATAAATGGGTCTTTTTTATTTTGTTGTTGATTTTATTATTATTTTAATTTATAGGCAATGTCCACGGGGAACAAGTACGGAGGGTTGGTGCCAAGGAAGAAGCCCTTGATTTCTAAGGTAATCAATTAACATACTAAATTGTCCCTCCTTGCTATATTCATATAAATAACATTTTAACAAGGTTGTCGTGCAATTATTATAAATTTATTCTTCTTTTAGATAATATAAAAAATTTATTCCCTAATTTAAAAATATATTTTTGTCTATGGGTGCATAGATAAGGGAAAGGAATGTTGAGCAAATTTTAACTCAATATGGTTTGTGACACAAAAAAACTCTTCCTCAACTCCACATTTCAATCATTCGTTTCGATTCGTCCTCCAAATAACTTTTTGGTTATACAATTTTATTTAAACATGATTTTCGTCCAATCACTAATTCAAACATAATTTATCTACGGTTCCTCTTTCAAACAATTTTATTTAAACATGGTTTTTGTGGAATCACAAATTCAAACACCACATTTTAACTACTTCATTCTTCCTTTATCCAAACATGCCCTCCACTACTAATAGCTTGAATTCGAATTGAATGAAAAATCACATTTTTAACACATGAATACTTCATTTTCATGTATATAATTTACAACGATTGTGAACGACTAGATTTTGTCAAACCATAAAGACTAAATGATTGTTTTTAAAATCATAGATATTAAATTATACTTTTTTTTCAAATTATAAAGACTAAATTCTAGTTTTTGAAACCAAATGAAATTAAACTCTAACTTTCATAAAATCATAGGCACCAAATTTATAATTTACTCTAATTATATGTATTTCAATAAATGAAATATCTGTATTAATATAAATAGAGTGAAAAGTGATGTTTGGATGCAGGATAATGAAAGAGCGTTCTTTGATTCAGCGGACTGGGCCCTGTGCAAGGTGATTCTTTAACCCCGAATAAGGATAGGACATTTCCTTCTGCCCAATCACGTTTCCTTATCTCAAGGAATAAGAATTTGGGCTGGTCCAATGTTTTCATAAAGCTTGGCCCATCCATAAAAAACAAATCAAAAGTAAAATAAAGTGGTGAAACTCTTGCTTTATTTTCTTCTTCTTTTTGTAAAAATATTCCCAGTAGATTAGGCGAGTCAAATTAAAACCTTAGATTATATATATATTTTTTATATGAATTTTAACCATGGAATGAAATTAAAAATTGAAATTACTTTGACTTTTTAGGAATGTTCCAATAAAGATCCTAACTTAACCGATAAAATATAGATTAATGAAAAAAATTATACGTTTGAATCTCTTCTTTATTTAAGGTGGAATAGTTAAAAAAAAATTGTGGAACTCATAAAATAATTTTGAAATGAAAATTTGATTATCGAACCCACATTTTATATAGTAGTAGACTTTTATGCCACCTATCGGGGATTCATAACAATTTTATAATTTAGTTTTAAAATTATCATTTTTTTTAAAACTCAACTCAAGTAAGAGAATCAAATTTACATTTTTCTTTAACAAACTTATGAAAATACATTTATATCGATGAATTTATCGCTCATATTGGAGAATGTTTTCCTAATCGATTCGAATAATTATTTGAATCTCTAACTTTTTAGTAGATAAAGTAAGATTTTCATCACTTCAGTTAGTCTTTACGATAACATTTTCGGTGCTCAATTACGATGAAATTGGTAAAACACAAATTATTTATAGAAGAATAAAAAATAAATAGTTAAACTATAAAAACATTTGAATTTTCTACTCATCAATAATTTCATTTCAAAATAACCAAGTAAAAAGTATTCAAAGTAATATAAGAAAATAATGATAGTAAATTACAGATATCTTTTTGGATAGTTAATTTTAATTATTTTTCGTGTTAATTTTAATATGGAAATTAAAGCAAGGTGCTGCTGGAGGGTATCAAAAATCAATGGCAATGGTTGAAAATCTGCGACCTAAATTACAGGTAACCAAGGCTACAAATATTAATGCCCATTTTGATAAATTAATTTTCTTAGTTTTAATTTTAGATTTAATTAATGTAATTCGTTAATTTGATGTTTTTTTTTGGATAATAATAATTCAGCGAACCCAACGCCAACAGCTTCCTCCTCGGCGACCCGCTTGTACGTCCGGACAAGACAACCTTGTATTGGTAAATACTGTTTTATATAAATTATAAGTTCAATTTAAATATCTAATTTACATGGTTTAATTATTAATATTTCAATATTGCATCGAATTATAAATTTTCACCATTTTAATTTAATTTATTTTTTATGCTTTGCAGGACGAGTGATATTTACGATTAATATCAAGTGCATACTTCGTTTTACTTTTTTTTTTTTTTTTTGGCATTTGTCTTTTTTATTTCATGGTTAGTTTAATGGAAATGTGTAAATGAACAATTTAATAAATCAAAGAAAATTATGTGAGCATTTTGG ATTTTGGTCCCTTTTTTTTTATCCCACTTGGGTTTCAAGTGCATCTCTCCCTTTCCCCCCTTCTCAAGCCATTTCTCTTTCACTTCACAATCTCTCTCTCTATAAATTGGTTACCTATTTTTATTGCTTCCCCACAAAATTCCTTCACTATCTTTCAAAAAAAAAAAATACTCTCTTTCTTTCTTTCTTTCTCAAGTTTATGTAATTGCAGAGAAAAATGGCAGATTTCAATGGTGGACATGGGGACATGAGCTTTTGTGCTTCCCATGATCAAGAGGCAATGTCCACGGGGAACAAGTACGGAGGGTTGGTGCCAAGGAAGAAGCCCTTGATTTCTAAGGATAATGAAAGAGCGTTCTTTGATTCAGCGGACTGGGCCCTGTGCAAGCAAGGTGCTGCTGGAGGGTATCAAAAATCAATGGCAATGGTTGAAAATCTGCGACCTAAATTACAGCGAACCCAACGCCAACAGCTTCCTCCTCGGCGACCCGCTTGTACGTCCGGACAAGACAACCTTGTATTGGACGAGTGATATTTACGATTAATATCAAGTGCATACTTCGTTTTACTTTTTTTTTTTTTTTTTGGCATTTGTCTTTTTTATTTCATGGTTAGTTTAATGGAAATGTGTAAATGAACAATTTAATAAATCAAAGAAAATTATGTGAGCATTTTGG ATGGCAGATTTCAATGGTGGACATGGGGACATGAGCTTTTGTGCTTCCCATGATCAAGAGGCAATGTCCACGGGGAACAAGTACGGAGGGTTGGTGCCAAGGAAGAAGCCCTTGATTTCTAAGGATAATGAAAGAGCGTTCTTTGATTCAGCGGACTGGGCCCTGTGCAAGCAAGGTGCTGCTGGAGGGTATCAAAAATCAATGGCAATGGTTGAAAATCTGCGACCTAAATTACAGCGAACCCAACGCCAACAGCTTCCTCCTCGGCGACCCGCTTGTACGTCCGGACAAGACAACCTTGTATTGGACGAGTGA MADFNGGHGDMSFCASHDQEAMSTGNKYGGLVPRKKPLISKDNERAFFDSADWALCKQGAAGGYQKSMAMVENLRPKLQRTQRQQLPPRRPACTSGQDNLVLDE Homology
BLAST of Sed0017903 vs. NCBI nr
Match: XP_022138174.1 (uncharacterized protein LOC111009410 [Momordica charantia]) HSP 1 Score: 178.3 bits (451), Expect = 3.3e-41 Identity = 87/104 (83.65%), Postives = 94/104 (90.38%), Query Frame = 0
BLAST of Sed0017903 vs. NCBI nr
Match: XP_038901294.1 (uncharacterized protein LOC120088222 [Benincasa hispida]) HSP 1 Score: 177.9 bits (450), Expect = 4.4e-41 Identity = 86/104 (82.69%), Postives = 93/104 (89.42%), Query Frame = 0
BLAST of Sed0017903 vs. NCBI nr
Match: XP_023526678.1 (uncharacterized protein LOC111790104 [Cucurbita pepo subsp. pepo] >KAG6582183.1 hypothetical protein SDJN03_22185, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 176.0 bits (445), Expect = 1.7e-40 Identity = 86/105 (81.90%), Postives = 95/105 (90.48%), Query Frame = 0
BLAST of Sed0017903 vs. NCBI nr
Match: KAG7018580.1 (hypothetical protein SDJN02_20450 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 175.6 bits (444), Expect = 2.2e-40 Identity = 86/102 (84.31%), Postives = 93/102 (91.18%), Query Frame = 0
BLAST of Sed0017903 vs. NCBI nr
Match: XP_004134239.1 (uncharacterized protein LOC101210404 isoform X2 [Cucumis sativus] >KAE8650402.1 hypothetical protein Csa_010973 [Cucumis sativus]) HSP 1 Score: 174.9 bits (442), Expect = 3.7e-40 Identity = 85/104 (81.73%), Postives = 92/104 (88.46%), Query Frame = 0
BLAST of Sed0017903 vs. ExPASy TrEMBL
Match: A0A6J1C9B6 (uncharacterized protein LOC111009410 OS=Momordica charantia OX=3673 GN=LOC111009410 PE=3 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.6e-41 Identity = 87/104 (83.65%), Postives = 94/104 (90.38%), Query Frame = 0
BLAST of Sed0017903 vs. ExPASy TrEMBL
Match: A0A0A0L810 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G166200 PE=3 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 2.3e-40 Identity = 85/101 (84.16%), Postives = 90/101 (89.11%), Query Frame = 0
BLAST of Sed0017903 vs. ExPASy TrEMBL
Match: A0A1S3AX63 (uncharacterized protein LOC103483882 OS=Cucumis melo OX=3656 GN=LOC103483882 PE=3 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.5e-39 Identity = 83/104 (79.81%), Postives = 90/104 (86.54%), Query Frame = 0
BLAST of Sed0017903 vs. ExPASy TrEMBL
Match: A0A6J1GV84 (uncharacterized protein LOC111457780 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457780 PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.0e-39 Identity = 86/106 (81.13%), Postives = 95/106 (89.62%), Query Frame = 0
BLAST of Sed0017903 vs. ExPASy TrEMBL
Match: A0A6J1GWH2 (uncharacterized protein LOC111457780 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457780 PE=3 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 2.6e-39 Identity = 86/103 (83.50%), Postives = 93/103 (90.29%), Query Frame = 0
BLAST of Sed0017903 vs. TAIR 10
Match: AT4G16146.1 (cAMP-regulated phosphoprotein 19-related protein ) HSP 1 Score: 115.2 bits (287), Expect = 3.2e-26 Identity = 57/88 (64.77%), Postives = 69/88 (78.41%), Query Frame = 0
BLAST of Sed0017903 vs. TAIR 10
Match: AT1G69510.1 (cAMP-regulated phosphoprotein 19-related protein ) HSP 1 Score: 80.1 bits (196), Expect = 1.2e-15 Identity = 45/80 (56.25%), Postives = 54/80 (67.50%), Query Frame = 0
BLAST of Sed0017903 vs. TAIR 10
Match: AT1G69510.3 (cAMP-regulated phosphoprotein 19-related protein ) HSP 1 Score: 80.1 bits (196), Expect = 1.2e-15 Identity = 45/80 (56.25%), Postives = 54/80 (67.50%), Query Frame = 0
BLAST of Sed0017903 vs. TAIR 10
Match: AT1G69510.2 (cAMP-regulated phosphoprotein 19-related protein ) HSP 1 Score: 80.1 bits (196), Expect = 1.2e-15 Identity = 45/80 (56.25%), Postives = 54/80 (67.50%), Query Frame = 0
BLAST of Sed0017903 vs. TAIR 10
Match: AT5G64130.1 (cAMP-regulated phosphoprotein 19-related protein ) HSP 1 Score: 79.7 bits (195), Expect = 1.5e-15 Identity = 46/85 (54.12%), Postives = 54/85 (63.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|