Sed0017890 (gene) Chayote v1

Overview
NameSed0017890
Typegene
OrganismSechium edule (Chayote v1)
DescriptionE3 ubiquitin-protein ligase COP1-like
LocationLG08: 33723932 .. 33736337 (+)
RNA-Seq ExpressionSed0017890
SyntenySed0017890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCGGAGGTTCCATCGGAGGAGCGTTGGTTCCCACCGTCAAGACCGACCCCTCCGCCGCCGACTCCACACCTTCCGCCCCTCCGCCGCCCTCCCTCCCTCCTCCTCCTCCGCCGATGCCGGAGGCGACGGCCGCCGGAGAGGCCAATGCTACCGCGGCTGATCTCAGCTCGGAGGATCTGGATAAGGACATGCTTTGTCCTATTTGCATGCAGATCATCAAGGACGCGTTTCTCACTTCCTGCGGACATAGCTTTTGCTATATGTGCATTTTTACTCACCTGAGGAACAAGAGTGATTGTCCTTGTTGCGCCCATTTTCTCAGGAGTAATTCTATTTTCCCCAATATTTTGCTTGATAAGGTTCGCCGTTTGTTTCTCCTGATCTGTTTTTTGGATGATTCTACGTTTTCGCGATTTCATTTGTTTTTTCTCCGGCGTCTTGTTTGATTTGGCTTGGTTACTTATGATCGATTGAATTGGATCCTAATAGTTCCGGTTTGATCATATGAATATTAGTTTGATGGTTATTTTATGATTTTCAGTTGAGCTATTAATCTCGGTTAGGAGTCATTTCATTCTGCGGGAAATTCTCTTTCTGTAATTTCTAACATTGTTGCTGGTCTTCCCTTAGATTTGTAATGTTCTTTATATTCCCAACGAACTGTCTGTCTGTTACAAGGAGTTGGGATCCAAATTTGAAATCTAGAGTGGAGGTTTTCGATATCCTTGGCTAGTTGAACTATGCCCGAATCACATGTATAAGCGGGTACTTAAGCTTTAAGATTTGAGTGGTTTTTTTTGGGAAGCGTCTTGCTATGTTGAAGCTTTGACCTTTTCTCTAACTTTATGTCAAACGACCAGGTCATTATATTTTTGGATTTTTCAATTGTATTCTCGAACCGTGATATTGCAATGCGTCTTCATAGTTACTTGTGCACCAACTTTTGCAGTTGTTAAAGAAAACTGCCGCTCGTCAGATAAAGAATACTACATCCCCATACGGATATCTTCATCAAGCATTACAAAAGGTCAGCACAATTTCTGTTAAAAAAAATCTTCAGAATTTACAACTCATCTTCACCGGAGTAATCATACCCTTGACATAGGATTCGAGGATAATATAATTTTCTTAGTTGACCACCATGCTAGTGATTCTACCGTTACAATTAATGCGTGGATTTGAGTACAAACCTTCTATTATTAATCCTCTTACTATGCCTTCATCGATCTCCCTCAACAAAATGGATTTTCCTTGTTTTCTTTATCAGGGTTGTGACATGTCAATAAAGGATGTGGATGAACTTTTAACCCTCCTTGCTGAGAAGAAAAGAAAAATGGAGCAAGAAGAAGCGGAGACGAATATGCAAATTTTACTTGGATTCTTGTATTGCTTGAGAAAGCAAAAGCTCGAAGAGCTTAACGAGGTCTCTTTTTCTTCAATTGTCATTTTTTTTGTTTCTTGTTTATTAAAAAAATTGTTCGTGAACATCTTTATGTGTTATTGTTAAAATATTAAATGAAGTCTTTTGTGAGGCTTAGATAGATGGTTATCCTATCTGCAATTTAATGGGCTGCATTGTAGCTTGTTAAAGATGATACTGACTAAATCTAATAAAGAGGTCTGTGTACATCATGTTTAGAATTTGAGTAAGTTTAACATTTTTATTTTTGATATCCGTGAGTGTCCGGGTCAGTTTATGCATACATCGCTTCTTCTCGAGTAAATTTAACACTATCAAGTTGGAAATTAACGATAGTTTTATTGGAAGAAATGCAACTGCTTTGATTAATGCCTGAGGTTTAAATATGTAGTCTGAACATAACTAAATTTGTCCGGAGCATCTAATATTCAATTTAGGGAACTCCAATTTTGAGATCATTTTTGTTGATGCACTTCAGAAAGTCGTTGCGCTTTTATTTTCCTTTGTTTTGAACAATGTTCAACTGGTTAAATGAATTAGTTTTATGTCAATACTTTTGCTCGCTTGCAATACATCTATGATTGTGCTAGAAACCACCATGTTCTTAATACAGCCTTATATGTAGCCTGGCCAAGTTCAGTTTACAAGTATGCAGAGGGTATTATTATTAATATTTTCCATAAGAGTATGAGTATGTAAAGGGTAATGTATAACCCGCTTAGTAGAAGTTTGATAGGATCCAGCCCTTGGAGTTTTTAGGAATATTAGTATTAGTATTTATTATTTATTAGTTAATTGCTATTTTAACTGTATTGGGCTTGGGCATATTATTAGTCTTTTATTAAATTAGGGTTTAGGGTTATAAATAGGAAAGGTTAGGTCTTTGTTATTCATCCATTGAATTGTCGTCTTTTGTACTCTGGCTCTTTGAGAGATCATCTCGAGAGATTTATCTTAATAACGTGGTAGATTCTTGATAAGGTTGGGCCTAGGGCTCTATTTAGCCATTACTTGGAGAATAAGTTAGTATTTTGTTATAAATAGATTGGGTTAGGTTAGGGTTTAAGATCCAATTATTGAATGAGTTATTGAGTGATTTATTGTAGGACTCAAGAGATTCTTTTTAGAGGAGAGGTTCAAAGACCTATCAAAACTTGACTTATCTTTATTATTTTACTTTTACTTTTGATATGATCCAAGATCTAGATTATATCAAAAGATAAAAGAATAAAGATAAGCCAAGTTTTGATAGGTCTTGGAACCTCCCCTCTCAAGAGAATCTCTTGAGCTCTACAATAAATCACTCAATAACTCATTCAATAATTGGATCCTAAACCCTAACCTAACCCACTCTATTTATAACAAAATATTAACTTATTCTCCAAGTAATGGCTAAATAGAGCCCTAGGCCCAATCGAACCCTAGGCCCAACCTTATCAATTCTATCATTTTGGTATCAGAGCCGTTTGCAGATCCGAGAATGGTTGCTACGGGGATGTAATCAAGAATGGAGGAACTTGAAGGCACCACCGCCGAATTATTAAAGAATCAGCAAGAATTCGAAACGAAGTTGGAAGCGATGGGAGATCGATTAGATCAAGAGTTGAGACAGATGAATTTAAATATGCAGAAGTTGTTAGAGCGAACTCCAACTCGATTAGCTTAGACAAGGTGGCAGGCGTGGGGTCGAACTCGGCTGGTGCAGGGAAAGGAACCTCGGCGGTGTCTGCGGCCGTCGTGAGCGGCGCGAGCAAATCGACAGCGGGGATGCGGGTCGATGCGGGATGGCGTGAGGGAGCCGATTGGAGCGGGGAAGCGGGTGCAGGTTGGGGCTCGGGTGGTGGCGCGGCCGAGAGGGTTGGCTTCAGCTGGGGCGTAGGTTCCGGGGTGAGCGTAGGCGTGCGCGTTGGCGCCGACGCCAGTGGGGGTGTGGGCGCGGACAGCAGGCGAAGCTGGGGTGCGGGCAGGGCTGACTGGACCAAATCGGTCTGGGTGGGCTAGGTCGGACCGGAGAGAACGATTGATTGGGCCGTTCGACGGGGGAGATTTGGGGGAACCTGATTTCGATCGTCAAGGAAATTCTAGGTTTGACCGATGGGGCAACAGGTTACTAGAAGAGAGGAGGAGGGTGACCATCGGCTATGACAGGCTGTTAGCGCATGACGATTGGAACGATCGGACCGAAATTGGGTTGACAATTTACCGAGACCGGAGTTTGATCAAATGGGAGATCCTAGGGTCGATAGGAGGGGAAACAAGGTTCTGAAGGAGAGGAGGGTGCGTATCGGCTATGATAGGCCGTTGACGCATGACGGTTGGAACTATCGTGGTTGGGGTGACAATTTCCGCAATACGGGACAAGAATTTTGGCGGAGAGGAAAAGAAAGATGTGAACGGGGAGGTCAGAGAGCAGGAGGAAGGGAGGGACCGGGATGTGACAGGAGGTTTAGAAAATTGGAGATGCCGTTATTCAGGGGTCTTGCTGATGAGGATCCGGTGGGATGGTTGAGCCGGGTCGAACGTTATTTCCTGGTAAACAAGCTGACTGAATATGAAGGGGTTGAGGCGGCGGGGTTATGTTTAGAAGGGGAGGCATTGGAGTGGCTTCAGTATGAGGAGGACCGTGCTTTTTTTCGTTCATGGAACGAATTCAAAGACGGGTTGTTGGAGTGTTTTCAACCGACGACTCAGGAAAATAAGTATGCCAACTTCATGAGTTTGAAGCAAATGGGCAGGGTGAAGGAATATCGTAGGATCTTTGAGCGCTTTGCTAAGGGAATGCGCGATACCAGTGTGAGTGCATTGGAGGGGAAGTGGGAAAGTGGACTGAAAGAGGAGATACAGAGCGCGATGCGTAAACTACGACCAGTGGGCATCAAAGAGAAAGTGTTTATGGCCCAAGTGATTGATGATGATTTTGCTTTTCAGGCTGCCCAAAACGCGGGAAGTACTTCTGCAACGGTCAAGGCTAAAGCAGGAACGATTGTATCGGGAACTGGAAGCACAAAGACTTTTTCCCACAGGATTACAACCGTTCACCCGGCGTCTTGGAAAAAAACTCATTGAAGCCGAAATTCGAGCAAGGAAGGACAAAAGGTTATGCTTCCGCTGTGATGAACGATTTGTCCCGAGACATCGTTGTCAAAAGAAAGAACTCCAGAACTTGGATGTGTGGGTCGTCCGAGATGCGCACGATTACCAAGATGATGATGTGACAGACTTTTCACTAGAAGACGGAGCTGCAAAGATGGCATCGGACTGGAACACCTTGAGGACAAGGTGGCTCTTGGGGGGGAAAGTATTGATACGATCCGGCCCTTGGAGTTTTTAGGAATATTAGTATTAGTATTTATTATTTATTAGTTAATTGCTATTTTAATTGTATTGGGTTTGGACATATTATTAGTCTTTTATTAATTAGGTTAAATTAGGGTTTAGGGTTATAAATAGGAGAGGTTAGGTCTTTGTTATTCATCCATTGAATTGTCGTCTTTTGTACTCTGGCTCTTTGAGAGATCTTCTCGAGAAATTTATCTTAATAAAATGGTAGATTCTATCAAAGTTCTGGTTGAGTTTTGGTGCATGCATAGATTATCTTCTCATTATAATATAGATACGGATGATCTCCCATTGATCCCGAATATCTTTTTTTAATCTAATTCATTATTTATTTATTTTCCTATTATAGATACAAGCTGATCTTAACTACATTAAGGAAGATATTAGCTCCGTAGAGAAACAAAGATTGGAACTATATAGGTCCAAAGAAAGGTACTCGGGGAAAATGAAAATGCTGGTTGATGACTCTGTATCTACAAAATCACGGTCTTCATTAATCGACAAACATGTAAATGGAATTAATTGTGGAACCCAAAGGTTACAAGGCTGGATGAATTCTGGGAATTCACCCAATGATAGAGTTGATGCAAAGATTCAAATAGGTTCCCAGGGATCACTTAGAAAAGATGCTCATTGTAGTTCAGATTTACATTCTGTTGCTCAATTTGGATCAGCCATAGCAAACAAAAGGCGGGTCCATACACAGGTAAATCTTTTATTTGAATTCCACTTCTACGGAATTGCTTTTACAATTGTCTTTTCCAGTCTGGCTACTTAGTCAAACTCAAATTAGCATCTTTTCTGTAAACAAATTCTCAATGATTTGGATATAGATTATTTGACCTTCTTAATGAGTATTCGCTGAATTAATAATCTTGTTTGTTATTGCGAAGATTATAGATATTGGCTTCTTGGCTCCAGTAGAGTACAATTTTGCAAATATCATCTTGACTCTTGAGTTAACTAATTCTTGTGGTATTCCAATCACTGAATACGCTGGTATTCTATTGTTTAGTTGAACCCTCTCAAAAGATATGTTTATATTTTCATTTTTCCACTCTTTCAAAGTAAGAGGCCTCATTTCTATTTGTTTCCTTGCTGTATTTTATATTGACCGGTGATATTGGGGATCGTTAGTTGTCATCATTATGGTTTTGCTAGGTGCTTGTGGAATAAATTTCTTTTTGAACTTAAAGTACATTTTGCATTTCCTTAGGTCGAGTCTTTTTTTTGGGTAGGACTCCTGAAAACAGCATTATCTTTTAAGTATATTGTTCAATTTCAGCTATTGTGAGTGAAGGCTTTGTGGATTAACAGGCCAGTTTTTTTTTGGAGTTGTAAGTAATGCTTAGGTAAAAGTGCCTACTTTTTTATTTTTATTTTTTTGTTGTTGGTACTAGGAATGTCAAGTCATTTAGTTCTGGTTATGTTGAAAGTTTATGTTGTTTGTGATTTTCTTGTACTGTTGATTCTTTTTTAGTTGCTTAGCCTTTTTATTAATATTTTTGTTCTGTTTTCGTTTCAGTAGTAAAAATGTGTAGTGCTTCTGGTTTGGGTTAAAAGTAGATTTCGGCCCTTAAAAGGGTCAGGGACTAGGAAAGAACTTTTCACCTAGAGCATTAAGGAAATGAATGAGGAAATTATGTACACAATGTCACAATCAGAAAAGTGTGACCAGCAGATTTGTTTTTGAACAAGCGCCAGTCCCTAGGCCAGGCACCGGGAGACATCGAAGAAGACCAGCAGATTAGGAAAGTATTCTTCAAAATTTACTGATGACATCATATTTTTAAAGCTAGGAGACATCTAGTTTGAGGCGGCCATATTGAAACTTAGGAAAATTTTGGCTTTTCTATGTTGATCAAGTCTATCTAGTGTTGCTATTATGTCAACCGATCATTAATTGAAAAATAGCATTGTTTACTAGAAATAGAGTTTCTATATAACTGTGTGATTCAATTATTGACATTTAGTTCAATGAATTCGTTCCATATAGTTTAATGAATTGCAAGACTACTATCTGCAAAAACGACGAAATTGGAGGAAACAAATGCTTAAACAAGAAGATGGAGATATAAAGTTCAGCCGTGGAGAAAGTTATAGTCCAGCTCTTGAAGATTTTCAGTCTGTACTAACTTCTTTCATGCGATATAGGTACAATTGTTTACATATTTTGACTATTTGACATTGGTTTCTCATGTGAGCATTGACTAATTATTACTTCTGTCGTATCACACGGTCTATGGATTAGCCGATTGAGAGTCATTGCAGAACTTCGGCATGGTGATCTTTTTCATTCTGCAAACATTGTATCGAGGTGAGTGATCGCTAGACACATTATACATTGATACATTAAACTCCTTTGGAGATCCTGCATAGTGATTGGGAGTTTCTTACAAGGCTTTTGATTTAATCTTTATACACTTTAATTTTGACATCATGGTATGATCGATTGAGCTGAGAGTAGATATCTGGTTTGATAAAAAATACGTTTAGTCGATTTCGAAGTTTAAATTTTCCTAAGCTAACCTCGAACCTTTTGTTTTCAACTCATTATTGATGAACTTAATTGTTAGGGATCTTGAAATAGTGAGATTCTCGTCATTCATTTTTATTTTCATGTTCTTTGAACCTTTTTCTATCATCATCTGTCTTTCACTGAGATAAGTGCACATCCATTTTCCATAGGATTTATTCGAGTTTTGAAAAATTGGAAATGATAATAATCATGTCATTCTTGTTTCAGTATAGAGTTTGATCGTGATGATGAGTTCTTTGCAACTGCTGGTGTTTCACGTTGCATCAAGGTTTTTGAGTTTAGCTCGGTAAGCATTTGATGGTTATTCATTGGAACACTAAAATGGTATTAGTTGTTAGAAAGTCACGTAAGATATACTGTCAATGGTGGTGACACTGTGATTTCATGTATTAAATATTCATTTTGCTTTACAGTGAACCATTGCTACTTTTTGAACAAGAAACGAGAATTCATTGATAAGCAAAAAATGGGTTAAAATACAACCAACCAAAGGCCAACAAGAGTAGACTCAGGAAGGAAAATAAAATAAAAACCAAAGAAAAAAAAAAAAAAAATCCAAAAATCACAGCCTCTGCAGAAGAGCCTCCAATCGTTTCAAATGTCATTACGAGAATAAGCAACAAAATGATTACTAGACAATAGATACCGAGAAGCTTCAATATCAATAAGTTCAAGTCTGTCTATCCAAATAAGAGAGACTTGTCCTAATGTCTCTAAGGGGTGGCGCAGTGGTTGAAGATTTGGGCTTTGAGAGTATGCTTCTTTCAAAGTCCCGAGTTCGAGTCTTTTCTGTACAGTACTCCTTCGATGTCTCCGGTGCCTGGCTTAAGGATGGGCTGATTACCTTTGTTTGAAAAAAAACAAGAGAGACTTGTCCTTTGGATTCTTTTCAACCAAAAAATAGGAGAGAATAGCTTTGGAAGCATTAAACCGTAATAAATTTGCTTTGATGAGAAACTAGCCACAGAGAAGGTGAAGAATACAAAGACCCCACACGGGTGAGATAAGGTAGGGCATTCCAACAATGACGAAAGGAAATGCAAAGAAATAATGAATGATTCTGATCTTCGTTGGACTTGATTCTGTCATTTATCTTGTACTTTTTTGGAGCCACAAACTCCCCTCATTTTGTGATTATAGCTTATGAACTTTACGTGCACATTGGTGGAGGAGTTTTCTGTAATTATCATTGATTGGTCTTTTGCAACTATTTCATATATCAATGAAAAGTTTTGTATCTTATAAAAAATAATTAATAAGTTTAAAACGAACAAGATTAATTTTTTAATACCATTATAAATGACTATAGTACATATACTTTTGTTCAAAATACTATTTATTTCTGCTTAAGATAAACTATTTATTTATGTTATTTATTGAAATAATTTTATTTGATTAAATTTGAAAGAAGAAATCATTTATTTTTGTAATTCATATATGATAAATTTTTTAATACATTAACCTTTTTAAATACTAAGTTCTTAAATTGTAATATGAGTTAGTTTTTAAAACATGTTTTTCCTTCTCTTCAAATAATATGATTATTTATATTTTTGAGCTACTCATAAAAAAGTAAGTTACAAAGTATTTTAATTATATGTTAATGATTATAGTATTTTTGTTAACAATGATTTGTATTCAAATATTAATTAGCAATTATAAAAAATGATGAGAAATTAACTTTTAATTTCCTTTTGTAACTTTTCATTCATCAATGAAAGTTTTCTGTTTCCTATTAAAAAAAATGATGAGAAATTTATGCATAAAAATATAAACTTGATAATTAAGGAATAAATTATTCAAATTTAAATGGAGAGGGAGGTAGGAGCGACCGAGATGAGGTGAGGTGAAGAGAACAGAAGGTAGTGAAGTTGTGAGGCCCACATGGGGGAGTTGGATGTGTCAATAAGTTTGTGAGGCACCGTAGGAAGTTGGAGTTGAAGATAATAAATTTTTGGGGCTCACAATTGGAGTTAAAATATTCTTCGCACAAATGATGAGTAAGTTTGTGGGACTCACAATTACAATTTTGGTAGTAGATTACTACAACAATAAAAGTAGAGGGTTAGGCACGACTTAGTAAGATGATCGTACTTGAAGAGAATATGTTTTATTGGTTGTACAACGGCCATAGTCCTTGAGTTCTAAAGCACACCTGACGTACGGCGTTTTTTTAATACATATTTTTTTTAAAGGACTTGGTATTTAATTTAATCAAATAATAGTGGGTTGGATCCTAACATTAAATGAGGGTGTTGCTTTATATTTTTCTTGAATTAATCCTGAAACTTAGTAAGTTAATATAACAATTATGGTTTTTTAAATAGTCAATTACGTGTTAAATATTAAAGACTAGATATTTTTTAGTAGACGTGCACAGCTTGAAAATATTGGTTAATTTTACTTATATCTAAGGTTTGCATTGATCATCCACGAGGGATTATCAATATTACTATTTACTTGCTATTTCCAGGTAGTAAATGAACCAGCAGATGTTCACTTTCCCGTTGTTGAGATGTCTACTCGGTCCAAACTTAGCTGCTTGAGCTGGAATAAATACACAAAAAATCATATTGCTAGTAGTGATTATGAGGGGATAGTAACTGTCTGGGATGTAAATACTCGTCAGGTGGTGGTTCATTATCTATTGAAAGTTTTCTTCGCTTGTTAATTATCTCCATTATTGGGTCATATTTAACTTTTTTAACAGGCTCTTTTCCTTTTAGAGTGTTATGGAGTATGAAGAACATGAAAAGCGTGCTTGGAGTGTAGATTTTTCACGTTCTGAACCTTCTATGCTTGTATCTGGCAGCGATGACTGTAAGGTAACTGAAGAAAACACTCCTTTTGAGTTGGTGCAAATTATTTATTTTTGAAATTGGATTTGTGATTGATGGACTAGAAATTGGGACCAACCAGCAATTCTCCATTTTTTGTGAGGCATAATTTTCAACTTTTTTAATCTAAGGCTCTATAGCAGAGTCATATCCGTCAATAAGCGTTATAATTTTAGATCTGTACTGAAACTCATACGAGTAAACATGATTTGTAGAAATTTCCCAATTCAATAGAGCATCGCTTGGTCAGTTCTGGGCGATCTTGCAAAATAAGTTATATCCCCACTTAAAACCAAGTTACTACCCAACAGCCAAACCTTGGTGATTTCTTCAGATACGCCACTGAAGAGATAACTCTCCTCTACTTTTCTTCGAGGATTGAAGTGCCCATGGAAGGAAACAAGGCTTTGGCCTCAGCTCTTGACTCCCCTGCATTGATTGAAGATGGATTTGGAATGCCTTGACAACTGTTCCGGACTACCCTGAAGTGATTGAAGATGGTTCTCAGACTTAAGTGGATTTGGACTTTCATTCGGCTACTCTCCTCCCCATCGTTATCTCTTGGCTTACATAACGATGCCCTTCCTTCATCCAAAAAGTATGCTGTCACCAAGAAGAAAGGCAAGGGTACCTGAGAACTGATCGATCTTTCATCATCAGTGCAATACAATACCAAGGCTTCATCTTCTTGAAGGTTTCTTGAGCCACAAGCCTGACCACAAATACTCTCTCTGTTTTCCTTATAGGTTTTGGTTAAGAACATTCTTAGATGTTCTTATTTGAATCCTTGTTGTTGAAATTTTGTTTCTGGAATTGTTTTTTGTGCTATCTATGGCCTAATGATTGACTTCCCCCCTCTTTTCTCCCATCTCTCTTCGGTTCTTTGTTTTGGTTAAGAAACTGTTTCATTAATATGATGAAATATGGGTCCATTGGACCATAACAGGATACAGAGAGAAAGGGGAGGAGATGGATAAAGGAGGGAGGAGAAGGGATTGGGGCCAAACATACACCTGTCAAGGATCAAAAGAGATCCATAGCTACAAAAACCTGCAAACAACAAACAGGAGCAAGTTGGACAACAATCTACTAGAAAGATTTAAAATTGAACAGAAAAAGAGATGTTCGATAACAGAATTATGTGTTTTTTGATAGAGGCTGTAATGTTCATTCTATCAATGAGTTTCTGATAAAAAAAACAAAAATGCGTAGTTACTAAACTAACACTAGGTTCTTTCCCGTAACTCTTTGAGATGATTCTCAGGTCCTATTTTGTCTTTCTTGTAACAGGTCAAAATCTGGTGCACAAGGCAAGAAGCTAGCGTGTTTAACATTGATATGAAAGCAAATGTTTGCTCTGTCAAGTACAACCCAGGATCTAGCTTATACGTGGCTGTACGTCTATTTTGCTCTCTTTTTCACGAATGTCATAAACTCTTACCTGAATTTATGTGTGTGTGTGATAATTCCTTTCAACCAAAATTTTTCTGATCCTGATCAACCTTTGTGTGCATAGCCCGGAAAATTCATCTCTCTTCTTAATACTTGAGCATTTTCAGGTGGGTTCCGCTGATCATAACATCCACTACTACGACTTGAGAAATATCAGCCAGCCTCTGCATGTTTTTAATGGCCATAAGAAAGCTGTTTCTTATGTGAAGTTCTTGTCGAACAATGAACTCGCTTCTGCTTCGACTGACAGCACTCTACGATTATGGGATGTAAAGGAAAATCTACCTGTGAGTTTTCTTGATATATTGTCTATTCACATCCAAATTGGAGTAAATCTTCATGAAAAGCATGCTCCTTTTTCTCTATTTTCGTCACTATCGACTCTTTCTTGGATATTCTTTCTCTTGATTCATCTCTTTATTATTTCAGCTGTGTGCATATCGAGGACATACAAATGAGAAGAATTTCGTGGGACTAACAGTAAATTGTGAATACATAGCATGTGGCAGTGAAACTAATGAAGTCTACATTTATCACAAGGTTATCATCATTCATTTTTCCATCACCTTCCTATTTTCTGCTACATTTTTCTTATGATAAAGATGATCAGTTGAGAACAAGTTGTTAAAAACTGAATTTACTCGCAGGCAATATCGAAACCCATGGCTTGGAATAGGTTTAGTTCAGATTCGGAAGATAACGACGAAGATGCAGGTTCATATTTCATAAGCGCTGTTTGTTGGAAGAGTGATAGCCCCACAATTTTAACAGCAAACAGCCAAGGAACAATAAAAGTTCTGGTACTTGCACCCTGA

mRNA sequence

ATGGGCGGAGGTTCCATCGGAGGAGCGTTGGTTCCCACCGTCAAGACCGACCCCTCCGCCGCCGACTCCACACCTTCCGCCCCTCCGCCGCCCTCCCTCCCTCCTCCTCCTCCGCCGATGCCGGAGGCGACGGCCGCCGGAGAGGCCAATGCTACCGCGGCTGATCTCAGCTCGGAGGATCTGGATAAGGACATGCTTTGTCCTATTTGCATGCAGATCATCAAGGACGCGTTTCTCACTTCCTGCGGACATAGCTTTTGCTATATGTGCATTTTTACTCACCTGAGGAACAAGAGTGATTGTCCTTGTTGCGCCCATTTTCTCAGGAGTAATTCTATTTTCCCCAATATTTTGCTTGATAAGTTGTTAAAGAAAACTGCCGCTCGTCAGATAAAGAATACTACATCCCCATACGGATATCTTCATCAAGCATTACAAAAGGGTTGTGACATGTCAATAAAGGATGTGGATGAACTTTTAACCCTCCTTGCTGAGAAGAAAAGAAAAATGGAGCAAGAAGAAGCGGAGACGAATATGCAAATTTTACTTGGATTCTTGTATTGCTTGAGAAAGCAAAAGCTCGAAGAGCTTAACGAGATACAAGCTGATCTTAACTACATTAAGGAAGATATTAGCTCCGTAGAGAAACAAAGATTGGAACTATATAGGTCCAAAGAAAGGTACTCGGGGAAAATGAAAATGCTGGTTGATGACTCTGTATCTACAAAATCACGGTCTTCATTAATCGACAAACATGTAAATGGAATTAATTGTGGAACCCAAAGGTTACAAGGCTGGATGAATTCTGGGAATTCACCCAATGATAGAGTTGATGCAAAGATTCAAATAGGTTCCCAGGGATCACTTAGAAAAGATGCTCATTGTAGTTCAGATTTACATTCTGTTGCTCAATTTGGATCAGCCATAGCAAACAAAAGGCGGGTCCATACACAGTTTAATGAATTGCAAGACTACTATCTGCAAAAACGACGAAATTGGAGGAAACAAATGCTTAAACAAGAAGATGGAGATATAAAGTTCAGCCGTGGAGAAAGTTATAGTCCAGCTCTTGAAGATTTTCAGTCTGTACTAACTTCTTTCATGCGATATAGCCGATTGAGAGTCATTGCAGAACTTCGGCATGGTGATCTTTTTCATTCTGCAAACATTGTATCGAGTATAGAGTTTGATCGTGATGATGAGTTCTTTGCAACTGCTGGTGTTTCACGTTGCATCAAGGTTTTTGAGTTTAGCTCGGTAGTAAATGAACCAGCAGATGTTCACTTTCCCGTTGTTGAGATGTCTACTCGGTCCAAACTTAGCTGCTTGAGCTGGAATAAATACACAAAAAATCATATTGCTAGTAGTGATTATGAGGGGATAGTAACTGTCTGGGATGTAAATACTCGTCAGAGTGTTATGGAGTATGAAGAACATGAAAAGCGTGCTTGGAGTGTAGATTTTTCACGTTCTGAACCTTCTATGCTTGTATCTGGCAGCGATGACTGTAAGGTCAAAATCTGGTGCACAAGGCAAGAAGCTAGCGTGTTTAACATTGATATGAAAGCAAATGTTTGCTCTGTCAAGTACAACCCAGGATCTAGCTTATACGTGGCTGTGGGTTCCGCTGATCATAACATCCACTACTACGACTTGAGAAATATCAGCCAGCCTCTGCATGTTTTTAATGGCCATAAGAAAGCTGTTTCTTATGTGAAGTTCTTGTCGAACAATGAACTCGCTTCTGCTTCGACTGACAGCACTCTACGATTATGGGATGTAAAGGAAAATCTACCTCTGTGTGCATATCGAGGACATACAAATGAGAAGAATTTCGTGGGACTAACAGTAAATTGTGAATACATAGCATGTGGCAGTGAAACTAATGAAGTCTACATTTATCACAAGGCAATATCGAAACCCATGGCTTGGAATAGGTTTAGTTCAGATTCGGAAGATAACGACGAAGATGCAGGTTCATATTTCATAAGCGCTGTTTGTTGGAAGAGTGATAGCCCCACAATTTTAACAGCAAACAGCCAAGGAACAATAAAAGTTCTGGTACTTGCACCCTGA

Coding sequence (CDS)

ATGGGCGGAGGTTCCATCGGAGGAGCGTTGGTTCCCACCGTCAAGACCGACCCCTCCGCCGCCGACTCCACACCTTCCGCCCCTCCGCCGCCCTCCCTCCCTCCTCCTCCTCCGCCGATGCCGGAGGCGACGGCCGCCGGAGAGGCCAATGCTACCGCGGCTGATCTCAGCTCGGAGGATCTGGATAAGGACATGCTTTGTCCTATTTGCATGCAGATCATCAAGGACGCGTTTCTCACTTCCTGCGGACATAGCTTTTGCTATATGTGCATTTTTACTCACCTGAGGAACAAGAGTGATTGTCCTTGTTGCGCCCATTTTCTCAGGAGTAATTCTATTTTCCCCAATATTTTGCTTGATAAGTTGTTAAAGAAAACTGCCGCTCGTCAGATAAAGAATACTACATCCCCATACGGATATCTTCATCAAGCATTACAAAAGGGTTGTGACATGTCAATAAAGGATGTGGATGAACTTTTAACCCTCCTTGCTGAGAAGAAAAGAAAAATGGAGCAAGAAGAAGCGGAGACGAATATGCAAATTTTACTTGGATTCTTGTATTGCTTGAGAAAGCAAAAGCTCGAAGAGCTTAACGAGATACAAGCTGATCTTAACTACATTAAGGAAGATATTAGCTCCGTAGAGAAACAAAGATTGGAACTATATAGGTCCAAAGAAAGGTACTCGGGGAAAATGAAAATGCTGGTTGATGACTCTGTATCTACAAAATCACGGTCTTCATTAATCGACAAACATGTAAATGGAATTAATTGTGGAACCCAAAGGTTACAAGGCTGGATGAATTCTGGGAATTCACCCAATGATAGAGTTGATGCAAAGATTCAAATAGGTTCCCAGGGATCACTTAGAAAAGATGCTCATTGTAGTTCAGATTTACATTCTGTTGCTCAATTTGGATCAGCCATAGCAAACAAAAGGCGGGTCCATACACAGTTTAATGAATTGCAAGACTACTATCTGCAAAAACGACGAAATTGGAGGAAACAAATGCTTAAACAAGAAGATGGAGATATAAAGTTCAGCCGTGGAGAAAGTTATAGTCCAGCTCTTGAAGATTTTCAGTCTGTACTAACTTCTTTCATGCGATATAGCCGATTGAGAGTCATTGCAGAACTTCGGCATGGTGATCTTTTTCATTCTGCAAACATTGTATCGAGTATAGAGTTTGATCGTGATGATGAGTTCTTTGCAACTGCTGGTGTTTCACGTTGCATCAAGGTTTTTGAGTTTAGCTCGGTAGTAAATGAACCAGCAGATGTTCACTTTCCCGTTGTTGAGATGTCTACTCGGTCCAAACTTAGCTGCTTGAGCTGGAATAAATACACAAAAAATCATATTGCTAGTAGTGATTATGAGGGGATAGTAACTGTCTGGGATGTAAATACTCGTCAGAGTGTTATGGAGTATGAAGAACATGAAAAGCGTGCTTGGAGTGTAGATTTTTCACGTTCTGAACCTTCTATGCTTGTATCTGGCAGCGATGACTGTAAGGTCAAAATCTGGTGCACAAGGCAAGAAGCTAGCGTGTTTAACATTGATATGAAAGCAAATGTTTGCTCTGTCAAGTACAACCCAGGATCTAGCTTATACGTGGCTGTGGGTTCCGCTGATCATAACATCCACTACTACGACTTGAGAAATATCAGCCAGCCTCTGCATGTTTTTAATGGCCATAAGAAAGCTGTTTCTTATGTGAAGTTCTTGTCGAACAATGAACTCGCTTCTGCTTCGACTGACAGCACTCTACGATTATGGGATGTAAAGGAAAATCTACCTCTGTGTGCATATCGAGGACATACAAATGAGAAGAATTTCGTGGGACTAACAGTAAATTGTGAATACATAGCATGTGGCAGTGAAACTAATGAAGTCTACATTTATCACAAGGCAATATCGAAACCCATGGCTTGGAATAGGTTTAGTTCAGATTCGGAAGATAACGACGAAGATGCAGGTTCATATTTCATAAGCGCTGTTTGTTGGAAGAGTGATAGCCCCACAATTTTAACAGCAAACAGCCAAGGAACAATAAAAGTTCTGGTACTTGCACCCTGA

Protein sequence

MGGGSIGGALVPTVKTDPSAADSTPSAPPPPSLPPPPPPMPEATAAGEANATAADLSSEDLDKDMLCPICMQIIKDAFLTSCGHSFCYMCIFTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTAARQIKNTTSPYGYLHQALQKGCDMSIKDVDELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLNYIKEDISSVEKQRLELYRSKERYSGKMKMLVDDSVSTKSRSSLIDKHVNGINCGTQRLQGWMNSGNSPNDRVDAKIQIGSQGSLRKDAHCSSDLHSVAQFGSAIANKRRVHTQFNELQDYYLQKRRNWRKQMLKQEDGDIKFSRGESYSPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKNHIASSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMKANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTLRLWDVKENLPLCAYRGHTNEKNFVGLTVNCEYIACGSETNEVYIYHKAISKPMAWNRFSSDSEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP
Homology
[Close]
BLAST of Sed0017890 vs. NCBI nr
Match: XP_022142505.1 (E3 ubiquitin-protein ligase COP1-like [Momordica charantia])

HSP 1 Score: 1249.6 bits (3232), Expect = 0.0e+00
Identity = 629/696 (90.37%), Postives = 656/696 (94.25%), Query Frame = 0 

Query: 1   MGGGSIGGALVPTVKTDPSAADSTPSAPPPPSLPPPPPPMPEATA----AGEANATAADL 60
           MGGGS+   LVPTVKT+PSAADST   PPPP LPPPPPP PEA A    AGE NATA++ 
Sbjct: 1   MGGGSM-APLVPTVKTEPSAADSTAPPPPPPPLPPPPPPPPEAMAAELEAGELNATASEA 60

Query: 61  SSEDLDKDMLCPICMQIIKDAFLTSCGHSFCYMCIFTHLRNKSDCPCCAHFLRSNSIFPN 120
           +SEDLDKDMLCPICMQIIKDAFLT+CGHSFCYMCI THLRNKSDCPCC HFLRSNSIFPN
Sbjct: 61  NSEDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCGHFLRSNSIFPN 120

Query: 121 ILLDKLLKKTAARQIKNTTSPYGYLHQALQKGCDMSIKDVDELLTLLAEKKRKMEQEEAE 180
           ILLDKLLKKT+ARQIK TTSP+GYLHQALQKGCDMSIK+++EL+TLLAEKKRKMEQEEAE
Sbjct: 121 ILLDKLLKKTSARQIKKTTSPFGYLHQALQKGCDMSIKELEELVTLLAEKKRKMEQEEAE 180

Query: 181 TNMQILLGFLYCLRKQKLEELNEIQADLNYIKEDISSVEKQRLELYRSKERYSGKMKMLV 240
           TNMQILLGFLYCLRKQKLEELNEIQADL+YIKEDISSVEKQRLELYRSKERYSGKMKMLV
Sbjct: 181 TNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLV 240

Query: 241 DDSVSTKSRSSLIDKHVNGINCGTQRLQGWMNSGNSPNDRVDAKIQIGSQGSLRKDAHCS 300
           DD+VSTKSRSSLIDKH NGINCGTQR QGWM+SGNS N R D KIQ+GSQG LRKDA+C 
Sbjct: 241 DDTVSTKSRSSLIDKHGNGINCGTQRSQGWMSSGNSANPRADVKIQLGSQGPLRKDAYCG 300

Query: 301 SDLHSVAQFGSAIANKRRVHTQFNELQDYYLQKRRNWRKQMLKQEDGDIKFSRGESYSPA 360
           SDLHSVAQ G A+ANKRRVHTQFNELQD YLQKRRNWRKQ+ KQED D KF+ GESY+PA
Sbjct: 301 SDLHSVAQSGLAVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDTKFNSGESYNPA 360

Query: 361 LEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSRCIKVFE 420
           L+DFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSRCIKVFE
Sbjct: 361 LDDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSRCIKVFE 420

Query: 421 FSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKNHIASSDYEGIVTVWDVNTRQSVMEY 480
           FSSVVNEP DVHFP VEMSTRSKLSCLSWNKYTK+HIASSDYEGIVTVWDVNTRQSVMEY
Sbjct: 421 FSSVVNEPTDVHFPAVEMSTRSKLSCLSWNKYTKSHIASSDYEGIVTVWDVNTRQSVMEY 480

Query: 481 EEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMKANVCSVKYNPGSSL 540
           EEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQE S+FNIDMKANVCSVKYNPGSSL
Sbjct: 481 EEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQENSLFNIDMKANVCSVKYNPGSSL 540

Query: 541 YVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTLRLWDVKE 600
           YVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTLRLWDVKE
Sbjct: 541 YVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTLRLWDVKE 600

Query: 601 NLPLCAYRGHTNEKNFVGLTVNCEYIACGSETNEVYIYHKAISKPMAWNRF-SSDSEDND 660
           N+PLC YRGHTNEKNFVGLTVN EYIACGSETNEV+IYHKAISKPMAW+RF SSD EDND
Sbjct: 601 NMPLCVYRGHTNEKNFVGLTVNSEYIACGSETNEVFIYHKAISKPMAWHRFSSSDLEDND 660

Query: 661 EDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 692
           EDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP
Sbjct: 661 EDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 695

[Close]
BLAST of Sed0017890 vs. NCBI nr
Match: XP_038894733.1 (E3 ubiquitin-protein ligase COP1-like [Benincasa hispida])

HSP 1 Score: 1237.6 bits (3201), Expect = 0.0e+00
Identity = 628/702 (89.46%), Postives = 654/702 (93.16%), Query Frame = 0 

Query: 1   MGGGSIGGALVPTVKTDPSAADS----TPSAPPPPSLPPPPPP-----MPEATAAGEANA 60
           MGGGSI GALVPTVK +PS  DS    TP+ PPPP  PPPPPP     MP     G+ANA
Sbjct: 1   MGGGSI-GALVPTVKPEPSTLDSTASPTPTPPPPPPPPPPPPPPPSDLMPPQFEPGDANA 60

Query: 61  T--AADLSSEDLDKDMLCPICMQIIKDAFLTSCGHSFCYMCIFTHLRNKSDCPCCAHFLR 120
              A+  +++DLDKDMLCPICMQIIKDAFLT+CGHSFCYMCI THLRNKSDCPCCAHFLR
Sbjct: 61  AAPASQSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCAHFLR 120

Query: 121 SNSIFPNILLDKLLKKTAARQIKNTTSPYGYLHQALQKGCDMSIKDVDELLTLLAEKKRK 180
           SNSIFPNILLDKLLKKT+ARQIK +TS +GYLHQALQKGCDMSIKD++ELLTLLAEKKRK
Sbjct: 121 SNSIFPNILLDKLLKKTSARQIKKSTSQFGYLHQALQKGCDMSIKDLEELLTLLAEKKRK 180

Query: 181 MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLNYIKEDISSVEKQRLELYRSKERYS 240
           MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADL+YIKEDISSVEKQRLELYRSKERYS
Sbjct: 181 MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYS 240

Query: 241 GKMKMLVDDSVSTKSRSSLIDKHVNGINCGTQRLQGWMNSGNSPNDRVDAKIQIGSQGSL 300
           GKMKML DD++STKSRSSLIDKH NGIN G QR QGW++SGNSPN R DAKIQ+ SQG L
Sbjct: 241 GKMKMLADDTISTKSRSSLIDKHGNGINSGAQRSQGWVSSGNSPNPRADAKIQLSSQGPL 300

Query: 301 RKDAHCSSDLHSVAQFGSAIANKRRVHTQFNELQDYYLQKRRNWRKQMLKQEDGDIKFSR 360
           RKDA+CSSDLHSVAQ G  +ANKRRVHTQFNELQD YLQKRRNWRKQ+ KQED DIKFS 
Sbjct: 301 RKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSS 360

Query: 361 GESYSPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVS 420
           GESY+PALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVS
Sbjct: 361 GESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVS 420

Query: 421 RCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKNHIASSDYEGIVTVWDVNT 480
           RCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTK+HIASSDYEGIVTVWDVNT
Sbjct: 421 RCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIVTVWDVNT 480

Query: 481 RQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMKANVCSVK 540
           RQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMKANVCSVK
Sbjct: 481 RQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMKANVCSVK 540

Query: 541 YNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTL 600
           YNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTL
Sbjct: 541 YNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTL 600

Query: 601 RLWDVKENLPLCAYRGHTNEKNFVGLTVNCEYIACGSETNEVYIYHKAISKPMAWNRFSS 660
           RLWDVKENLPLC YRGHTNEKNFVGLTVN EYIACGSETNEV+IYHKAISKPMAW+RFSS
Sbjct: 601 RLWDVKENLPLCVYRGHTNEKNFVGLTVNSEYIACGSETNEVFIYHKAISKPMAWHRFSS 660

Query: 661 DSEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 692
           D EDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP
Sbjct: 661 DLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 701

[Close]
BLAST of Sed0017890 vs. NCBI nr
Match: XP_022955102.1 (E3 ubiquitin-protein ligase COP1-like [Cucurbita moschata])

HSP 1 Score: 1234.9 bits (3194), Expect = 0.0e+00
Identity = 627/707 (88.68%), Postives = 653/707 (92.36%), Query Frame = 0 

Query: 1   MGGGSIGGALVPTVKTDPSAADST------------PSAPPPPSLPPPPPPMPEATA--- 60
           MGGGSI GALVPTVK DPSA DST            P  PPP S PPPPPP P   A   
Sbjct: 1   MGGGSI-GALVPTVKPDPSALDSTASPAPQPLPPPPPPPPPPSSSPPPPPPPPLVMAAQL 60

Query: 61  -AGEANATAADLSSEDLDKDMLCPICMQIIKDAFLTSCGHSFCYMCIFTHLRNKSDCPCC 120
            AGEA A+A+D+++EDLDKDMLCPICMQIIKDAFLT+CGHSFCYMCI THLRNKSDCPCC
Sbjct: 61  DAGEAKASASDVNAEDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCC 120

Query: 121 AHFLRSNSIFPNILLDKLLKKTAARQIKNTTSPYGYLHQALQKGCDMSIKDVDELLTLLA 180
           ++F+RSNSIFPNILLDK LKKTAARQIK TTSP+ YLH ALQKGCDMSIKD+DELLTLLA
Sbjct: 121 SNFIRSNSIFPNILLDKFLKKTAARQIKKTTSPFEYLHHALQKGCDMSIKDLDELLTLLA 180

Query: 181 EKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLNYIKEDISSVEKQRLELYRS 240
           EKKRKMEQEEAETNMQILLGFLY LRKQKLEELNEIQADL+YIKEDISSVEKQRLELYRS
Sbjct: 181 EKKRKMEQEEAETNMQILLGFLYYLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRS 240

Query: 241 KERYSGKMKMLVDDSVSTKSRSSLIDKHVNGINCGTQRLQGWMNSGNSPNDRVDAKIQIG 300
           KERYSGKMKMLVDD+VSTKSRSSLIDK+ NG NCG QR QGWM+SGNSPN R DAK  +G
Sbjct: 241 KERYSGKMKMLVDDTVSTKSRSSLIDKNGNGANCGPQRSQGWMSSGNSPNARADAKTHVG 300

Query: 301 SQGSLRKDAHCSSDLHSVAQFGSAIANKRRVHTQFNELQDYYLQKRRNWRKQMLKQEDGD 360
           SQG LRKDAHCSSDLHSVAQ G  IANKRRVHTQFNELQDYYLQKRRNWRKQ++KQED D
Sbjct: 301 SQGPLRKDAHCSSDLHSVAQSGLGIANKRRVHTQFNELQDYYLQKRRNWRKQLVKQEDKD 360

Query: 361 IKFSRGESYSPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFA 420
           +K S GESY+PALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFA
Sbjct: 361 VKLSSGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFA 420

Query: 421 TAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKNHIASSDYEGIVTV 480
           TAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTK+HIASSDYEGIVTV
Sbjct: 421 TAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIVTV 480

Query: 481 WDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMKAN 540
           WDVNTRQSVMEYEEHEKRAWSVDFSRSEP+MLVSGSDDCKVKIWCTRQEASVFNID+KAN
Sbjct: 481 WDVNTRQSVMEYEEHEKRAWSVDFSRSEPTMLVSGSDDCKVKIWCTRQEASVFNIDLKAN 540

Query: 541 VCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASAS 600
           VCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASAS
Sbjct: 541 VCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASAS 600

Query: 601 TDSTLRLWDVKENLPLCAYRGHTNEKNFVGLTVNCEYIACGSETNEVYIYHKAISKPMAW 660
           TDSTLRLWDVKE +PLC YRGHTNEKNFVGLTVN EYIACGSETNEV+IYHKAISKPMAW
Sbjct: 601 TDSTLRLWDVKEYMPLCVYRGHTNEKNFVGLTVNSEYIACGSETNEVFIYHKAISKPMAW 660

Query: 661 NRFSSDSEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 692
           +RFSSD EDNDEDA SYFISAVCWKSDSPTILTANSQGTIKVLVLAP
Sbjct: 661 HRFSSDLEDNDEDASSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 706

[Close]
BLAST of Sed0017890 vs. NCBI nr
Match: XP_023523813.1 (E3 ubiquitin-protein ligase COP1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1234.9 bits (3194), Expect = 0.0e+00
Identity = 628/708 (88.70%), Postives = 655/708 (92.51%), Query Frame = 0 

Query: 1   MGGGSIGGALVPTVKTDPSAADST---------PSAPPPPSLP----PPPPPMPEATA-- 60
           MGGGSI GALVPTVK DPSA DST         P  PPPPS P    PPPPP+P   A  
Sbjct: 1   MGGGSI-GALVPTVKPDPSALDSTASPAPQPLPPPPPPPPSPPPPSSPPPPPLPLVMAAQ 60

Query: 61  --AGEANATAADLSSEDLDKDMLCPICMQIIKDAFLTSCGHSFCYMCIFTHLRNKSDCPC 120
             AGEA A+A+D+++EDLDKDMLCPICMQIIKDAFLT+CGHSFCYMCI THLRNKSDCPC
Sbjct: 61  FDAGEAKASASDVNAEDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPC 120

Query: 121 CAHFLRSNSIFPNILLDKLLKKTAARQIKNTTSPYGYLHQALQKGCDMSIKDVDELLTLL 180
           C++F+RSNSIFPNILLDK LKKTAARQIK TTSP+ YLH ALQKGCDMSIKD+DELLTLL
Sbjct: 121 CSNFIRSNSIFPNILLDKFLKKTAARQIKKTTSPFEYLHHALQKGCDMSIKDLDELLTLL 180

Query: 181 AEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLNYIKEDISSVEKQRLELYR 240
           AEKKRKMEQEEAETNMQILLGFLY LRKQKLEELNEIQADL+YIKEDISSVEKQRLELYR
Sbjct: 181 AEKKRKMEQEEAETNMQILLGFLYYLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYR 240

Query: 241 SKERYSGKMKMLVDDSVSTKSRSSLIDKHVNGINCGTQRLQGWMNSGNSPNDRVDAKIQI 300
           SKERYSGKMKMLVDD+VSTKSRSSLIDK+ NG NCG QR QGWM+SGNSPN R DAK  I
Sbjct: 241 SKERYSGKMKMLVDDTVSTKSRSSLIDKNGNGANCGAQRSQGWMSSGNSPNARADAKTHI 300

Query: 301 GSQGSLRKDAHCSSDLHSVAQFGSAIANKRRVHTQFNELQDYYLQKRRNWRKQMLKQEDG 360
           GSQG LRKDAHCSSDLHSVAQ G  +ANKRRVHTQFNELQDYYLQKRRNWRKQ++KQED 
Sbjct: 301 GSQGPLRKDAHCSSDLHSVAQSGLGVANKRRVHTQFNELQDYYLQKRRNWRKQLVKQEDK 360

Query: 361 DIKFSRGESYSPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFF 420
           D+K S GESY+PALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFF
Sbjct: 361 DVKLSSGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFF 420

Query: 421 ATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKNHIASSDYEGIVT 480
           ATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTK+HIASSDYEGIVT
Sbjct: 421 ATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIVT 480

Query: 481 VWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMKA 540
           VWDVNTRQSVMEYEEHEKRAWSVDFSRSEP+MLVSGSDDCKVKIWCTRQEASVFNID+KA
Sbjct: 481 VWDVNTRQSVMEYEEHEKRAWSVDFSRSEPTMLVSGSDDCKVKIWCTRQEASVFNIDLKA 540

Query: 541 NVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASA 600
           NVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASA
Sbjct: 541 NVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASA 600

Query: 601 STDSTLRLWDVKENLPLCAYRGHTNEKNFVGLTVNCEYIACGSETNEVYIYHKAISKPMA 660
           STDSTLRLWDVKE +PLC YRGHTNEKNFVGLTVN EYIACGSETNEV+IYHKAISKPMA
Sbjct: 601 STDSTLRLWDVKEYMPLCVYRGHTNEKNFVGLTVNSEYIACGSETNEVFIYHKAISKPMA 660

Query: 661 WNRFSSDSEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 692
           W+RFSSD EDNDEDA SYFISAVCWKSDSPTILTANSQGTIKVLVLAP
Sbjct: 661 WHRFSSDLEDNDEDASSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 707

[Close]
BLAST of Sed0017890 vs. NCBI nr
Match: XP_022994223.1 (E3 ubiquitin-protein ligase COP1-like [Cucurbita maxima])

HSP 1 Score: 1234.6 bits (3193), Expect = 0.0e+00
Identity = 626/703 (89.05%), Postives = 653/703 (92.89%), Query Frame = 0 

Query: 1   MGGGSIGGALVPTVKTDPSAADST--------PSAPPPPSLPPPPPPMPEATA----AGE 60
           MGGGSI GALVPTVK DPSA DST        P  PPPPS  PPPPP+P   A    AGE
Sbjct: 1   MGGGSI-GALVPTVKPDPSALDSTASPAPQPLPLPPPPPSSSPPPPPLPVVMAAQFDAGE 60

Query: 61  ANATAADLSSEDLDKDMLCPICMQIIKDAFLTSCGHSFCYMCIFTHLRNKSDCPCCAHFL 120
           A A+A+D+++EDLDKDMLCPICMQIIKDAFLT+CGHSFCYMCI THLRNKSDCPCC++F+
Sbjct: 61  AKASASDVNAEDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCSNFI 120

Query: 121 RSNSIFPNILLDKLLKKTAARQIKNTTSPYGYLHQALQKGCDMSIKDVDELLTLLAEKKR 180
           RSNSIFPNILLDK LKKTAARQIK TTSP+ YLH ALQKGCDMSIKD+DELLTLLAEKKR
Sbjct: 121 RSNSIFPNILLDKFLKKTAARQIKKTTSPFEYLHHALQKGCDMSIKDLDELLTLLAEKKR 180

Query: 181 KMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLNYIKEDISSVEKQRLELYRSKERY 240
           KMEQEEAETNMQILLGFLY LRKQKLEELNEIQADL+YIKEDISSVEKQRLELYRSKERY
Sbjct: 181 KMEQEEAETNMQILLGFLYYLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERY 240

Query: 241 SGKMKMLVDDSVSTKSRSSLIDKHVNGINCGTQRLQGWMNSGNSPNDRVDAKIQIGSQGS 300
           SGKMKMLVDD+VSTKSRSSLIDK+ NG NC  QR QGWM+SGNSPN R DAK  +GSQG 
Sbjct: 241 SGKMKMLVDDTVSTKSRSSLIDKNGNGANCCPQRSQGWMSSGNSPNARADAKTHVGSQGL 300

Query: 301 LRKDAHCSSDLHSVAQFGSAIANKRRVHTQFNELQDYYLQKRRNWRKQMLKQEDGDIKFS 360
           LRKDAHCSSDLHSVAQ G  +ANKRRVHTQFNELQDYYLQKRRNWRK ++KQED DIK S
Sbjct: 301 LRKDAHCSSDLHSVAQSGLGVANKRRVHTQFNELQDYYLQKRRNWRKHLVKQEDKDIKLS 360

Query: 361 RGESYSPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGV 420
            GESY+PALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGV
Sbjct: 361 SGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGV 420

Query: 421 SRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKNHIASSDYEGIVTVWDVN 480
           SRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTK+HIASSDYEGIVTVWDVN
Sbjct: 421 SRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIVTVWDVN 480

Query: 481 TRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMKANVCSV 540
           TRQSVMEYEEHEKRAWSVDFSRSEP+MLVSGSDDCKVKIWCTRQEASVFNID+KANVCSV
Sbjct: 481 TRQSVMEYEEHEKRAWSVDFSRSEPTMLVSGSDDCKVKIWCTRQEASVFNIDLKANVCSV 540

Query: 541 KYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDST 600
           KYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDST
Sbjct: 541 KYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDST 600

Query: 601 LRLWDVKENLPLCAYRGHTNEKNFVGLTVNCEYIACGSETNEVYIYHKAISKPMAWNRFS 660
           LRLWDVKE +PLC YRGHTNEKNFVGLTVN EYIACGSETNEV+IYHKAISKPMAW+RFS
Sbjct: 601 LRLWDVKEYMPLCVYRGHTNEKNFVGLTVNSEYIACGSETNEVFIYHKAISKPMAWHRFS 660

Query: 661 SDSEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 692
           SD EDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP
Sbjct: 661 SDLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 702

[Close]
BLAST of Sed0017890 vs. ExPASy Swiss-Prot
Match: P43254 (E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV=2)

HSP 1 Score: 922.5 bits (2383), Expect = 2.7e-267
Identity = 462/666 (69.37%), Postives = 543/666 (81.53%), Query Frame = 0 

Query: 35  PPPPPMPEATAAGE---------ANATAADLSSEDLDKDMLCPICMQIIKDAFLTSCGHS 94
           P   P P  ++ GE           +  +++ + DLDKD+LCPICMQIIKDAFLT+CGHS
Sbjct: 11  PAVKPDPRTSSVGEGANRHENDDGGSGGSEIGAPDLDKDLLCPICMQIIKDAFLTACGHS 70

Query: 95  FCYMCIFTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTAARQIKNTTSPYGYLHQAL 154
           FCYMCI THLRNKSDCPCC+  L +N ++PN LLDKLLKKT+AR +  T SP     +AL
Sbjct: 71  FCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLDKLLKKTSARHVSKTASPLDQFREAL 130

Query: 155 QKGCDMSIKDVDELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLN 214
           Q+GCD+SIK+VD LLTLLAE+KRKMEQEEAE NMQILL FL+CLRKQK++ELNE+Q DL 
Sbjct: 131 QRGCDVSIKEVDNLLTLLAERKRKMEQEEAERNMQILLDFLHCLRKQKVDELNEVQTDLQ 190

Query: 215 YIKEDISSVEKQRLELYRSKERYSGKMKMLVDDSVSTKSRSSLIDKHVNGINCGTQRLQG 274
           YIKEDI++VE+ R++LYR+++RYS K++ML DD  +  +     +K+  G N  +  ++G
Sbjct: 191 YIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPSTRNAWPH--EKNQIGFNSNSLSIRG 250

Query: 275 WMNSGNSPNDRVDAKIQIGSQGSLRKDAHCSSDLHSVAQFGSAIANKRRVHTQFNELQDY 334
               GN  N +V+ K Q  S G  +KDA   SD  S+ Q   ++A K+R+H QFN+LQ+ 
Sbjct: 251 GNFVGNYQNKKVEGKAQGSSHGLPKKDALSGSDSQSLNQSTVSMARKKRIHAQFNDLQEC 310

Query: 335 YLQKRRNWRKQMLKQEDGDIKFSRGESYSPALEDFQSVLTSFMRYSRLRVIAELRHGDLF 394
           YLQKRR    Q   +++ D    R E YS  L DFQSVLT+F RYSRLRVIAE+RHGD+F
Sbjct: 311 YLQKRRQLADQPNSKQENDKSVVRREGYSNGLADFQSVLTTFTRYSRLRVIAEIRHGDIF 370

Query: 395 HSANIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSW 454
           HSANIVSSIEFDRDDE FATAGVSRCIKVF+FSSVVNEPAD+  P+VEMSTRSKLSCLSW
Sbjct: 371 HSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMSTRSKLSCLSW 430

Query: 455 NKYTKNHIASSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKV 514
           NK+ KNHIASSDYEGIVTVWDV TRQS+MEYEEHEKRAWSVDFSR+EPSMLVSGSDDCKV
Sbjct: 431 NKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 490

Query: 515 KIWCTRQEASVFNIDMKANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGH 574
           K+WCTRQEASV NIDMKAN+C VKYNPGSS Y+AVGSADH+IHYYDLRNISQPLHVF+GH
Sbjct: 491 KVWCTRQEASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGH 550

Query: 575 KKAVSYVKFLSNNELASASTDSTLRLWDVKENLPLCAYRGHTNEKNFVGLTVNCEYIACG 634
           KKAVSYVKFLSNNELASASTDSTLRLWDVK+NLP+  +RGHTNEKNFVGLTVN EY+ACG
Sbjct: 551 KKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLACG 610

Query: 635 SETNEVYIYHKAISKPMAWNRFSS-DSEDNDEDAGSYFISAVCWKSDSPTILTANSQGTI 691
           SETNEVY+YHK I++P+  +RF S D +D +E+AGSYFISAVCWKSDSPT+LTANSQGTI
Sbjct: 611 SETNEVYVYHKEITRPVTSHRFGSPDMDDAEEEAGSYFISAVCWKSDSPTMLTANSQGTI 670

[Close]
BLAST of Sed0017890 vs. ExPASy Swiss-Prot
Match: P93471 (E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1)

HSP 1 Score: 895.6 bits (2313), Expect = 3.6e-259
Identity = 455/666 (68.32%), Postives = 535/666 (80.33%), Query Frame = 0 

Query: 28  PPPPSLPPPPPPMPEATAAGEANATAADLSSEDLDKDMLCPICMQIIKDAFLTSCGHSFC 87
           P  P++  P P    +T    A       +  DLDKD LCPICMQIIKDAFLT+CGHSFC
Sbjct: 8   PLVPAVVKPEPSKNFSTDTTAAGTFLLVPTMSDLDKDFLCPICMQIIKDAFLTACGHSFC 67

Query: 88  YMCIFTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTAARQIKNTTSPYGYLHQALQK 147
           YMCI THLRNKSDCPCC H+L ++++FPN LLDKLLKKT+ RQI  T SP  +  QA+QK
Sbjct: 68  YMCIITHLRNKSDCPCCGHYLTNSNLFPNFLLDKLLKKTSDRQISKTASPVEHFRQAVQK 127

Query: 148 GCDMSIKDVDELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLNYI 207
           GC++++K++D LL LL EKKRKMEQEEAE NMQILL FL+CLRKQK++EL E+Q DL +I
Sbjct: 128 GCEVTMKELDTLLLLLTEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEVQTDLQFI 187

Query: 208 KEDISSVEKQRLELYRSKERYSGKMKMLVDDSVSTKSRSSLIDKHVNGINCGTQRLQGWM 267
           KEDI +VEK R++LYR+++RYS K++ML DDS   KSR S +D + +G+      L+G +
Sbjct: 188 KEDIGAVEKHRMDLYRARDRYSVKLRML-DDSGGRKSRHSSMDLNSSGLASSPLNLRGGL 247

Query: 268 NSGNSPNDRVDAKIQIGSQGS--LRKDAHCSSDLHSVAQFGSAIANKRRVHTQFNELQDY 327
           +SG S   + D K QI S G    R+D    SD   + Q G A+  K+RVHTQFN+LQ+ 
Sbjct: 248 SSG-SHTKKNDGKSQISSHGHGIQRRDPITGSDSQYINQSGLALVRKKRVHTQFNDLQEC 307

Query: 328 YLQKRRNWRKQMLKQEDGDIKFSRGESYSPALEDFQSVLTSFMRYSRLRVIAELRHGDLF 387
           YLQKRR    +   Q++ D  F   E YS  L+DFQSVLT+F RYSRLRVIAE+RHGD+F
Sbjct: 308 YLQKRRQAADKPHGQQERDTNFISREGYSCGLDDFQSVLTTFTRYSRLRVIAEIRHGDIF 367

Query: 388 HSANIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSW 447
           HSANIVSSIEFDRDD+ FATAGVSR IKVF+FS+VVNEP D H PVVEM+TRSKLSCLSW
Sbjct: 368 HSANIVSSIEFDRDDDLFATAGVSRRIKVFDFSAVVNEPTDAHCPVVEMTTRSKLSCLSW 427

Query: 448 NKYTKNHIASSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKV 507
           NKY KN IASSDYEGIVTVW + TR+S+MEYEEHEKRAWSVDFSR++PSMLVSGSDDCKV
Sbjct: 428 NKYAKNQIASSDYEGIVTVWTMTTRKSLMEYEEHEKRAWSVDFSRTDPSMLVSGSDDCKV 487

Query: 508 KIWCTRQEASVFNIDMKANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGH 567
           K+WCT QEASV NIDMKAN+C VKYNPGS  Y+AVGSADH+IHYYDLRNIS+P+HVF GH
Sbjct: 488 KVWCTNQEASVLNIDMKANICCVKYNPGSGNYIAVGSADHHIHYYDLRNISRPVHVFTGH 547

Query: 568 KKAVSYVKFLSNNELASASTDSTLRLWDVKENLPLCAYRGHTNEKNFVGLTVNCEYIACG 627
           KKAVSYVKFLSN+ELASASTDSTLRLWDVK+NLP+  +RGH NEKNFVGLTV  EYIACG
Sbjct: 548 KKAVSYVKFLSNDELASASTDSTLRLWDVKQNLPVRTFRGHANEKNFVGLTVRSEYIACG 607

Query: 628 SETNEVYIYHKAISKPMAWNRFSS-DSEDNDEDAGSYFISAVCWKSDSPTILTANSQGTI 687
           SETNEV++YHK ISKP+ W+RF + D ED +++AGSYFISAVCWKSD PTILTANSQGTI
Sbjct: 608 SETNEVFVYHKEISKPLTWHRFGTLDMEDAEDEAGSYFISAVCWKSDRPTILTANSQGTI 667

Query: 688 KVLVLA 691
           KVLVLA
Sbjct: 668 KVLVLA 671

[Close]
BLAST of Sed0017890 vs. ExPASy Swiss-Prot
Match: Q8NHY2 (E3 ubiquitin-protein ligase COP1 OS=Homo sapiens OX=9606 GN=COP1 PE=1 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 6.8e-125
Identity = 264/661 (39.94%), Postives = 387/661 (58.55%), Query Frame = 0 

Query: 57  SSEDLDKDMLCPICMQIIKDAFLTSCGHSFCYMCIFTHLRNKSDCPCCAHFLRS-NSIFP 116
           S ED   D +CPIC  +I++A++T CGHSFCY CI   L + + CP C + + + + ++P
Sbjct: 126 SYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYP 185

Query: 117 NILLDKLLKKTAAR----QIK---NTTSPYGYLHQALQK--GCD---MSIKDVDELLTLL 176
           N L+++L+ K   R    + K   + +S  G+  Q  Q   G D   + + +V+ +L LL
Sbjct: 186 NFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNLMLELL 245

Query: 177 AEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLNYIKEDISSVEKQRLELYR 236
            +KK+++E E     +QIL+ FL   R+ K E+L +IQ +L+ ++EDI  VE+       
Sbjct: 246 VQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEM------ 305

Query: 237 SKERYSGKMKMLVDDS------VSTKSRSSLIDKHVNGINCGTQRLQGWMNSGNSPNDRV 296
                SG    + +DS        + S SS+ID         T+  Q    SG+S     
Sbjct: 306 -----SGLYSPVSEDSTVPQFEAPSPSHSSIID--------STEYSQPPGFSGSS----- 365

Query: 297 DAKIQIGSQGSLRKDAHCSSDLHSVAQFGSAIANKRRVHTQFNELQDYYLQKRRNWRKQM 356
                       +K    +S L S          ++R+   F +L+  Y   R +     
Sbjct: 366 ----------QTKKQPWYNSTLAS---------RRKRLTAHFEDLEQCYFSTRMS----- 425

Query: 357 LKQEDGDIKFSRGESYSPALEDFQSVLTSFMRYSRLRVIAELRH-GDLFHSANIVSSIEF 416
                   + S     +  L++FQ  L+ F RY+ +R +A L +  DL++ ++IVSSIEF
Sbjct: 426 --------RISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEF 485

Query: 417 DRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKNHIASS 476
           DRD ++FA AGV++ IKV+E+ +V+ +  D+H+P  EM+  SK+SC+SW+ Y KN +ASS
Sbjct: 486 DRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASS 545

Query: 477 DYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASV 536
           DYEG V +WD  T Q    Y+EHEKR WSVDF+  +P +L SGSDD KVK+W T  + SV
Sbjct: 546 DYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSV 605

Query: 537 FNIDMKANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLS 596
            +I+ KANVC VK++P S  ++A G ADH +HYYDLRN  QP+ VF GH+KAVSY KF+S
Sbjct: 606 ASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVS 665

Query: 597 NNELASASTDSTLRLWDVKENLPLCAYRGHTNEKNFVGLTVNCEYIACGSETNEVYIYHK 656
             E+ SASTDS L+LW+V +   L +++GH NEKNFVGL  N +YIACGSE N +Y+Y+K
Sbjct: 666 GEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYK 725

Query: 657 AISKPMAWNRF----SSDSEDNDEDAGSYFISAVCWKS----DSPTILTANSQGTIKVLV 690
            +SK +   +F    S   +D  ED  + F+SAVCW++    +S  ++ ANSQGTIKVL 
Sbjct: 726 GLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLE 730

[Close]
BLAST of Sed0017890 vs. ExPASy Swiss-Prot
Match: Q9R1A8 (E3 ubiquitin-protein ligase COP1 OS=Mus musculus OX=10090 GN=Cop1 PE=1 SV=2)

HSP 1 Score: 449.1 bits (1154), Expect = 8.9e-125
Identity = 264/661 (39.94%), Postives = 386/661 (58.40%), Query Frame = 0 

Query: 57  SSEDLDKDMLCPICMQIIKDAFLTSCGHSFCYMCIFTHLRNKSDCPCCAHFLRS-NSIFP 116
           S ED   D +CPIC  +I++A++T CGHSFCY CI   L + + CP C + + + + ++P
Sbjct: 128 SYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYP 187

Query: 117 NILLDKLLKKTAAR----QIK---NTTSPYGYLHQALQK--GCD---MSIKDVDELLTLL 176
           N L+++L+ K   R    + K   + +S  G+  Q  Q   G D   + + +V+ +L LL
Sbjct: 188 NFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELL 247

Query: 177 AEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLNYIKEDISSVEKQRLELYR 236
            +KK+++E E     +QIL+ FL   R+ K E+L +IQ +L+ ++EDI  VE+       
Sbjct: 248 VQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEM------ 307

Query: 237 SKERYSGKMKMLVDDS------VSTKSRSSLIDKHVNGINCGTQRLQGWMNSGNSPNDRV 296
                SG    + +DS        + S SS+ID         T+  Q    SG S     
Sbjct: 308 -----SGLYSPVSEDSTVPQFEAPSPSHSSIID--------STEYSQPPGFSGTS----- 367

Query: 297 DAKIQIGSQGSLRKDAHCSSDLHSVAQFGSAIANKRRVHTQFNELQDYYLQKRRNWRKQM 356
                       +K    +S L S          ++R+   F +L+  Y   R +     
Sbjct: 368 ----------QTKKQPWYNSTLAS---------RRKRLTAHFEDLEQCYFSTRMS----- 427

Query: 357 LKQEDGDIKFSRGESYSPALEDFQSVLTSFMRYSRLRVIAELRH-GDLFHSANIVSSIEF 416
                   + S     +  L++FQ  L+ F RY+ +R +A L +  DL++ ++IVSSIEF
Sbjct: 428 --------RISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEF 487

Query: 417 DRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKNHIASS 476
           DRD ++FA AGV++ IKV+E+ +V+ +  D+H+P  EM+  SK+SC+SW+ Y KN +ASS
Sbjct: 488 DRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASS 547

Query: 477 DYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASV 536
           DYEG V +WD  T Q    Y+EHEKR WSVDF+  +P +L SGSDD KVK+W T  + SV
Sbjct: 548 DYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSV 607

Query: 537 FNIDMKANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLS 596
            +I+ KANVC VK++P S  ++A G ADH +HYYDLRN  QP+ VF GH+KAVSY KF+S
Sbjct: 608 ASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVS 667

Query: 597 NNELASASTDSTLRLWDVKENLPLCAYRGHTNEKNFVGLTVNCEYIACGSETNEVYIYHK 656
             E+ SASTDS L+LW+V +   L +++GH NEKNFVGL  N +YIACGSE N +Y+Y+K
Sbjct: 668 GEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYK 727

Query: 657 AISKPMAWNRF----SSDSEDNDEDAGSYFISAVCWKS----DSPTILTANSQGTIKVLV 690
            +SK +   +F    S   +D  ED  + F+SAVCW++    +S  ++ ANSQGTIKVL 
Sbjct: 728 GLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALSDGESNVLIAANSQGTIKVLE 732

[Close]
BLAST of Sed0017890 vs. ExPASy Swiss-Prot
Match: Q94BM7 (Protein SPA1-RELATED 4 OS=Arabidopsis thaliana OX=3702 GN=SPA4 PE=1 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 4.7e-94
Identity = 203/542 (37.45%), Postives = 312/542 (57.56%), Query Frame = 0 

Query: 163 LAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLNYIKEDISSVEKQRLELY 222
           L E++  ME  +     ++LL FL+ ++++K E  +++Q  ++ +  DI  V K++L L 
Sbjct: 275 LEEREAAMELRDRIEEQELLLEFLFLIQQRKQEAADKLQDTISLLSSDIDQVVKRQLVLQ 334

Query: 223 ---RSKERYSGKMKMLVDDSVSTKSRSSLIDKHVNGINCGTQRLQGWMNSGNSPNDRVDA 282
              R    +    K +   + +T +                       N  NS ++  ++
Sbjct: 335 QKGRDVRSFLASRKRIRQGAETTAAEEE--------------------NDDNSIDE--ES 394

Query: 283 KIQIGSQGSLRKDAHCSSDLHSV--AQFGSAIANKRRVHTQFNELQDYYLQKRRNWR--- 342
           K+    + +L + +    +L  +    F +     +        L  YY     N R   
Sbjct: 395 KLDDTLESTLLESSRLMRNLKKLESVYFATRYRQIKAATAAEKPLARYYSALSCNGRSSE 454

Query: 343 KQMLKQEDGD-IKFSRGESYSPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSS 402
           K  + Q   D I  SR   +   ++ F   L  ++ +S+LRV A+L+ GDL +S+N+V +
Sbjct: 455 KSSMSQPSKDPINDSRQGGW---IDPFLEGLCKYLSFSKLRVKADLKQGDLLNSSNLVCA 514

Query: 403 IEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKNHI 462
           I FDRD EFFATAGV++ IK+FE  S++ +  D+H+PVVE+++RSKLS + WN Y K+ +
Sbjct: 515 IGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQV 574

Query: 463 ASSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQE 522
           ASS++EG+V VWDV   Q V E +EHEKR WS+D+S ++P++L SGSDD  VK+W   Q 
Sbjct: 575 ASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG 634

Query: 523 ASVFNIDMKANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVK 582
            S+  I  KAN+C V++   +   +A GSADH ++YYDLRN   PL    GH K VSYV+
Sbjct: 635 VSIGTIKTKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVR 694

Query: 583 FLSNNELASASTDSTLRLWDVKENL------PLCAYRGHTNEKNFVGLTVNCEYIACGSE 642
           F+ ++ L S+STD+TL+LWD+  ++      PL ++ GHTN KNFVGL+V+  YIA GSE
Sbjct: 695 FVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSE 754

Query: 643 TNEVYIYHKAISKPMAWNRFSS--DSEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIK 688
           TNEV++YHKA   P+   +F +     + + D  S FIS+VCW+  S T++ ANS G IK
Sbjct: 755 TNEVFVYHKAFPMPVLSYKFKTIDPVSELEVDDASQFISSVCWRGQSSTLVAANSTGNIK 791

[Close]
BLAST of Sed0017890 vs. ExPASy TrEMBL
Match: A0A6J1CL47 (E3 ubiquitin-protein ligase COP1-like OS=Momordica charantia OX=3673 GN=LOC111012608 PE=4 SV=1)

HSP 1 Score: 1249.6 bits (3232), Expect = 0.0e+00
Identity = 629/696 (90.37%), Postives = 656/696 (94.25%), Query Frame = 0 

Query: 1   MGGGSIGGALVPTVKTDPSAADSTPSAPPPPSLPPPPPPMPEATA----AGEANATAADL 60
           MGGGS+   LVPTVKT+PSAADST   PPPP LPPPPPP PEA A    AGE NATA++ 
Sbjct: 1   MGGGSM-APLVPTVKTEPSAADSTAPPPPPPPLPPPPPPPPEAMAAELEAGELNATASEA 60

Query: 61  SSEDLDKDMLCPICMQIIKDAFLTSCGHSFCYMCIFTHLRNKSDCPCCAHFLRSNSIFPN 120
           +SEDLDKDMLCPICMQIIKDAFLT+CGHSFCYMCI THLRNKSDCPCC HFLRSNSIFPN
Sbjct: 61  NSEDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCGHFLRSNSIFPN 120

Query: 121 ILLDKLLKKTAARQIKNTTSPYGYLHQALQKGCDMSIKDVDELLTLLAEKKRKMEQEEAE 180
           ILLDKLLKKT+ARQIK TTSP+GYLHQALQKGCDMSIK+++EL+TLLAEKKRKMEQEEAE
Sbjct: 121 ILLDKLLKKTSARQIKKTTSPFGYLHQALQKGCDMSIKELEELVTLLAEKKRKMEQEEAE 180

Query: 181 TNMQILLGFLYCLRKQKLEELNEIQADLNYIKEDISSVEKQRLELYRSKERYSGKMKMLV 240
           TNMQILLGFLYCLRKQKLEELNEIQADL+YIKEDISSVEKQRLELYRSKERYSGKMKMLV
Sbjct: 181 TNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLV 240

Query: 241 DDSVSTKSRSSLIDKHVNGINCGTQRLQGWMNSGNSPNDRVDAKIQIGSQGSLRKDAHCS 300
           DD+VSTKSRSSLIDKH NGINCGTQR QGWM+SGNS N R D KIQ+GSQG LRKDA+C 
Sbjct: 241 DDTVSTKSRSSLIDKHGNGINCGTQRSQGWMSSGNSANPRADVKIQLGSQGPLRKDAYCG 300

Query: 301 SDLHSVAQFGSAIANKRRVHTQFNELQDYYLQKRRNWRKQMLKQEDGDIKFSRGESYSPA 360
           SDLHSVAQ G A+ANKRRVHTQFNELQD YLQKRRNWRKQ+ KQED D KF+ GESY+PA
Sbjct: 301 SDLHSVAQSGLAVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDTKFNSGESYNPA 360

Query: 361 LEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSRCIKVFE 420
           L+DFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSRCIKVFE
Sbjct: 361 LDDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSRCIKVFE 420

Query: 421 FSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKNHIASSDYEGIVTVWDVNTRQSVMEY 480
           FSSVVNEP DVHFP VEMSTRSKLSCLSWNKYTK+HIASSDYEGIVTVWDVNTRQSVMEY
Sbjct: 421 FSSVVNEPTDVHFPAVEMSTRSKLSCLSWNKYTKSHIASSDYEGIVTVWDVNTRQSVMEY 480

Query: 481 EEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMKANVCSVKYNPGSSL 540
           EEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQE S+FNIDMKANVCSVKYNPGSSL
Sbjct: 481 EEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQENSLFNIDMKANVCSVKYNPGSSL 540

Query: 541 YVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTLRLWDVKE 600
           YVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTLRLWDVKE
Sbjct: 541 YVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTLRLWDVKE 600

Query: 601 NLPLCAYRGHTNEKNFVGLTVNCEYIACGSETNEVYIYHKAISKPMAWNRF-SSDSEDND 660
           N+PLC YRGHTNEKNFVGLTVN EYIACGSETNEV+IYHKAISKPMAW+RF SSD EDND
Sbjct: 601 NMPLCVYRGHTNEKNFVGLTVNSEYIACGSETNEVFIYHKAISKPMAWHRFSSSDLEDND 660

Query: 661 EDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 692
           EDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP
Sbjct: 661 EDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 695

[Close]
BLAST of Sed0017890 vs. ExPASy TrEMBL
Match: A0A6J1GSN7 (E3 ubiquitin-protein ligase COP1-like OS=Cucurbita moschata OX=3662 GN=LOC111457170 PE=4 SV=1)

HSP 1 Score: 1234.9 bits (3194), Expect = 0.0e+00
Identity = 627/707 (88.68%), Postives = 653/707 (92.36%), Query Frame = 0 

Query: 1   MGGGSIGGALVPTVKTDPSAADST------------PSAPPPPSLPPPPPPMPEATA--- 60
           MGGGSI GALVPTVK DPSA DST            P  PPP S PPPPPP P   A   
Sbjct: 1   MGGGSI-GALVPTVKPDPSALDSTASPAPQPLPPPPPPPPPPSSSPPPPPPPPLVMAAQL 60

Query: 61  -AGEANATAADLSSEDLDKDMLCPICMQIIKDAFLTSCGHSFCYMCIFTHLRNKSDCPCC 120
            AGEA A+A+D+++EDLDKDMLCPICMQIIKDAFLT+CGHSFCYMCI THLRNKSDCPCC
Sbjct: 61  DAGEAKASASDVNAEDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCC 120

Query: 121 AHFLRSNSIFPNILLDKLLKKTAARQIKNTTSPYGYLHQALQKGCDMSIKDVDELLTLLA 180
           ++F+RSNSIFPNILLDK LKKTAARQIK TTSP+ YLH ALQKGCDMSIKD+DELLTLLA
Sbjct: 121 SNFIRSNSIFPNILLDKFLKKTAARQIKKTTSPFEYLHHALQKGCDMSIKDLDELLTLLA 180

Query: 181 EKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLNYIKEDISSVEKQRLELYRS 240
           EKKRKMEQEEAETNMQILLGFLY LRKQKLEELNEIQADL+YIKEDISSVEKQRLELYRS
Sbjct: 181 EKKRKMEQEEAETNMQILLGFLYYLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRS 240

Query: 241 KERYSGKMKMLVDDSVSTKSRSSLIDKHVNGINCGTQRLQGWMNSGNSPNDRVDAKIQIG 300
           KERYSGKMKMLVDD+VSTKSRSSLIDK+ NG NCG QR QGWM+SGNSPN R DAK  +G
Sbjct: 241 KERYSGKMKMLVDDTVSTKSRSSLIDKNGNGANCGPQRSQGWMSSGNSPNARADAKTHVG 300

Query: 301 SQGSLRKDAHCSSDLHSVAQFGSAIANKRRVHTQFNELQDYYLQKRRNWRKQMLKQEDGD 360
           SQG LRKDAHCSSDLHSVAQ G  IANKRRVHTQFNELQDYYLQKRRNWRKQ++KQED D
Sbjct: 301 SQGPLRKDAHCSSDLHSVAQSGLGIANKRRVHTQFNELQDYYLQKRRNWRKQLVKQEDKD 360

Query: 361 IKFSRGESYSPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFA 420
           +K S GESY+PALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFA
Sbjct: 361 VKLSSGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFA 420

Query: 421 TAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKNHIASSDYEGIVTV 480
           TAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTK+HIASSDYEGIVTV
Sbjct: 421 TAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIVTV 480

Query: 481 WDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMKAN 540
           WDVNTRQSVMEYEEHEKRAWSVDFSRSEP+MLVSGSDDCKVKIWCTRQEASVFNID+KAN
Sbjct: 481 WDVNTRQSVMEYEEHEKRAWSVDFSRSEPTMLVSGSDDCKVKIWCTRQEASVFNIDLKAN 540

Query: 541 VCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASAS 600
           VCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASAS
Sbjct: 541 VCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASAS 600

Query: 601 TDSTLRLWDVKENLPLCAYRGHTNEKNFVGLTVNCEYIACGSETNEVYIYHKAISKPMAW 660
           TDSTLRLWDVKE +PLC YRGHTNEKNFVGLTVN EYIACGSETNEV+IYHKAISKPMAW
Sbjct: 601 TDSTLRLWDVKEYMPLCVYRGHTNEKNFVGLTVNSEYIACGSETNEVFIYHKAISKPMAW 660

Query: 661 NRFSSDSEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 692
           +RFSSD EDNDEDA SYFISAVCWKSDSPTILTANSQGTIKVLVLAP
Sbjct: 661 HRFSSDLEDNDEDASSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 706

[Close]
BLAST of Sed0017890 vs. ExPASy TrEMBL
Match: A0A6J1K4K9 (E3 ubiquitin-protein ligase COP1-like OS=Cucurbita maxima OX=3661 GN=LOC111490025 PE=4 SV=1)

HSP 1 Score: 1234.6 bits (3193), Expect = 0.0e+00
Identity = 626/703 (89.05%), Postives = 653/703 (92.89%), Query Frame = 0 

Query: 1   MGGGSIGGALVPTVKTDPSAADST--------PSAPPPPSLPPPPPPMPEATA----AGE 60
           MGGGSI GALVPTVK DPSA DST        P  PPPPS  PPPPP+P   A    AGE
Sbjct: 1   MGGGSI-GALVPTVKPDPSALDSTASPAPQPLPLPPPPPSSSPPPPPLPVVMAAQFDAGE 60

Query: 61  ANATAADLSSEDLDKDMLCPICMQIIKDAFLTSCGHSFCYMCIFTHLRNKSDCPCCAHFL 120
           A A+A+D+++EDLDKDMLCPICMQIIKDAFLT+CGHSFCYMCI THLRNKSDCPCC++F+
Sbjct: 61  AKASASDVNAEDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCSNFI 120

Query: 121 RSNSIFPNILLDKLLKKTAARQIKNTTSPYGYLHQALQKGCDMSIKDVDELLTLLAEKKR 180
           RSNSIFPNILLDK LKKTAARQIK TTSP+ YLH ALQKGCDMSIKD+DELLTLLAEKKR
Sbjct: 121 RSNSIFPNILLDKFLKKTAARQIKKTTSPFEYLHHALQKGCDMSIKDLDELLTLLAEKKR 180

Query: 181 KMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLNYIKEDISSVEKQRLELYRSKERY 240
           KMEQEEAETNMQILLGFLY LRKQKLEELNEIQADL+YIKEDISSVEKQRLELYRSKERY
Sbjct: 181 KMEQEEAETNMQILLGFLYYLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERY 240

Query: 241 SGKMKMLVDDSVSTKSRSSLIDKHVNGINCGTQRLQGWMNSGNSPNDRVDAKIQIGSQGS 300
           SGKMKMLVDD+VSTKSRSSLIDK+ NG NC  QR QGWM+SGNSPN R DAK  +GSQG 
Sbjct: 241 SGKMKMLVDDTVSTKSRSSLIDKNGNGANCCPQRSQGWMSSGNSPNARADAKTHVGSQGL 300

Query: 301 LRKDAHCSSDLHSVAQFGSAIANKRRVHTQFNELQDYYLQKRRNWRKQMLKQEDGDIKFS 360
           LRKDAHCSSDLHSVAQ G  +ANKRRVHTQFNELQDYYLQKRRNWRK ++KQED DIK S
Sbjct: 301 LRKDAHCSSDLHSVAQSGLGVANKRRVHTQFNELQDYYLQKRRNWRKHLVKQEDKDIKLS 360

Query: 361 RGESYSPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGV 420
            GESY+PALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGV
Sbjct: 361 SGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGV 420

Query: 421 SRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKNHIASSDYEGIVTVWDVN 480
           SRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTK+HIASSDYEGIVTVWDVN
Sbjct: 421 SRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIVTVWDVN 480

Query: 481 TRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMKANVCSV 540
           TRQSVMEYEEHEKRAWSVDFSRSEP+MLVSGSDDCKVKIWCTRQEASVFNID+KANVCSV
Sbjct: 481 TRQSVMEYEEHEKRAWSVDFSRSEPTMLVSGSDDCKVKIWCTRQEASVFNIDLKANVCSV 540

Query: 541 KYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDST 600
           KYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDST
Sbjct: 541 KYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDST 600

Query: 601 LRLWDVKENLPLCAYRGHTNEKNFVGLTVNCEYIACGSETNEVYIYHKAISKPMAWNRFS 660
           LRLWDVKE +PLC YRGHTNEKNFVGLTVN EYIACGSETNEV+IYHKAISKPMAW+RFS
Sbjct: 601 LRLWDVKEYMPLCVYRGHTNEKNFVGLTVNSEYIACGSETNEVFIYHKAISKPMAWHRFS 660

Query: 661 SDSEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 692
           SD EDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP
Sbjct: 661 SDLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 702

[Close]
BLAST of Sed0017890 vs. ExPASy TrEMBL
Match: A0A5A7TIH5 (E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G00010 PE=4 SV=1)

HSP 1 Score: 1233.8 bits (3191), Expect = 0.0e+00
Identity = 626/707 (88.54%), Postives = 651/707 (92.08%), Query Frame = 0 

Query: 1   MGGGSIGGALVPTVKTDPSAADSTPSA--PPPPSLPPPPPPMP--------------EAT 60
           MGGGS+ GALVPTVKT+PS  DSTPS+  PPPP LPP PPP P               A 
Sbjct: 1   MGGGSV-GALVPTVKTEPSTLDSTPSSSPPPPPPLPPSPPPPPPSDLMPQFLPEDANAAA 60

Query: 61  AAGEANATAADLSSEDLDKDMLCPICMQIIKDAFLTSCGHSFCYMCIFTHLRNKSDCPCC 120
           A     A A+   ++DLDKDMLCPICMQIIKDAFLT+CGHSFCYMCI THLRNKSDCPCC
Sbjct: 61  ATPTPTAAASHSDTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCC 120

Query: 121 AHFLRSNSIFPNILLDKLLKKTAARQIKNTTSPYGYLHQALQKGCDMSIKDVDELLTLLA 180
           AHFLRS SIFPNILLDKLLKKT+ARQIK TTSP+GYL QALQKGCDM+IKD++ELLTLLA
Sbjct: 121 AHFLRSTSIFPNILLDKLLKKTSARQIKKTTSPFGYLQQALQKGCDMTIKDLEELLTLLA 180

Query: 181 EKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLNYIKEDISSVEKQRLELYRS 240
           EKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADL+YIKEDISSVEKQRLEL+RS
Sbjct: 181 EKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRS 240

Query: 241 KERYSGKMKMLVDDSVSTKSRSSLIDKHVNGINCGTQRLQGWMNSGNSPNDRVDAKIQIG 300
           KERYSGKMKML DD+VSTKSRSSLIDKH NGIN G QR QGWM+SGNSPN R DAKIQ+ 
Sbjct: 241 KERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLS 300

Query: 301 SQGSLRKDAHCSSDLHSVAQFGSAIANKRRVHTQFNELQDYYLQKRRNWRKQMLKQEDGD 360
           SQG LRKDA+CSSDLHS+AQ G  +ANKRRVHTQFNELQD YLQKRRNWRKQ+ KQED D
Sbjct: 301 SQGPLRKDAYCSSDLHSIAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRD 360

Query: 361 IKFSRGESYSPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFA 420
           IKFS GESY+PALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFA
Sbjct: 361 IKFSGGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFA 420

Query: 421 TAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKNHIASSDYEGIVTV 480
           TAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTK+HIASSDYEGIVTV
Sbjct: 421 TAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIVTV 480

Query: 481 WDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMKAN 540
           WDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMKAN
Sbjct: 481 WDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMKAN 540

Query: 541 VCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASAS 600
           VCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASAS
Sbjct: 541 VCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASAS 600

Query: 601 TDSTLRLWDVKENLPLCAYRGHTNEKNFVGLTVNCEYIACGSETNEVYIYHKAISKPMAW 660
           TDSTLRLWDVKENLPLC YRGHTNEKNFVGLTVN EYIACGSETNEV+IYHKAISKPMAW
Sbjct: 601 TDSTLRLWDVKENLPLCVYRGHTNEKNFVGLTVNSEYIACGSETNEVFIYHKAISKPMAW 660

Query: 661 NRFSSDSEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 692
           +RFSSD EDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP
Sbjct: 661 HRFSSDLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 706

[Close]
BLAST of Sed0017890 vs. ExPASy TrEMBL
Match: A0A1S3C954 (E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo OX=3656 GN=LOC103498239 PE=4 SV=1)

HSP 1 Score: 1233.8 bits (3191), Expect = 0.0e+00
Identity = 626/707 (88.54%), Postives = 651/707 (92.08%), Query Frame = 0 

Query: 1   MGGGSIGGALVPTVKTDPSAADSTPSA--PPPPSLPPPPPPMP--------------EAT 60
           MGGGS+ GALVPTVKT+PS  DSTPS+  PPPP LPP PPP P               A 
Sbjct: 1   MGGGSV-GALVPTVKTEPSTLDSTPSSSPPPPPPLPPSPPPPPPSDLMPQFLPEDANAAA 60

Query: 61  AAGEANATAADLSSEDLDKDMLCPICMQIIKDAFLTSCGHSFCYMCIFTHLRNKSDCPCC 120
           A     A A+   ++DLDKDMLCPICMQIIKDAFLT+CGHSFCYMCI THLRNKSDCPCC
Sbjct: 61  ATPTPTAAASHSDTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCC 120

Query: 121 AHFLRSNSIFPNILLDKLLKKTAARQIKNTTSPYGYLHQALQKGCDMSIKDVDELLTLLA 180
           AHFLRS SIFPNILLDKLLKKT+ARQIK TTSP+GYL QALQKGCDM+IKD++ELLTLLA
Sbjct: 121 AHFLRSTSIFPNILLDKLLKKTSARQIKKTTSPFGYLQQALQKGCDMTIKDLEELLTLLA 180

Query: 181 EKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLNYIKEDISSVEKQRLELYRS 240
           EKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADL+YIKEDISSVEKQRLEL+RS
Sbjct: 181 EKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRS 240

Query: 241 KERYSGKMKMLVDDSVSTKSRSSLIDKHVNGINCGTQRLQGWMNSGNSPNDRVDAKIQIG 300
           KERYSGKMKML DD+VSTKSRSSLIDKH NGIN G QR QGWM+SGNSPN R DAKIQ+ 
Sbjct: 241 KERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLS 300

Query: 301 SQGSLRKDAHCSSDLHSVAQFGSAIANKRRVHTQFNELQDYYLQKRRNWRKQMLKQEDGD 360
           SQG LRKDA+CSSDLHS+AQ G  +ANKRRVHTQFNELQD YLQKRRNWRKQ+ KQED D
Sbjct: 301 SQGPLRKDAYCSSDLHSIAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRD 360

Query: 361 IKFSRGESYSPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFA 420
           IKFS GESY+PALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFA
Sbjct: 361 IKFSGGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFA 420

Query: 421 TAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKNHIASSDYEGIVTV 480
           TAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTK+HIASSDYEGIVTV
Sbjct: 421 TAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIVTV 480

Query: 481 WDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMKAN 540
           WDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMKAN
Sbjct: 481 WDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMKAN 540

Query: 541 VCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASAS 600
           VCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASAS
Sbjct: 541 VCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASAS 600

Query: 601 TDSTLRLWDVKENLPLCAYRGHTNEKNFVGLTVNCEYIACGSETNEVYIYHKAISKPMAW 660
           TDSTLRLWDVKENLPLC YRGHTNEKNFVGLTVN EYIACGSETNEV+IYHKAISKPMAW
Sbjct: 601 TDSTLRLWDVKENLPLCVYRGHTNEKNFVGLTVNSEYIACGSETNEVFIYHKAISKPMAW 660

Query: 661 NRFSSDSEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 692
           +RFSSD EDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP
Sbjct: 661 HRFSSDLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 706

[Close]
BLAST of Sed0017890 vs. TAIR 10
Match: AT2G32950.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 922.5 bits (2383), Expect = 1.9e-268
Identity = 462/666 (69.37%), Postives = 543/666 (81.53%), Query Frame = 0 

Query: 35  PPPPPMPEATAAGE---------ANATAADLSSEDLDKDMLCPICMQIIKDAFLTSCGHS 94
           P   P P  ++ GE           +  +++ + DLDKD+LCPICMQIIKDAFLT+CGHS
Sbjct: 11  PAVKPDPRTSSVGEGANRHENDDGGSGGSEIGAPDLDKDLLCPICMQIIKDAFLTACGHS 70

Query: 95  FCYMCIFTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTAARQIKNTTSPYGYLHQAL 154
           FCYMCI THLRNKSDCPCC+  L +N ++PN LLDKLLKKT+AR +  T SP     +AL
Sbjct: 71  FCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLDKLLKKTSARHVSKTASPLDQFREAL 130

Query: 155 QKGCDMSIKDVDELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLN 214
           Q+GCD+SIK+VD LLTLLAE+KRKMEQEEAE NMQILL FL+CLRKQK++ELNE+Q DL 
Sbjct: 131 QRGCDVSIKEVDNLLTLLAERKRKMEQEEAERNMQILLDFLHCLRKQKVDELNEVQTDLQ 190

Query: 215 YIKEDISSVEKQRLELYRSKERYSGKMKMLVDDSVSTKSRSSLIDKHVNGINCGTQRLQG 274
           YIKEDI++VE+ R++LYR+++RYS K++ML DD  +  +     +K+  G N  +  ++G
Sbjct: 191 YIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPSTRNAWPH--EKNQIGFNSNSLSIRG 250

Query: 275 WMNSGNSPNDRVDAKIQIGSQGSLRKDAHCSSDLHSVAQFGSAIANKRRVHTQFNELQDY 334
               GN  N +V+ K Q  S G  +KDA   SD  S+ Q   ++A K+R+H QFN+LQ+ 
Sbjct: 251 GNFVGNYQNKKVEGKAQGSSHGLPKKDALSGSDSQSLNQSTVSMARKKRIHAQFNDLQEC 310

Query: 335 YLQKRRNWRKQMLKQEDGDIKFSRGESYSPALEDFQSVLTSFMRYSRLRVIAELRHGDLF 394
           YLQKRR    Q   +++ D    R E YS  L DFQSVLT+F RYSRLRVIAE+RHGD+F
Sbjct: 311 YLQKRRQLADQPNSKQENDKSVVRREGYSNGLADFQSVLTTFTRYSRLRVIAEIRHGDIF 370

Query: 395 HSANIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSW 454
           HSANIVSSIEFDRDDE FATAGVSRCIKVF+FSSVVNEPAD+  P+VEMSTRSKLSCLSW
Sbjct: 371 HSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMSTRSKLSCLSW 430

Query: 455 NKYTKNHIASSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKV 514
           NK+ KNHIASSDYEGIVTVWDV TRQS+MEYEEHEKRAWSVDFSR+EPSMLVSGSDDCKV
Sbjct: 431 NKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 490

Query: 515 KIWCTRQEASVFNIDMKANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGH 574
           K+WCTRQEASV NIDMKAN+C VKYNPGSS Y+AVGSADH+IHYYDLRNISQPLHVF+GH
Sbjct: 491 KVWCTRQEASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGH 550

Query: 575 KKAVSYVKFLSNNELASASTDSTLRLWDVKENLPLCAYRGHTNEKNFVGLTVNCEYIACG 634
           KKAVSYVKFLSNNELASASTDSTLRLWDVK+NLP+  +RGHTNEKNFVGLTVN EY+ACG
Sbjct: 551 KKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLACG 610

Query: 635 SETNEVYIYHKAISKPMAWNRFSS-DSEDNDEDAGSYFISAVCWKSDSPTILTANSQGTI 691
           SETNEVY+YHK I++P+  +RF S D +D +E+AGSYFISAVCWKSDSPT+LTANSQGTI
Sbjct: 611 SETNEVYVYHKEITRPVTSHRFGSPDMDDAEEEAGSYFISAVCWKSDSPTMLTANSQGTI 670

[Close]
BLAST of Sed0017890 vs. TAIR 10
Match: AT1G53090.1 (SPA1-related 4 )

HSP 1 Score: 347.1 bits (889), Expect = 3.4e-95
Identity = 203/542 (37.45%), Postives = 312/542 (57.56%), Query Frame = 0 

Query: 163 LAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLNYIKEDISSVEKQRLELY 222
           L E++  ME  +     ++LL FL+ ++++K E  +++Q  ++ +  DI  V K++L L 
Sbjct: 275 LEEREAAMELRDRIEEQELLLEFLFLIQQRKQEAADKLQDTISLLSSDIDQVVKRQLVLQ 334

Query: 223 ---RSKERYSGKMKMLVDDSVSTKSRSSLIDKHVNGINCGTQRLQGWMNSGNSPNDRVDA 282
              R    +    K +   + +T +                       N  NS ++  ++
Sbjct: 335 QKGRDVRSFLASRKRIRQGAETTAAEEE--------------------NDDNSIDE--ES 394

Query: 283 KIQIGSQGSLRKDAHCSSDLHSV--AQFGSAIANKRRVHTQFNELQDYYLQKRRNWR--- 342
           K+    + +L + +    +L  +    F +     +        L  YY     N R   
Sbjct: 395 KLDDTLESTLLESSRLMRNLKKLESVYFATRYRQIKAATAAEKPLARYYSALSCNGRSSE 454

Query: 343 KQMLKQEDGD-IKFSRGESYSPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSS 402
           K  + Q   D I  SR   +   ++ F   L  ++ +S+LRV A+L+ GDL +S+N+V +
Sbjct: 455 KSSMSQPSKDPINDSRQGGW---IDPFLEGLCKYLSFSKLRVKADLKQGDLLNSSNLVCA 514

Query: 403 IEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKNHI 462
           I FDRD EFFATAGV++ IK+FE  S++ +  D+H+PVVE+++RSKLS + WN Y K+ +
Sbjct: 515 IGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQV 574

Query: 463 ASSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQE 522
           ASS++EG+V VWDV   Q V E +EHEKR WS+D+S ++P++L SGSDD  VK+W   Q 
Sbjct: 575 ASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG 634

Query: 523 ASVFNIDMKANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVK 582
            S+  I  KAN+C V++   +   +A GSADH ++YYDLRN   PL    GH K VSYV+
Sbjct: 635 VSIGTIKTKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVR 694

Query: 583 FLSNNELASASTDSTLRLWDVKENL------PLCAYRGHTNEKNFVGLTVNCEYIACGSE 642
           F+ ++ L S+STD+TL+LWD+  ++      PL ++ GHTN KNFVGL+V+  YIA GSE
Sbjct: 695 FVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSE 754

Query: 643 TNEVYIYHKAISKPMAWNRFSS--DSEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIK 688
           TNEV++YHKA   P+   +F +     + + D  S FIS+VCW+  S T++ ANS G IK
Sbjct: 755 TNEVFVYHKAFPMPVLSYKFKTIDPVSELEVDDASQFISSVCWRGQSSTLVAANSTGNIK 791

[Close]
BLAST of Sed0017890 vs. TAIR 10
Match: AT1G53090.2 (SPA1-related 4 )

HSP 1 Score: 347.1 bits (889), Expect = 3.4e-95
Identity = 203/542 (37.45%), Postives = 312/542 (57.56%), Query Frame = 0 

Query: 163 LAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLNYIKEDISSVEKQRLELY 222
           L E++  ME  +     ++LL FL+ ++++K E  +++Q  ++ +  DI  V K++L L 
Sbjct: 275 LEEREAAMELRDRIEEQELLLEFLFLIQQRKQEAADKLQDTISLLSSDIDQVVKRQLVLQ 334

Query: 223 ---RSKERYSGKMKMLVDDSVSTKSRSSLIDKHVNGINCGTQRLQGWMNSGNSPNDRVDA 282
              R    +    K +   + +T +                       N  NS ++  ++
Sbjct: 335 QKGRDVRSFLASRKRIRQGAETTAAEEE--------------------NDDNSIDE--ES 394

Query: 283 KIQIGSQGSLRKDAHCSSDLHSV--AQFGSAIANKRRVHTQFNELQDYYLQKRRNWR--- 342
           K+    + +L + +    +L  +    F +     +        L  YY     N R   
Sbjct: 395 KLDDTLESTLLESSRLMRNLKKLESVYFATRYRQIKAATAAEKPLARYYSALSCNGRSSE 454

Query: 343 KQMLKQEDGD-IKFSRGESYSPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSS 402
           K  + Q   D I  SR   +   ++ F   L  ++ +S+LRV A+L+ GDL +S+N+V +
Sbjct: 455 KSSMSQPSKDPINDSRQGGW---IDPFLEGLCKYLSFSKLRVKADLKQGDLLNSSNLVCA 514

Query: 403 IEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKNHI 462
           I FDRD EFFATAGV++ IK+FE  S++ +  D+H+PVVE+++RSKLS + WN Y K+ +
Sbjct: 515 IGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQV 574

Query: 463 ASSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQE 522
           ASS++EG+V VWDV   Q V E +EHEKR WS+D+S ++P++L SGSDD  VK+W   Q 
Sbjct: 575 ASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG 634

Query: 523 ASVFNIDMKANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVK 582
            S+  I  KAN+C V++   +   +A GSADH ++YYDLRN   PL    GH K VSYV+
Sbjct: 635 VSIGTIKTKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVR 694

Query: 583 FLSNNELASASTDSTLRLWDVKENL------PLCAYRGHTNEKNFVGLTVNCEYIACGSE 642
           F+ ++ L S+STD+TL+LWD+  ++      PL ++ GHTN KNFVGL+V+  YIA GSE
Sbjct: 695 FVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSE 754

Query: 643 TNEVYIYHKAISKPMAWNRFSS--DSEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIK 688
           TNEV++YHKA   P+   +F +     + + D  S FIS+VCW+  S T++ ANS G IK
Sbjct: 755 TNEVFVYHKAFPMPVLSYKFKTIDPVSELEVDDASQFISSVCWRGQSSTLVAANSTGNIK 791

[Close]
BLAST of Sed0017890 vs. TAIR 10
Match: AT2G46340.1 (SPA (suppressor of phyA-105) protein family )

HSP 1 Score: 338.2 bits (866), Expect = 1.6e-92
Identity = 203/546 (37.18%), Postives = 306/546 (56.04%), Query Frame = 0 

Query: 162  LLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLNYIKEDISSVEKQRLEL 221
            L+ E         AE   ++LL FL  L  QK ++ +++  D+  +++DI   E+     
Sbjct: 528  LICEDDSVKSTAAAEEISELLLHFLSSLEVQKKKKASKLLQDIQTLEDDIKEAER----- 587

Query: 222  YRSKERYSGKMKML-VDDSVSTKSRSSLIDKHVNGIN------CGTQRLQGWMNSGNSPN 281
                 RYS  + ++    ++  + +SS +D+H    +        T RL       ++  
Sbjct: 588  -----RYSSNVSLVRSHGAIEKRVQSSPLDEHCTTSSALFVPTANTDRLM------SNIR 647

Query: 282  DRVDAKIQIGSQGSLRKDAHCSSDLHSVAQFGSAIANKRRVHTQFNELQDYYLQKRRNWR 341
               DA   + SQ +L   A       + A+    + ++ R     NE QD          
Sbjct: 648  QLEDAYFFMRSQINLSSSA-------ATARSDKTLKDRDRCSENQNENQD---------- 707

Query: 342  KQMLKQEDGDIKFSRGESYSPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSI 401
                         ++G+S S  LE F   L  F RYS+      +R GDL +SA++V S+
Sbjct: 708  -----------MSTKGKS-SDQLEVFFEGLCKFARYSKFETCGTIRSGDLLNSASVVCSL 767

Query: 402  EFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKNHIA 461
             FD D+E  A AG+S+ IK+F+F++ +NE   VH+P+VEM  +SKLSC+ WN Y KN++A
Sbjct: 768  SFDPDEEHIAAAGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSKLSCVCWNSYIKNYLA 827

Query: 462  SSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEA 521
            S+DY+G+V +WD  T Q   +Y EH+KRAWSVDFS S+P+  VSGSDDC VK+W   ++ 
Sbjct: 828  STDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSINEKR 887

Query: 522  SVFNIDMKANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKF 581
            S+  I   ANVC V+++  S+  +A GSAD+ ++ YDLR +  P     GH+KAVSYVKF
Sbjct: 888  SLGTIWSPANVCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKF 947

Query: 582  LSNNELASASTDSTLRLWDVKE------NLPLCA--YRGHTNEKNFVGLTVNCEYIACGS 641
            + +  + SASTD++L+LW++ +      +   C+  Y+GHTN+KNFVGL+V   YIACGS
Sbjct: 948  MDSETIVSASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHTNQKNFVGLSVLDGYIACGS 1007

Query: 642  ETNEVYIYHKAISKPMAWNRFSS-DSEDNDE--DAGSYFISAVCWKSDSPTILTANSQGT 690
            ETNEVY Y+K++  PM   +F S D    +E  D    F+S+VCW+  S  ++ ANS G 
Sbjct: 1008 ETNEVYSYYKSLPMPMTSYKFGSVDPISGNEYFDDNGQFVSSVCWRKKSNMLVAANSTGN 1028

[Close]
BLAST of Sed0017890 vs. TAIR 10
Match: AT4G11110.1 (SPA1-related 2 )

HSP 1 Score: 334.0 bits (855), Expect = 3.0e-91
Identity = 168/369 (45.53%), Postives = 241/369 (65.31%), Query Frame = 0 

Query: 335  KQMLKQED---GDIKFSRGESYSPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIV 394
            + +L+  D    +++ S   S    +  F   L  + RYS+      LR  +L +++N++
Sbjct: 667  RDLLRNSDNTVAEVENSETWSSDDRVGAFFDGLCKYARYSKFETRGVLRTSELNNTSNVI 726

Query: 395  SSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKN 454
             S+ FDRD+++FATAGVS+ IK++EF+S+ NE  D+H+P +EM  RSKLS + WN Y +N
Sbjct: 727  CSLGFDRDEDYFATAGVSKKIKIYEFNSLFNESVDIHYPAIEMPNRSKLSGVCWNNYIRN 786

Query: 455  HIASSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTR 514
            ++ASSDY+GIV +WDV T Q++  + EHEKRAWSVDFS + P+ L SGSDDC VK+W   
Sbjct: 787  YLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNIN 846

Query: 515  QEASVFNIDMKANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSY 574
            +   +  I   ANVC V+++P SS  +A GS+D   + YDLRN+  P  + +GH KAVSY
Sbjct: 847  ERNCLGTIRNIANVCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVSY 906

Query: 575  VKFLSNNELASASTDSTLRLWDVKE--------NLPLCAYRGHTNEKNFVGLTVNCEYIA 634
             KFL N  L +ASTD+TL+LWD+K+        N     + GHTNEKNFVGL+ +  YIA
Sbjct: 907  AKFLDNETLVTASTDNTLKLWDLKKTTHGGLSTNACSLTFGGHTNEKNFVGLSTSDGYIA 966

Query: 635  CGSETNEVYIYHKAISKPMAWNRFSS---DSEDNDEDAGSYFISAVCWKSDSPTILTANS 690
            CGSETNEVY YH+++  P+   +F S    S    E+  + F+S+VCW+  S  +++A+S
Sbjct: 967  CGSETNEVYAYHRSLPMPITSYKFGSIDPISGKEIEEDNNLFVSSVCWRKRSNMVVSASS 1026

The following BLAST results are available for this feature:
BLAST of Sed0017890 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022142505.10.0e+0090.37E3 ubiquitin-protein ligase COP1-like [Momordica charantia][more]
XP_038894733.10.0e+0089.46E3 ubiquitin-protein ligase COP1-like [Benincasa hispida][more]
XP_022955102.10.0e+0088.68E3 ubiquitin-protein ligase COP1-like [Cucurbita moschata][more]
XP_023523813.10.0e+0088.70E3 ubiquitin-protein ligase COP1-like [Cucurbita pepo subsp. pepo][more]
XP_022994223.10.0e+0089.05E3 ubiquitin-protein ligase COP1-like [Cucurbita maxima][more]
BLAST of Sed0017890 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P432542.7e-26769.37E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV... [more]
P934713.6e-25968.32E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1[more]
Q8NHY26.8e-12539.94E3 ubiquitin-protein ligase COP1 OS=Homo sapiens OX=9606 GN=COP1 PE=1 SV=1[more]
Q9R1A88.9e-12539.94E3 ubiquitin-protein ligase COP1 OS=Mus musculus OX=10090 GN=Cop1 PE=1 SV=2[more]
Q94BM74.7e-9437.45Protein SPA1-RELATED 4 OS=Arabidopsis thaliana OX=3702 GN=SPA4 PE=1 SV=1[more]
BLAST of Sed0017890 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CL470.0e+0090.37E3 ubiquitin-protein ligase COP1-like OS=Momordica charantia OX=3673 GN=LOC11101... [more]
A0A6J1GSN70.0e+0088.68E3 ubiquitin-protein ligase COP1-like OS=Cucurbita moschata OX=3662 GN=LOC111457... [more]
A0A6J1K4K90.0e+0089.05E3 ubiquitin-protein ligase COP1-like OS=Cucurbita maxima OX=3661 GN=LOC11149002... [more]
A0A5A7TIH50.0e+0088.54E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A1S3C9540.0e+0088.54E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo OX=3656 GN=LOC103498239 PE... [more]
BLAST of Sed0017890 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G32950.11.9e-26869.37Transducin/WD40 repeat-like superfamily protein [more]
AT1G53090.13.4e-9537.45SPA1-related 4 [more]
AT1G53090.23.4e-9537.45SPA1-related 4 [more]
AT2G46340.11.6e-9237.18SPA (suppressor of phyA-105) protein family [more]
AT4G11110.13.0e-9145.53SPA1-related 2 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 190..217
NoneNo IPR availableCOILSCoilCoilcoord: 153..176
NoneNo IPR availablePFAMPF13923zf-C3HC4_2coord: 67..104
e-value: 4.8E-10
score: 39.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..43
NoneNo IPR availablePANTHERPTHR44080:SF2E3 UBIQUITIN-PROTEIN LIGASE COP1coord: 41..690
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 562..595
score: 10.601049
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 476..508
score: 8.597424
NoneNo IPR availableCDDcd16504RING-HC_COP1coord: 63..108
e-value: 5.93074E-21
score: 84.2321
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 59..125
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 372..416
e-value: 0.46
score: 19.2
coord: 469..509
e-value: 1.7E-7
score: 40.9
coord: 596..635
e-value: 19.0
score: 9.0
coord: 510..551
e-value: 0.21
score: 20.7
coord: 555..593
e-value: 9.3E-8
score: 41.8
coord: 649..688
e-value: 150.0
score: 3.2
coord: 427..466
e-value: 2.1
score: 15.0
IPR001680WD40 repeatPFAMPF00400WD40coord: 471..508
e-value: 0.0015
score: 19.3
coord: 557..593
e-value: 4.4E-5
score: 24.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 476..508
score: 10.207686
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 562..595
score: 12.74747
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 67..104
e-value: 2.1E-6
score: 37.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 67..104
score: 11.928664
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 359..691
e-value: 5.7E-147
score: 491.0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 43..156
e-value: 6.7E-20
score: 73.0
IPR042755E3 ubiquitin-protein ligase COP1PANTHERPTHR44080E3 UBIQUITIN-PROTEIN LIGASE COP1coord: 41..690
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 82..91
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 580..594
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 389..686

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0017890.1Sed0017890.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0016567 protein ubiquitination
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0061630 ubiquitin protein ligase activity