Sed0017876 (gene) Chayote v1

Overview


Name	Sed0017876
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ras-related protein RABH1b
Location	LG05: 2013155 .. 2018790 (-)
RNA-Seq Expression	Sed0017876
Synteny	Sed0017876

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGTGGCAAAGATTATAGATACTTAAACGAGAGTAGTGCGAAACTGAAAGCAGAATTCCAGATCAAAGAAAAACCAGAGCTTCCATTGCAACTGCCCGTCTCATTCACAAATCTCCATCTTCATCGCACAATTCTTCCTCTGTGCGAATCGCGAATCGGAGATCTCTGCACAAATGGCACCGACATCGGCTCTGGCGAAGTACAAGCTTGTATTTCTCGGAGATCAGTCCGTTGGCAAAACCAGCATCATTACACGCTTCATGTACGACAAATTCGACAATACGTATCAGGTAATTAATGGATGGATTGTTGATTGCGTAGATCCTTGTTTGTATTGCACGTTGCGGCTGGATCGGTTCGGAATCTGTTGCTGAATGCCTGATCCTAATGGTTTCATTTTAGTTTTGATTTATGTTGATTATTTGCGGTTTTCGTTTTTTCTATTTCGTCTGGTTGTGATATTGGCGAGGACGAGAACTCGGTGTTTCTGTTTTTGGATCTTTTGGTTGTGATCGGCATTTTTTTCTTGCTCACTGTGTATTTGTTTGAATGTATTGGTTCTTAGTCAAGATGTGCAGTAATCGAGCATAAATCTTAGTCGGCGATTCGAACGTTGCTAATTATGTTCAGATTTTAGCATTGTTTGTTGTCAACAGCATTTGTTTTCACCATAGTACCTGTATATTCTGTAGGCCTTGCAGAATTGAATCGAAATGAGAAGGGTGGATTTTCAGCTAATTTTAATTTAGATCGTTATTCTGGAATTATACTCTGATTTCTGGCTAATTTTTTGTGGGCGAAAAAGCTTTTTGGTTCTTCTCCGGTTTTACTTTGTTGAATTATTAAAATAGTATGTTTGCTGGTTTTGTACGATTGATAAACAACCACTGTTATGTGACCCCCTCCATGGAGTTGCTTTGGCATTGCTAAGTATCCAATGTCTAATCGGATGGTGCAATTATGTGTTTCTTCCATGTATGTTAAAGATGCTTTGATTGTCTGAGATATCGACAAAGATTTGTGATCGTCTTCACCTTCATTTTTGCCATTTTAATTACATCAAGTTGCTACACAGTATGAAAAGTGATGTGTCTTTCGTGCATTAACCGCATGACATGATAAATCCTAGTTTTGGACTCTTGGGACATTTTTTTTCACTGCTTCTATGAAGAAGAAGATGTATAAAGAGCGATCAATGTCCAGTGGACATCTGAATTGTCCTACTGATTGGTTTTTAAGTAGTTAAGAACTAAGAACTGAAGGTACTGATTCATTTTTTCCTTCATTGTGTTTATATTGATCATTATTATTTAAGTTATTCTGATGTTGTTCCGAGTGCATCAATTGGAGATCTAAAAAAAGTAAGAAAAAGAGAAAAAGAAAGAAAGAGTGTGCATCAATTGGAGCTTTGTGCATAATGCTTTTTGTGATGATTTTCTTTTAGTCTTGACCAAATAGGGAGTTCTTGTAATTACTTGTGGATCAAATGTATGCATTATCTTTTCATTGTATTCCTTTTTTTATGGGTGGTAGATATATAGTTCCTTGTCTCTTGATGTTTGTTTTTTTTTCTTTTTCTTTTTAATTTCTGTTGGATACTAGTTTCAAATTCATACCTCACGTTTACTTCTTGCAATATGTTAATTTATGTCCCTCTGTTCAGGCTACAATTGGTATTGATTTTCTCTCAAAAACTATGTATCTTGAAGATCGCACTGTTCGACTGCAGCTGTGGTAAGACTCAATATATTTTACTTTCTATTGGTTTTAATAATTGACATTACTTTTCTATCTGAATTGTCATTGATCACATTTTGTGCTTGTATATTAAGCAAGCATGTGATTTGTTTGTCCTAGAGAATTAGAAACTTATGTGGTTTATATGCTCGAAAGTCAAGTTCATGGTCTAAATGATAGATTTCAAACAACGCAAGCAACCCAATATAGCTATTCCTTCTGATTAAATATATTCTCTTTGGCAACTTTTAAATAAATTGCAAGTGCGTTCCCTTGAGGAGGAAATCTGAAAGTCTTGCATTTGGAATTCCTTACTTGGAGAAAAATTAGAAAAAAAAAAAAAAAATCTAATTGGTATGCGGCTCCTGTCTGTAGAGGATGGGAGGCTCAATAGAATTCATCCCCAACAAAAACAATTCTTTGAACGAATGGGGAATCATTTCATTAGAATTCTGTGGCTTCTTTTTGGGCATATCTCGCCAATATTTTTTGTCAACATTATTCTTTTTAACTTGACCAATTGGAGAGGGTTGAGGATCACGCAAATGGAAAGATGGAAAAATCTCACAATATTTATAACTTGAACGAACTACTCTTTTCATTGCCAATCGGTTTTGAGAAAAATCTCATTCATATATAATATGGTATTAGAGTCTATAAAGCTCAAACGGGTATTCGGTTGAAACTAAAGAAATTAAAACCCGATAAAAAAAAAGTCCGATCAAAGAATGGTTAACCCAAGGAGGCACTATTTTGAGGGGCACGTAGAGGATCTCACAATGGCAAGATCTATTGGTTTATAAGATACGTGAGCTAGTCTCCCGTTGCCAATTGATTTTTTATGGAACCTCTTGTTTATTTAATAGAGGGCTATCATTATTATTATTATTATTATATATCCTTGATTATTTGGGTTAGTTTATACATCTCGACTATTCTAATGGACATACGACCCGATCCTACGACATTTAGATTTCAAGGAAACCCATAGAAAATTAATTCCTAGATAAGTGGCCCCCATGAATTGACCCCATCGCCTTTTAGTGTTATTATTCTAGAAGCTAGGTAACAAACAATATTTAATATATCTATGCCATCTCTACGTTTTCCATCAATAAAAACTGAAAGTAACGTTACAGGTGCCCTTGTTAGTTTACCTTTGTTTGATGAGCAGAATGTTAAATTTTGTCTTATGATACTTCTAATTCTATTAAACTGGAGGGATCAACTTCTTCATTTGTCCTTCTAATTCTAAAAATGGGGTTTGCTGTGCATTTAACGTTTTATGTTACTTTGTTTCTCAGGGACACTGCTGGACAGGAAAGATTCAGAAGTTTAATACCAAGCTATATCAGGGATTCATCTGTCGCTGTTATCGTTTATGATGTTGCAAGTATGTATTCTGAAACATTCTATAGAATGAGAATAATGCAAACCACTGGAATATGTGTATTTGGTATGATTGATGTTGTGGTAAAATGAAACCATTTCTATACTCCTGGGGTGGATCTGGGTTCTGATAGCTGAGCCTCAAGTTCTTAATCACATATAGTTACTTGATGTGCTCAAAGGTTTAGTGTTAACTGTTTTCAATTTATTGCTACTTAGGCCGGCAAACTTTCCTAAACACTATAAAATGGATCGAGGAGGTGCGCACTGAGAGGGGCAGTGATGTTATTATAGTGCTTGTTGGGAACAAAACTGATCTTGTGGAGAAGAGGTAGTAGTTGCCTCTGCCTATGGATTTTATTTCTTGTGTATATTCTATCTTTCTTCTCTTATTTTTATTATGTTTTTTCTTTCCTTTATTATTATTACTATTTACTACTACTGTTATTAGCAAATCTTTTTGGTTTTTTAATTACTCACTGTGAAGCTTAACTTGTACATAAAACTAAGAAGCATGGACATTTTAGTTTGACTAGCAAGTTCGTGTCCACACTTGGGCACTTCGACACTTATTAAAGATGTATTGGACACTTTGACACTTATTAAACACGTACTGGACACTTGTTAGCACAATAAAGATAGACATTGTAAAACACTAGTTGTACAAGGTCAATATGGGTCCAACATTTGTTAGACACACATCAACACTTGTGAAGTATACTAAATAGACTCATGAGAATTTACACCAAACGTATTTTGTAAGCATACAAATACATAATTCTATGACTTTGATTTTCCAGGTCCAAATGTGATTTGTATTTTGATAAACGCGTCTCTGTTGTGTGAGTGTCCATTTTCGAGGTTATTACAAACTGATGCGTCTTTGTATCCATGTCGTGTCGATTCGTCTCTCATATTAGTACATGTGCATCTTAGTTGCTCAGTTGATCACTACACATTTATAATTAGGATTAAATATCCAAATTTTTACCTCCATATCGTCAACTCAACTATTCATGTTGAGCCTACTCAGCAAAGAATTTGTAAGTTAGTGCGTGCATATTTATTATATAATCTTACCCATAGTATGTTATGTGTGACGGAAAAGTAAATATTATATTTACATGGCGCACTTATGTCAAAAAAATGTTTAAATAGCACATGATGTTATGATCTACCTCTGTTTTTGCTCCTATATTTTCGAAGGAAAATAGGTTTCAATTTTAATAAGCCTTTTCTTTTCCTTTTTCTCTTACATTCCTAAAAAGTCTAGTCTTGTTTGGCATAGTCTCACCATCGTCTCTCATGTGCATGATTCCAGGCAAGTCTCTATAGAGGAAGGAGAAGCCAAAGCCCGTGAATTGAATGTCATGTTTATTGAAACAAGTGCAAAAGCTGGATTCAATATCAAGGTAAGCCATTATGAAAATTTATCCATTATCGGATACTTGCAGATTGTGAATCTAATATCGATCAATGCTTCTCATCTGCTGTATACTCTTGAAGTAGAAGCAAATACTTAGAGACTTAGAGTTACTTTATTTTTTGACAAAGATTAAATCAAAACACCTCATAAAGTTACGCTACTAAATAATCAAAGTAGATATAAAGCATTGTATACAGCAGATTCTTTAAGTTCTTCGTAGGAATGTGTGTCTGAGTCAGTTTGCACGCACTTCGATTATTCTCATGGATATGTCGCTTAATTTTACAACATTTAGATGTCAAGGAAACTCGTAGGAATTTCATTTCTAGATAGGTGGTTACCATATATTGAACACAATTTTTTGGTTTTTTAAGATCCTCTTGATCACTAGTTACTCACGGTGGTTAACTTTCTTTTCATTCTCAAACGGATGTCTCATAATGAAAAAGTCAATAAGGTTAGAAACTTCCCTAGGCCTGGGGTGCTATACTTTCTAATGGCTAAGTTGGCAACACTATAATTTGTGCAGGCACTGTTCCGAAAAATTGCTGCAGCATTGCCAGGAATGGAAACTCTGTCTTCAACAAAGCAAGAAGACATGGTTGATGTTAACCTGAAGTCCTCGGGCAGTGGCGCTGCACAACAGCAACAGTCGGGTGGATGCGCCTGCTAAATGAAGCTCGACACGAGGGAATCGCTCTTTCTTGCCTTTTGCTTTCAACACCTCAGCCTTCTAGAACTGTGAGCATTCAGGTACAAGATGTGGTGGTTATATATCTATCAATGCCTGGTTGAGCAACTAAATTCATAAAATGTTGTTGGTGGCCAGAGTAAACTGTTATTTTATGAAGTAATTTGATGTATTGGTGGAATCATTATTTTTGGGTTCTGGGATTTGGAAGGTGTAAAAAATAGAAAATTAATCTGTGTCGTATTCGATTACAGAATTTTGCTTCTTTAGTTTAAGTTTTAATTCATCTCTAGGAATTCTGCAAATTTCATCTGTTTTTACAATGGATTGTTTGTTGCCATATTATGCTTTTGGTGGTTCATTTGATTATTTGATAAATGGTTTCATATTTTA

mRNA sequence

CGGTGGCAAAGATTATAGATACTTAAACGAGAGTAGTGCGAAACTGAAAGCAGAATTCCAGATCAAAGAAAAACCAGAGCTTCCATTGCAACTGCCCGTCTCATTCACAAATCTCCATCTTCATCGCACAATTCTTCCTCTGTGCGAATCGCGAATCGGAGATCTCTGCACAAATGGCACCGACATCGGCTCTGGCGAAGTACAAGCTTGTATTTCTCGGAGATCAGTCCGTTGGCAAAACCAGCATCATTACACGCTTCATGTACGACAAATTCGACAATACGTATCAGGCTACAATTGGTATTGATTTTCTCTCAAAAACTATGTATCTTGAAGATCGCACTGTTCGACTGCAGCTGTGGGACACTGCTGGACAGGAAAGATTCAGAAGTTTAATACCAAGCTATATCAGGGATTCATCTGTCGCTGTTATCGTTTATGATGTTGCAAGCCGGCAAACTTTCCTAAACACTATAAAATGGATCGAGGAGGTGCGCACTGAGAGGGGCAGTGATGTTATTATAGTGCTTGTTGGGAACAAAACTGATCTTGTGGAGAAGAGGCAAGTCTCTATAGAGGAAGGAGAAGCCAAAGCCCGTGAATTGAATGTCATGTTTATTGAAACAAGTGCAAAAGCTGGATTCAATATCAAGGCACTGTTCCGAAAAATTGCTGCAGCATTGCCAGGAATGGAAACTCTGTCTTCAACAAAGCAAGAAGACATGGTTGATGTTAACCTGAAGTCCTCGGGCAGTGGCGCTGCACAACAGCAACAGTCGGGTGGATGCGCCTGCTAAATGAAGCTCGACACGAGGGAATCGCTCTTTCTTGCCTTTTGCTTTCAACACCTCAGCCTTCTAGAACTGTGAGCATTCAGGTACAAGATGTGGTGGTTATATATCTATCAATGCCTGGTTGAGCAACTAAATTCATAAAATGTTGTTGGTGGCCAGAGTAAACTGTTATTTTATGAAGTAATTTGATGTATTGGTGGAATCATTATTTTTGGGTTCTGGGATTTGGAAGGTGTAAAAAATAGAAAATTAATCTGTGTCGTATTCGATTACAGAATTTTGCTTCTTTAGTTTAAGTTTTAATTCATCTCTAGGAATTCTGCAAATTTCATCTGTTTTTACAATGGATTGTTTGTTGCCATATTATGCTTTTGGTGGTTCATTTGATTATTTGATAAATGGTTTCATATTTTA

Coding sequence (CDS)

ATGGCACCGACATCGGCTCTGGCGAAGTACAAGCTTGTATTTCTCGGAGATCAGTCCGTTGGCAAAACCAGCATCATTACACGCTTCATGTACGACAAATTCGACAATACGTATCAGGCTACAATTGGTATTGATTTTCTCTCAAAAACTATGTATCTTGAAGATCGCACTGTTCGACTGCAGCTGTGGGACACTGCTGGACAGGAAAGATTCAGAAGTTTAATACCAAGCTATATCAGGGATTCATCTGTCGCTGTTATCGTTTATGATGTTGCAAGCCGGCAAACTTTCCTAAACACTATAAAATGGATCGAGGAGGTGCGCACTGAGAGGGGCAGTGATGTTATTATAGTGCTTGTTGGGAACAAAACTGATCTTGTGGAGAAGAGGCAAGTCTCTATAGAGGAAGGAGAAGCCAAAGCCCGTGAATTGAATGTCATGTTTATTGAAACAAGTGCAAAAGCTGGATTCAATATCAAGGCACTGTTCCGAAAAATTGCTGCAGCATTGCCAGGAATGGAAACTCTGTCTTCAACAAAGCAAGAAGACATGGTTGATGTTAACCTGAAGTCCTCGGGCAGTGGCGCTGCACAACAGCAACAGTCGGGTGGATGCGCCTGCTAA

Protein sequence

MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTIKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSSGSGAAQQQQSGGCAC

Homology

[Close]

BLAST of Sed0017876 vs. NCBI nr
Match: XP_038889006.1 (ras-related protein RABH1b [Benincasa hispida])

HSP 1 Score: 385.2 bits (988), Expect = 3.6e-103
Identity = 204/208 (98.08%), Postives = 205/208 (98.56%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTIKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNT KWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQQQ-QSGGCAC 208
           QEDMVDVNLKS+GSGAAQ Q QSGGCAC
Sbjct: 181 QEDMVDVNLKSTGSGAAQSQPQSGGCAC 208

[Close]

BLAST of Sed0017876 vs. NCBI nr
Match: XP_022958673.1 (ras-related protein RABH1b [Cucurbita moschata] >XP_023533385.1 ras-related protein RABH1b [Cucurbita pepo subsp. pepo] >KAG6606223.1 Ras-related protein RABH1b, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 384.8 bits (987), Expect = 4.7e-103
Identity = 203/208 (97.60%), Postives = 205/208 (98.56%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTIKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTF+NT KWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVS+EEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSVEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQQQ-QSGGCAC 208
           QEDMVDVNLKSSGSGAAQ Q QSGGCAC
Sbjct: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 208

[Close]

BLAST of Sed0017876 vs. NCBI nr
Match: KAG7036170.1 (Ras-related protein RABH1b, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 384.8 bits (987), Expect = 4.7e-103
Identity = 203/208 (97.60%), Postives = 205/208 (98.56%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 45  MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 104

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTIKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTF+NT KWIEEVRTERGSDVIIVLV
Sbjct: 105 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 164

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVS+EEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 165 GNKTDLVEKRQVSVEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 224

Query: 181 QEDMVDVNLKSSGSGAAQQQ-QSGGCAC 208
           QEDMVDVNLKSSGSGAAQ Q QSGGCAC
Sbjct: 225 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 252

[Close]

BLAST of Sed0017876 vs. NCBI nr
Match: XP_022159735.1 (ras-related protein RABH1b [Momordica charantia])

HSP 1 Score: 384.4 bits (986), Expect = 6.1e-103
Identity = 204/208 (98.08%), Postives = 204/208 (98.08%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTIKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNT KWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQQQ-QSGGCAC 208
           QEDMVDVNLKSSGSGAAQ Q QSGGCAC
Sbjct: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 208

[Close]

BLAST of Sed0017876 vs. NCBI nr
Match: XP_023542507.1 (ras-related protein RABH1b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 383.6 bits (984), Expect = 1.0e-102
Identity = 203/208 (97.60%), Postives = 205/208 (98.56%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTIKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVASRQTF+NT KWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180

Query: 181 QEDMVDVNLKSSGSGAAQ-QQQSGGCAC 208
           QEDMVDVNLKSSGSGAAQ QQQSGGCAC
Sbjct: 181 QEDMVDVNLKSSGSGAAQSQQQSGGCAC 208

[Close]

BLAST of Sed0017876 vs. ExPASy Swiss-Prot
Match: O80501 (Ras-related protein RABH1b OS=Arabidopsis thaliana OX=3702 GN=RABH1B PE=1 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 2.0e-101
Identity = 194/208 (93.27%), Postives = 201/208 (96.63%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTIKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQ+FLNT KWI+EVRTERGSDVI+VLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLV+KRQVSIEE EAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAA-QQQQSGGCAC 208
           QEDMVDVNLKSS + A+  QQQSGGC+C
Sbjct: 181 QEDMVDVNLKSSNANASLAQQQSGGCSC 208

[Close]

BLAST of Sed0017876 vs. ExPASy Swiss-Prot
Match: Q9LFT9 (Ras-related protein RABH1e OS=Arabidopsis thaliana OX=3702 GN=RABH1E PE=2 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 5.8e-96
Identity = 183/207 (88.41%), Postives = 193/207 (93.24%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MA  S LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTIKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVA+RQ+FLNT KWIE+VRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLV+KRQVSIEEG+ KAR+  V+FIETSAKAGFNIK LFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGDNKARDYGVIFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQQQQSGGCAC 208
           QEDMVDVNLK+S + A  +QQ GGCAC
Sbjct: 181 QEDMVDVNLKTSSNSAQGEQQRGGCAC 207

[Close]

BLAST of Sed0017876 vs. ExPASy Swiss-Prot
Match: Q9SID8 (Ras-related protein RABH1d OS=Arabidopsis thaliana OX=3702 GN=RABH1D PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 1.2e-90
Identity = 173/207 (83.57%), Postives = 184/207 (88.89%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MA  S LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTIKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVA+R +FLNT KWIEEVR ER  DVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSKWIEEVRNERAGDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVSIEEG++K RE  VMFIETSAKAGFNIK LFRKIAAALPGME+ S+TK
Sbjct: 121 GNKTDLVEKRQVSIEEGDSKGREYGVMFIETSAKAGFNIKPLFRKIAAALPGMESYSNTK 180

Query: 181 QEDMVDVNLKSSGSGAAQQQQSGGCAC 208
            EDMVDVNLK + + +   QQ G C+C
Sbjct: 181 NEDMVDVNLKPTSNSSQGDQQGGACSC 207

[Close]

BLAST of Sed0017876 vs. ExPASy Swiss-Prot
Match: Q9SMR4 (Ras-related protein RABH1c OS=Arabidopsis thaliana OX=3702 GN=RABH1C PE=1 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.1e-83
Identity = 166/214 (77.57%), Postives = 185/214 (86.45%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MA  S LAK+KLVFLGDQSVGKTSIITRFMYDKFD TYQ TIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTIKWIEEVRTERG-SDVIIVL 120
           QLWDTAGQERFRSLIPSYIRDSSVA++VYDV++RQTFLNT KWIE+V  ERG S+VIIVL
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVL 120

Query: 121 VGNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLS-S 180
           VGNKTDLVEKRQVSI EGE K +E  VMFIETSAK  FNIKALFRKIAAALPG+++ S +
Sbjct: 121 VGNKTDLVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPGVDSYSLA 180

Query: 181 TKQEDMVDVNLKSSGSGAAQQQQ-----SGGCAC 208
           TK +DMVDVNLK++ + +  +QQ      GGC+C
Sbjct: 181 TKSDDMVDVNLKTTSNSSQGEQQGGAGGGGGCSC 214

[Close]

BLAST of Sed0017876 vs. ExPASy Swiss-Prot
Match: P20340 (Ras-related protein Rab-6A OS=Homo sapiens OX=9606 GN=RAB6A PE=1 SV=3)

HSP 1 Score: 300.1 bits (767), Expect = 2.0e-80
Identity = 150/201 (74.63%), Postives = 173/201 (86.07%), Query Frame = 0


Query: 7   LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
           L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA
Sbjct: 11  LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70

Query: 67  GQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTIKWIEEVRTERGSDVIIVLVGNKTDL 126
           GQERFRSLIPSYIRDS+VAV+VYD+ +  +F  T KWI++VRTERGSDVII+LVGNKTDL
Sbjct: 71  GQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDL 130

Query: 127 VEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVD 186
            +KRQVSIEEGE KA+ELNVMFIETSAKAG+N+K LFR++AAALPGME+     +EDM+D
Sbjct: 131 ADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMID 190

Query: 187 VNLKSSGSGAAQQQQSGGCAC 208
           + L+       Q    GGC+C
Sbjct: 191 IKLEKP---QEQPVSEGGCSC 208

[Close]

BLAST of Sed0017876 vs. ExPASy TrEMBL
Match: A0A6J1H3Q8 (ras-related protein RABH1b OS=Cucurbita moschata OX=3662 GN=LOC111459827 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.3e-103
Identity = 203/208 (97.60%), Postives = 205/208 (98.56%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTIKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTF+NT KWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVS+EEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSVEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQQQ-QSGGCAC 208
           QEDMVDVNLKSSGSGAAQ Q QSGGCAC
Sbjct: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 208

[Close]

BLAST of Sed0017876 vs. ExPASy TrEMBL
Match: A0A6J1DZL5 (ras-related protein RABH1b OS=Momordica charantia OX=3673 GN=LOC111026075 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.0e-103
Identity = 204/208 (98.08%), Postives = 204/208 (98.08%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTIKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNT KWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQQQ-QSGGCAC 208
           QEDMVDVNLKSSGSGAAQ Q QSGGCAC
Sbjct: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 208

[Close]

BLAST of Sed0017876 vs. ExPASy TrEMBL
Match: A0A6J1K5U1 (ras-related protein RABH1b OS=Cucurbita maxima OX=3661 GN=LOC111491433 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 5.1e-103
Identity = 202/208 (97.12%), Postives = 205/208 (98.56%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTIKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTF+NT KWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVS+EEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSVEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQQQ-QSGGCAC 208
           QEDMVDVNLKS+GSGAAQ Q QSGGCAC
Sbjct: 181 QEDMVDVNLKSTGSGAAQSQPQSGGCAC 208

[Close]

BLAST of Sed0017876 vs. ExPASy TrEMBL
Match: A0A6J1F3M2 (ras-related protein RABH1b-like OS=Cucurbita moschata OX=3662 GN=LOC111439590 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 6.6e-103
Identity = 202/208 (97.12%), Postives = 205/208 (98.56%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTIKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVASRQTF+NT KWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVS+EEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVEKRQVSVEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180

Query: 181 QEDMVDVNLKSSGSGAAQ-QQQSGGCAC 208
           QEDMVDVNLKSSGSGAAQ QQQSGGCAC
Sbjct: 181 QEDMVDVNLKSSGSGAAQSQQQSGGCAC 208

[Close]

BLAST of Sed0017876 vs. ExPASy TrEMBL
Match: A0A5A7TB19 (Ras-related protein RABH1b-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004050 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 8.6e-103
Identity = 203/208 (97.60%), Postives = 204/208 (98.08%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTIKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNT KWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQQQ-QSGGCAC 208
           QEDMVDVNLKS+GSGAAQ Q QS GCAC
Sbjct: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 208

[Close]

BLAST of Sed0017876 vs. TAIR 10
Match: AT2G44610.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 369.8 bits (948), Expect = 1.5e-102
Identity = 194/208 (93.27%), Postives = 201/208 (96.63%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTIKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQ+FLNT KWI+EVRTERGSDVI+VLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLV+KRQVSIEE EAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAA-QQQQSGGCAC 208
           QEDMVDVNLKSS + A+  QQQSGGC+C
Sbjct: 181 QEDMVDVNLKSSNANASLAQQQSGGCSC 208

[Close]

BLAST of Sed0017876 vs. TAIR 10
Match: AT5G10260.1 (RAB GTPase homolog H1E )

HSP 1 Score: 351.7 bits (901), Expect = 4.1e-97
Identity = 183/207 (88.41%), Postives = 193/207 (93.24%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MA  S LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTIKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVA+RQ+FLNT KWIE+VRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLV+KRQVSIEEG+ KAR+  V+FIETSAKAGFNIK LFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGDNKARDYGVIFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQQQQSGGCAC 208
           QEDMVDVNLK+S + A  +QQ GGCAC
Sbjct: 181 QEDMVDVNLKTSSNSAQGEQQRGGCAC 207

[Close]

BLAST of Sed0017876 vs. TAIR 10
Match: AT2G22290.1 (RAB GTPase homolog H1D )

HSP 1 Score: 334.0 bits (855), Expect = 8.8e-92
Identity = 173/207 (83.57%), Postives = 184/207 (88.89%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MA  S LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTIKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVA+R +FLNT KWIEEVR ER  DVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSKWIEEVRNERAGDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVSIEEG++K RE  VMFIETSAKAGFNIK LFRKIAAALPGME+ S+TK
Sbjct: 121 GNKTDLVEKRQVSIEEGDSKGREYGVMFIETSAKAGFNIKPLFRKIAAALPGMESYSNTK 180

Query: 181 QEDMVDVNLKSSGSGAAQQQQSGGCAC 208
            EDMVDVNLK + + +   QQ G C+C
Sbjct: 181 NEDMVDVNLKPTSNSSQGDQQGGACSC 207

[Close]

BLAST of Sed0017876 vs. TAIR 10
Match: AT4G39890.1 (RAB GTPase homolog H1C )

HSP 1 Score: 310.8 bits (795), Expect = 8.0e-85
Identity = 166/214 (77.57%), Postives = 185/214 (86.45%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MA  S LAK+KLVFLGDQSVGKTSIITRFMYDKFD TYQ TIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTIKWIEEVRTERG-SDVIIVL 120
           QLWDTAGQERFRSLIPSYIRDSSVA++VYDV++RQTFLNT KWIE+V  ERG S+VIIVL
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVL 120

Query: 121 VGNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLS-S 180
           VGNKTDLVEKRQVSI EGE K +E  VMFIETSAK  FNIKALFRKIAAALPG+++ S +
Sbjct: 121 VGNKTDLVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPGVDSYSLA 180

Query: 181 TKQEDMVDVNLKSSGSGAAQQQQ-----SGGCAC 208
           TK +DMVDVNLK++ + +  +QQ      GGC+C
Sbjct: 181 TKSDDMVDVNLKTTSNSSQGEQQGGAGGGGGCSC 214

[Close]

BLAST of Sed0017876 vs. TAIR 10
Match: AT5G64990.1 (RAB GTPase homolog H1A )

HSP 1 Score: 286.2 bits (731), Expect = 2.1e-77
Identity = 153/199 (76.88%), Postives = 165/199 (82.91%), Query Frame = 0


Query: 10  YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
           YKLVFLGDQ VGKTSIIT FMY KFD +YQATIGIDFLSKT   EDRT RLQLWDTAGQE
Sbjct: 8   YKLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWDTAGQE 67

Query: 70  RFRSLIPSYIRDSSVAVIVYDVASRQTFLNTIKWIEEVRTERGSDVIIVLVGNKTDLVEK 129
           RF+SL+PSYIRDSSVAVIVYDVAS+Q+F+NT KWIEEVR ERGS VIIVLVGNKTDLV K
Sbjct: 68  RFKSLVPSYIRDSSVAVIVYDVASKQSFINTSKWIEEVRAERGSYVIIVLVGNKTDLVNK 127

Query: 130 RQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNL 189
           RQVSIEEGE KARE   +F+ETSAKAGFNIK LF KI +AL G E +S TKQED+VDVNL
Sbjct: 128 RQVSIEEGENKAREFGALFMETSAKAGFNIKPLFCKITSALQGNEAVSWTKQEDLVDVNL 187

Query: 190 KS-SGSGAAQQQQSGGCAC 208
           K    S  A  QQ   C+C
Sbjct: 188 KPLMFSSQANHQQESNCSC 206

The following BLAST results are available for this feature:

BLAST of Sed0017876 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889006.1	3.6e-103	98.08	ras-related protein RABH1b [Benincasa hispida]	[more]
XP_022958673.1	4.7e-103	97.60	ras-related protein RABH1b [Cucurbita moschata] >XP_023533385.1 ras-related prot...	[more]
KAG7036170.1	4.7e-103	97.60	Ras-related protein RABH1b, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022159735.1	6.1e-103	98.08	ras-related protein RABH1b [Momordica charantia]	[more]
XP_023542507.1	1.0e-102	97.60	ras-related protein RABH1b-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0017876 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80501	2.0e-101	93.27	Ras-related protein RABH1b OS=Arabidopsis thaliana OX=3702 GN=RABH1B PE=1 SV=1	[more]
Q9LFT9	5.8e-96	88.41	Ras-related protein RABH1e OS=Arabidopsis thaliana OX=3702 GN=RABH1E PE=2 SV=1	[more]
Q9SID8	1.2e-90	83.57	Ras-related protein RABH1d OS=Arabidopsis thaliana OX=3702 GN=RABH1D PE=3 SV=1	[more]
Q9SMR4	1.1e-83	77.57	Ras-related protein RABH1c OS=Arabidopsis thaliana OX=3702 GN=RABH1C PE=1 SV=1	[more]
P20340	2.0e-80	74.63	Ras-related protein Rab-6A OS=Homo sapiens OX=9606 GN=RAB6A PE=1 SV=3	[more]

BLAST of Sed0017876 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3Q8	2.3e-103	97.60	ras-related protein RABH1b OS=Cucurbita moschata OX=3662 GN=LOC111459827 PE=4 SV...	[more]
A0A6J1DZL5	3.0e-103	98.08	ras-related protein RABH1b OS=Momordica charantia OX=3673 GN=LOC111026075 PE=4 S...	[more]
A0A6J1K5U1	5.1e-103	97.12	ras-related protein RABH1b OS=Cucurbita maxima OX=3661 GN=LOC111491433 PE=4 SV=1	[more]
A0A6J1F3M2	6.6e-103	97.12	ras-related protein RABH1b-like OS=Cucurbita moschata OX=3662 GN=LOC111439590 PE...	[more]
A0A5A7TB19	8.6e-103	97.60	Ras-related protein RABH1b-like isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of Sed0017876 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44610.1	1.5e-102	93.27	Ras-related small GTP-binding family protein	[more]
AT5G10260.1	4.1e-97	88.41	RAB GTPase homolog H1E	[more]
AT2G22290.1	8.8e-92	83.57	RAB GTPase homolog H1D	[more]
AT4G39890.1	8.0e-85	77.57	RAB GTPase homolog H1C	[more]
AT5G64990.1	2.1e-77	76.88	RAB GTPase homolog H1A	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 51..73 score: 48.05 coord: 113..126 score: 53.75 coord: 148..170 score: 36.17 coord: 10..31 score: 41.61 coord: 33..49 score: 33.83
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 7..173 e-value: 1.4E-33 score: 127.5
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 15..207 e-value: 1.9E-7 score: 40.7
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 10..173 e-value: 2.8E-86 score: 302.6
None	No IPR available	PANTHER	PTHR24073:SF1132	GTP-BINDING PROTEIN RAB6	coord: 1..207
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 1..207
None	No IPR available	PROSITE	PS51419	RAB	coord: 2..207 score: 31.304779
None	No IPR available	PROSITE	PS51420	RHO	coord: 3..176 score: 10.419104
None	No IPR available	CDD	cd01861	Rab6	coord: 10..170 e-value: 1.26563E-115 score: 324.19
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 12..172 e-value: 7.7E-14 score: 56.9
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 11..169 e-value: 3.8E-57 score: 192.4
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 5..207 score: 17.983919
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 5..203 e-value: 4.5E-66 score: 224.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..181
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 9..166 e-value: 4.2E-27 score: 92.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017876.1	Sed0017876.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0042147	retrograde transport, endosome to Golgi
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding