Sed0017859 (gene) Chayote v1

Overview


Name	Sed0017859
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Reticulon-like protein
Location	LG03: 2056531 .. 2059191 (-)
RNA-Seq Expression	Sed0017859
Synteny	Sed0017859

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGCATTCCCTTAAAATAATAGTACACGATTCCAAAATAAAGGACCTTTCATTTTCAGCGCATGAAGAACGAGAAAGGGGCAAGAACATGGAAATTAAAAATTCTTCAATTGCGCGAAACCCGTTTCTGAGTTTTGCCTTGTGAATTCTCGATCATATTCAAATCTCAAGAACATTTTGATCTTCAAATCTGACCCTTACCCTTCTTCTCCAGAATCCAGCCTGAACGGAGCAATTTCGGAAGCGCAATGGTCGACAATTCCCGCAGCGGCGACGGCAGAGACGTGGCCGGCACTTCCTACGACCGGCAAGTTTCGCTCCACCATTCCATGGGCGCCGGCAAAGGTATTCCATGCCATCTTCATCGATTTCGCGTTTCTTGATTTGATTCCATCTTTCCCCCTTTCGAAATTGATGTTCACTCTGTTGATTGCAATCTGCGATACATTAGGGTTTTGATTGTTTTCGAAATATAGGGTTATATGAAGCTAGTAATTGTTTGGCGGATTCGTCGATGATTATATTCATAACCTGTTTCCCTTTCTTGCATTTGAAATCGAGAATTTGACCGGTTGAAACTTGAAAGTACTGCTACCTTTTTCATTGGGAAATAGATTCTACACTGATTATTACAAATTGCAAGAATGGTTTCACTTTGCTGTGTTCTTAGGAGGAAAATTAGGATATCCCCTTTTCCGGTTATATTTAATGTCCGGGTCAGCTTATGCGCATTTTGACCGTTTGCACGAGGCATAACCCTAGAAAGTTTAAATGTCAAGAAACCCGTATGAAATTAGTTACCAATAGCATGTCGTCATGTACCTTTTTCCTGTTTTGATCATCAAGAATTTTGACTATTTTGCTTCTTCTGCATAGTGGCTGATATTCTACTGTGGAAACAGCACCATGTTTCTTTCGGCATTGCTGTCGGTGCTACAGTGTTTTGGATTCTAACTGAGCACTCTGGATTGCCGTTGTTGACAACATGTTCGGATGTCTTGCTGATTTTGGTTGTCCTGTGTTTTTTAGGTGCCAACTTTGCTCCATTTCAAGACAAGTATGACTATGGCTGCCTTATATTTTTTACTCACTTTGAAGATCTTGCATCATCTCATAATATTTACTTTTTGCTCATATTATCTTATCTTTCAAGAAAATTGTATGTTTTACTTTTTTCCCTGTTAGCACCCTTCATTTTCCATCTGTATGCAGGCAACTTCAAGCATTACCCCAACTAGTATTGTCAGAGGAATTTGTCAATAGCGTTGCAGCATCAGTTCGAGCGAGAGTGAATACTGGATTGCTTATGGCTCACGACATCGCACTTGGCAATGATTTTAAACTCTTTTTGAGGGTCAGTATTTGTATTTGAAGAACTATCGATACTTTATACCCTATATTATTTGATACTTTAATTAAATGGGCAAAACTGAAAATGGTTTACTAACTTAAGTATTTTTCATTTGAAAATGTCTAATATACACCATTGATGATGCCATTTAGATGTGAGAATCATAAGTTGCTCAAACATGAGGCGATGAAAGCTAGTTTAGGACAGTTTAAAGACCACACACACTTGATATTCACTCCAAGGGCATATCATTGCCTTTTGGCTTCTTCATATCTGGCTACAATAGTATGAGTAACCTTGCTCAACTTTGCAGGTGGTGGTTTATTTGTGGACTTTATCTGTCATTGGTAGCTACATTTCTTTCTTCACCTTCGCATATATCGGTATGTACGAAGATCCTAAAACACTTATGTTGCATATCTTTGTCTAAGCATGTTCTGTCATTGTCTTCGAGTTTACTTAACCTGTGATGTTGATTCTTGTTATTTGACTGGGTGAGACAGGAACAATCATCGCGATCACCGTCCCCGCCTTGTACAACAAATATGACAAACATGTTGACAGATACTTTGGAATGATCAGCAAACAATTTAGAAAGCATCCTGGTAGTTTATCCAAGGATAAAGATGAATGAAAAATCCTTCCTGTAATTTTCAACAGTTGTACTAAACCACAGGAAAATTGTAATACTCTTGCATGCATTACCTACTTAGGTTTAATGATTTGAACCATCTTGATCAGATGCCACAGGTATTTTGTTTTAGAGGTCTGAAACTTGTAAAGGGGGCAAGTTTTTGAATCTGGTTGGTCAAAGTCCAATCCTGAGTTTAAGTTCCATTTTGTCAAATATTGGTCGGCCCACAAAAGGCCCATTATTGAATACCAAACAACAATAAATCAGTTTGTTGATGATTTGACTGGGATAACCTTTCGGCTTTTGGCATATTGCCTTTCAGCTTCCTCACATCTTACCCTCTCGTGGTCTAAACTCCCAAGTCATTAGAGGCTTGTTTGGATTGATTGGTTTGAGTGTTTTACCCTCCGAAGTAACTCGGTGCATATTCTAGAGATGGATCAGTGGTGTCTAGGATATAGGATAGTAAAACTTTGTTTTCCAATTTTCAAAAAAAAAAGTCCACTTTATTTTATTTAGTTATTTTTTGAAAAAATCAAATACAACAGAACAACCAAAAGATTAGCAGGCTTCTTGATACCAGCAATGTGAAATTCAAGACAATTAATTTATATTTTGGTATGTTGTTCTCACGTTAATGTTGTAATTTATATTCAAGACAAAAATATGAAAGGAG

mRNA sequence

TAAGCATTCCCTTAAAATAATAGTACACGATTCCAAAATAAAGGACCTTTCATTTTCAGCGCATGAAGAACGAGAAAGGGGCAAGAACATGGAAATTAAAAATTCTTCAATTGCGCGAAACCCGTTTCTGAGTTTTGCCTTAATCCAGCCTGAACGGAGCAATTTCGGAAGCGCAATGGTCGACAATTCCCGCAGCGGCGACGGCAGAGACGTGGCCGGCACTTCCTACGACCGGCAAGTTTCGCTCCACCATTCCATGGGCGCCGGCAAAGTGGCTGATATTCTACTGTGGAAACAGCACCATGTTTCTTTCGGCATTGCTGTCGGTGCTACAGTGTTTTGGATTCTAACTGAGCACTCTGGATTGCCGTTGTTGACAACATGTTCGGATGTCTTGCTGATTTTGGTTGTCCTGTGTTTTTTAGGTGCCAACTTTGCTCCATTTCAAGACAAGCAACTTCAAGCATTACCCCAACTAGTATTGTCAGAGGAATTTGTCAATAGCGTTGCAGCATCAGTTCGAGCGAGAGTGAATACTGGATTGCTTATGGCTCACGACATCGCACTTGGCAATGATTTTAAACTCTTTTTGAGGGTGGTGGTTTATTTGTGGACTTTATCTGTCATTGGTAGCTACATTTCTTTCTTCACCTTCGCATATATCGGAACAATCATCGCGATCACCGTCCCCGCCTTGTACAACAAATATGACAAACATGTTGACAGATACTTTGGAATGATCAGCAAACAATTTAGAAAGCATCCTGGTAGTTTATCCAAGGATAAAGATGAATGAAAAATCCTTCCTGTAATTTTCAACAGTTGTACTAAACCACAGGAAAATTGTAATACTCTTGCATGCATTACCTACTTAGGTTTAATGATTTGAACCATCTTGATCAGATGCCACAGGTATTTTGTTTTAGAGGTCTGAAACTTGTAAAGGGGGCAAGTTTTTGAATCTGGTTGGTCAAAGTCCAATCCTGAGTTTAAGTTCCATTTTGTCAAATATTGGTCGGCCCACAAAAGGCCCATTATTGAATACCAAACAACAATAAATCAGTTTGTTGATGATTTGACTGGGATAACCTTTCGGCTTTTGGCATATTGCCTTTCAGCTTCCTCACATCTTACCCTCTCGTGGTCTAAACTCCCAAGTCATTAGAGGCTTGTTTGGATTGATTGGTTTGAGTGTTTTACCCTCCGAAGTAACTCGGTGCATATTCTAGAGATGGATCAGTGGTGTCTAGGATATAGGATAGTAAAACTTTGTTTTCCAATTTTCAAAAAAAAAAGTCCACTTTATTTTATTTAGTTATTTTTTGAAAAAATCAAATACAACAGAACAACCAAAAGATTAGCAGGCTTCTTGATACCAGCAATGTGAAATTCAAGACAATTAATTTATATTTTGGTATGTTGTTCTCACGTTAATGTTGTAATTTATATTCAAGACAAAAATATGAAAGGAG

Coding sequence (CDS)

ATGGAAATTAAAAATTCTTCAATTGCGCGAAACCCGTTTCTGAGTTTTGCCTTAATCCAGCCTGAACGGAGCAATTTCGGAAGCGCAATGGTCGACAATTCCCGCAGCGGCGACGGCAGAGACGTGGCCGGCACTTCCTACGACCGGCAAGTTTCGCTCCACCATTCCATGGGCGCCGGCAAAGTGGCTGATATTCTACTGTGGAAACAGCACCATGTTTCTTTCGGCATTGCTGTCGGTGCTACAGTGTTTTGGATTCTAACTGAGCACTCTGGATTGCCGTTGTTGACAACATGTTCGGATGTCTTGCTGATTTTGGTTGTCCTGTGTTTTTTAGGTGCCAACTTTGCTCCATTTCAAGACAAGCAACTTCAAGCATTACCCCAACTAGTATTGTCAGAGGAATTTGTCAATAGCGTTGCAGCATCAGTTCGAGCGAGAGTGAATACTGGATTGCTTATGGCTCACGACATCGCACTTGGCAATGATTTTAAACTCTTTTTGAGGGTGGTGGTTTATTTGTGGACTTTATCTGTCATTGGTAGCTACATTTCTTTCTTCACCTTCGCATATATCGGAACAATCATCGCGATCACCGTCCCCGCCTTGTACAACAAATATGACAAACATGTTGACAGATACTTTGGAATGATCAGCAAACAATTTAGAAAGCATCCTGGTAGTTTATCCAAGGATAAAGATGAATGA

Protein sequence

MEIKNSSIARNPFLSFALIQPERSNFGSAMVDNSRSGDGRDVAGTSYDRQVSLHHSMGAGKVADILLWKQHHVSFGIAVGATVFWILTEHSGLPLLTTCSDVLLILVVLCFLGANFAPFQDKQLQALPQLVLSEEFVNSVAASVRARVNTGLLMAHDIALGNDFKLFLRVVVYLWTLSVIGSYISFFTFAYIGTIIAITVPALYNKYDKHVDRYFGMISKQFRKHPGSLSKDKDE

Homology

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BLAST of Sed0017859 vs. NCBI nr
Match: XP_022993764.1 (reticulon-like protein B16 [Cucurbita maxima])

HSP 1 Score: 297.7 bits (761), Expect = 8.6e-77
Identity = 159/223 (71.30%), Postives = 177/223 (79.37%), Query Frame = 0


Query: 30  MVDNSRS-----GDGRDVAGTSYDRQVSLHHSMGAGKVADILLWKQHHVSFGIAVGATVF 89
           MVDN  S     GDG+D+A TS DR  SLH SMG GK ADILLWKQ HVSFGI V ATVF
Sbjct: 1   MVDNCDSAGNVDGDGKDIACTSCDRPASLHQSMGGGKAADILLWKQRHVSFGIVVVATVF 60

Query: 90  WILTEHSGLPLLTTCSDVLLILVVLCFLGANFAPFQDKQLQALPQLVLSEEFVNSVAASV 149
           W+L EHSGLPLLTTCSDVLL+LVVL FL ANFA F+ KQLQ LPQLVLSEEFV++VAAS 
Sbjct: 61  WLLIEHSGLPLLTTCSDVLLVLVVLLFLRANFAAFRKKQLQTLPQLVLSEEFVDNVAASF 120

Query: 150 RARVNTGLLMAHDIALGNDFKLFLRVVVYLWTLSVIGSYISFFTFAYIGTIIAITVPALY 209
           RA++N  LL+AHDI LGNDFKLF R+V+ LW LSV+GSY+SFFTFAYIGTII+ITVPALY
Sbjct: 121 RAKINNALLVAHDITLGNDFKLFFRMVICLWLLSVLGSYLSFFTFAYIGTIISITVPALY 180

Query: 210 NKYDKHVDRYFGMISKQFRKH------------PGSLSKDKDE 236
           +KYDKHVDR  GMI +QFRKH            PGSLSKDK +
Sbjct: 181 SKYDKHVDRCCGMIRQQFRKHYRVMDERVFSRLPGSLSKDKHQ 223

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BLAST of Sed0017859 vs. NCBI nr
Match: XP_022134537.1 (reticulon-like protein B16 [Momordica charantia])

HSP 1 Score: 297.0 bits (759), Expect = 1.5e-76
Identity = 156/223 (69.96%), Postives = 177/223 (79.37%), Query Frame = 0


Query: 30  MVDNSRS-----GDGRDVAGTSYDRQVSLHHSMGAGKVADILLWKQHHVSFGIAVGATVF 89
           MVDN  S     GDG+++A TS  RQVSLH S+G GKVA+I+LWKQ HVSFG+ V ATV 
Sbjct: 1   MVDNYDSAGNVEGDGKEIASTSCSRQVSLHQSIGGGKVAEIILWKQWHVSFGVLVVATVA 60

Query: 90  WILTEHSGLPLLTTCSDVLLILVVLCFLGANFAPFQDKQLQALPQLVLSEEFVNSVAASV 149
           W+L EHSGLPLLT CSDVLLILVVL FL ANFA FQ+KQLQ LPQL LSEEFVN  AAS+
Sbjct: 61  WLLIEHSGLPLLTACSDVLLILVVLLFLRANFAAFQNKQLQMLPQLALSEEFVNDAAASI 120

Query: 150 RARVNTGLLMAHDIALGNDFKLFLRVVVYLWTLSVIGSYISFFTFAYIGTIIAITVPALY 209
           RA++N  LLMAHDI LGNDF+LF RVV+ LW LSVIGSY+SFFTFAYIG II+IT+PALY
Sbjct: 121 RAKINNALLMAHDITLGNDFRLFFRVVICLWLLSVIGSYLSFFTFAYIGIIISITIPALY 180

Query: 210 NKYDKHVDRYFGMISKQFRKH------------PGSLSKDKDE 236
           NKYDKHVDRY GMIS++FRKH            PG LSK+KD+
Sbjct: 181 NKYDKHVDRYCGMISQKFRKHYRVMDESVLSKLPGELSKEKDQ 223

[Close]

BLAST of Sed0017859 vs. NCBI nr
Match: XP_008456773.1 (PREDICTED: reticulon-like protein B16 [Cucumis melo] >KAA0052008.1 reticulon-like protein B16 [Cucumis melo var. makuwa] >TYK04551.1 reticulon-like protein B16 [Cucumis melo var. makuwa])

HSP 1 Score: 295.8 bits (756), Expect = 3.3e-76
Identity = 152/210 (72.38%), Postives = 174/210 (82.86%), Query Frame = 0


Query: 38  DGRDVAGTSYDRQVSLHHSMGAGKVADILLWKQHHVSFGIAVGATVFWILTEHSGLPLLT 97
           DG+D+  TS DRQ  LH SMG GK ADILLWKQ HVSFGI V +TVFW+L EHSGLPLLT
Sbjct: 15  DGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLT 74

Query: 98  TCSDVLLILVVLCFLGANFAPFQDKQLQALPQLVLSEEFVNSVAASVRARVNTGLLMAHD 157
           TCSDVLLILVVL FL AN+A F++KQLQ LPQLVLSEEFVN+VAAS+RA++N  LLMAHD
Sbjct: 75  TCSDVLLILVVLLFLRANYAAFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHD 134

Query: 158 IALGNDFKLFLRVVVYLWTLSVIGSYISFFTFAYIGTIIAITVPALYNKYDKHVDRYFGM 217
           I LGNDFKLF R+V+ LW LSV+GSY+SFFTFAYIGTII+IT+PALY+KYDKHVDRY GM
Sbjct: 135 ITLGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYIGTIISITIPALYSKYDKHVDRYCGM 194

Query: 218 ISKQFRKH------------PGSLSKDKDE 236
           I +QFRKH            PG+LSKDK++
Sbjct: 195 IRQQFRKHYRVMDESVFSRLPGNLSKDKNQ 224

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BLAST of Sed0017859 vs. NCBI nr
Match: XP_004138395.1 (reticulon-like protein B16 isoform X1 [Cucumis sativus] >KGN45832.1 hypothetical protein Csa_004771 [Cucumis sativus])

HSP 1 Score: 295.0 bits (754), Expect = 5.5e-76
Identity = 151/214 (70.56%), Postives = 173/214 (80.84%), Query Frame = 0


Query: 34  SRSGDGRDVAGTSYDRQVSLHHSMGAGKVADILLWKQHHVSFGIAVGATVFWILTEHSGL 93
           S   DG+D+  TS DRQ  LH SMG GK ADILLWKQ HVS G+ V +TVFW+L EHSGL
Sbjct: 11  SAEADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTVFWLLIEHSGL 70

Query: 94  PLLTTCSDVLLILVVLCFLGANFAPFQDKQLQALPQLVLSEEFVNSVAASVRARVNTGLL 153
           PLLTTCSDVLLILVVL FL ANFA F++KQLQ LPQLVLSEEFVN+VAAS+RA++N  LL
Sbjct: 71  PLLTTCSDVLLILVVLLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLL 130

Query: 154 MAHDIALGNDFKLFLRVVVYLWTLSVIGSYISFFTFAYIGTIIAITVPALYNKYDKHVDR 213
           MAHDI +GNDFKLF R+V+ LW LSV+GSY+SFFTFAY+GTII+IT+PALY+KYDKHVDR
Sbjct: 131 MAHDITVGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPALYSKYDKHVDR 190

Query: 214 YFGMISKQFRKH------------PGSLSKDKDE 236
           Y GMI +QFRKH            PG LSKDKD+
Sbjct: 191 YCGMIRQQFRKHYRVMDESVFSRLPGGLSKDKDQ 224

[Close]

BLAST of Sed0017859 vs. NCBI nr
Match: XP_022923115.1 (reticulon-like protein B16 [Cucurbita moschata])

HSP 1 Score: 294.7 bits (753), Expect = 7.2e-76
Identity = 156/223 (69.96%), Postives = 176/223 (78.92%), Query Frame = 0


Query: 30  MVDNSRS-----GDGRDVAGTSYDRQVSLHHSMGAGKVADILLWKQHHVSFGIAVGATVF 89
           MVDNS S     GDG+D+A  S DRQVSLH SMG GK AD+LLWKQ HVSFGI V AT+F
Sbjct: 1   MVDNSGSAGTVEGDGKDIACISCDRQVSLHQSMGGGKAADVLLWKQRHVSFGIVVVATMF 60

Query: 90  WILTEHSGLPLLTTCSDVLLILVVLCFLGANFAPFQDKQLQALPQLVLSEEFVNSVAASV 149
           W+L EHSG+PLLT  SDVLL+LVVL FL ANFA  + K +Q LPQLVLSEEFV+SVAAS 
Sbjct: 61  WLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASF 120

Query: 150 RARVNTGLLMAHDIALGNDFKLFLRVVVYLWTLSVIGSYISFFTFAYIGTIIAITVPALY 209
           RA++N+ LLMAHDI LGNDFKLF RVV+ LW LSV+GSY+SFFT AYIGTII+ITVPALY
Sbjct: 121 RAKINSALLMAHDITLGNDFKLFFRVVICLWLLSVLGSYLSFFTLAYIGTIISITVPALY 180

Query: 210 NKYDKHVDRYFGMISKQFRKH------------PGSLSKDKDE 236
           NKYDKHVDRYFGMI ++FRKH            PGS SK KD+
Sbjct: 181 NKYDKHVDRYFGMIFQEFRKHYKVMDESVFSRLPGSFSKHKDQ 223

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BLAST of Sed0017859 vs. ExPASy Swiss-Prot
Match: Q8GYH6 (Reticulon-like protein B16 OS=Arabidopsis thaliana OX=3702 GN=RTNLB16 PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.1e-50
Identity = 105/214 (49.07%), Postives = 147/214 (68.69%), Query Frame = 0


Query: 38  DGRDVAGTSYD-----RQVSLHHSMGAGKVADILLWKQHHVSFGIAVGATVFWILTEHSG 97
           DGR+  G+S D     RQ+++H  MG GK AD+LLW++ H+S G+ + +TV W++ E SG
Sbjct: 12  DGRNEGGSSSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSG 71

Query: 98  LPLLTTCSDVLLILVVLCFLGANFAPFQDKQLQALPQLVLSEEFVNSVAASVRARVNTGL 157
           LP L+  SDVLLI++++ F+ A  + F+++QL +LP+LVLSEE VNS AAS R ++N  L
Sbjct: 72  LPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLL 131

Query: 158 LMAHDIALGNDFKLFLRVVVYLWTLSVIGSYISFFTFAYIGTIIAITVPALYNKYDKHVD 217
           +MAHD+ +GNDF+LF +VV+ LW LS IGSYIS  T  YIGTI+++T+PALY+KY   VD
Sbjct: 132 VMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVD 191

Query: 218 RYFGMISKQFRKH------------PGSLSKDKD 235
           +  G I ++   H              SLSKDKD
Sbjct: 192 KCCGTIHRRLSHHYKIVDENVISRLSWSLSKDKD 225

[Close]

BLAST of Sed0017859 vs. ExPASy Swiss-Prot
Match: Q9SS37 (Reticulon-like protein B8 OS=Arabidopsis thaliana OX=3702 GN=RTNLB8 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.4e-26
Identity = 67/204 (32.84%), Postives = 109/204 (53.43%), Query Frame = 0


Query: 22  ERSNFGSAMVDNSRSGDGRDVAGTSYDRQVSLHHSMGAGKVADILLWKQHHVSFGIAVGA 81
           +++  GS+  +   S   R      +DRQ  +HH +G GK AD+LLW+   +S  + +GA
Sbjct: 23  QKNKHGSSFFEQEDSVSSR--FNRLFDRQKPIHHVLGGGKSADVLLWRNKKISASVLMGA 82

Query: 82  TVFWILTEHSGLPLLTTCSDVLLILVVLCFLGANFAPFQDKQLQALPQLVLSEEFVNSVA 141
           T  W+L E      L+     LL+ ++  F+ +N + F ++    +P+LVL ++F   V 
Sbjct: 83  TAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVG 142

Query: 142 ASVRARVNTGLLMAHDIALGNDFKLFLRVVVYLWTLSVIGSYISFFTFAYIGTIIAITVP 201
            +V   VN GLL   D+A   + K FL  V+ LW  +++GS  +F T  YIG + A T+P
Sbjct: 143 VAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSCCNFLTVLYIGFVGAHTMP 202

Query: 202 ALYNKYDKHVDRYFGMISKQFRKH 226
            LY +Y+  VD +   +  +F  H
Sbjct: 203 VLYERYEDEVDGFMDSMIMKFHSH 224

[Close]

BLAST of Sed0017859 vs. ExPASy Swiss-Prot
Match: Q9LT71 (Reticulon-like protein B11 OS=Arabidopsis thaliana OX=3702 GN=RTNLB11 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.4e-26
Identity = 69/192 (35.94%), Postives = 109/192 (56.77%), Query Frame = 0


Query: 46  SYDRQVSLHHSMGAGKVADILLWKQHHVSFGIAVGATVFWILTEHSGLPLLTTCSDVLLI 105
           S   +VS+H S+GAG VAD+LLW+    +  + + +T FW L E +G  LL+  S+VLL+
Sbjct: 6   SSSSRVSVHQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLL 65

Query: 106 LVVLCFLGANFAPFQDKQLQALPQLVLSEEFVNSVAASVRARVNTGLLMAHDIALGNDFK 165
           LV + FL A  A   ++ L  +P + + EEF N  A  +R  +N  L +A DI +  +  
Sbjct: 66  LVAIFFLWAKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPI 125

Query: 166 LFLRVVVYLWTLSVIGSYISFFTFAYIGTIIAITVPALYNKYDKHVDRYFGMISKQF--- 225
             L+V + LW +S +G+ I+  T  YIG +++++ P +Y KY  H+D      SK     
Sbjct: 126 RLLQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHIDEKVNSTSKFVRNI 185

Query: 226 -RKHPGSLSKDK 234
            RK P  ++K+K
Sbjct: 186 SRKFPLPINKEK 197

[Close]

BLAST of Sed0017859 vs. ExPASy Swiss-Prot
Match: Q9SUT9 (Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.1e-25
Identity = 62/168 (36.90%), Postives = 94/168 (55.95%), Query Frame = 0


Query: 47  YDRQVSLHHSMGAGKVADILLWKQHHVSFGIAVGATVFWILTEHSGLPLLTTCSDVLLIL 106
           + R+  +H  +G GK ADI +WK   +S G+  GATV W+L E     LLT    V+++ 
Sbjct: 70  FGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVA 129

Query: 107 VVLCFLGANFAPFQDKQLQALPQLVLSEEFVNSVAASVRARVNTGLLMAHDIALGNDFKL 166
           + + FL +N   F  K    +P++ + EE +  +A+ +R  +N G+    +IA G D K 
Sbjct: 130 LAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKK 189

Query: 167 FLRVVVYLWTLSVIGSYISFFTFAYIGTIIAITVPALYNKYDKHVDRY 215
           FL  +  LW LS++G   SF T AYI  ++  TVP  Y+KY+  VD Y
Sbjct: 190 FLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSY 237

[Close]

BLAST of Sed0017859 vs. ExPASy Swiss-Prot
Match: Q9SH59 (Reticulon-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=RTNLB3 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.0e-24
Identity = 68/203 (33.50%), Postives = 105/203 (51.72%), Query Frame = 0


Query: 22  ERSNFGSAMVDNSRSGDGRDVAGTSYDRQVSLHHSMGAGKVADILLWKQHHVSFGIAVGA 81
           + S+  S   D+  S   +      + R+  LH   G GK ADI LW+   VS G+   A
Sbjct: 24  DSSSSSSDSDDDKNSASLKTKIYRLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAA 83

Query: 82  TVFWILTEHSGLPLLTTCSDVLLILVVLCFLGANFAPFQDKQLQALPQLVLSEEFVNSVA 141
           TV WIL E     LLT    + ++ + + FL ++ + F  K    +P++ + E+ V  +A
Sbjct: 84  TVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLA 143

Query: 142 ASVRARVNTGLLMAHDIALGNDFKLFLRVVVYLWTLSVIGSYISFFTFAYIGTIIAITVP 201
           + +R  +N G  +  DIA G D K FL V+  LW LS +GS  +F T  YI T++  T+P
Sbjct: 144 SGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIP 203

Query: 202 ALYNKYDKHVDRYFGMISKQFRK 225
            LY KY+  VD +     ++ +K
Sbjct: 204 VLYEKYEDKVDDFGEKAMREIKK 226

[Close]

BLAST of Sed0017859 vs. ExPASy TrEMBL
Match: A0A6J1K105 (Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489673 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 4.1e-77
Identity = 159/223 (71.30%), Postives = 177/223 (79.37%), Query Frame = 0


Query: 30  MVDNSRS-----GDGRDVAGTSYDRQVSLHHSMGAGKVADILLWKQHHVSFGIAVGATVF 89
           MVDN  S     GDG+D+A TS DR  SLH SMG GK ADILLWKQ HVSFGI V ATVF
Sbjct: 1   MVDNCDSAGNVDGDGKDIACTSCDRPASLHQSMGGGKAADILLWKQRHVSFGIVVVATVF 60

Query: 90  WILTEHSGLPLLTTCSDVLLILVVLCFLGANFAPFQDKQLQALPQLVLSEEFVNSVAASV 149
           W+L EHSGLPLLTTCSDVLL+LVVL FL ANFA F+ KQLQ LPQLVLSEEFV++VAAS 
Sbjct: 61  WLLIEHSGLPLLTTCSDVLLVLVVLLFLRANFAAFRKKQLQTLPQLVLSEEFVDNVAASF 120

Query: 150 RARVNTGLLMAHDIALGNDFKLFLRVVVYLWTLSVIGSYISFFTFAYIGTIIAITVPALY 209
           RA++N  LL+AHDI LGNDFKLF R+V+ LW LSV+GSY+SFFTFAYIGTII+ITVPALY
Sbjct: 121 RAKINNALLVAHDITLGNDFKLFFRMVICLWLLSVLGSYLSFFTFAYIGTIISITVPALY 180

Query: 210 NKYDKHVDRYFGMISKQFRKH------------PGSLSKDKDE 236
           +KYDKHVDR  GMI +QFRKH            PGSLSKDK +
Sbjct: 181 SKYDKHVDRCCGMIRQQFRKHYRVMDERVFSRLPGSLSKDKHQ 223

[Close]

BLAST of Sed0017859 vs. ExPASy TrEMBL
Match: A0A6J1BZV9 (Reticulon-like protein OS=Momordica charantia OX=3673 GN=LOC111006755 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 7.1e-77
Identity = 156/223 (69.96%), Postives = 177/223 (79.37%), Query Frame = 0


Query: 30  MVDNSRS-----GDGRDVAGTSYDRQVSLHHSMGAGKVADILLWKQHHVSFGIAVGATVF 89
           MVDN  S     GDG+++A TS  RQVSLH S+G GKVA+I+LWKQ HVSFG+ V ATV 
Sbjct: 1   MVDNYDSAGNVEGDGKEIASTSCSRQVSLHQSIGGGKVAEIILWKQWHVSFGVLVVATVA 60

Query: 90  WILTEHSGLPLLTTCSDVLLILVVLCFLGANFAPFQDKQLQALPQLVLSEEFVNSVAASV 149
           W+L EHSGLPLLT CSDVLLILVVL FL ANFA FQ+KQLQ LPQL LSEEFVN  AAS+
Sbjct: 61  WLLIEHSGLPLLTACSDVLLILVVLLFLRANFAAFQNKQLQMLPQLALSEEFVNDAAASI 120

Query: 150 RARVNTGLLMAHDIALGNDFKLFLRVVVYLWTLSVIGSYISFFTFAYIGTIIAITVPALY 209
           RA++N  LLMAHDI LGNDF+LF RVV+ LW LSVIGSY+SFFTFAYIG II+IT+PALY
Sbjct: 121 RAKINNALLMAHDITLGNDFRLFFRVVICLWLLSVIGSYLSFFTFAYIGIIISITIPALY 180

Query: 210 NKYDKHVDRYFGMISKQFRKH------------PGSLSKDKDE 236
           NKYDKHVDRY GMIS++FRKH            PG LSK+KD+
Sbjct: 181 NKYDKHVDRYCGMISQKFRKHYRVMDESVLSKLPGELSKEKDQ 223

[Close]

BLAST of Sed0017859 vs. ExPASy TrEMBL
Match: A0A5A7U9N4 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001790 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.6e-76
Identity = 152/210 (72.38%), Postives = 174/210 (82.86%), Query Frame = 0


Query: 38  DGRDVAGTSYDRQVSLHHSMGAGKVADILLWKQHHVSFGIAVGATVFWILTEHSGLPLLT 97
           DG+D+  TS DRQ  LH SMG GK ADILLWKQ HVSFGI V +TVFW+L EHSGLPLLT
Sbjct: 15  DGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLT 74

Query: 98  TCSDVLLILVVLCFLGANFAPFQDKQLQALPQLVLSEEFVNSVAASVRARVNTGLLMAHD 157
           TCSDVLLILVVL FL AN+A F++KQLQ LPQLVLSEEFVN+VAAS+RA++N  LLMAHD
Sbjct: 75  TCSDVLLILVVLLFLRANYAAFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHD 134

Query: 158 IALGNDFKLFLRVVVYLWTLSVIGSYISFFTFAYIGTIIAITVPALYNKYDKHVDRYFGM 217
           I LGNDFKLF R+V+ LW LSV+GSY+SFFTFAYIGTII+IT+PALY+KYDKHVDRY GM
Sbjct: 135 ITLGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYIGTIISITIPALYSKYDKHVDRYCGM 194

Query: 218 ISKQFRKH------------PGSLSKDKDE 236
           I +QFRKH            PG+LSKDK++
Sbjct: 195 IRQQFRKHYRVMDESVFSRLPGNLSKDKNQ 224

[Close]

BLAST of Sed0017859 vs. ExPASy TrEMBL
Match: A0A1S3C5B5 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103496616 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.6e-76
Identity = 152/210 (72.38%), Postives = 174/210 (82.86%), Query Frame = 0


Query: 38  DGRDVAGTSYDRQVSLHHSMGAGKVADILLWKQHHVSFGIAVGATVFWILTEHSGLPLLT 97
           DG+D+  TS DRQ  LH SMG GK ADILLWKQ HVSFGI V +TVFW+L EHSGLPLLT
Sbjct: 15  DGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLT 74

Query: 98  TCSDVLLILVVLCFLGANFAPFQDKQLQALPQLVLSEEFVNSVAASVRARVNTGLLMAHD 157
           TCSDVLLILVVL FL AN+A F++KQLQ LPQLVLSEEFVN+VAAS+RA++N  LLMAHD
Sbjct: 75  TCSDVLLILVVLLFLRANYAAFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHD 134

Query: 158 IALGNDFKLFLRVVVYLWTLSVIGSYISFFTFAYIGTIIAITVPALYNKYDKHVDRYFGM 217
           I LGNDFKLF R+V+ LW LSV+GSY+SFFTFAYIGTII+IT+PALY+KYDKHVDRY GM
Sbjct: 135 ITLGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYIGTIISITIPALYSKYDKHVDRYCGM 194

Query: 218 ISKQFRKH------------PGSLSKDKDE 236
           I +QFRKH            PG+LSKDK++
Sbjct: 195 IRQQFRKHYRVMDESVFSRLPGNLSKDKNQ 224

[Close]

BLAST of Sed0017859 vs. ExPASy TrEMBL
Match: A0A0A0KBS2 (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G014530 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.7e-76
Identity = 151/214 (70.56%), Postives = 173/214 (80.84%), Query Frame = 0


Query: 34  SRSGDGRDVAGTSYDRQVSLHHSMGAGKVADILLWKQHHVSFGIAVGATVFWILTEHSGL 93
           S   DG+D+  TS DRQ  LH SMG GK ADILLWKQ HVS G+ V +TVFW+L EHSGL
Sbjct: 11  SAEADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTVFWLLIEHSGL 70

Query: 94  PLLTTCSDVLLILVVLCFLGANFAPFQDKQLQALPQLVLSEEFVNSVAASVRARVNTGLL 153
           PLLTTCSDVLLILVVL FL ANFA F++KQLQ LPQLVLSEEFVN+VAAS+RA++N  LL
Sbjct: 71  PLLTTCSDVLLILVVLLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLL 130

Query: 154 MAHDIALGNDFKLFLRVVVYLWTLSVIGSYISFFTFAYIGTIIAITVPALYNKYDKHVDR 213
           MAHDI +GNDFKLF R+V+ LW LSV+GSY+SFFTFAY+GTII+IT+PALY+KYDKHVDR
Sbjct: 131 MAHDITVGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPALYSKYDKHVDR 190

Query: 214 YFGMISKQFRKH------------PGSLSKDKDE 236
           Y GMI +QFRKH            PG LSKDKD+
Sbjct: 191 YCGMIRQQFRKHYRVMDESVFSRLPGGLSKDKDQ 224

[Close]

BLAST of Sed0017859 vs. TAIR 10
Match: AT3G10915.2 (Reticulon family protein )

HSP 1 Score: 201.4 bits (511), Expect = 7.8e-52
Identity = 105/214 (49.07%), Postives = 147/214 (68.69%), Query Frame = 0


Query: 38  DGRDVAGTSYD-----RQVSLHHSMGAGKVADILLWKQHHVSFGIAVGATVFWILTEHSG 97
           DGR+  G+S D     RQ+++H  MG GK AD+LLW++ H+S G+ + +TV W++ E SG
Sbjct: 12  DGRNEGGSSSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSG 71

Query: 98  LPLLTTCSDVLLILVVLCFLGANFAPFQDKQLQALPQLVLSEEFVNSVAASVRARVNTGL 157
           LP L+  SDVLLI++++ F+ A  + F+++QL +LP+LVLSEE VNS AAS R ++N  L
Sbjct: 72  LPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLL 131

Query: 158 LMAHDIALGNDFKLFLRVVVYLWTLSVIGSYISFFTFAYIGTIIAITVPALYNKYDKHVD 217
           +MAHD+ +GNDF+LF +VV+ LW LS IGSYIS  T  YIGTI+++T+PALY+KY   VD
Sbjct: 132 VMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVD 191

Query: 218 RYFGMISKQFRKH------------PGSLSKDKD 235
           +  G I ++   H              SLSKDKD
Sbjct: 192 KCCGTIHRRLSHHYKIVDENVISRLSWSLSKDKD 225

[Close]

BLAST of Sed0017859 vs. TAIR 10
Match: AT3G10915.4 (Reticulon family protein )

HSP 1 Score: 196.8 bits (499), Expect = 1.9e-50
Identity = 105/215 (48.84%), Postives = 147/215 (68.37%), Query Frame = 0


Query: 38  DGRDVAGTSYD-----RQVSLHHSMGAGKVADILLWKQHHVSFGIAVGATVFWILTEHSG 97
           DGR+  G+S D     RQ+++H  MG GK AD+LLW++ H+S G+ + +TV W++ E SG
Sbjct: 12  DGRNEGGSSSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSG 71

Query: 98  LPLLTTCSDVLLILVVLCFLGANFAPFQDKQLQALPQLVLSEEFVNSVAASVRARVNTGL 157
           LP L+  SDVLLI++++ F+ A  + F+++QL +LP+LVLSEE VNS AAS R ++N  L
Sbjct: 72  LPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLL 131

Query: 158 LMAHDIALGNDFKLFLR-VVVYLWTLSVIGSYISFFTFAYIGTIIAITVPALYNKYDKHV 217
           +MAHD+ +GNDF+LF + VV+ LW LS IGSYIS  T  YIGTI+++T+PALY+KY   V
Sbjct: 132 VMAHDVTVGNDFRLFFKQVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKV 191

Query: 218 DRYFGMISKQFRKH------------PGSLSKDKD 235
           D+  G I ++   H              SLSKDKD
Sbjct: 192 DKCCGTIHRRLSHHYKIVDENVISRLSWSLSKDKD 226

[Close]

BLAST of Sed0017859 vs. TAIR 10
Match: AT3G10915.5 (Reticulon family protein )

HSP 1 Score: 184.1 bits (466), Expect = 1.3e-46
Identity = 105/237 (44.30%), Postives = 147/237 (62.03%), Query Frame = 0


Query: 38  DGRDVAGTSYD-----RQVSLHHSMGAGK----------------------VADILLWKQ 97
           DGR+  G+S D     RQ+++H  MG GK                       AD+LLW++
Sbjct: 12  DGRNEGGSSSDYRLLGRQITVHQFMGGGKGEFFFPEFHFGYSRKWKTWQFIAADLLLWRR 71

Query: 98  HHVSFGIAVGATVFWILTEHSGLPLLTTCSDVLLILVVLCFLGANFAPFQDKQLQALPQL 157
            H+S G+ + +TV W++ E SGLP L+  SDVLLI++++ F+ A  + F+++QL +LP+L
Sbjct: 72  RHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPEL 131

Query: 158 VLSEEFVNSVAASVRARVNTGLLMAHDIALGNDFKLFLR-VVVYLWTLSVIGSYISFFTF 217
           VLSEE VNS AAS R ++N  L+MAHD+ +GNDF+LF + VV+ LW LS IGSYIS  T 
Sbjct: 132 VLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIGSYISLCTL 191

Query: 218 AYIGTIIAITVPALYNKYDKHVDRYFGMISKQFRKH------------PGSLSKDKD 235
            YIGTI+++T+PALY+KY   VD+  G I ++   H              SLSKDKD
Sbjct: 192 LYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSLSKDKD 248

[Close]

BLAST of Sed0017859 vs. TAIR 10
Match: AT3G10915.3 (Reticulon family protein )

HSP 1 Score: 179.9 bits (455), Expect = 2.4e-45
Identity = 92/184 (50.00%), Postives = 129/184 (70.11%), Query Frame = 0


Query: 63  ADILLWKQHHVSFGIAVGATVFWILTEHSGLPLLTTCSDVLLILVVLCFLGANFAPFQDK 122
           AD+LLW++ H+S G+ + +TV W++ E SGLP L+  SDVLLI++++ F+ A  + F+++
Sbjct: 9   ADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNR 68

Query: 123 QLQALPQLVLSEEFVNSVAASVRARVNTGLLMAHDIALGNDFKLFLRVVVYLWTLSVIGS 182
           QL +LP+LVLSEE VNS AAS R ++N  L+MAHD+ +GNDF+LF +VV+ LW LS IGS
Sbjct: 69  QLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGS 128

Query: 183 YISFFTFAYIGTIIAITVPALYNKYDKHVDRYFGMISKQFRKH------------PGSLS 235
           YIS  T  YIGTI+++T+PALY+KY   VD+  G I ++   H              SLS
Sbjct: 129 YISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSLS 188

[Close]

BLAST of Sed0017859 vs. TAIR 10
Match: AT3G10915.6 (Reticulon family protein )

HSP 1 Score: 179.9 bits (455), Expect = 2.4e-45
Identity = 92/184 (50.00%), Postives = 129/184 (70.11%), Query Frame = 0


Query: 63  ADILLWKQHHVSFGIAVGATVFWILTEHSGLPLLTTCSDVLLILVVLCFLGANFAPFQDK 122
           AD+LLW++ H+S G+ + +TV W++ E SGLP L+  SDVLLI++++ F+ A  + F+++
Sbjct: 10  ADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNR 69

Query: 123 QLQALPQLVLSEEFVNSVAASVRARVNTGLLMAHDIALGNDFKLFLRVVVYLWTLSVIGS 182
           QL +LP+LVLSEE VNS AAS R ++N  L+MAHD+ +GNDF+LF +VV+ LW LS IGS
Sbjct: 70  QLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGS 129

Query: 183 YISFFTFAYIGTIIAITVPALYNKYDKHVDRYFGMISKQFRKH------------PGSLS 235
           YIS  T  YIGTI+++T+PALY+KY   VD+  G I ++   H              SLS
Sbjct: 130 YISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSLS 189

The following BLAST results are available for this feature:

BLAST of Sed0017859 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022993764.1	8.6e-77	71.30	reticulon-like protein B16 [Cucurbita maxima]	[more]
XP_022134537.1	1.5e-76	69.96	reticulon-like protein B16 [Momordica charantia]	[more]
XP_008456773.1	3.3e-76	72.38	PREDICTED: reticulon-like protein B16 [Cucumis melo] >KAA0052008.1 reticulon-lik...	[more]
XP_004138395.1	5.5e-76	70.56	reticulon-like protein B16 isoform X1 [Cucumis sativus] >KGN45832.1 hypothetical...	[more]
XP_022923115.1	7.2e-76	69.96	reticulon-like protein B16 [Cucurbita moschata]	[more]

BLAST of Sed0017859 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYH6	1.1e-50	49.07	Reticulon-like protein B16 OS=Arabidopsis thaliana OX=3702 GN=RTNLB16 PE=2 SV=1	[more]
Q9SS37	1.4e-26	32.84	Reticulon-like protein B8 OS=Arabidopsis thaliana OX=3702 GN=RTNLB8 PE=2 SV=1	[more]
Q9LT71	1.4e-26	35.94	Reticulon-like protein B11 OS=Arabidopsis thaliana OX=3702 GN=RTNLB11 PE=2 SV=1	[more]
Q9SUT9	2.1e-25	36.90	Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1	[more]
Q9SH59	1.0e-24	33.50	Reticulon-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=RTNLB3 PE=2 SV=1	[more]

BLAST of Sed0017859 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K105	4.1e-77	71.30	Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489673 PE=4 SV=1	[more]
A0A6J1BZV9	7.1e-77	69.96	Reticulon-like protein OS=Momordica charantia OX=3673 GN=LOC111006755 PE=4 SV=1	[more]
A0A5A7U9N4	1.6e-76	72.38	Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4...	[more]
A0A1S3C5B5	1.6e-76	72.38	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103496616 PE=4 SV=1	[more]
A0A0A0KBS2	2.7e-76	70.56	Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G014530 PE=4 SV=1	[more]

BLAST of Sed0017859 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10915.2	7.8e-52	49.07	Reticulon family protein	[more]
AT3G10915.4	1.9e-50	48.84	Reticulon family protein	[more]
AT3G10915.5	1.3e-46	44.30	Reticulon family protein	[more]
AT3G10915.3	2.4e-45	50.00	Reticulon family protein	[more]
AT3G10915.6	2.4e-45	50.00	Reticulon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 33..188 e-value: 7.5E-43 score: 146.2
IPR003388	Reticulon	PROSITE	PS50845	RETICULON	coord: 33..195 score: 27.658445
IPR045064	Reticulon-like protein, plant	PANTHER	PTHR10994	RETICULON	coord: 10..196
None	No IPR available	PANTHER	PTHR10994:SF67	RETICULON-LIKE PROTEIN B16	coord: 10..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017859.1	Sed0017859.1	mRNA
Sed0017859.2	Sed0017859.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009617	response to bacterium
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane