Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTTTACAAAGATGGCAAGTGGCTGGAAGAGAGTGGCTTTGTTATCTTTGCTTTGTTTTCATGTTCTTCAATCCAGTGTGTTTGCTAAGGAAGTGGCTGATGAGAAGGAAGAGAAATTCTTGTTCTTTGGTAAGAGTGGTGGACTAGGAGGTGGATTTGGTGGTGGCTTTGGAGGAGGAGGCGGTGGCGGTGGTGGATTTGGTATTGGTGGTGGTGCTGGCGCTGGCGGTGGTTTTGGTGGTGGTATTGGTAAAGGTGGAGGTCTTGGTAGTGGTGGTGGTGCTGGAGGAGGATTTGGTAAAGGAGGTGGACTTGGCAGCGGCATTGGAAAAGGTGGAGGAATCGGTGGCGGCGTTGGAGGAGGATTCGGTAAAGGAGGTGGACTTGGCGGCGGCATTGGGAAAGGTGGAGGACTAGGTGGTGGTGCCGGAGGAGGATTTGGTAAAGGTGGCGGACTTGGCAACGGCATTGGAAAAGGTGGAGGACTAGGTGGTGGCGCTGGAGGAGGATTTGGTAAAGGTGGCGGACTTGGCGGCGGCATTGGAAAAGGTGGAGGACTAGGTGGTGGCGCTGGAGGAGGATTTGGTAAGGGTGGCGGACTTGGCGGTGGCATTGGGAAAGGTGGAGGACTCGGTGGTGGCACCGGAGGAGGATTCGGTAAAGGAGGTGGACTTGGTGGTGGCATTGGAAAAGGTGGTGGACTTGGTGGTGGCGCTGGAGGAGGGATTGGTAAGGGAGGTGGATTTGGTGGTGGTGCGGGAGGTAGCGTCGGAGGAGGGATTGGTAAAGGCGGTGGACTTGGTGGTGGCATTGGAAAAGGTGGAGGATTTGGTGGTGGTGCAGGCGGTGGAACTGGAGGAGGGATTGGTAAAGGAGGTGGACTTGGTGGTGGTGCTGGAGGAGGCTTCGGTAAAGGCGGTGGATTTGGTGGTGGCATTGGAAAGGGTGGTGGACTTGGTGGTGGCATTGGAAAGGGTGGTGGACTTGGTGGTGGAATAGGAGGTGGTGCTGGTGGAGGCGGCGGAAGTGGTGGAGGTTTTGGTGGTGGCATTGGAAAGGGTGGAGGACTTGGTGGTGGAGGTGGCAGCGGCGGTGGCGGCGGTGGAGGATTTGGTGGCGGAGTAGGAGGTGGTGCTGGTGGCGGCGGAGGTTTTGGTGGTGGATTTGGAAAGGGTGGAGGTTTGGGAGGTGGCTCAGGTGGTGGATTTGGAGGCGGTTTTGGTGGAGGTGGCGGCAGTGGAGGCGGCTTTGGTGGTGGAGGTGGTTTTGGGGGTGGCGGCGGTAGTGGACACCACTAAACTTTACTTAGTAACAGATCTCTCATTCTATCAAATATATGCATTATGTATTCTTCTTACATTACTTTACTTAGATATTTGTCTACCTTTTATTCTTAACATGAATATCGTAGCGTTATTCAAGTTATTTTCTTATCTTCATCTTCAAATTATATCAATCCAAAACAATAAATGAAAATTTATAATATGTTTGAAATTTGTGCAATA
mRNA sequence
CCTTTACAAAGATGGCAAGTGGCTGGAAGAGAGTGGCTTTGTTATCTTTGCTTTGTTTTCATGTTCTTCAATCCAGTGTGTTTGCTAAGGAAGTGGCTGATGAGAAGGAAGAGAAATTCTTGTTCTTTGGTAAGAGTGGTGGACTAGGAGGTGGATTTGGTGGTGGCTTTGGAGGAGGAGGCGGTGGCGGTGGTGGATTTGGTATTGGTGGTGGTGCTGGCGCTGGCGGTGGTTTTGGTGGTGGTATTGGTAAAGGTGGAGGTCTTGGTAGTGGTGGTGGTGCTGGAGGAGGATTTGGTAAAGGAGGTGGACTTGGCAGCGGCATTGGAAAAGGTGGAGGAATCGGTGGCGGCGTTGGAGGAGGATTCGGTAAAGGAGGTGGACTTGGCGGCGGCATTGGGAAAGGTGGAGGACTAGGTGGTGGTGCCGGAGGAGGATTTGGTAAAGGTGGCGGACTTGGCAACGGCATTGGAAAAGGTGGAGGACTAGGTGGTGGCGCTGGAGGAGGATTTGGTAAAGGTGGCGGACTTGGCGGCGGCATTGGAAAAGGTGGAGGACTAGGTGGTGGCGCTGGAGGAGGATTTGGTAAGGGTGGCGGACTTGGCGGTGGCATTGGGAAAGGTGGAGGACTCGGTGGTGGCACCGGAGGAGGATTCGGTAAAGGAGGTGGACTTGGTGGTGGCATTGGAAAAGGTGGTGGACTTGGTGGTGGCGCTGGAGGAGGGATTGGTAAGGGAGGTGGATTTGGTGGTGGTGCGGGAGGTAGCGTCGGAGGAGGGATTGGTAAAGGCGGTGGACTTGGTGGTGGCATTGGAAAAGGTGGAGGATTTGGTGGTGGTGCAGGCGGTGGAACTGGAGGAGGGATTGGTAAAGGAGGTGGACTTGGTGGTGGTGCTGGAGGAGGCTTCGGTAAAGGCGGTGGATTTGGTGGTGGCATTGGAAAGGGTGGTGGACTTGGTGGTGGCATTGGAAAGGGTGGTGGACTTGGTGGTGGAATAGGAGGTGGTGCTGGTGGAGGCGGCGGAAGTGGTGGAGGTTTTGGTGGTGGCATTGGAAAGGGTGGAGGACTTGGTGGTGGAGGTGGCAGCGGCGGTGGCGGCGGTGGAGGATTTGGTGGCGGAGTAGGAGGTGGTGCTGGTGGCGGCGGAGGTTTTGGTGGTGGATTTGGAAAGGGTGGAGGTTTGGGAGGTGGCTCAGGTGGTGGATTTGGAGGCGGTTTTGGTGGAGGTGGCGGCAGTGGAGGCGGCTTTGGTGGTGGAGGTGGTTTTGGGGGTGGCGGCGGTAGTGGACACCACTAAACTTTACTTAGTAACAGATCTCTCATTCTATCAAATATATGCATTATGTATTCTTCTTACATTACTTTACTTAGATATTTGTCTACCTTTTATTCTTAACATGAATATCGTAGCGTTATTCAAGTTATTTTCTTATCTTCATCTTCAAATTATATCAATCCAAAACAATAAATGAAAATTTATAATATGTTTGAAATTTGTGCAATA
Coding sequence (CDS)
ATGGCAAGTGGCTGGAAGAGAGTGGCTTTGTTATCTTTGCTTTGTTTTCATGTTCTTCAATCCAGTGTGTTTGCTAAGGAAGTGGCTGATGAGAAGGAAGAGAAATTCTTGTTCTTTGGTAAGAGTGGTGGACTAGGAGGTGGATTTGGTGGTGGCTTTGGAGGAGGAGGCGGTGGCGGTGGTGGATTTGGTATTGGTGGTGGTGCTGGCGCTGGCGGTGGTTTTGGTGGTGGTATTGGTAAAGGTGGAGGTCTTGGTAGTGGTGGTGGTGCTGGAGGAGGATTTGGTAAAGGAGGTGGACTTGGCAGCGGCATTGGAAAAGGTGGAGGAATCGGTGGCGGCGTTGGAGGAGGATTCGGTAAAGGAGGTGGACTTGGCGGCGGCATTGGGAAAGGTGGAGGACTAGGTGGTGGTGCCGGAGGAGGATTTGGTAAAGGTGGCGGACTTGGCAACGGCATTGGAAAAGGTGGAGGACTAGGTGGTGGCGCTGGAGGAGGATTTGGTAAAGGTGGCGGACTTGGCGGCGGCATTGGAAAAGGTGGAGGACTAGGTGGTGGCGCTGGAGGAGGATTTGGTAAGGGTGGCGGACTTGGCGGTGGCATTGGGAAAGGTGGAGGACTCGGTGGTGGCACCGGAGGAGGATTCGGTAAAGGAGGTGGACTTGGTGGTGGCATTGGAAAAGGTGGTGGACTTGGTGGTGGCGCTGGAGGAGGGATTGGTAAGGGAGGTGGATTTGGTGGTGGTGCGGGAGGTAGCGTCGGAGGAGGGATTGGTAAAGGCGGTGGACTTGGTGGTGGCATTGGAAAAGGTGGAGGATTTGGTGGTGGTGCAGGCGGTGGAACTGGAGGAGGGATTGGTAAAGGAGGTGGACTTGGTGGTGGTGCTGGAGGAGGCTTCGGTAAAGGCGGTGGATTTGGTGGTGGCATTGGAAAGGGTGGTGGACTTGGTGGTGGCATTGGAAAGGGTGGTGGACTTGGTGGTGGAATAGGAGGTGGTGCTGGTGGAGGCGGCGGAAGTGGTGGAGGTTTTGGTGGTGGCATTGGAAAGGGTGGAGGACTTGGTGGTGGAGGTGGCAGCGGCGGTGGCGGCGGTGGAGGATTTGGTGGCGGAGTAGGAGGTGGTGCTGGTGGCGGCGGAGGTTTTGGTGGTGGATTTGGAAAGGGTGGAGGTTTGGGAGGTGGCTCAGGTGGTGGATTTGGAGGCGGTTTTGGTGGAGGTGGCGGCAGTGGAGGCGGCTTTGGTGGTGGAGGTGGTTTTGGGGGTGGCGGCGGTAGTGGACACCACTAA
Protein sequence
MASGWKRVALLSLLCFHVLQSSVFAKEVADEKEEKFLFFGKSGGLGGGFGGGFGGGGGGGGGFGIGGGAGAGGGFGGGIGKGGGLGSGGGAGGGFGKGGGLGSGIGKGGGIGGGVGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGNGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGTGGGFGKGGGLGGGIGKGGGLGGGAGGGIGKGGGFGGGAGGSVGGGIGKGGGLGGGIGKGGGFGGGAGGGTGGGIGKGGGLGGGAGGGFGKGGGFGGGIGKGGGLGGGIGKGGGLGGGIGGGAGGGGGSGGGFGGGIGKGGGLGGGGGSGGGGGGGFGGGVGGGAGGGGGFGGGFGKGGGLGGGSGGGFGGGFGGGGGSGGGFGGGGGFGGGGGSGHH
Homology
BLAST of Sed0017820 vs. NCBI nr
Match:
XP_031737441.1 (LOW QUALITY PROTEIN: glycine-rich cell wall structural protein [Cucumis sativus])
HSP 1 Score: 227.3 bits (578), Expect = 2.6e-55
Identity = 351/443 (79.23%), Postives = 361/443 (81.49%), Query Frame = 0
Query: 1 MASGWKRVALLSLLCFHVLQSSVFAKEVADEKEEKFLFFGKSGGLGGGFGGGFGGGGGGG 60
MASGWKRVALLSLLCF V+ +V AKE D KEEKFLFFGKSGGLG GFGGG G GGGGG
Sbjct: 1 MASGWKRVALLSLLCFQVIVYNVVAKE--DGKEEKFLFFGKSGGLGSGFGGGSGFGGGGG 60
Query: 61 GGFGIGGGAGAGGGFGGGIGKGGGLGSGGGAGGGFGKGGGLGSGIGKGGGIGGGVGGGFG 120
GG G GGG G GGGFGGG+G GGG G GGG G G G GGG+G G G G G+GGG+G G G
Sbjct: 61 GGGGGGGGGGGGGGFGGGVGFGGGHGIGGGFGKGGGVGGGVGGGAGGGSGVGGGIGKGGG 120
Query: 121 KGGGLGGGIGKGGGLGGGAGGGFGKGGGLGNGIGKGGGLGGGAGGGFGKGGGLGGGIGKG 180
GGG GGG GKGGGLGGGAGGGFGKGGGLG GIGKGGGLGGGAGGGFGKGGGLGGGIGKG
Sbjct: 121 LGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKG 180
Query: 181 GGLGGGAGGGFGKGGGLGGGIGKGGGLGGGTGGGFGKGGGLGGGIGKGGGLGGGA----- 240
GGLGGGAGGGFGKGGGLGGGIGKGGGLGGG GGG+GKGGGLGGGIGKGGGLGGG
Sbjct: 181 GGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGYGKGGGLGGGIGKGGGLGGGVGGGFG 240
Query: 241 -GGGIGKGGGFGGGAGGSVGGGIGKGGGLGGGIGKGGGFGGGAGGGTGGGIGKGGGL--G 300
GGGIGKGGG GGG GG GGG GKGGGLGGGIGKGGG GGG GGG GGG GKGGG+ G
Sbjct: 241 KGGGIGKGGGLGGGVGGGAGGGFGKGGGLGGGIGKGGGLGGGVGGGAGGGFGKGGGIGKG 300
Query: 301 GGAGGGFGKGGGF----GGGIGKGGGLGGGIGKGGGLGGGIGGGAGGGGGSGGGFGGGIG 360
GG GGG GKGGG GGG GKGGGLGGGIGKGGGLGGG GGG G GGG GGG GGG G
Sbjct: 301 GGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGTGGGFGKGGGLGGGAGGGFG 360
Query: 361 KGGGLGGGGGSGGGGGGGFGGGV--GGGAGGGGGFGGGFGKGGGLGG--GSGGGFGGGFG 420
KGGGLGGG G GGG GGG GGG GGG GGGGG GGGFGKGGG+GG G GGGFGGG G
Sbjct: 361 KGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGGGAGGGFGKGGGVGGGFGKGGGFGGGVG 420
Query: 421 GGGGSGGGFGGGGGFGGGGGSGH 428
GG G GGG GGGGG GGGGG G+
Sbjct: 421 GGAGGGGGXGGGGGGGGGGGFGN 441
BLAST of Sed0017820 vs. NCBI nr
Match:
XP_023006068.1 (glycine-rich cell wall structural protein-like isoform X14 [Cucurbita maxima])
HSP 1 Score: 221.5 bits (563), Expect = 1.4e-53
Identity = 346/440 (78.64%), Postives = 357/440 (81.14%), Query Frame = 0
Query: 1 MASGWKRVALLSLLCFHVLQSSVFAKEVADEKEEKFLFFGKSGGLGGGFGGGFG-GGGGG 60
MA+G RVALLS LCF+VL SV AKEV + +EEKFLFFGKSGGLG GFGGG G GGG G
Sbjct: 1 MATGCNRVALLSFLCFYVLVCSVVAKEVGNGEEEKFLFFGKSGGLGVGFGGGSGFGGGFG 60
Query: 61 GGGFGIGGGAGAGGGFGGGIGKGGGLGSGGGAGGGFGKGGGLGSGIGKGGGIGGGVGGGF 120
GGG G GGG+G GGGFGG G G+G GGGAGGG G G G G+G GKGGG+GGG GGGF
Sbjct: 61 GGGGGGGGGSGGGGGFGG----GSGIGIGGGAGGGAGGGVGGGAGFGKGGGLGGGAGGGF 120
Query: 121 GKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGNGIGKGGGLGGGAGGGFGKGGGLGGGIGK 180
GKGGGLGGGIGKGGGLGGG GG G GGGLG GIGKGGGLGGGA GGGLGGGIGK
Sbjct: 121 GKGGGLGGGIGKGGGLGGGVGG--GAGGGLGGGIGKGGGLGGGA------GGGLGGGIGK 180
Query: 181 GGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGTGGGFGKGGGLGGGIGKGGGLGGGAGGGI 240
GGGL GGG+GKGGGLGGGIGKGGGLGGG GGGFGKGGG GGG GKGGGL GGGI
Sbjct: 181 GGGL----GGGYGKGGGLGGGIGKGGGLGGGAGGGFGKGGGAGGGYGKGGGL----GGGI 240
Query: 241 GKGGGFGGGAGGSVGGGIGKGGGLGGGIGKGGGFGGGA------GGGTGGGIGKGGGLGG 300
GKGGG GGG GG VGGGIGKGGGLGGGIGKGGG GGGA GGG GGGIGKGGGLGG
Sbjct: 241 GKGGGLGGGVGGGVGGGIGKGGGLGGGIGKGGGLGGGAGGGYGKGGGLGGGIGKGGGLGG 300
Query: 301 GAGGGFGKGGGFGGGIGKGGGLGGGIGKGGGLGGGIGGGAGGGGGSGGGFGGGIGKGGGL 360
GAGGGFGKGGG GGGIGKGGGLGGG+ GGG GGG+GGG GGG G GGG GGGIG GGGL
Sbjct: 301 GAGGGFGKGGGLGGGIGKGGGLGGGV--GGGAGGGLGGGVGGGFGKGGGLGGGIGSGGGL 360
Query: 361 ---GGGGGSGGGGGGGFGGGVGGGAGGGGGFGGGFGKGGGLGGGSGGGFGGGFGGGGGSG 420
GGGGG GGGGGGG GGG GGG G GGGFGGGFGKGGG GGGSGGGFGGGFGGGGG G
Sbjct: 361 GGGGGGGGGGGGGGGGGGGGFGGGFGKGGGFGGGFGKGGGFGGGSGGGFGGGFGGGGGVG 418
Query: 421 GGFGGGGGFGGGGGS--GHH 429
GGFGGG GFGGGGG GHH
Sbjct: 421 GGFGGGSGFGGGGGGGIGHH 418
BLAST of Sed0017820 vs. NCBI nr
Match:
KAA0050716.1 (hypothetical protein E6C27_scaffold560G00130 [Cucumis melo var. makuwa] >TYK01449.1 hypothetical protein E5676_scaffold772G00390 [Cucumis melo var. makuwa])
HSP 1 Score: 221.1 bits (562), Expect = 1.9e-53
Identity = 366/480 (76.25%), Postives = 370/480 (77.08%), Query Frame = 0
Query: 1 MASGWKRVALLSLLCFHVLQSSVFAKEVADEKEEKFLFFGKSGGLGGGFGG--GFGGGGG 60
MASGWKRVALLSLLCFHVL +V AKE D KEEKFLFFGKSGGLGGGFGG GFGGG G
Sbjct: 1 MASGWKRVALLSLLCFHVLVYNVVAKE--DGKEEKFLFFGKSGGLGGGFGGGSGFGGGFG 60
Query: 61 GGGGFGIGGGAGAGGGFGGGIGKGGGLGSGGGAGGGFGKGGGLGSGIGKGGGIGGGVGGG 120
GGGG G GGG G GGGFGGG G GGG G GGG G G G GGG+G G G GGG+GGG+G G
Sbjct: 61 GGGGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKG 120
Query: 121 FGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGNGIGKGGGLGG--GAGGGFGKGGGLGGG 180
G GGG GGG GKGGGLGGGAGGGFGKGGGLG GIGKGGGLGG GAGGGFGKGGGLGGG
Sbjct: 121 GGLGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGAGGGFGKGGGLGGG 180
Query: 181 IGKGGGLGG--GAGGGFGKGGGLGGGIGKGGGLGGGTGGGFGKGGGLGGGIGKGGGLGGG 240
IGKGGGLGG GAGGGFGKGGGLGGGIGKGGGLGGG GGG GKGGGLGGGIGKGGGLGGG
Sbjct: 181 IGKGGGLGGGAGAGGGFGKGGGLGGGIGKGGGLGGGAGGGIGKGGGLGGGIGKGGGLGGG 240
Query: 241 AGGG------IGKGGGFGGGAGGSVGGGIGKGGGLGGGIGKGGGFGGGAGGGTGGGIGKG 300
AGGG IGKGGG GGG GG GGG GKGGGLGGGIGKGGG GGG GGG GGG GKG
Sbjct: 241 AGGGIGKGGVIGKGGGLGGGVGGGAGGGFGKGGGLGGGIGKGGGLGGGVGGGAGGGFGKG 300
Query: 301 GGL--------------GGGAGGGFGKGGGFGGGIGKGGGL----GGGIGKGGGLGGGI- 360
GGL GGGAGGGFGKGGG GGGIGKGGGL GGG GKGGGLGGGI
Sbjct: 301 GGLGGGIGKGGGLGGGVGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIG 360
Query: 361 -----GGGAGGGGGSGGGFGGGIGKGGGLGGGGGSG-------GGG---GGGFGGGVGGG 420
GGGAGGG G GGG GGGIGKGGG GGG G G GGG GGGFGGGVGGG
Sbjct: 361 KGGGLGGGAGGGFGKGGGLGGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGG 420
Query: 421 AGGGGGFGGGFGKGGGLGGGSGGGFGGGFGG------GGGSGGGFGGGGGFGGGGGSGHH 429
AGGGGG GGG G GGG G G GGGFG GFG GGG GGGFGGGGGF GGGG GHH
Sbjct: 421 AGGGGGGGGGGGGGGGGGFGKGGGFGSGFGSGFGGGVGGGGGGGFGGGGGF-GGGGIGHH 477
BLAST of Sed0017820 vs. NCBI nr
Match:
KAE8651806.1 (hypothetical protein Csa_006078 [Cucumis sativus])
HSP 1 Score: 219.9 bits (559), Expect = 4.1e-53
Identity = 339/432 (78.47%), Postives = 349/432 (80.79%), Query Frame = 0
Query: 1 MASGWKRVALLSLLCFHVLQSSVFAKEVADEKEEKFLFFGKSGGLGGGFGGGFGGGGGGG 60
MASGWKRVALLSLLCF V+ +V AKE D KEEKFLFFGKSGGLG GFGGG G GGGGG
Sbjct: 1 MASGWKRVALLSLLCFQVIVYNVVAKE--DGKEEKFLFFGKSGGLGSGFGGGSGFGGGGG 60
Query: 61 GGFGIGGGAGAGGGFGGGIGKGGGLGSGGGAGGGFGKGGGLGSGIGKGGGIGGGVGGGFG 120
GG G GGG G GGGFGGG+G GGG G GGG G G G GGG+G G G G G+GGG+G G G
Sbjct: 61 GGGGGGGGGGGGGGFGGGVGFGGGHGIGGGFGKGGGVGGGVGGGAGGGSGVGGGIGKGGG 120
Query: 121 KGGGLGGGIGKGGGLGGGAGGGFGKGGGLGNGIGKGGGLGGGAGGGFGKGGGLGGGIGKG 180
GGG GGG GKGGGLGGGAGGGFGKGGGLG GIGKGGGLGGGAGGGFGKGGGLGGGIGKG
Sbjct: 121 LGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKG 180
Query: 181 GGLGGGAGGGFGKGGGLGGGIGKGGGLGGGTGGGFGKGGGLGGGIGKGGGLGGGA----- 240
GGLGGGAGGGFGKGGGLGGGIGKGGGLGGG GGG+GKGGGLGGGIGKGGGLGGG
Sbjct: 181 GGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGYGKGGGLGGGIGKGGGLGGGVGGGFG 240
Query: 241 -GGGIGKGGGFGGGAGGSVGGGIGKGGGLGGGIGKGGGFGGGAGGGTGGGIGKGGGLGGG 300
GGGIGKGGG GGG GG GGG GKGGGLGGGIGKGGG GGG GGG GGG GKGGG+
Sbjct: 241 KGGGIGKGGGLGGGVGGGAGGGFGKGGGLGGGIGKGGGLGGGVGGGAGGGFGKGGGI--- 300
Query: 301 AGGGFGKGGGFGGGIGKGGGLGGGIGKGGGLGGGIGGGAGGGGGSGGGFGGGIGKGGGLG 360
GKGGG GGGIGKGGGLGGG G G G GGG+GGG G GGG GGG GGG GKGGGLG
Sbjct: 301 -----GKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGTGGGFGKGGGLG 360
Query: 361 GGGGSGGGGGGGFGGGVGGGAGGGGGFGGGFGKGGGLGGGSGGGFGGGFGGGGGSGGGFG 420
GG G G G GGG GGG+G G G GGG GGGFGKGGGLGG GGG GGGFG GGG GGGFG
Sbjct: 361 GGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGG--GGGAGGGFGKGGGVGGGFG 420
Query: 421 GGGGFGGGGGSG 427
GGGFGGG G G
Sbjct: 421 KGGGFGGGVGGG 420
BLAST of Sed0017820 vs. NCBI nr
Match:
XP_038906570.1 (glycine-rich cell wall structural protein isoform X1 [Benincasa hispida] >XP_038906571.1 glycine-rich cell wall structural protein isoform X2 [Benincasa hispida])
HSP 1 Score: 218.0 bits (554), Expect = 1.6e-52
Identity = 337/442 (76.24%), Postives = 350/442 (79.19%), Query Frame = 0
Query: 1 MASGWKRVALLSLLCFHVL--QSSVFAKEVADEKEEKFLFFGKSGGLGGGFGGGFGGGGG 60
MASG+KRVALLSLLCFHV+ ++V AKE D KEEKFLFFGKSGGLGGGFGGG GGG G
Sbjct: 1 MASGFKRVALLSLLCFHVIVYSNNVVAKE--DGKEEKFLFFGKSGGLGGGFGGGGGGGFG 60
Query: 61 GGGGFGIGGGAGAGGGFGGGIGK--------GGGLGSGGGAGGGFGKGGGLGSGIGKGGG 120
GGGGFG GGGAG GGGFGGG G GGG+G GGGAGGGFGKGGG+G G GKGGG
Sbjct: 61 GGGGFGGGGGAGGGGGFGGGSGGGFGGGHGIGGGIGGGGGAGGGFGKGGGIGGGFGKGGG 120
Query: 121 IGGGVGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGNGIGKGGGLGGGAGGGFGKG 180
IGGGVGGG G GGGLGGGIGKGGGLGGGAGGGFGKGGG G G GKGGGL GGG GKG
Sbjct: 121 IGGGVGGGAGGGGGLGGGIGKGGGLGGGAGGGFGKGGGAGGGFGKGGGL----GGGIGKG 180
Query: 181 GGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGTGGGFGKGGGLGGGIGKGGG 240
GGLGGG+ GGGAGGGFGKGGGLGGG+ GGG GGGFGKGGGLGGGIGKGGG
Sbjct: 181 GGLGGGV------GGGAGGGFGKGGGLGGGV------GGGAGGGFGKGGGLGGGIGKGGG 240
Query: 241 LGGGAGGGIGKGGGFGGGAGGSVGGGIGKGGGLGGGIGKGGGFGGGAGGGTGGGIGKGGG 300
LGGGAGGG GKGGG +GGGIGKGGGLGGG+G G G G G GGG GGGIGKGGG
Sbjct: 241 LGGGAGGGFGKGGG--------LGGGIGKGGGLGGGVGGGAGGGFGKGGGLGGGIGKGGG 300
Query: 301 LGGGAGGGFGKGGGFGGGIGKGGGLGGGIGKGGGLGGGIGGGAGGGGGSGGGFGGGIGKG 360
LGGGAGGGFGKGGG GGG G G G GGGIGKGGGLGGG GGG G GGG+GGGF
Sbjct: 301 LGGGAGGGFGKGGGLGGGAGGGFGKGGGIGKGGGLGGGAGGGFGKGGGAGGGF------- 360
Query: 361 GGLGGGGGSGGGGGGGFGGGVGGGAGGGGGFGGGFGK--GGGLGGGSGGGFGGGFGGGGG 420
G GGG GGG GGG GGG G G GGGGGFGGGFGK GGG+GGGSGGGFGGGFGGGGG
Sbjct: 361 ---GKGGGFGGGAGGGAGGGFGKGGGGGGGFGGGFGKGFGGGIGGGSGGGFGGGFGGGGG 406
Query: 421 SGGGFGGGGGFGGGGGS--GHH 429
+GGGFGGGGGFGGGGG GHH
Sbjct: 421 AGGGFGGGGGFGGGGGGGIGHH 406
BLAST of Sed0017820 vs. ExPASy TrEMBL
Match:
A0A5D3BTN6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold772G00390 PE=4 SV=1)
HSP 1 Score: 221.1 bits (562), Expect = 9.0e-54
Identity = 366/480 (76.25%), Postives = 370/480 (77.08%), Query Frame = 0
Query: 1 MASGWKRVALLSLLCFHVLQSSVFAKEVADEKEEKFLFFGKSGGLGGGFGG--GFGGGGG 60
MASGWKRVALLSLLCFHVL +V AKE D KEEKFLFFGKSGGLGGGFGG GFGGG G
Sbjct: 1 MASGWKRVALLSLLCFHVLVYNVVAKE--DGKEEKFLFFGKSGGLGGGFGGGSGFGGGFG 60
Query: 61 GGGGFGIGGGAGAGGGFGGGIGKGGGLGSGGGAGGGFGKGGGLGSGIGKGGGIGGGVGGG 120
GGGG G GGG G GGGFGGG G GGG G GGG G G G GGG+G G G GGG+GGG+G G
Sbjct: 61 GGGGGGGGGGGGGGGGFGGGGGYGGGHGIGGGFGKGGGVGGGIGGGAGGGGGVGGGIGKG 120
Query: 121 FGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGNGIGKGGGLGG--GAGGGFGKGGGLGGG 180
G GGG GGG GKGGGLGGGAGGGFGKGGGLG GIGKGGGLGG GAGGGFGKGGGLGGG
Sbjct: 121 GGLGGGAGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGAGGGFGKGGGLGGG 180
Query: 181 IGKGGGLGG--GAGGGFGKGGGLGGGIGKGGGLGGGTGGGFGKGGGLGGGIGKGGGLGGG 240
IGKGGGLGG GAGGGFGKGGGLGGGIGKGGGLGGG GGG GKGGGLGGGIGKGGGLGGG
Sbjct: 181 IGKGGGLGGGAGAGGGFGKGGGLGGGIGKGGGLGGGAGGGIGKGGGLGGGIGKGGGLGGG 240
Query: 241 AGGG------IGKGGGFGGGAGGSVGGGIGKGGGLGGGIGKGGGFGGGAGGGTGGGIGKG 300
AGGG IGKGGG GGG GG GGG GKGGGLGGGIGKGGG GGG GGG GGG GKG
Sbjct: 241 AGGGIGKGGVIGKGGGLGGGVGGGAGGGFGKGGGLGGGIGKGGGLGGGVGGGAGGGFGKG 300
Query: 301 GGL--------------GGGAGGGFGKGGGFGGGIGKGGGL----GGGIGKGGGLGGGI- 360
GGL GGGAGGGFGKGGG GGGIGKGGGL GGG GKGGGLGGGI
Sbjct: 301 GGLGGGIGKGGGLGGGVGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIG 360
Query: 361 -----GGGAGGGGGSGGGFGGGIGKGGGLGGGGGSG-------GGG---GGGFGGGVGGG 420
GGGAGGG G GGG GGGIGKGGG GGG G G GGG GGGFGGGVGGG
Sbjct: 361 KGGGLGGGAGGGFGKGGGLGGGIGKGGGFGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGG 420
Query: 421 AGGGGGFGGGFGKGGGLGGGSGGGFGGGFGG------GGGSGGGFGGGGGFGGGGGSGHH 429
AGGGGG GGG G GGG G G GGGFG GFG GGG GGGFGGGGGF GGGG GHH
Sbjct: 421 AGGGGGGGGGGGGGGGGGFGKGGGFGSGFGSGFGGGVGGGGGGGFGGGGGF-GGGGIGHH 477
BLAST of Sed0017820 vs. ExPASy TrEMBL
Match:
A0A6J1L3V9 (glycine-rich cell wall structural protein-like isoform X5 OS=Cucurbita maxima OX=3661 GN=LOC111498925 PE=4 SV=1)
HSP 1 Score: 218.0 bits (554), Expect = 7.6e-53
Identity = 354/460 (76.96%), Postives = 367/460 (79.78%), Query Frame = 0
Query: 1 MASGWKRVALLSLLCFHVLQSSVFAKEVADEKEEKFLFFGKSGGLGGGFGGGFG-GGGGG 60
MA+G RVALLS LCF+VL SV AKEV + +EEKFLFFGKSGGLG GFGGG G GGG G
Sbjct: 1 MATGCNRVALLSFLCFYVLVCSVVAKEVGNGEEEKFLFFGKSGGLGVGFGGGSGFGGGFG 60
Query: 61 GGGFGIGGGAGAGGGFGGGIGKGGGLGSGGGAGGGFGKGGGLGSGIGKGGGIGGGVGGGF 120
GGG G GGG+G GGGFGG G G+G GGGAGGG G G G G+G GKGGG+GGG GGGF
Sbjct: 61 GGGGGGGGGSGGGGGFGG----GSGIGIGGGAGGGAGGGVGGGAGFGKGGGLGGGAGGGF 120
Query: 121 GKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGNGIGKGGGLGGGA--------------GG 180
GKGGGLGGGIGKGGGLGGG GG G GGGLG GIGKGGGLGGGA GG
Sbjct: 121 GKGGGLGGGIGKGGGLGGGVGG--GAGGGLGGGIGKGGGLGGGAGGGLGGGIGKGGGLGG 180
Query: 181 GFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGL----GGGTGGGFGKGGGL 240
G+GKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGL GGG GGG GKGGGL
Sbjct: 181 GYGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGVGGGVGGGIGKGGGL 240
Query: 241 GGGIGKGGGLGGGAGGGIGKGGGFGG--GAGGSVGGGIGKGGGLGGGIGKGGGFGGGA-- 300
GGGIGKGGGLGGGAGGG GKGGG GG G GG +GGG G G G GGGIGKGGG GGGA
Sbjct: 241 GGGIGKGGGLGGGAGGGYGKGGGLGGGIGKGGGLGGGAGGGFGKGGGIGKGGGLGGGAGG 300
Query: 301 ----GGGTGGGIGKGGGLGGGAGGGFGKGGGFGGGIGKGGGLGGGIGKGGGLGGGIGGGA 360
GGG GGGIGKGGGLGGGAGGG+GKGGG GGGIGKGGGLGGG+ GGG GGG+GGG
Sbjct: 301 GFGKGGGLGGGIGKGGGLGGGAGGGYGKGGGLGGGIGKGGGLGGGV--GGGAGGGLGGGV 360
Query: 361 GGGGGSGGGFGGGIGKGGGL---GGGGGSGGGGGGGFGGGVGGGAGGGGGFGGGFGKGGG 420
GGG G GGG GGGIG GGGL GGGGG GGGGGGG GGG GGG G GGGFGGGFGKGGG
Sbjct: 361 GGGFGKGGGLGGGIGSGGGLGGGGGGGGGGGGGGGGGGGGFGGGFGKGGGFGGGFGKGGG 420
Query: 421 LGGGSGGGFGGGFGGGGGSGGGFGGGGGFGGGGGS--GHH 429
GGGSGGGFGGGFGGGGG GGGFGGG GFGGGGG GHH
Sbjct: 421 FGGGSGGGFGGGFGGGGGVGGGFGGGSGFGGGGGGGIGHH 452
BLAST of Sed0017820 vs. ExPASy TrEMBL
Match:
A0A6J1L135 (glycine-rich cell wall structural protein-like isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111498925 PE=4 SV=1)
HSP 1 Score: 216.9 bits (551), Expect = 1.7e-52
Identity = 353/460 (76.74%), Postives = 367/460 (79.78%), Query Frame = 0
Query: 1 MASGWKRVALLSLLCFHVLQSSVFAKEVADEKEEKFLFFGKSGGLGGGFGGGFG-GGGGG 60
MA+G RVALLS LCF+VL SV AKEV + +EEKFLFFGKSGGLG GFGGG G GGG G
Sbjct: 1 MATGCNRVALLSFLCFYVLVCSVVAKEVGNGEEEKFLFFGKSGGLGVGFGGGSGFGGGFG 60
Query: 61 GGGFGIGGGAGAGGGFGGGIGKGGGLGSGGGAGGGFGKGGGLGSGIGKGGGIGGGVGGGF 120
GGG G GGG+G GGGFGG G G+G GGGAGGG G G G G+G GKGGG+GGG GGGF
Sbjct: 61 GGGGGGGGGSGGGGGFGG----GSGIGIGGGAGGGAGGGVGGGAGFGKGGGLGGGAGGGF 120
Query: 121 GKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGNGIGKGGGLGGGA--------------GG 180
GKGGGLGGGIGKGGGLGGG GG G GGGLG GIGKGGGLGGGA GG
Sbjct: 121 GKGGGLGGGIGKGGGLGGGVGG--GAGGGLGGGIGKGGGLGGGAGGGLGGGIGKGGGLGG 180
Query: 181 GFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGL----GGGTGGGFGKGGGL 240
G+GKGGGLGGGIGKGGGLGGGAGGG+GKGGGLGGGIGKGGGL GGG GGG GKGGGL
Sbjct: 181 GYGKGGGLGGGIGKGGGLGGGAGGGYGKGGGLGGGIGKGGGLGGGVGGGVGGGIGKGGGL 240
Query: 241 GGGIGKGGGLGGGAGGGIGKGGGFGG--GAGGSVGGGIGKGGGLGGGIGKGGGFGGGA-- 300
GGGIGKGGGLGGGAGGG GKGGG GG G GG +GGG G G G GGGIGKGGG GGGA
Sbjct: 241 GGGIGKGGGLGGGAGGGYGKGGGLGGGIGKGGGLGGGAGGGFGKGGGIGKGGGLGGGAGG 300
Query: 301 ----GGGTGGGIGKGGGLGGGAGGGFGKGGGFGGGIGKGGGLGGGIGKGGGLGGGIGGGA 360
GGG GGGIGKGGGLGGGAGGG+GKGGG GGGIGKGGGLGGG+ GGG GGG+GGG
Sbjct: 301 GFGKGGGLGGGIGKGGGLGGGAGGGYGKGGGLGGGIGKGGGLGGGV--GGGAGGGLGGGV 360
Query: 361 GGGGGSGGGFGGGIGKGGGL---GGGGGSGGGGGGGFGGGVGGGAGGGGGFGGGFGKGGG 420
GGG G GGG GGGIG GGGL GGGGG GGGGGGG GGG GGG G GGGFGGGFGKGGG
Sbjct: 361 GGGFGKGGGLGGGIGSGGGLGGGGGGGGGGGGGGGGGGGGFGGGFGKGGGFGGGFGKGGG 420
Query: 421 LGGGSGGGFGGGFGGGGGSGGGFGGGGGFGGGGGS--GHH 429
GGGSGGGFGGGFGGGGG GGGFGGG GFGGGGG GHH
Sbjct: 421 FGGGSGGGFGGGFGGGGGVGGGFGGGSGFGGGGGGGIGHH 452
BLAST of Sed0017820 vs. ExPASy TrEMBL
Match:
A0A6J1KUW5 (glycine-rich cell wall structural protein-like isoform X8 OS=Cucurbita maxima OX=3661 GN=LOC111498925 PE=4 SV=1)
HSP 1 Score: 215.3 bits (547), Expect = 4.9e-52
Identity = 352/461 (76.36%), Postives = 364/461 (78.96%), Query Frame = 0
Query: 1 MASGWKRVALLSLLCFHVLQSSVFAKEVADEKEEKFLFFGKSGGLGGGFGGGFG-GGGGG 60
MA+G RVALLS LCF+VL SV AKEV + +EEKFLFFGKSGGLG GFGGG G GGG G
Sbjct: 1 MATGCNRVALLSFLCFYVLVCSVVAKEVGNGEEEKFLFFGKSGGLGVGFGGGSGFGGGFG 60
Query: 61 GGGFGIGGGAGAGGGFGGGIGKGGGLGSGGGAGGGFGKGGGLGSGIGKGGGIGGGVGGGF 120
GGG G GGG+G GGGFGG G G+G GGGAGGG G G G G+G GKGGG+GGG GGGF
Sbjct: 61 GGGGGGGGGSGGGGGFGG----GSGIGIGGGAGGGAGGGVGGGAGFGKGGGLGGGAGGGF 120
Query: 121 GKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGNGIGKGGGLGGGA--------------GG 180
GKGGGLGGGIGKGGGLGGG GG G GGGLG GIGKGGGLGGGA GG
Sbjct: 121 GKGGGLGGGIGKGGGLGGGVGG--GAGGGLGGGIGKGGGLGGGAGGGLGGGIGKGGGLGG 180
Query: 181 GFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGTGGGFGKGGGLGGGI 240
G+GKGGGLGGGIGKGGGLGGGAGGGFGKGGG GGG GKGGGLGGG G G G GGG+GGG+
Sbjct: 181 GYGKGGGLGGGIGKGGGLGGGAGGGFGKGGGAGGGYGKGGGLGGGIGKGGGLGGGVGGGV 240
Query: 241 GKGGGLGGGAGGGIGKGGGFGGGAGGSVGGGIGKGGGLGGGIGKGGGFGGGAGG--GTGG 300
G G G GGG GGGIGKGGG GGGA GGG GKGGGLGGGIGKGGG GGGAGG G GG
Sbjct: 241 GGGIGKGGGLGGGIGKGGGLGGGA----GGGYGKGGGLGGGIGKGGGLGGGAGGGFGKGG 300
Query: 301 GIGKGGGLGGGAGGGFGKGGGFGGGI--------------GKGGGLGGGIGKGGGLGGGI 360
GIGKGGGLGGGAGGGFGKGGG GGGI GKGGGLGGGIGKGGGLGGG+
Sbjct: 301 GIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGYGKGGGLGGGIGKGGGLGGGV 360
Query: 361 GGGAGGGGGSGGGFGGGIGKGGGLGGGGGSGGGGGGGFGGGVGGGAGGGGGFGGGFGKGG 420
GGGA GGG GGG GGG GKGGGLGGG GSGGGGGGG GGG GGG G GGGFGGGFGKGG
Sbjct: 361 GGGA--GGGLGGGVGGGFGKGGGLGGGIGSGGGGGGGGGGGFGGGFGKGGGFGGGFGKGG 420
Query: 421 GLGGGSGGGFGGGFGGGGGSGGGFGGGGGFGGGGGS--GHH 429
G GGGSGGGFGGGFGGGGG GGGFGGG GFGGGGG GHH
Sbjct: 421 GFGGGSGGGFGGGFGGGGGVGGGFGGGSGFGGGGGGGIGHH 449
BLAST of Sed0017820 vs. ExPASy TrEMBL
Match:
A0A6J1KWR5 (glycine-rich cell wall structural protein-like isoform X12 OS=Cucurbita maxima OX=3661 GN=LOC111498925 PE=4 SV=1)
HSP 1 Score: 213.0 bits (541), Expect = 2.4e-51
Identity = 348/450 (77.33%), Postives = 361/450 (80.22%), Query Frame = 0
Query: 1 MASGWKRVALLSLLCFHVLQSSVFAKEVADEKEEKFLFFGKSGGLGGGFGGGFG-GGGGG 60
MA+G RVALLS LCF+VL SV AKEV + +EEKFLFFGKSGGLG GFGGG G GGG G
Sbjct: 1 MATGCNRVALLSFLCFYVLVCSVVAKEVGNGEEEKFLFFGKSGGLGVGFGGGSGFGGGFG 60
Query: 61 GGGFGIGGGAGAGGGFGGGIGKGGGLGSGGGAGGGFGKGGGLGSGIGKGGGIGGGVGGGF 120
GGG G GGG+G GGGFGG G G+G GGGAGGG G G G G+G GKGGG+GGG GGGF
Sbjct: 61 GGGGGGGGGSGGGGGFGG----GSGIGIGGGAGGGAGGGVGGGAGFGKGGGLGGGAGGGF 120
Query: 121 GKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGNGIGKGGGLGGGA--------------GG 180
GKGGGLGGGIGKGGGLGGG GG G GGGLG GIGKGGGLGGGA GG
Sbjct: 121 GKGGGLGGGIGKGGGLGGGVGG--GAGGGLGGGIGKGGGLGGGAGGGLGGGIGKGGGLGG 180
Query: 181 GFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGTGGGFGKGGGLGGGI 240
G+GKGGGLGGGIGKGGGLGGGAGGGFGKGGG GGG GKGGGLGGG G G G GGG+GGG+
Sbjct: 181 GYGKGGGLGGGIGKGGGLGGGAGGGFGKGGGAGGGYGKGGGLGGGIGKGGGLGGGVGGGV 240
Query: 241 GKGGGLGGGAGGGIGKGGGFGGGAGGSVGGGIGKGGGLGGGIGKGGGFGGGAGG--GTGG 300
G G G GGG GGGIGKGGG GGGA GGG GKGGGLGGGIGKGGG GGGAGG G GG
Sbjct: 241 GGGIGKGGGLGGGIGKGGGLGGGA----GGGYGKGGGLGGGIGKGGGLGGGAGGGFGKGG 300
Query: 301 GIGKGGGLGGGAGGGFGKGGGFGGGIGKGGGLGGGIGKGGGLGGGIGGGAGGGGGSGGGF 360
GIGKGGGLGGGAGGGFGKGGG GGGIGKGGGLGGG+ GGG GGG+GGG GGG G GGG
Sbjct: 301 GIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGV--GGGAGGGLGGGVGGGFGKGGGL 360
Query: 361 GGGIGKGGGL---GGGGGSGGGGGGGFGGGVGGGAGGGGGFGGGFGKGGGLGGGSGGGFG 420
GGGIG GGGL GGGGG GGGGGGG GGG GGG G GGGFGGGFGKGGG GGGSGGGFG
Sbjct: 361 GGGIGSGGGLGGGGGGGGGGGGGGGGGGGGFGGGFGKGGGFGGGFGKGGGFGGGSGGGFG 420
Query: 421 GGFGGGGGSGGGFGGGGGFGGGGGS--GHH 429
GGFGGGGG GGGFGGG GFGGGGG GHH
Sbjct: 421 GGFGGGGGVGGGFGGGSGFGGGGGGGIGHH 438
BLAST of Sed0017820 vs. TAIR 10
Match:
AT3G23450.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; Has 694543 Blast hits to 47111 proteins in 2535 species: Archae - 1794; Bacteria - 163056; Metazoa - 258989; Fungi - 49151; Plants - 70496; Viruses - 8919; Other Eukaryotes - 142138 (source: NCBI BLink). )
HSP 1 Score: 138.3 bits (347), Expect = 1.5e-32
Identity = 318/454 (70.04%), Postives = 343/454 (75.55%), Query Frame = 0
Query: 10 LLSLLCFHVLQSSVFAKEVA---DEKEEKFLFFGKSGGLGGGFGGGFGGGGGGGGGFGIG 69
LL+LLCFHV +V A++V+ DE E+ + GK GG GGGFGGG GGG GGG G G G
Sbjct: 10 LLALLCFHVFVVNVVARDVSSGRDEDEKTLVGGGKGGGFGGGFGGGAGGGVGGGAGGGFG 69
Query: 70 GGAGAGGGFGGGIGKGGGLGSGGGAGGGFGKGGGLGSGI--GKGGGIGGGVGGGFGKGGG 129
GGAG G G GGG G GGG G GGG GGG G GGG G G+ G GGG GGGVGGGFGKGGG
Sbjct: 70 GGAGGGFGGGGGGGGGGGGGGGGGFGGGGGFGGGHGGGVGGGVGGGHGGGVGGGFGKGGG 129
Query: 130 LGGGIGKGGGL------GGGAGGGFGKGGGLGNGIGKGGGL------GGGAGGGFGKGGG 189
+GGGIGKGGG+ GGG GGG GKGGG+G GIGKGGG+ GGG GGG GKGGG
Sbjct: 130 IGGGIGKGGGVGGGIGKGGGIGGGIGKGGGVGGGIGKGGGIGGGIGKGGGIGGGIGKGGG 189
Query: 190 LGGGIGKGGGL------GGGAGGGFGKGGGLGGGIGKGGGLGGGTGGGFGKGGGLGGGIG 249
+GGGIGKGGG+ GGG GGGFGKGGG+GGGIGKGGG+ GGGFGKGGG+GGGIG
Sbjct: 190 IGGGIGKGGGIGGGIGKGGGVGGGFGKGGGVGGGIGKGGGV----GGGFGKGGGVGGGIG 249
Query: 250 KGGGL------GGGAGGGIGKGGGFGG--GAGGSVGGGIGKGGGLGGGIGKGGGFGG--G 309
KGGG+ GGG GGGIGKGGG GG G GG +GGGIGKGGG+GGGIGKGGG GG G
Sbjct: 250 KGGGIGGGIGKGGGIGGGIGKGGGIGGGIGKGGGIGGGIGKGGGIGGGIGKGGGIGGGIG 309
Query: 310 AGGGTGGGIGKGGGLGGGAGGGFGKGGGFGGGIGKGGGLGGGIGKGGGLGGGIGGGAGGG 369
GGG GGGIGKGGG+GG GGGFGKGGG GGGIGKGGG+GG G G G GGGIGGG G G
Sbjct: 310 KGGGIGGGIGKGGGIGG--GGGFGKGGGIGGGIGKGGGIGG--GGGFGKGGGIGGGIGKG 369
Query: 370 GGSGGGFGGGIGKGGGLGGGGGSGGGGGGGFGGGVGGGAGGGGGF--GGGFGKGGGLGGG 429
GG GGGFG G G GGG+GGGGG GGGGG G GGG+GGG G GGGF GGGFGKGGG+GGG
Sbjct: 370 GGIGGGFGKGGGIGGGIGGGGGFGGGGGFGKGGGIGGGIGKGGGFGGGGGFGKGGGIGGG 429
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_031737441.1 | 2.6e-55 | 79.23 | LOW QUALITY PROTEIN: glycine-rich cell wall structural protein [Cucumis sativus] | [more] |
XP_023006068.1 | 1.4e-53 | 78.64 | glycine-rich cell wall structural protein-like isoform X14 [Cucurbita maxima] | [more] |
KAA0050716.1 | 1.9e-53 | 76.25 | hypothetical protein E6C27_scaffold560G00130 [Cucumis melo var. makuwa] >TYK0144... | [more] |
KAE8651806.1 | 4.1e-53 | 78.47 | hypothetical protein Csa_006078 [Cucumis sativus] | [more] |
XP_038906570.1 | 1.6e-52 | 76.24 | glycine-rich cell wall structural protein isoform X1 [Benincasa hispida] >XP_038... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BTN6 | 9.0e-54 | 76.25 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1L3V9 | 7.6e-53 | 76.96 | glycine-rich cell wall structural protein-like isoform X5 OS=Cucurbita maxima OX... | [more] |
A0A6J1L135 | 1.7e-52 | 76.74 | glycine-rich cell wall structural protein-like isoform X4 OS=Cucurbita maxima OX... | [more] |
A0A6J1KUW5 | 4.9e-52 | 76.36 | glycine-rich cell wall structural protein-like isoform X8 OS=Cucurbita maxima OX... | [more] |
A0A6J1KWR5 | 2.4e-51 | 77.33 | glycine-rich cell wall structural protein-like isoform X12 OS=Cucurbita maxima O... | [more] |
Match Name | E-value | Identity | Description | |
AT3G23450.1 | 1.5e-32 | 70.04 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |