Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGAAACAGTAGGAGGGAAATGGGAAGAGCGAAGAAGAGAGAAATTCGGTGAAAGGCAGAGTTTGTTGTGTGGTGATAAAATGGTGAATCCGCCTTTTGATTTGGTCGCCATAAGCGTTCCTCCATTCGCATCCGCTCAATTGCTCTCTGAATACTTTGCAAAATTGGAGTTCCAATTCGTTGTGATTTATTGCGATTTAATCTTTGGAGATTTCCGCGGAGCTTTTCACAAGTCCGAAAGGTAAGAAATCTTCAACTTCAATTGCGAATTAATGTCTTGTTTGTCGATTCTGGATAATCGAATTGACGGAATCGATGAGAAGTTCCGTCTCCTATTATAATTCCTTCCTTGATGTGATGCTTTTTTGTATTAGCATCATTCAAATCGGTTTTGTTTTGTTTGATTTGCACTACAATTTGGAAGCATCTGCGACTTAATTTCGTTGAATCGGTCCACAAAATTCCCATCTCTTACTTTTGATGGCGGTTGACCTAACCAATTGTCCTATTTGGCCATTGTTGTCAACGCTGTCAGAACCAACACATACCGATTCTCGAGATCGAACCTGTGACACTGCTGTTGTACTGGTTTACAACCAAATAATGAAACTACGCGCCACTACACATTTGGTTCAAACAAGGCAGTTACATTAAAAGTTACCAAAATCTGATATTGATGATAAGAAAATATGAGAGTTAGCTTTTTATTTCCTTCTTTTTTTAGTTGAATAACAATATTTGATATTGGTAGATTCAAACCTGCGACCTCGTTGAGAATACATGTCAATTACCGGCTCAGCCTGCTTTGGCCGTATTTGCTTTCTCTTTTTTTTTATGAGGAAAAAAATATTAGTTTGAGAATAACTGATGCTCTAGGATTTGAAATTTATCGAATCGTTTCGCACTCTTTCCAACAAATTATTTGGCATTAATCTCTATCTGTTCCTTCTCGTCGATCTTGCGAAATTTTTTGTTGTTTATTTTCTGAATCTACAGGATGGGGTCTAGACTTCTTCCATTGCACACCTGTGGAGTTTCATTTCTGACCATAGCCCACAGCACATGCTCAAGAGCTCAAAATCTTCATGGACGGTTGGGTTCAATAACAAGAAAGATAGCCCGAGTAGCCAAGCTTTTGAACCCTTTGATTTTTGTCCTGCAATATCAATGGTTATTGTTCCTCTCCTTCATTGATGATCGTTTACTCACAATTGCAAACATCGTGGAGAAGATTTTTCCTCCATCCAAACTCATTTTCGATAACATCGACAACCTTCTTCATCTGATCGAAACTTTTCCTAGAAAATTTGATGATGCTGTTGACAAGTTACCCTGCTTCAACAAGGTTTTGTTCCTAGAGTGGGCAGTGACCCAAGCCATATCTTTACTCAAGTTTACGATAGCCATTTTAATGAACTGGGGAAGAGATGGTACTAGAGAGAAGGAGATCTTGGTTGATATGAACTACGGTGAGGGTCGTAATGGATCGAAATCTGAGTGCTGCTTGGAAGGAACCATGTCTTCTGTTGCCATGAATGGCACTCATAAGGAAGTTATGAAAATGGAAACAAAGGGGGAGGAAGATGATGAAAAGGGCACTTACAGGAAATCCATGGAAGATAAAGAAGAACTCGAACACGAAGAGAGTTGCAAAAAGGGTGAGAAAAATGAGGCAAAAATGGAAGAACCAATGGAAAAAGCAGAAGGAAATGAAGTAATTCCAGACCAGGGTTATAAAGGGGAAGAAGCAAGGGTAGTGGAAAATGGATATGAAGAAGAGGCAAGGAATAATGGAAGCATAGAAAATCAAGAGGACATTTTGAAATTGTTTGAGACAGCTTGGCTCATGAAACCAGCTTCAATTATGTAAACATGTGACATTTTAAGACAAGATGGCCAAACCTTTGTTAAACTGGGTTTTGTAAGTTGTGTCTTTTGTAAATAGAATTCTGAATATGCTGTATATATCAAATTGTTTATGCTCCCGTACCATTTACTAATTTCTTTTGTATATGTTATCATTGAGAAATAGAATAACAGGA
mRNA sequence
GAAGAAACAGTAGGAGGGAAATGGGAAGAGCGAAGAAGAGAGAAATTCGGTGAAAGGCAGAGTTTGTTGTGTGGTGATAAAATGGTGAATCCGCCTTTTGATTTGGTCGCCATAAGCGTTCCTCCATTCGCATCCGCTCAATTGCTCTCTGAATACTTTGCAAAATTGGAGTTCCAATTCGTTGTGATTTATTGCGATTTAATCTTTGGAGATTTCCGCGGAGCTTTTCACAAGTCCGAAAGGATGGGGTCTAGACTTCTTCCATTGCACACCTGTGGAGTTTCATTTCTGACCATAGCCCACAGCACATGCTCAAGAGCTCAAAATCTTCATGGACGGTTGGGTTCAATAACAAGAAAGATAGCCCGAGTAGCCAAGCTTTTGAACCCTTTGATTTTTGTCCTGCAATATCAATGGTTATTGTTCCTCTCCTTCATTGATGATCGTTTACTCACAATTGCAAACATCGTGGAGAAGATTTTTCCTCCATCCAAACTCATTTTCGATAACATCGACAACCTTCTTCATCTGATCGAAACTTTTCCTAGAAAATTTGATGATGCTGTTGACAAGTTACCCTGCTTCAACAAGGTTTTGTTCCTAGAGTGGGCAGTGACCCAAGCCATATCTTTACTCAAGTTTACGATAGCCATTTTAATGAACTGGGGAAGAGATGGTACTAGAGAGAAGGAGATCTTGGTTGATATGAACTACGGTGAGGGTCGTAATGGATCGAAATCTGAGTGCTGCTTGGAAGGAACCATGTCTTCTGTTGCCATGAATGGCACTCATAAGGAAGTTATGAAAATGGAAACAAAGGGGGAGGAAGATGATGAAAAGGGCACTTACAGGAAATCCATGGAAGATAAAGAAGAACTCGAACACGAAGAGAGTTGCAAAAAGGGTGAGAAAAATGAGGCAAAAATGGAAGAACCAATGGAAAAAGCAGAAGGAAATGAAGTAATTCCAGACCAGGGTTATAAAGGGGAAGAAGCAAGGGTAGTGGAAAATGGATATGAAGAAGAGGCAAGGAATAATGGAAGCATAGAAAATCAAGAGGACATTTTGAAATTGTTTGAGACAGCTTGGCTCATGAAACCAGCTTCAATTATGTAAACATGTGACATTTTAAGACAAGATGGCCAAACCTTTGTTAAACTGGGTTTTGTAAGTTGTGTCTTTTGTAAATAGAATTCTGAATATGCTGTATATATCAAATTGTTTATGCTCCCGTACCATTTACTAATTTCTTTTGTATATGTTATCATTGAGAAATAGAATAACAGGA
Coding sequence (CDS)
ATGGTGAATCCGCCTTTTGATTTGGTCGCCATAAGCGTTCCTCCATTCGCATCCGCTCAATTGCTCTCTGAATACTTTGCAAAATTGGAGTTCCAATTCGTTGTGATTTATTGCGATTTAATCTTTGGAGATTTCCGCGGAGCTTTTCACAAGTCCGAAAGGATGGGGTCTAGACTTCTTCCATTGCACACCTGTGGAGTTTCATTTCTGACCATAGCCCACAGCACATGCTCAAGAGCTCAAAATCTTCATGGACGGTTGGGTTCAATAACAAGAAAGATAGCCCGAGTAGCCAAGCTTTTGAACCCTTTGATTTTTGTCCTGCAATATCAATGGTTATTGTTCCTCTCCTTCATTGATGATCGTTTACTCACAATTGCAAACATCGTGGAGAAGATTTTTCCTCCATCCAAACTCATTTTCGATAACATCGACAACCTTCTTCATCTGATCGAAACTTTTCCTAGAAAATTTGATGATGCTGTTGACAAGTTACCCTGCTTCAACAAGGTTTTGTTCCTAGAGTGGGCAGTGACCCAAGCCATATCTTTACTCAAGTTTACGATAGCCATTTTAATGAACTGGGGAAGAGATGGTACTAGAGAGAAGGAGATCTTGGTTGATATGAACTACGGTGAGGGTCGTAATGGATCGAAATCTGAGTGCTGCTTGGAAGGAACCATGTCTTCTGTTGCCATGAATGGCACTCATAAGGAAGTTATGAAAATGGAAACAAAGGGGGAGGAAGATGATGAAAAGGGCACTTACAGGAAATCCATGGAAGATAAAGAAGAACTCGAACACGAAGAGAGTTGCAAAAAGGGTGAGAAAAATGAGGCAAAAATGGAAGAACCAATGGAAAAAGCAGAAGGAAATGAAGTAATTCCAGACCAGGGTTATAAAGGGGAAGAAGCAAGGGTAGTGGAAAATGGATATGAAGAAGAGGCAAGGAATAATGGAAGCATAGAAAATCAAGAGGACATTTTGAAATTGTTTGAGACAGCTTGGCTCATGAAACCAGCTTCAATTATGTAA
Protein sequence
MVNPPFDLVAISVPPFASAQLLSEYFAKLEFQFVVIYCDLIFGDFRGAFHKSERMGSRLLPLHTCGVSFLTIAHSTCSRAQNLHGRLGSITRKIARVAKLLNPLIFVLQYQWLLFLSFIDDRLLTIANIVEKIFPPSKLIFDNIDNLLHLIETFPRKFDDAVDKLPCFNKVLFLEWAVTQAISLLKFTIAILMNWGRDGTREKEILVDMNYGEGRNGSKSECCLEGTMSSVAMNGTHKEVMKMETKGEEDDEKGTYRKSMEDKEELEHEESCKKGEKNEAKMEEPMEKAEGNEVIPDQGYKGEEARVVENGYEEEARNNGSIENQEDILKLFETAWLMKPASIM
Homology
BLAST of Sed0017756 vs. NCBI nr
Match:
XP_038884034.1 (myelin transcription factor 1 [Benincasa hispida] >XP_038884035.1 myelin transcription factor 1 [Benincasa hispida])
HSP 1 Score: 328.9 bits (842), Expect = 5.1e-86
Identity = 202/343 (58.89%), Postives = 230/343 (67.06%), Query Frame = 0
Query: 55 MGSRLLPLHTCGVSFLTIAHSTCSRAQNLHGRLGSITRKIARVAKLLNPLIFVLQYQWLL 114
M SR PL TC VSFL +AHSTCSRAQNL GRLGSITRK+ R+AKL+ PLIFVLQYQ LL
Sbjct: 1 MSSRRRPLQTCVVSFLAVAHSTCSRAQNLDGRLGSITRKMVRIAKLMKPLIFVLQYQCLL 60
Query: 115 FLSFIDDRLLTIANIVEKIFPPSKLIFDNIDNLLHLIETFPRKFDDAVDKLPCFNKVLFL 174
LSFIDDRLL IANI+EKIFPP KL+FD ID+LLHLIETFP KFDDAVD++PCFN+VL L
Sbjct: 61 VLSFIDDRLLAIANILEKIFPPFKLVFDKIDHLLHLIETFPSKFDDAVDEIPCFNQVLLL 120
Query: 175 EWAVTQAISLLKFTIAILMNWGRDGTREKEILVDMNYGEGRNG---SKSECCLEGTMSSV 234
+W VT AISLLKF I ILMNWGRDGTREKEILVDMNY EGR KSECC EG +SSV
Sbjct: 121 DWTVTHAISLLKFMITILMNWGRDGTREKEILVDMNYKEGRKSESTDKSECCSEGIVSSV 180
Query: 235 -----------------AMNGTHKEVMKMETKGEEDD------EKGTYRKSMEDKEE--- 294
++ GT KEV+KM+ +E++ EKGT R M+DKE+
Sbjct: 181 SETQQAEAAMDEKMKSNSVKGTCKEVLKMDEDSKENEKSTNGVEKGT-RNEMDDKEDCKN 240
Query: 295 ---------------LEHEESCKKGEKNEAK---MEEPMEKAEGNEVIPDQG-------Y 341
+E ESCKK E NE K MEE +EK EGNE IPD+G
Sbjct: 241 NEKGNSKEVEKGIEVVEDNESCKKDENNENKMIRMEESVEKTEGNEEIPDEGNSRVKEEK 300
BLAST of Sed0017756 vs. NCBI nr
Match:
XP_023538125.1 (uncharacterized protein LOC111798984 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 325.5 bits (833), Expect = 5.6e-85
Identity = 185/298 (62.08%), Postives = 223/298 (74.83%), Query Frame = 0
Query: 52 SERMGSRLLPLHTCGVSFLTIAHSTCSRAQNLHGRLGSITRKIARVAKLLNPLIFVLQYQ 111
++RM S PLHTC VSFL IAH SRAQNL G LGS TR++ ++ KL+ PLI VLQYQ
Sbjct: 9 TQRMSSPRRPLHTCSVSFLAIAHGIFSRAQNLDGWLGSTTRRMVQITKLVKPLILVLQYQ 68
Query: 112 WLLFLSFIDDRLLTIANIVEKIFPPSKLIFDNIDNLLHLIETFPRKFDDAVDKLPCFNKV 171
W LFLSFIDDRLL I+N VEKIFPPS+L+FD ID+LLH++ETFP KF DAVDK+PCFN+V
Sbjct: 69 WSLFLSFIDDRLLAISNFVEKIFPPSRLVFDKIDDLLHMVETFPGKFADAVDKVPCFNQV 128
Query: 172 LFLEWAVTQAISLLKFTIAILMNWGRDGTREKEILVDMNYGEGRNGSKSECCLEGTMSSV 231
LFLEWAVT AISLL+F I ILMN GRDGTREKEILVDMNY +GRNGS+S EGT+S V
Sbjct: 129 LFLEWAVTHAISLLEFMITILMNLGRDGTREKEILVDMNYNKGRNGSESAARSEGTISCV 188
Query: 232 ------AMNGTHKEVMKMETKGEEDDEKGTYRKSMEDKEELEHEE--SCKKGEKNEAKME 291
AMNG+ KEV KM +G+EDD KGTY ++ME KEE ++E S KK E +E+
Sbjct: 189 SETQQGAMNGSSKEVQKMGREGKEDDCKGTYNRAMEGKEEFGNKEKGSTKKVEGSES--- 248
Query: 292 EPMEKAEGNEVIPDQGYKGEEARVVENGYEEEAR-NNGSIENQEDILKLFETAWLMKP 341
+AEGNE G K ++ V + YEEE +NGSI+ ++DIL+LFET+WLMKP
Sbjct: 249 ---GEAEGNE-----GMKSKKEGVKDCEYEEEEEGSNGSIQKEDDILELFETSWLMKP 295
BLAST of Sed0017756 vs. NCBI nr
Match:
XP_022951545.1 (uncharacterized protein LOC111454325 [Cucurbita moschata] >XP_022951546.1 uncharacterized protein LOC111454325 [Cucurbita moschata])
HSP 1 Score: 323.9 bits (829), Expect = 1.6e-84
Identity = 186/298 (62.42%), Postives = 224/298 (75.17%), Query Frame = 0
Query: 52 SERMGSRLLPLHTCGVSFLTIAHSTCSRAQNLHGRLGSITRKIARVAKLLNPLIFVLQYQ 111
++RM S PLHTC VSFL IAH SRAQNL G LGS TRK+ ++ KL+ P+I VLQYQ
Sbjct: 9 TQRMSSPRRPLHTCSVSFLAIAHGIFSRAQNLDGWLGSTTRKMVQITKLVKPVILVLQYQ 68
Query: 112 WLLFLSFIDDRLLTIANIVEKIFPPSKLIFDNIDNLLHLIETFPRKFDDAVDKLPCFNKV 171
W LFLSFIDDRLL I+N VEKIFPPS+L+FD ID++LHL+ETFP KF DAVDKLPCFN+V
Sbjct: 69 WSLFLSFIDDRLLAISNFVEKIFPPSRLVFDKIDDVLHLVETFPGKFADAVDKLPCFNQV 128
Query: 172 LFLEWAVTQAISLLKFTIAILMNWGRDGTREKEILVDMNYGEGRNGSKSECCLEGTMSSV 231
L LEWAVT AISLL+F I ILMN GRDGTREKEILVDMNY +GRNG +S EGT+S V
Sbjct: 129 LLLEWAVTHAISLLEFMITILMNLGRDGTREKEILVDMNYNKGRNGPESAVKSEGTISCV 188
Query: 232 ------AMNGTHKEVMKMETKGEEDDEKGTYRKSMEDKEELEHEE--SCKKGEKNEAKME 291
AMNG+ KEV+K +G+EDD KGTY ++ME KEE ++E S KK E +E+ +
Sbjct: 189 SETQQGAMNGSCKEVVKTGREGKEDDCKGTYNRAMEGKEEFGNKEKGSTKKVEGSESG-K 248
Query: 292 EPMEKAEGNEVIPDQGYKGEEARVVENGYEEEAR-NNGSIENQEDILKLFETAWLMKP 341
MEKAEGNE G K ++ V + YEEE +NGSI+ ++DIL+LFET+WLMKP
Sbjct: 249 AKMEKAEGNE-----GMKSKKEGVKDCEYEEEEEGSNGSIQKEDDILELFETSWLMKP 300
BLAST of Sed0017756 vs. NCBI nr
Match:
XP_023002168.1 (uncharacterized protein LOC111496109 [Cucurbita maxima])
HSP 1 Score: 323.2 bits (827), Expect = 2.8e-84
Identity = 183/297 (61.62%), Postives = 226/297 (76.09%), Query Frame = 0
Query: 52 SERMGSRLLPLHTCGVSFLTIAHSTCSRAQNLHGRLGSITRKIARVAKLLNPLIFVLQYQ 111
++RM S PLHTC VSFL IAH SRAQNL G LGS TRK+ ++ KL+ PLI VLQYQ
Sbjct: 9 TQRMSSPRRPLHTCSVSFLAIAHGIFSRAQNLDGWLGSTTRKMVQITKLVKPLILVLQYQ 68
Query: 112 WLLFLSFIDDRLLTIANIVEKIFPPSKLIFDNIDNLLHLIETFPRKFDDAVDKLPCFNKV 171
W LFLSFIDDRLL I+N VE++FPPS+L+FD ID++LH++ETFP KF DAVDKLPCFN+V
Sbjct: 69 WSLFLSFIDDRLLAISNFVEQVFPPSRLVFDKIDDVLHMVETFPGKFADAVDKLPCFNQV 128
Query: 172 LFLEWAVTQAISLLKFTIAILMNWGRDGTREKEILVDMNYGEGRNGSKSECCLEGTMSSV 231
LFLEWAVT AI+LL++ I ILMN GRDGTREKEILVDMNY + RNGS+S EGT+S V
Sbjct: 129 LFLEWAVTHAITLLEYMITILMNLGRDGTREKEILVDMNYNKSRNGSESAVKSEGTLSCV 188
Query: 232 ------AMNGTHKEVMKMETKGEEDDEKGTYRKSMEDKEELEHEE--SCKKGEKNEAKME 291
AMNG+ KEV+KM +G+EDD KGTY ++ME KEE ++E S KK E +E+ +
Sbjct: 189 CETQQGAMNGSSKEVVKMGREGKEDDCKGTYNRAMEGKEEFGNKEKGSTKKVEGSESG-K 248
Query: 292 EPMEKAEGNEVIPDQGYKGEEARVVENGYEEEARNNGSIENQEDILKLFETAWLMKP 341
MEKAEGNE + K EE + E+ EEE ++GSI+ ++DIL+LFET+WLMKP
Sbjct: 249 AKMEKAEGNEGMKS---KKEEVKDCEDEEEEEG-SHGSIQKEDDILELFETSWLMKP 300
BLAST of Sed0017756 vs. NCBI nr
Match:
KAG7020130.1 (hypothetical protein SDJN02_16812, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 315.1 bits (806), Expect = 7.6e-82
Identity = 189/331 (57.10%), Postives = 229/331 (69.18%), Query Frame = 0
Query: 40 LIFGDFRGAFHKSE------------------RMGSRLLPLHTCGVSFLTIAHSTCSRAQ 99
L+ +F GAFH S+ +M S PLHTC VSFL IAH RAQ
Sbjct: 47 LVIDEFSGAFHNSKVRNLELQMRIIILFATFLKMSSPRRPLHTCSVSFLAIAHGIFLRAQ 106
Query: 100 NLHGRLGSITRKIARVAKLLNPLIFVLQYQWLLFLSFIDDRLLTIANIVEKIFPPSKLIF 159
NL G LGS TRK+ ++ K++ P+I VLQ QW LFLSFIDDRLL I+N VEKIFPPS+L+F
Sbjct: 107 NLDGWLGSTTRKMVQITKVVKPVILVLQCQWSLFLSFIDDRLLAISNFVEKIFPPSRLVF 166
Query: 160 DNIDNLLHLIETFPRKFDDAVDKLPCFNKVLFLEWAVTQAISLLKFTIAILMNWGRDGTR 219
D ID++LHL+ETFP KF DAVDKLPCFN+VL LEWAVT AISLL+F I ILMN GRDGTR
Sbjct: 167 DKIDDVLHLVETFPGKFADAVDKLPCFNQVLLLEWAVTHAISLLEFMITILMNLGRDGTR 226
Query: 220 EKEILVDMNYGEGRNGSKSECCLEGTMSSV------AMNGTHKEVMKMETKGEEDDEKGT 279
EKEILVDMNY +GRNG +S EGT+S V AMNG+ KEV+KM +G+EDD KGT
Sbjct: 227 EKEILVDMNYNKGRNGPESAVKSEGTISCVSETQQGAMNGSSKEVVKMGREGKEDDCKGT 286
Query: 280 YRKSM--EDKEELEHEE--SCKKGEKNEAKMEEPMEKAEGNEVIPD--QGYKGEEARVVE 339
Y ++M E KEE ++E S KK E +E+ + MEKA GNE + +G K E E
Sbjct: 287 YNRAMEGEGKEEFGNKEKGSNKKVEGSESG-KAKMEKAGGNEGMKSKKEGVKDCEYEEEE 346
Query: 340 NGYEEEARNNGSIENQEDILKLFETAWLMKP 341
EEE +NGSI+ ++DIL+LFET+WLMKP
Sbjct: 347 EEEEEEEGSNGSIQKEDDILELFETSWLMKP 376
BLAST of Sed0017756 vs. ExPASy TrEMBL
Match:
A0A6J1GHV9 (uncharacterized protein LOC111454325 OS=Cucurbita moschata OX=3662 GN=LOC111454325 PE=4 SV=1)
HSP 1 Score: 323.9 bits (829), Expect = 7.9e-85
Identity = 186/298 (62.42%), Postives = 224/298 (75.17%), Query Frame = 0
Query: 52 SERMGSRLLPLHTCGVSFLTIAHSTCSRAQNLHGRLGSITRKIARVAKLLNPLIFVLQYQ 111
++RM S PLHTC VSFL IAH SRAQNL G LGS TRK+ ++ KL+ P+I VLQYQ
Sbjct: 9 TQRMSSPRRPLHTCSVSFLAIAHGIFSRAQNLDGWLGSTTRKMVQITKLVKPVILVLQYQ 68
Query: 112 WLLFLSFIDDRLLTIANIVEKIFPPSKLIFDNIDNLLHLIETFPRKFDDAVDKLPCFNKV 171
W LFLSFIDDRLL I+N VEKIFPPS+L+FD ID++LHL+ETFP KF DAVDKLPCFN+V
Sbjct: 69 WSLFLSFIDDRLLAISNFVEKIFPPSRLVFDKIDDVLHLVETFPGKFADAVDKLPCFNQV 128
Query: 172 LFLEWAVTQAISLLKFTIAILMNWGRDGTREKEILVDMNYGEGRNGSKSECCLEGTMSSV 231
L LEWAVT AISLL+F I ILMN GRDGTREKEILVDMNY +GRNG +S EGT+S V
Sbjct: 129 LLLEWAVTHAISLLEFMITILMNLGRDGTREKEILVDMNYNKGRNGPESAVKSEGTISCV 188
Query: 232 ------AMNGTHKEVMKMETKGEEDDEKGTYRKSMEDKEELEHEE--SCKKGEKNEAKME 291
AMNG+ KEV+K +G+EDD KGTY ++ME KEE ++E S KK E +E+ +
Sbjct: 189 SETQQGAMNGSCKEVVKTGREGKEDDCKGTYNRAMEGKEEFGNKEKGSTKKVEGSESG-K 248
Query: 292 EPMEKAEGNEVIPDQGYKGEEARVVENGYEEEAR-NNGSIENQEDILKLFETAWLMKP 341
MEKAEGNE G K ++ V + YEEE +NGSI+ ++DIL+LFET+WLMKP
Sbjct: 249 AKMEKAEGNE-----GMKSKKEGVKDCEYEEEEEGSNGSIQKEDDILELFETSWLMKP 300
BLAST of Sed0017756 vs. ExPASy TrEMBL
Match:
A0A6J1KSS3 (uncharacterized protein LOC111496109 OS=Cucurbita maxima OX=3661 GN=LOC111496109 PE=4 SV=1)
HSP 1 Score: 323.2 bits (827), Expect = 1.3e-84
Identity = 183/297 (61.62%), Postives = 226/297 (76.09%), Query Frame = 0
Query: 52 SERMGSRLLPLHTCGVSFLTIAHSTCSRAQNLHGRLGSITRKIARVAKLLNPLIFVLQYQ 111
++RM S PLHTC VSFL IAH SRAQNL G LGS TRK+ ++ KL+ PLI VLQYQ
Sbjct: 9 TQRMSSPRRPLHTCSVSFLAIAHGIFSRAQNLDGWLGSTTRKMVQITKLVKPLILVLQYQ 68
Query: 112 WLLFLSFIDDRLLTIANIVEKIFPPSKLIFDNIDNLLHLIETFPRKFDDAVDKLPCFNKV 171
W LFLSFIDDRLL I+N VE++FPPS+L+FD ID++LH++ETFP KF DAVDKLPCFN+V
Sbjct: 69 WSLFLSFIDDRLLAISNFVEQVFPPSRLVFDKIDDVLHMVETFPGKFADAVDKLPCFNQV 128
Query: 172 LFLEWAVTQAISLLKFTIAILMNWGRDGTREKEILVDMNYGEGRNGSKSECCLEGTMSSV 231
LFLEWAVT AI+LL++ I ILMN GRDGTREKEILVDMNY + RNGS+S EGT+S V
Sbjct: 129 LFLEWAVTHAITLLEYMITILMNLGRDGTREKEILVDMNYNKSRNGSESAVKSEGTLSCV 188
Query: 232 ------AMNGTHKEVMKMETKGEEDDEKGTYRKSMEDKEELEHEE--SCKKGEKNEAKME 291
AMNG+ KEV+KM +G+EDD KGTY ++ME KEE ++E S KK E +E+ +
Sbjct: 189 CETQQGAMNGSSKEVVKMGREGKEDDCKGTYNRAMEGKEEFGNKEKGSTKKVEGSESG-K 248
Query: 292 EPMEKAEGNEVIPDQGYKGEEARVVENGYEEEARNNGSIENQEDILKLFETAWLMKP 341
MEKAEGNE + K EE + E+ EEE ++GSI+ ++DIL+LFET+WLMKP
Sbjct: 249 AKMEKAEGNEGMKS---KKEEVKDCEDEEEEEG-SHGSIQKEDDILELFETSWLMKP 300
BLAST of Sed0017756 vs. ExPASy TrEMBL
Match:
A0A5A7V3D3 (Gelsolin-related protein of 125 kDa isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001510 PE=4 SV=1)
HSP 1 Score: 311.6 bits (797), Expect = 4.1e-81
Identity = 194/343 (56.56%), Postives = 230/343 (67.06%), Query Frame = 0
Query: 55 MGSRLLPLHTCGVSFLTIAHSTCSRAQNLHGRLGSITRKIARVAKLLNPLIFVLQYQWLL 114
M SR PL TCGVSFL +AHSTCSRAQNL GRLGSITRK+ +AKL+NPLIF+L+YQ LL
Sbjct: 1 MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL 60
Query: 115 FLSFIDDRLLTIANIVEKIFPPSKLIFDNIDNLLHLIETFPRKFDDAVDKLPCFNKVLFL 174
LSFIDDRLL I NI+EK+FPP KLIFD ID+LLHLIETFP KFDDAVD++PCFN+VL L
Sbjct: 61 ALSFIDDRLLAITNILEKVFPPFKLIFDKIDDLLHLIETFPSKFDDAVDEIPCFNQVLLL 120
Query: 175 EWAVTQAISLLKFTIAILMNWGRDGTREKEILVDMNYGEGRNGS----KSECCLEGTMSS 234
+W VT AISLLK I ILMNWGRD REKEILVDMNY E RNGS KS CC EG +SS
Sbjct: 121 DWTVTHAISLLKSMITILMNWGRDVAREKEILVDMNYKESRNGSESTDKSGCCSEGIVSS 180
Query: 235 VA---------------MNGTHKEVMKMETKG--------EEDDEKGTYRKSMEDKEE-- 294
++ M G++KE++KM G +E+++KGT R + DKE+
Sbjct: 181 ISETQRASMDVKMKSNPMKGSYKEILKMGINGVLKDDEDYKENEKKGT-RDEINDKEDCK 240
Query: 295 ----------------LEHEESCKKGEKNE---AKMEEPMEKAEGNEVI-PDQGYK---- 341
+E +ES KK E NE A +EE ++KA+GNE I DQ +K
Sbjct: 241 NDENGNSKEVEKGIEMMEDKESHKKDENNEIHKANLEESVDKAKGNEEIRDDQSHKRIIN 300
BLAST of Sed0017756 vs. ExPASy TrEMBL
Match:
A0A1S3BAB2 (uncharacterized protein LOC103487764 OS=Cucumis melo OX=3656 GN=LOC103487764 PE=4 SV=1)
HSP 1 Score: 309.7 bits (792), Expect = 1.5e-80
Identity = 195/345 (56.52%), Postives = 232/345 (67.25%), Query Frame = 0
Query: 55 MGSRLLPLHTCGVSFLTIAHSTCSRAQNLHGRLGSITRKIARVAKLLNPLIFVLQYQWLL 114
M SR PL TCGVSFL +AHSTCSRAQNL GRLGSITRK+ +AKL+NPLIF+L+YQ LL
Sbjct: 1 MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL 60
Query: 115 FLSFIDDRLLTIANIVEKIFPPSKLIFDNIDNLLHLIETFPRKFDDAVDKLPCFNKVLFL 174
LSFIDDRLL IANI+EKIFPP KLIFD ID+LLHLIETFP KFDDAVD++PCFN+VL L
Sbjct: 61 ALSFIDDRLLAIANILEKIFPPFKLIFDKIDDLLHLIETFPSKFDDAVDEIPCFNQVLLL 120
Query: 175 EWAVTQAISLLKFTIAILMNWGRDGTREKEILVDMNYGEGRNGS----KSECCLEGTMSS 234
+W VT AISLLK I ILMNWGRD REKEILVDMNY E RNGS KS CC EG +SS
Sbjct: 121 DWTVTHAISLLKSMITILMNWGRDVAREKEILVDMNYKESRNGSESTDKSGCCSEGIVSS 180
Query: 235 VA---------------MNGTHKEVMKMETKG--------EEDDEKGTYRKSMEDKEE-- 294
++ M G++KE++KM G +E+++KGT R + DKE+
Sbjct: 181 ISETQRASMDVKMKSNPMKGSYKEILKMGINGVLKDDEDYKENEKKGT-RDKINDKEDCK 240
Query: 295 ----------------LEHEESCKKGEKNE---AKMEEPMEKAEGNEVI-PDQGYK---- 341
+E +ES KK E NE A +EE ++KA+GNE I DQ +K
Sbjct: 241 NDENGNSKEVEKGIEMMEDKESHKKDENNEIHKANLEESVDKAKGNEEIRDDQSHKRIIN 300
BLAST of Sed0017756 vs. ExPASy TrEMBL
Match:
A0A6J1BQ09 (uncharacterized protein LOC111004599 OS=Momordica charantia OX=3673 GN=LOC111004599 PE=4 SV=1)
HSP 1 Score: 287.0 bits (733), Expect = 1.1e-73
Identity = 173/304 (56.91%), Postives = 206/304 (67.76%), Query Frame = 0
Query: 55 MGSRLLPLHTCGVSFLTIAHSTCSRAQNLHGRLGSITRKIARVAKLLNPLIFVLQYQWLL 114
M SR PL TCGVSF+ IAHS SRAQ L GRLGS TRK+ R+A ++NPLIF L YQ++L
Sbjct: 1 MSSRRCPLQTCGVSFVAIAHSAISRAQVLDGRLGSTTRKMIRLANIMNPLIFALHYQFVL 60
Query: 115 FLSFIDDRLLTIANIVEKIFPPSKLIFDNIDNLLHLIETFPRKFDDAVDKLPCFNKVLFL 174
L+FIDD L ANIVE IFPPSKL+FD ID+LL LIET P KFDDAVDKLPCFN+V L
Sbjct: 61 VLTFIDDGFLATANIVEXIFPPSKLVFDKIDDLLLLIETLPVKFDDAVDKLPCFNQVPLL 120
Query: 175 EWAVTQAISLLKFTIAILMNWGRDGTREKEILVDMNYGEGRNGSKSECCLEGTMSSVAMN 234
+WAV AISLLKF IAILMNW +DG REKEILVDMN EGRN S+S E S N
Sbjct: 121 DWAVIHAISLLKFMIAILMNWVKDGIREKEILVDMNCNEGRNASESADMDEKMKSDTTKN 180
Query: 235 GTHKEVMKMETKGEED---DEKGTYRKSMED--KEELEHEESCK-------KGEKNEAKM 294
++KEV K + +ED +EKGTY+K+ME+ KE + + CK KG K +KM
Sbjct: 181 TSYKEVQKKGVEYDEDCKENEKGTYKKAMEEGRKEAVGDKADCKNDEKKVEKGIKESSKM 240
Query: 295 EEPMEKAEGNEVIPDQGYK----GEEARVVENG--YEEEARNNGSIENQEDILKLFETAW 341
E + KAEGN I D K GE+ + E Y +E G +E ++DIL+LFETAW
Sbjct: 241 EASVGKAEGNGEIADHSNKEKSEGEDEKEEEEAMDYGKEEGKKGRMEKKDDILELFETAW 300
BLAST of Sed0017756 vs. TAIR 10
Match:
AT1G67540.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 84.7 bits (208), Expect = 1.6e-16
Identity = 66/206 (32.04%), Postives = 103/206 (50.00%), Query Frame = 0
Query: 54 RMGSRLLPLHTCGVSFLTIAHSTCSRAQNLHGRLGSITRKIARVAKLLNPLIFVLQY--- 113
R R PL TCG L++ +R+Q L + +++ + R KL +IF +
Sbjct: 6 RRRPRRRPLETCGGVILSMTRVLYTRSQTLMKKKKNLSSWLLR--KLFEFVIFFVSMTSP 65
Query: 114 ---QWLLFLSFIDDRLLTIANIVEKIFPPSKLIFDNIDNLLHLIETFPRKFDDAVDKLP- 173
+L LS DD +L + + +E FP S +F I +LL ++ET P K D + KLP
Sbjct: 66 FHRHFLAVLSVADDHILALQDAIETYFPSSSNVFVKIFDLLIIVETLPEKLDGVLKKLPS 125
Query: 174 CFNKVLFLEWAVTQAISLLKFTIAILMNWGRD---GTREKEILVDMNYGEGRNGSKSECC 233
++V +L+W + IS L + +L W RD GT EKEI VD ++ R+GS SE
Sbjct: 126 LMSRVAWLDWLLVHVISRLGLLVNVLGRW-RDKNKGTNEKEITVDRSF--SRSGSVSEEE 185
Query: 234 LEGTMSSVAMNGTHKEVMKMETKGEE 250
E ++KE ++ + GE+
Sbjct: 186 EEKRNLGTEKKVSYKEALQRGSSGED 206
BLAST of Sed0017756 vs. TAIR 10
Match:
AT1G67540.1 (unknown protein; Has 18 Blast hits to 18 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 72.8 bits (177), Expect = 6.1e-13
Identity = 58/182 (31.87%), Postives = 93/182 (51.10%), Query Frame = 0
Query: 78 SRAQNLHGRLGSITRKIARVAKLLNPLIFVLQY------QWLLFLSFIDDRLLTIANIVE 137
+R+Q L + +++ + R KL +IF + +L LS DD +L + + +E
Sbjct: 7 TRSQTLMKKKKNLSSWLLR--KLFEFVIFFVSMTSPFHRHFLAVLSVADDHILALQDAIE 66
Query: 138 KIFPPSKLIFDNIDNLLHLIETFPRKFDDAVDKLP-CFNKVLFLEWAVTQAISLLKFTIA 197
FP S +F I +LL ++ET P K D + KLP ++V +L+W + IS L +
Sbjct: 67 TYFPSSSNVFVKIFDLLIIVETLPEKLDGVLKKLPSLMSRVAWLDWLLVHVISRLGLLVN 126
Query: 198 ILMNWGRD---GTREKEILVDMNYGEGRNGSKSECCLEGTMSSVAMNGTHKEVMKMETKG 250
+L W RD GT EKEI VD ++ R+GS SE E ++KE ++ + G
Sbjct: 127 VLGRW-RDKNKGTNEKEITVDRSF--SRSGSVSEEEEEKRNLGTEKKVSYKEALQRGSSG 183
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038884034.1 | 5.1e-86 | 58.89 | myelin transcription factor 1 [Benincasa hispida] >XP_038884035.1 myelin transcr... | [more] |
XP_023538125.1 | 5.6e-85 | 62.08 | uncharacterized protein LOC111798984 [Cucurbita pepo subsp. pepo] | [more] |
XP_022951545.1 | 1.6e-84 | 62.42 | uncharacterized protein LOC111454325 [Cucurbita moschata] >XP_022951546.1 unchar... | [more] |
XP_023002168.1 | 2.8e-84 | 61.62 | uncharacterized protein LOC111496109 [Cucurbita maxima] | [more] |
KAG7020130.1 | 7.6e-82 | 57.10 | hypothetical protein SDJN02_16812, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1GHV9 | 7.9e-85 | 62.42 | uncharacterized protein LOC111454325 OS=Cucurbita moschata OX=3662 GN=LOC1114543... | [more] |
A0A6J1KSS3 | 1.3e-84 | 61.62 | uncharacterized protein LOC111496109 OS=Cucurbita maxima OX=3661 GN=LOC111496109... | [more] |
A0A5A7V3D3 | 4.1e-81 | 56.56 | Gelsolin-related protein of 125 kDa isoform X1 OS=Cucumis melo var. makuwa OX=11... | [more] |
A0A1S3BAB2 | 1.5e-80 | 56.52 | uncharacterized protein LOC103487764 OS=Cucumis melo OX=3656 GN=LOC103487764 PE=... | [more] |
A0A6J1BQ09 | 1.1e-73 | 56.91 | uncharacterized protein LOC111004599 OS=Momordica charantia OX=3673 GN=LOC111004... | [more] |
Match Name | E-value | Identity | Description | |
AT1G67540.2 | 1.6e-16 | 32.04 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
AT1G67540.1 | 6.1e-13 | 31.87 | unknown protein; Has 18 Blast hits to 18 proteins in 7 species: Archae - 0; Bact... | [more] |