Sed0017733 (gene) Chayote v1

Overview


Name	Sed0017733
Type	gene
Organism	Sechium edule (Chayote v1)
Description	S-protein homolog
Location	LG09: 1571053 .. 1571472 (+)
RNA-Seq Expression	Sed0017733
Synteny	Sed0017733

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCATTTTCAACCCTTGCACTATTAGTGTTAAGTTCATTGTTTTTCACTAGCATATATACTACCAAAGGATCAATCTTCAATCCACTGATTACTGTCAACATAACAAATGTTTTGGAAAGTCACAATGAACTCACTCTTCATTGTAAATCTGGCGATAACGATCTAGAAGTCCATCAACTACCATCTTTGGTCAGCTACGCATTCCATTTTCATCCAAACATCGTCGATACAACATTGTTCTTTTGTAGTTTCCAGTGGTCTAGTTCATTTCATTATTTCGATATCTACAAAGATATGAGAGACAGAGAGCATTGCAATAATAGTTTATGCTTGTGGATTGTGAATGAAAAAGGTCTTTGTTTGTACAACTATGGCACCATGAAATACGATATTTGCTATTTGTGGGAAGCCTAA

mRNA sequence

ATGAGTTCATTTTCAACCCTTGCACTATTAGTGTTAAGTTCATTGTTTTTCACTAGCATATATACTACCAAAGGATCAATCTTCAATCCACTGATTACTGTCAACATAACAAATGTTTTGGAAAGTCACAATGAACTCACTCTTCATTGTAAATCTGGCGATAACGATCTAGAAGTCCATCAACTACCATCTTTGGTCAGCTACGCATTCCATTTTCATCCAAACATCGTCGATACAACATTGTTCTTTTGTAGTTTCCAGTGGTCTAGTTCATTTCATTATTTCGATATCTACAAAGATATGAGAGACAGAGAGCATTGCAATAATAGTTTATGCTTGTGGATTGTGAATGAAAAAGGTCTTTGTTTGTACAACTATGGCACCATGAAATACGATATTTGCTATTTGTGGGAAGCCTAA

Coding sequence (CDS)

ATGAGTTCATTTTCAACCCTTGCACTATTAGTGTTAAGTTCATTGTTTTTCACTAGCATATATACTACCAAAGGATCAATCTTCAATCCACTGATTACTGTCAACATAACAAATGTTTTGGAAAGTCACAATGAACTCACTCTTCATTGTAAATCTGGCGATAACGATCTAGAAGTCCATCAACTACCATCTTTGGTCAGCTACGCATTCCATTTTCATCCAAACATCGTCGATACAACATTGTTCTTTTGTAGTTTCCAGTGGTCTAGTTCATTTCATTATTTCGATATCTACAAAGATATGAGAGACAGAGAGCATTGCAATAATAGTTTATGCTTGTGGATTGTGAATGAAAAAGGTCTTTGTTTGTACAACTATGGCACCATGAAATACGATATTTGCTATTTGTGGGAAGCCTAA

Protein sequence

MSSFSTLALLVLSSLFFTSIYTTKGSIFNPLITVNITNVLESHNELTLHCKSGDNDLEVHQLPSLVSYAFHFHPNIVDTTLFFCSFQWSSSFHYFDIYKDMRDREHCNNSLCLWIVNEKGLCLYNYGTMKYDICYLWEA

Homology

[Close]

BLAST of Sed0017733 vs. NCBI nr
Match: KGN61530.1 (hypothetical protein Csa_006387 [Cucumis sativus])

HSP 1 Score: 170.2 bits (430), Expect = 1.2e-38
Identity = 81/139 (58.27%), Postives = 106/139 (76.26%), Query Frame = 0


Query: 1   MSSFSTLALLVLSSLFFTSIYTTKGSIF-NPLITVNITNVLES-HNELTLHCKSGDNDLE 60
           MSSFST  L +  SL F +I+T +G  F +P +TVNITN L+  +N+LT+HCKSGD+DL 
Sbjct: 42  MSSFSTFGLSLFISLLFATIFTIEGKPFQSPPVTVNITNALKDVNNQLTIHCKSGDDDLG 101

Query: 61  VHQLPSLVSYAFHFHPNIVDTTLFFCSFQWSSSFHYFDIYKDMRDREHCNNSLCLWIVNE 120
           VHQL  L SYAF+F PN   +TLF+C+F W+ S HYF+IY+D+RDR  CN++LCLWIV E
Sbjct: 102 VHQLSHLASYAFNFRPNFWGSTLFYCAFDWTGSSHYFNIYQDLRDRAKCNDTLCLWIVGE 161

Query: 121 KGLCLYNYGTMKYDICYLW 138
           +GLC+++Y T  YDICY W
Sbjct: 162 QGLCMFDYKTNAYDICYTW 180

[Close]

BLAST of Sed0017733 vs. NCBI nr
Match: XP_022138779.1 (S-protein homolog 5 [Momordica charantia])

HSP 1 Score: 157.9 bits (398), Expect = 6.3e-35
Identity = 78/133 (58.65%), Postives = 92/133 (69.17%), Query Frame = 0


Query: 5   STLALLVLSSLFFTSIYTTKGSIFNPLITVNITNVLESHNELTLHCKSGDNDLEVHQLPS 64
           ST  +L LS L   S         +   +VNITN+LESH +LT+HCKS D+DL  HQLP 
Sbjct: 6   STSLVLSLSFLVLFSTICVNVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPP 65

Query: 65  LVSYAFHFHPNIVDTTLFFCSFQWSSSFHYFDIYKDMRDREHCNNSLCLWIVNEKGLCLY 124
           L+SYAF F PN+  +TLFFCSFQW  SFHYF+IY   RD + C  +LCLWIV EKGLCLY
Sbjct: 66  LISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDLC--TLCLWIVGEKGLCLY 125

Query: 125 NYGTMKYDICYLW 138
           N  T+KYDICY W
Sbjct: 126 NSKTLKYDICYTW 136

[Close]

BLAST of Sed0017733 vs. NCBI nr
Match: XP_008465559.1 (PREDICTED: pumilio homolog 15-like, partial [Cucumis melo])

HSP 1 Score: 154.8 bits (390), Expect = 5.3e-34
Identity = 70/119 (58.82%), Postives = 88/119 (73.95%), Query Frame = 0


Query: 20  IYTTKGSIF-NPLITVNITNVLESHNELTLHCKSGDNDLEVHQLPSLVSYAFHFHPNIVD 79
           ++T +G  F NPL+TVNITN L   ++LT+HCKSGD+DL +HQL  L  YAF F PN + 
Sbjct: 1   LFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIG 60

Query: 80  TTLFFCSFQWSSSFHYFDIYKDMRDREHCNNSLCLWIVNEKGLCLYNYGTMKYDICYLW 138
           TTLF+C+FQW    H FDIYKD RDR+ C N LCLWIV E+G+C+++Y T KYD CY W
Sbjct: 61  TTLFYCTFQWPGWSHSFDIYKDSRDRDRC-NGLCLWIVGEQGVCMFHYVTKKYDFCYTW 118

[Close]

BLAST of Sed0017733 vs. NCBI nr
Match: XP_008460739.1 (PREDICTED: uncharacterized protein LOC103499501 [Cucumis melo])

HSP 1 Score: 154.5 bits (389), Expect = 6.9e-34
Identity = 67/107 (62.62%), Postives = 82/107 (76.64%), Query Frame = 0


Query: 32  ITVNITNVLES-HNELTLHCKSGDNDLEVHQLPSLVSYAFHFHPNIVDTTLFFCSFQWSS 91
           +TVNITN +   +N+LT+HCKSGD+DL VH+LP LVSY F F PN   +TLF+C FQWSS
Sbjct: 1   MTVNITNEISGVNNQLTVHCKSGDDDLGVHKLPHLVSYTFTFRPNFWGSTLFYCKFQWSS 60

Query: 92  SFHYFDIYKDMRDREHCNNSLCLWIVNEKGLCLYNYGTMKYDICYLW 138
             HYFDIYKD RD   CN +LCLWI++EKG+C++NY T  YD CY W
Sbjct: 61  WLHYFDIYKDSRDNLRCNQTLCLWIISEKGICMFNYDTKNYDYCYAW 107

[Close]

BLAST of Sed0017733 vs. NCBI nr
Match: XP_023522352.1 (S-protein homolog 5-like, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 151.8 bits (382), Expect = 4.5e-33
Identity = 76/121 (62.81%), Postives = 94/121 (77.69%), Query Frame = 0


Query: 1   MSSFSTLALLVLSSLFFTSIYTT-KGSIF-NPLITVNITNVLESHNELTLHCKSGDNDLE 60
           M+SFSTLA  +L SLFFT+++TT  GSIF +P +TVNITNVL+SHN+L + CKS D+DL 
Sbjct: 30  MNSFSTLAFALLMSLFFTTLFTTIDGSIFKDPPMTVNITNVLKSHNQLAVRCKSSDDDLR 89

Query: 61  VHQLPSLVSYAFHFHPNIVDTTLFFCSFQWSSSFHYFDIYKDMRDREHCNNSLCLWIVNE 120
           +HQLP L  YAF F PN   +T F+C+F+WS   HYFDIYKD RDR  CNN+LCLWIV E
Sbjct: 90  IHQLPPLGGYAFTFQPNFWGSTQFYCTFEWSGFSHYFDIYKDNRDRTKCNNTLCLWIVGE 149

[Close]

BLAST of Sed0017733 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-16
Identity = 44/108 (40.74%), Postives = 57/108 (52.78%), Query Frame = 0


Query: 33  TVNITNVLESHNELTLHCKSGDNDLEVHQLPSLVSYAFHFHPNIVDTTLFFCSFQWSSSF 92
           TV I N L +   L  HCKS D+DL    L    S++F F       TL+FCSF W +  
Sbjct: 49  TVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNES 108

Query: 93  HYFDIYKDMRDR---EHCNNSLCLWIVNEKGLCLYNYGTMKYDICYLW 138
           H FDIYKD RD      C +  C+W +   G C +N  T ++D+CY W
Sbjct: 109 HSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of Sed0017733 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 9.8e-15
Identity = 47/133 (35.34%), Postives = 71/133 (53.38%), Query Frame = 0


Query: 7   LALLVLSSLFFTSIYTTKGSIFNPLITVNITNVLESHNELTLHCKSGDNDLEVHQLPSLV 66
           + + +L  + F+ + T     ++    V ITN L     L LHCKS D+DL +  L    
Sbjct: 12  VVIYLLIKIAFSQVKTDFDVNWSTSKMVRITNRLGDGLTLNLHCKSADDDLGLKILAPNG 71

Query: 67  SYAFHFHPNIVDTTLFFCSFQWSSSFHYFDIYKDMRD--REHCNNSLCLWIVNEKGLCLY 126
           S++F F  +IV TTLF+C F W      FDIY D RD  R H +   C+W ++ +G C++
Sbjct: 72  SWSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGVRSHISCINCIWDISIQGPCMF 131

Query: 127 NYGTMKYDICYLW 138
           +     ++ICY W
Sbjct: 132 SESDHAFNICYDW 144

[Close]

BLAST of Sed0017733 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.2e-14
Identity = 43/105 (40.95%), Postives = 58/105 (55.24%), Query Frame = 0


Query: 34  VNITNVLESHNELTLHCKSGDNDLEVHQLPSLVSYAFHFHPNIVDTTLFFCSFQWSSSFH 93
           V +TN++     LT+HCKS  +DL +H +P    Y F F PN+  +TLFFCSFQW S F 
Sbjct: 31  VTMTNLI-GGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQFK 90

Query: 94  YFDIYKDMRDREHCNNSLCLWIVNEKGLCLYNYGTMKYDICYLWE 139
            FDIY   RD+  C++  C W +   G C       K   C+ W+
Sbjct: 91  SFDIYDAQRDQGICDD--CQWEIKPDGPCRLG----KKAKCFPWK 128

[Close]

BLAST of Sed0017733 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 6.3e-14
Identity = 46/135 (34.07%), Postives = 70/135 (51.85%), Query Frame = 0


Query: 5   STLALLVLSSLFFTSIYTTKGSIFNPL--ITVNITNVLESHNELTLHCKSGDNDLEVHQL 64
           S+   +VLS + F  I +  G  +NP     V +TN +     LT+ C+S D+DL  H L
Sbjct: 4   SSKIFVVLSIILFYVISSCHG--YNPFAKTVVTVTNNISPQTTLTISCRSKDDDLGEHLL 63

Query: 65  PSLVSYAFHFHPNIVDTTLFFCSFQWSSSFHYFDIYKDMRDREHCNNSLCLWIVNEKGLC 124
               ++ + F P+   TTLF C F W+++  +FD Y+  RD+ HC +  C W +N    C
Sbjct: 64  LHGQAFLWKFRPSWFRTTLFTCKFLWNNNVKWFDTYRSDRDQGHCYS--CNWSINADSAC 123

Query: 125 LYNYGTMKYDICYLW 138
           +      K+D CY W
Sbjct: 124 ISGNFNKKFDRCYPW 134

[Close]

BLAST of Sed0017733 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-12
Identity = 43/107 (40.19%), Postives = 58/107 (54.21%), Query Frame = 0


Query: 34  VNITNVLESHNELTLHCKSGDNDLEVHQLPSLVSYAFHFHPNIV-DTTLFFCSFQWSSSF 93
           V ITN L   + L LHCKS D+DL +  L    S++F F P+IV   TLFFC F W    
Sbjct: 40  VTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWPGQS 99

Query: 94  HYFDIYKDMRD--REHCNNSLCLWIVNEKGLCLYNYGTMKYDICYLW 138
            +F+IY D RD  R       C+W + + G C ++     ++ICY W
Sbjct: 100 KWFNIYDDDRDGVRMGIPCIYCIWDIGKYGPCRFSEIDDAFNICYDW 146

[Close]

BLAST of Sed0017733 vs. ExPASy TrEMBL
Match: A0A0A0LI28 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_2G162130 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 5.9e-39
Identity = 81/139 (58.27%), Postives = 106/139 (76.26%), Query Frame = 0


Query: 1   MSSFSTLALLVLSSLFFTSIYTTKGSIF-NPLITVNITNVLES-HNELTLHCKSGDNDLE 60
           MSSFST  L +  SL F +I+T +G  F +P +TVNITN L+  +N+LT+HCKSGD+DL 
Sbjct: 42  MSSFSTFGLSLFISLLFATIFTIEGKPFQSPPVTVNITNALKDVNNQLTIHCKSGDDDLG 101

Query: 61  VHQLPSLVSYAFHFHPNIVDTTLFFCSFQWSSSFHYFDIYKDMRDREHCNNSLCLWIVNE 120
           VHQL  L SYAF+F PN   +TLF+C+F W+ S HYF+IY+D+RDR  CN++LCLWIV E
Sbjct: 102 VHQLSHLASYAFNFRPNFWGSTLFYCAFDWTGSSHYFNIYQDLRDRAKCNDTLCLWIVGE 161

Query: 121 KGLCLYNYGTMKYDICYLW 138
           +GLC+++Y T  YDICY W
Sbjct: 162 QGLCMFDYKTNAYDICYTW 180

[Close]

BLAST of Sed0017733 vs. ExPASy TrEMBL
Match: A0A6J1CB24 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111009858 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 3.0e-35
Identity = 78/133 (58.65%), Postives = 92/133 (69.17%), Query Frame = 0


Query: 5   STLALLVLSSLFFTSIYTTKGSIFNPLITVNITNVLESHNELTLHCKSGDNDLEVHQLPS 64
           ST  +L LS L   S         +   +VNITN+LESH +LT+HCKS D+DL  HQLP 
Sbjct: 6   STSLVLSLSFLVLFSTICVNVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPP 65

Query: 65  LVSYAFHFHPNIVDTTLFFCSFQWSSSFHYFDIYKDMRDREHCNNSLCLWIVNEKGLCLY 124
           L+SYAF F PN+  +TLFFCSFQW  SFHYF+IY   RD + C  +LCLWIV EKGLCLY
Sbjct: 66  LISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDLC--TLCLWIVGEKGLCLY 125

Query: 125 NYGTMKYDICYLW 138
           N  T+KYDICY W
Sbjct: 126 NSKTLKYDICYTW 136

[Close]

BLAST of Sed0017733 vs. ExPASy TrEMBL
Match: A0A1S3CP53 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103503190 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.6e-34
Identity = 70/119 (58.82%), Postives = 88/119 (73.95%), Query Frame = 0


Query: 20  IYTTKGSIF-NPLITVNITNVLESHNELTLHCKSGDNDLEVHQLPSLVSYAFHFHPNIVD 79
           ++T +G  F NPL+TVNITN L   ++LT+HCKSGD+DL +HQL  L  YAF F PN + 
Sbjct: 1   LFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIG 60

Query: 80  TTLFFCSFQWSSSFHYFDIYKDMRDREHCNNSLCLWIVNEKGLCLYNYGTMKYDICYLW 138
           TTLF+C+FQW    H FDIYKD RDR+ C N LCLWIV E+G+C+++Y T KYD CY W
Sbjct: 61  TTLFYCTFQWPGWSHSFDIYKDSRDRDRC-NGLCLWIVGEQGVCMFHYVTKKYDFCYTW 118

[Close]

BLAST of Sed0017733 vs. ExPASy TrEMBL
Match: A0A1S3CDK4 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103499501 PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 3.4e-34
Identity = 67/107 (62.62%), Postives = 82/107 (76.64%), Query Frame = 0


Query: 32  ITVNITNVLES-HNELTLHCKSGDNDLEVHQLPSLVSYAFHFHPNIVDTTLFFCSFQWSS 91
           +TVNITN +   +N+LT+HCKSGD+DL VH+LP LVSY F F PN   +TLF+C FQWSS
Sbjct: 1   MTVNITNEISGVNNQLTVHCKSGDDDLGVHKLPHLVSYTFTFRPNFWGSTLFYCKFQWSS 60

Query: 92  SFHYFDIYKDMRDREHCNNSLCLWIVNEKGLCLYNYGTMKYDICYLW 138
             HYFDIYKD RD   CN +LCLWI++EKG+C++NY T  YD CY W
Sbjct: 61  WLHYFDIYKDSRDNLRCNQTLCLWIISEKGICMFNYDTKNYDYCYAW 107

[Close]

BLAST of Sed0017733 vs. ExPASy TrEMBL
Match: A0A6J1IDA7 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111474089 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 7.7e-31
Identity = 71/110 (64.55%), Postives = 85/110 (77.27%), Query Frame = 0


Query: 14  SLFFTSIYTT-KGSIF-NPLITVNITNVLESHNELTLHCKSGDNDLEVHQLPSLVSYAFH 73
           SL FT+++TT  GSIF +P ITVNITNVLESHN+LT+HCKSGD+DL +HQLP L  YAF 
Sbjct: 2   SLSFTTLFTTIDGSIFKDPPITVNITNVLESHNQLTVHCKSGDDDLGIHQLPYLGGYAFT 61

Query: 74  FHPNIVDTTLFFCSFQWSSSFHYFDIYKDMRDREHCNNSLCLWIVNEKGL 122
           F PN   TT F+C+FQW     YFDIYKD RDR  CN +LCLWIV ++G+
Sbjct: 62  FRPNFWGTTQFYCTFQWPGFSQYFDIYKDYRDRIKCNKTLCLWIVGKQGI 111

[Close]

BLAST of Sed0017733 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 87.4 bits (215), Expect = 9.7e-18
Identity = 44/108 (40.74%), Postives = 57/108 (52.78%), Query Frame = 0


Query: 33  TVNITNVLESHNELTLHCKSGDNDLEVHQLPSLVSYAFHFHPNIVDTTLFFCSFQWSSSF 92
           TV I N L +   L  HCKS D+DL    L    S++F F       TL+FCSF W +  
Sbjct: 49  TVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNES 108

Query: 93  HYFDIYKDMRDR---EHCNNSLCLWIVNEKGLCLYNYGTMKYDICYLW 138
           H FDIYKD RD      C +  C+W +   G C +N  T ++D+CY W
Sbjct: 109 HSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of Sed0017733 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 86.3 bits (212), Expect = 2.2e-17
Identity = 43/113 (38.05%), Postives = 58/113 (51.33%), Query Frame = 0


Query: 29  NPLITVNITNVLESHNELTLHCKSGDNDLEVHQLPSLVSYAFHFHPNIVDTTLFFCSFQW 88
           NP  TV I N L  H  L  HCKS ++DL    +    +++F F P++   TLFFC F W
Sbjct: 25  NPRTTVVIYNDLGGHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSVFGGTLFFCGFIW 84

Query: 89  SSSFHYFDIYKDMRDREHCNNSL--CLWIVNEKGLCLYNYGTMKYDICYLWEA 140
               H+FDIYK  RDRE        C W + + G C  N  +  +D+C  W +
Sbjct: 85  DKELHWFDIYKQSRDREFAEFGCRRCEWKIRKDGPCKLNKNSNMFDVCLPWNS 137

[Close]

BLAST of Sed0017733 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 81.3 bits (199), Expect = 6.9e-16
Identity = 47/133 (35.34%), Postives = 71/133 (53.38%), Query Frame = 0


Query: 7   LALLVLSSLFFTSIYTTKGSIFNPLITVNITNVLESHNELTLHCKSGDNDLEVHQLPSLV 66
           + + +L  + F+ + T     ++    V ITN L     L LHCKS D+DL +  L    
Sbjct: 12  VVIYLLIKIAFSQVKTDFDVNWSTSKMVRITNRLGDGLTLNLHCKSADDDLGLKILAPNG 71

Query: 67  SYAFHFHPNIVDTTLFFCSFQWSSSFHYFDIYKDMRD--REHCNNSLCLWIVNEKGLCLY 126
           S++F F  +IV TTLF+C F W      FDIY D RD  R H +   C+W ++ +G C++
Sbjct: 72  SWSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGVRSHISCINCIWDISIQGPCMF 131

Query: 127 NYGTMKYDICYLW 138
           +     ++ICY W
Sbjct: 132 SESDHAFNICYDW 144

[Close]

BLAST of Sed0017733 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 80.1 bits (196), Expect = 1.5e-15
Identity = 43/105 (40.95%), Postives = 58/105 (55.24%), Query Frame = 0


Query: 34  VNITNVLESHNELTLHCKSGDNDLEVHQLPSLVSYAFHFHPNIVDTTLFFCSFQWSSSFH 93
           V +TN++     LT+HCKS  +DL +H +P    Y F F PN+  +TLFFCSFQW S F 
Sbjct: 31  VTMTNLI-GGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQFK 90

Query: 94  YFDIYKDMRDREHCNNSLCLWIVNEKGLCLYNYGTMKYDICYLWE 139
            FDIY   RD+  C++  C W +   G C       K   C+ W+
Sbjct: 91  SFDIYDAQRDQGICDD--CQWEIKPDGPCRLG----KKAKCFPWK 128

[Close]

BLAST of Sed0017733 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 74.3 bits (181), Expect = 8.5e-14
Identity = 47/140 (33.57%), Postives = 67/140 (47.86%), Query Frame = 0


Query: 1   MSSFSTLALLVLSSLFFTSIYTTKGSIFNPLITVNITNVLESHNELTLHCKSGDNDLEVH 60
           M S  T  L  +  +F ++I +   +      +V I N L     L  HCKS ++DL   
Sbjct: 1   MGSLETCLLFFVMVMFMSAIMSRAST------SVVIYNDLGGGLPLRHHCKSREDDLGYQ 60

Query: 61  QLPSLVSYAFHFHPNIVDTTLFFCSFQWSSSFHYFDIYKDMRDRE--HCNNSLCLWIVNE 120
            L    S++F F P+I   TLF+C F W +  H FDIYK  RD+E        C W + +
Sbjct: 61  SLAPGRSWSFGFTPDIFGRTLFYCRFSWGAESHIFDIYKQSRDKEFQEFGCKKCEWKIRK 120

Query: 121 KGLCLYNYGTMKYDICYLWE 139
            G C +   T  +D CY W+
Sbjct: 121 NGPCKFYKKTGMFDHCYSWD 134

The following BLAST results are available for this feature:

BLAST of Sed0017733 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61530.1	1.2e-38	58.27	hypothetical protein Csa_006387 [Cucumis sativus]	[more]
XP_022138779.1	6.3e-35	58.65	S-protein homolog 5 [Momordica charantia]	[more]
XP_008465559.1	5.3e-34	58.82	PREDICTED: pumilio homolog 15-like, partial [Cucumis melo]	[more]
XP_008460739.1	6.9e-34	62.62	PREDICTED: uncharacterized protein LOC103499501 [Cucumis melo]	[more]
XP_023522352.1	4.5e-33	62.81	S-protein homolog 5-like, partial [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0017733 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLQ5	1.4e-16	40.74	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
Q9FMQ4	9.8e-15	35.34	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]
O23020	2.2e-14	40.95	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]
P0DN93	6.3e-14	34.07	S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1	[more]
F4JZG1	1.2e-12	40.19	S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1	[more]

BLAST of Sed0017733 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LI28	5.9e-39	58.27	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_2G162130 PE=3 SV=1	[more]
A0A6J1CB24	3.0e-35	58.65	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111009858 PE=3 SV=1	[more]
A0A1S3CP53	2.6e-34	58.82	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103503190 PE=3 SV=1	[more]
A0A1S3CDK4	3.4e-34	62.62	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103499501 PE=3 SV=1	[more]
A0A6J1IDA7	7.7e-31	64.55	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111474089 PE=3 SV=1	[more]

BLAST of Sed0017733 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16195.1	9.7e-18	40.74	Plant self-incompatibility protein S1 family	[more]
AT3G16970.1	2.2e-17	38.05	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	6.9e-16	35.34	Plant self-incompatibility protein S1 family	[more]
AT1G04645.1	1.5e-15	40.95	Plant self-incompatibility protein S1 family	[more]
AT3G17080.1	8.5e-14	33.57	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 33..137 e-value: 3.1E-28 score: 98.3
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 8..137
None	No IPR available	PANTHER	PTHR31232:SF76	S-PROTEIN HOMOLOG 2	coord: 8..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017733.1	Sed0017733.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane