Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAGGATTCGATTTGCAAACGATGCCACAAGCTGGCAGAGACAACTTTTCATGCTATTTGGGCGTGCAAACATGCACAAGACTCTTGGAGGGGTTCTCCGTTTCTGCACTATGGGTTTCCAAACCATGTTACAGAGGTGGCAGACTTATTTTGTTGGTTTTATGGAAAGCTTCGGTCAAAACAAATGCAAAAATTCATGATCATGTGTTGGAGGAATTGGAACTGCAGAAACATGGAAGTCAATGAGGTTTTTAAGCCTAGTGATGCTACTGATCAAAAGACATTTTATTTGCCTGCTTATGATTGGGATTATTGTAAGCAAATCTTCTTGATTTTCAGTCAGCAAACAACTTTTTGACTCATATATAGGACGAAGAAGCCCAAAGTACTTGATAAGTTGAAGCCCCTAGACGCAGTAAATTTTAAAATTAATGTTGATGCAGCAATTAATTCAGAGGATCGTCGAAGCGTGCTTGGGATGGTGATGCGAAATTGGAAGGGGGAGGCCATGGCTTCTTATTGTTGTCAGATTCCAGGGATTATAGATTCTGAGATAGCGAAGGCAATGGCAGTACGTCATGGCATGGACCTTGCGATGGATCTCGGATTTCAAAGAATTGAAATGGAGACGGATGCTTTGCATGTGGTAAATCTTCTCAACAACGAAATGCATTGTCGATCGAAAGTTGGAAGGCTTGTCGAAGAGATAAAAAGCTTAGCGAGAAACTTCTTGTTCGTGAGCTTTGGGTGGTGTGGACGAGATGCGAATTCTATTGCTCACAAGTTAGCTAAGATGAGAGCTTTTGAGAATGAGGAACAATTCTGGATGGAAGAAGTTCCAGAAATGTGCATAAGAGATTATTTGTGCGAGTTGGTGAAGGATTTCCGTCGAAGGGTGTGTGACGGACTTCAACTTTAA
mRNA sequence
ATGGAAGAGGATTCGATTTGCAAACGATGCCACAAGCTGGCAGAGACAACTTTTCATGCTATTTGGGCGTGCAAACATGCACAAGACTCTTGGAGGGGTTCTCCGTTTCTGCACTATGGGTTTCCAAACCATGTTACAGAGGTGGCAGACTTATTTTGTTGGTTTTATGGAAAGCTTCGGTCAAAACAAATGCAAAAATTCATGATCATGTGTTGGAGGAATTGGAACTGCAGAAACATGGAAGTCAATGAGGTTTTTAAGCCTAGTGATGCTACTGATCAAAAGACATTTTATTTGCCTGCTTATGATTGGGATTATTTACTTGATAAGTTGAAGCCCCTAGACGCAGTAAATTTTAAAATTAATGTTGATGCAGCAATTAATTCAGAGGATCGTCGAAGCGTGCTTGGGATGGTGATGCGAAATTGGAAGGGGGAGGCCATGGCTTCTTATTGTTGTCAGATTCCAGGGATTATAGATTCTGAGATAGCGAAGGCAATGGCAGTACGTCATGGCATGGACCTTGCGATGGATCTCGGATTTCAAAGAATTGAAATGGAGACGGATGCTTTGCATGTGGTAAATCTTCTCAACAACGAAATGCATTGTCGATCGAAAGTTGGAAGGCTTGTCGAAGAGATAAAAAGCTTAGCGAGAAACTTCTTGTTCGTGAGCTTTGGGTGGTGTGGACGAGATGCGAATTCTATTGCTCACAAGTTAGCTAAGATGAGAGCTTTTGAGAATGAGGAACAATTCTGGATGGAAGAAGTTCCAGAAATGTGCATAAGAGATTATTTGTGCGAGTTGGTGAAGGATTTCCGTCGAAGGGTGTGTGACGGACTTCAACTTTAA
Coding sequence (CDS)
ATGGAAGAGGATTCGATTTGCAAACGATGCCACAAGCTGGCAGAGACAACTTTTCATGCTATTTGGGCGTGCAAACATGCACAAGACTCTTGGAGGGGTTCTCCGTTTCTGCACTATGGGTTTCCAAACCATGTTACAGAGGTGGCAGACTTATTTTGTTGGTTTTATGGAAAGCTTCGGTCAAAACAAATGCAAAAATTCATGATCATGTGTTGGAGGAATTGGAACTGCAGAAACATGGAAGTCAATGAGGTTTTTAAGCCTAGTGATGCTACTGATCAAAAGACATTTTATTTGCCTGCTTATGATTGGGATTATTTACTTGATAAGTTGAAGCCCCTAGACGCAGTAAATTTTAAAATTAATGTTGATGCAGCAATTAATTCAGAGGATCGTCGAAGCGTGCTTGGGATGGTGATGCGAAATTGGAAGGGGGAGGCCATGGCTTCTTATTGTTGTCAGATTCCAGGGATTATAGATTCTGAGATAGCGAAGGCAATGGCAGTACGTCATGGCATGGACCTTGCGATGGATCTCGGATTTCAAAGAATTGAAATGGAGACGGATGCTTTGCATGTGGTAAATCTTCTCAACAACGAAATGCATTGTCGATCGAAAGTTGGAAGGCTTGTCGAAGAGATAAAAAGCTTAGCGAGAAACTTCTTGTTCGTGAGCTTTGGGTGGTGTGGACGAGATGCGAATTCTATTGCTCACAAGTTAGCTAAGATGAGAGCTTTTGAGAATGAGGAACAATTCTGGATGGAAGAAGTTCCAGAAATGTGCATAAGAGATTATTTGTGCGAGTTGGTGAAGGATTTCCGTCGAAGGGTGTGTGACGGACTTCAACTTTAA
Protein sequence
MEEDSICKRCHKLAETTFHAIWACKHAQDSWRGSPFLHYGFPNHVTEVADLFCWFYGKLRSKQMQKFMIMCWRNWNCRNMEVNEVFKPSDATDQKTFYLPAYDWDYLLDKLKPLDAVNFKINVDAAINSEDRRSVLGMVMRNWKGEAMASYCCQIPGIIDSEIAKAMAVRHGMDLAMDLGFQRIEMETDALHVVNLLNNEMHCRSKVGRLVEEIKSLARNFLFVSFGWCGRDANSIAHKLAKMRAFENEEQFWMEEVPEMCIRDYLCELVKDFRRRVCDGLQL
Homology
BLAST of Sed0017704 vs. NCBI nr
Match:
XP_023904177.1 (uncharacterized protein LOC112015942 [Quercus suber])
HSP 1 Score: 144.1 bits (362), Expect = 1.9e-30
Identity = 85/272 (31.25%), Postives = 131/272 (48.16%), Query Frame = 0
Query: 4 DSICKRCHKLAETTFHAIWACKHAQDSWRGSPFLHYGFPNHVTEVADLFCWFYGKLRSKQ 63
++ C C + E H IW C AQD W GS P ++ LF + +L +
Sbjct: 230 ETFCPICLQSPENEMHVIWECPVAQDVWAGSRIKLQKCPLGQPDMVQLFLYLLHRLEPED 289
Query: 64 MQKFMIMCWRNWNCRN--MEVNEVFKPSDATDQKTFYLPAY-DWDYLLDKLKPLDAVN-- 123
M F++ W W+ RN + ++ +P + +L + LD L+P V
Sbjct: 290 MALFLVQAWMLWSQRNSVLHGGKLKEPGWLNKRDVEWLEEFAQVQDQLDVLQPRATVGNV 349
Query: 124 --------FKINVDAAINSEDRRSVLGMVMRNWKGEAMASYCCQIPGIIDSEIAKAMAVR 183
FK+N DAAI ++ RS G V+RN GE MA+ P + S+ A+ +A R
Sbjct: 350 WRPPAHPFFKMNFDAAIFNDSGRSGFGAVIRNELGEVMAALSAIGPSVSSSDEAETLACR 409
Query: 184 HGMDLAMDLGFQRIEMETDALHVVNLLNNEMHCRSKVGRLVEEIKSLARNFLFVSFGWCG 243
M+ A+D GF + +E D+++V+ L++ S VG +V +IK L VSF W
Sbjct: 410 KAMEFAVDAGFNELIIEGDSINVIKALSSSSPDLSVVGNVVADIKCLISGLRRVSFSWVN 469
Query: 244 RDANSIAHKLAKMRAFENEEQFWMEEVPEMCI 263
RD N +AH LAK E+ +WME+ P + +
Sbjct: 470 RDCNRVAHALAKFANSLEEDLYWMEDAPPVAL 501
BLAST of Sed0017704 vs. NCBI nr
Match:
XP_030931246.1 (uncharacterized protein LOC115957168 [Quercus lobata])
HSP 1 Score: 134.0 bits (336), Expect = 2.0e-27
Identity = 81/269 (30.11%), Postives = 128/269 (47.58%), Query Frame = 0
Query: 3 EDSICKRCHKLAETTFHAIWACKHAQDSWRGSPFLHYGFPNHVTEVADLFCWFYGKLRSK 62
EDS C C +ET H +W C AQD W GS + + V +L KL +
Sbjct: 1039 EDSTCVLCKCTSETELHVLWECGVAQDIWAGSMRKLQKGHDFLQLVEELML----KLSRE 1098
Query: 63 QMQKFMIMCWRNWNCRNMEV--NEVFKPSDATDQKTFYLPAYDWDYLLDKLKPLDA---- 122
+++ F + W W RN + PS + YL + + + + A
Sbjct: 1099 ELELFFVQAWLIWTQRNTVTFGGVIQDPSRLVKRAGEYLEEFKMSQVQLAMSTVSARSSR 1158
Query: 123 ------VNFKINVDAAINSEDRRSVLGMVMRNWKGEAMASYCCQIPGIIDSEIAKAMAVR 182
+++K+N DAAI + S G+V+RN GE MA++ + P I DSE A+ +A R
Sbjct: 1159 WIPPPGLSYKLNFDAAIFQDGEASGFGVVIRNNGGEVMAAFSARGPAISDSEEAEVLACR 1218
Query: 183 HGMDLAMDLGFQRIEMETDALHVVNLLNNEMHCRSKVGRLVEEIKSLARNFLFVSFGWCG 242
++ A D GF + +E D V+N++++ +S++G L ++ LA +S
Sbjct: 1219 KALEFAADSGFTELILEGDNSVVMNVISSSRMFQSRLGHLYSDVNCLATGLPVLSLSCVA 1278
Query: 243 RDANSIAHKLAKMRAFENEEQFWMEEVPE 260
R ANS+AH LA+ NE+ W EE P+
Sbjct: 1279 RSANSVAHSLARFAQCINEDMIWPEESPQ 1303
BLAST of Sed0017704 vs. NCBI nr
Match:
XP_023876296.1 (uncharacterized protein LOC111988743 [Quercus suber])
HSP 1 Score: 132.9 bits (333), Expect = 4.4e-27
Identity = 86/269 (31.97%), Postives = 137/269 (50.93%), Query Frame = 0
Query: 3 EDSICKRCHKLAETTFHAIWACKHAQDSWRGSPFLHYGFPNHVTEVADLFCWFYGKLRSK 62
+D C C + AET HA+W C A+D W GS + + +V LF +L +
Sbjct: 114 DDDACTLCLREAETGVHALWDCAVARDVWAGSLTRLQKWSSGQHDVLQLFHELLIRLTTD 173
Query: 63 QMQKFMIMCWRNWNCRNMEVN--EVFKPSDATDQKTFYLPAY-----DWDYLLDKLK--- 122
+ + F++ W WN RN V+ ++ P + YL + + LL +L
Sbjct: 174 EFELFLVQAWLIWNQRNTVVHRGKMRDPRWLNKRAREYLSEFQQSQDQLNILLPRLNANI 233
Query: 123 ---PLDAVNFKINVDAAINSEDRRSVLGMVMRNWKGEAMASYCCQIPGIIDSEIAKAMAV 182
P D V +K+N DAAI E S +G ++RN KGE MA+ + P + DSE A+ +A
Sbjct: 234 WVAPTDPV-YKLNFDAAIFKELNCSGIGAIIRNGKGEVMAAMSAKGPLVEDSEEAETLAC 293
Query: 183 RHGMDLAMDLGFQRIEMETDALHVVNLLNNEMHCRSKVGRLVEEIKSLARNFLFVSFGWC 242
R ++ A+D GF + +E D V+ L++ S++G +V++++ LA +VSF
Sbjct: 294 RKAVEFAIDAGFSELVIEGDNAAVMASLSHGGPDLSRLGHVVQDVQWLATGLRWVSFSHV 353
Query: 243 GRDANSIAHKLAKMRAFENEEQFWMEEVP 259
R AN++AH LA+ E+ W+EE P
Sbjct: 354 KRCANTVAHGLARHAKNVMEDMIWLEETP 381
BLAST of Sed0017704 vs. NCBI nr
Match:
XP_023928118.1 (uncharacterized protein LOC112039474 [Quercus suber])
HSP 1 Score: 131.7 bits (330), Expect = 9.8e-27
Identity = 84/268 (31.34%), Postives = 130/268 (48.51%), Query Frame = 0
Query: 3 EDSICKRCHKLAETTFHAIWACKHAQDSWRGSPFLHYGFPNHVTEVADLFCWFYGKLRSK 62
E+ +C C + AE HA+W C A+D W GS +V LF GKL
Sbjct: 34 ENDVCVLCSREAEIGVHALWECVVAKDVWSGSMIRIQKCGQGQQDVLHLFQELLGKLSIN 93
Query: 63 QMQKFMIMCWRNWNCRNMEV--NEVFKPSDATDQKTFYLPAYDW---------DYLLDKL 122
+ + F+I W WN RN V ++ P +L + L D +
Sbjct: 94 EFELFVIQSWIIWNQRNTVVFGGKLKDPKWLNKWAKEFLDEFHQAQGQLRIPVSCLGDSV 153
Query: 123 -KPLDAVNFKINVDAAINSEDRRSVLGMVMRNWKGEAMASYCCQIPGIIDSEIAKAMAVR 182
+P FK+N DA + S+ S +G ++RN GE MA+ ++P ++DS +A+ +A R
Sbjct: 154 WRPPPDSTFKLNFDAVVFSKLSCSGVGAMIRNENGEVMATMLARVPHVVDSVVAEVIACR 213
Query: 183 HGMDLAMDLGFQRIEMETDALHVVNLLNNEMHCRSKVGRLVEEIKSLARNFLFVSFGWCG 242
M A GF + +E D L V+ L S +G ++++IK L R+F VSF +
Sbjct: 214 RAMKFACKAGFTDLVVEGDNLSVMKSLTTSETDLSWLGHIIQDIKWLTRSFRRVSFSYVR 273
Query: 243 RDANSIAHKLAKMRAFENEEQFWMEEVP 259
R ANS+A+ LA+ +E+ +WME+ P
Sbjct: 274 RAANSVAYGLARYAKDIHEDMYWMEDNP 301
BLAST of Sed0017704 vs. NCBI nr
Match:
XP_030941688.1 (uncharacterized protein LOC115966628 [Quercus lobata])
HSP 1 Score: 130.6 bits (327), Expect = 2.2e-26
Identity = 77/270 (28.52%), Postives = 130/270 (48.15%), Query Frame = 0
Query: 3 EDSICKRCHKLAETTFHAIWACKHAQDSWRGSPFLHYGFPNHVTEVADLFCWFYGKLRSK 62
ED C+ C ET HA+W C AQD W GS +V LF +L +
Sbjct: 901 EDEHCEVCKTALETGIHALWECPVAQDVWSGSLVRLQKCTQGYDDVLQLFGELLNRLSRE 960
Query: 63 QMQKFMIMCWRNWNCRNMEVN--EVFKPSDATDQKTFYLPAY----------DWDYLLDK 122
+ + F+ + W WN RN ++ ++ P + YL Y + +
Sbjct: 961 EFELFLTLSWVIWNQRNAVIHGGKIKDPGQLCKRAEVYLLEYRQAQDQLSIPSRQQSVTQ 1020
Query: 123 LKPLDAVNFKINVDAAINSEDRRSVLGMVMRNWKGEAMASYCCQIPGIIDSEIAKAMAVR 182
+P +K+N DAAI +E S G ++RN +GE MA+ + P + +SE A+A+A R
Sbjct: 1021 WQPPPIDRYKLNFDAAIFTELGCSGFGAIVRNERGEVMAALSVKGPLVWNSEEAEALACR 1080
Query: 183 HGMDLAMDLGFQRIEMETDALHVVNLLNNEMHCRSKVGRLVEEIKSLARNFLFVSFGWCG 242
++ A+ GF + +E D ++V+ + + +S++G + ++I+ L + S
Sbjct: 1081 RAVEFAIHAGFAELMIEGDNVNVMKAVCSNSMDKSRLGHVFQDIQCLVHGLRWSSVSCVK 1140
Query: 243 RDANSIAHKLAKMRAFENEEQFWMEEVPEM 261
R AN +AH LA+ + +EE W+EE P +
Sbjct: 1141 RGANGVAHSLARFARYVSEETIWLEECPPL 1170
BLAST of Sed0017704 vs. ExPASy TrEMBL
Match:
A0A2N9ED81 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS466 PE=4 SV=1)
HSP 1 Score: 136.0 bits (341), Expect = 2.5e-28
Identity = 84/273 (30.77%), Postives = 126/273 (46.15%), Query Frame = 0
Query: 4 DSICKRCHKLAETTFHAIWACKHAQDSWRGSPFLHYGFPNHVTEVADLFCWFYGKLRSKQ 63
D C C+++ ET HA+W CK ++ W P+ N +LF + L + +
Sbjct: 437 DPRCANCNEVNETVLHALWQCKQIREIWIAVPWSSSMLQNQYLNFMELFHHCHATLPATE 496
Query: 64 MQKFMIMCWRNWNCRNME--------VNEV----------FKPSDATDQKTFYLPAYDWD 123
+Q F W W+ RN + VN++ F + + T PA
Sbjct: 497 LQLFATTTWLIWHQRNRQWLNQQPVPVNQLMIHAQQFLSEFLAAQVSHSSTTGPPAPPIK 556
Query: 124 YLLDKLKPLDAVNFKINVDAAINSEDRRSVLGMVMRNWKGEAMASYCCQIPGIIDSEIAK 183
+ KP +K N D A E + +G+++RN KGE MAS C +IP E +
Sbjct: 557 VV---WKPPQPGRYKANFDGAFFEESHEAGVGVIIRNHKGEVMASLCQRIPFPQSVEALE 616
Query: 184 AMAVRHGMDLAMDLGFQRIEMETDALHVVNLLNNEMHCRSKVGRLVEEIKSLARNFLFVS 243
A A R + L+ DLG + +++E D+L +VN L N C S G L+ + K LA++ L V
Sbjct: 617 AYAARSAVQLSKDLGLKEVDIEGDSLTIVNDLCNPEPCYSLYGHLINDTKLLAQDGLSVL 676
Query: 244 FGWCGRDANSIAHKLAKMRAFENEEQFWMEEVP 259
F RD N +AH +AK + WME VP
Sbjct: 677 FTHVKRDGNILAHSIAKKAKVSKPFEVWMESVP 706
BLAST of Sed0017704 vs. ExPASy TrEMBL
Match:
A0A2N9J0V8 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59068 PE=4 SV=1)
HSP 1 Score: 134.4 bits (337), Expect = 7.3e-28
Identity = 77/271 (28.41%), Postives = 130/271 (47.97%), Query Frame = 0
Query: 3 EDSICKRCHKLAETTFHAIWACKHAQDSWRGSPFLHYGFPNHVTEVADLFCWFYGKLRSK 62
+D C C E T+HA+W CK+ Q+ W+ + + +H + +L+C LR++
Sbjct: 343 DDPSCPNCTASIEDTYHALWTCKNLQEVWQATEWGRKLQGSHYVDFMELYCALTRTLRTE 402
Query: 63 QMQKFMIMCWRNWNCRNME-----VNEVFK--PSDATDQKTFY--------LPAYDWDYL 122
++Q F + W W RN + + E+ + P F+ P
Sbjct: 403 ELQIFAMASWSIWYRRNRQRLGQPIEEIHRLIPRSLELLMEFHQAQDDNSPKPEPTRPAC 462
Query: 123 LDKLKPLDAVNFKINVDAAINSEDRRSVLGMVMRNWKGEAMASYCCQIPGIIDSEIAKAM 182
L K P A ++K N D AI +E + +G+++RN +G MAS +IP E +A
Sbjct: 463 LAKWNPPAAGSYKANFDGAIFTETSEAGIGVIIRNDQGAVMASLSQRIPYPHSVEAVEAF 522
Query: 183 AVRHGMDLAMDLGFQRIEMETDALHVVNLLNNEMHCRSKVGRLVEEIKSLARNFLFVSFG 242
A R A+DLG + + E D+L ++ L + C ++ G L+ + K++A++F+ F
Sbjct: 523 AARSAAQFALDLGLRDVSFEGDSLKIITALQHHSPCNTQYGYLITDTKTIAQDFISCHFV 582
Query: 243 WCGRDANSIAHKLAKMRAFENEEQFWMEEVP 259
R+ N +AH LA+ Q WME+VP
Sbjct: 583 HVKREGNRVAHSLAQRARQHEPFQVWMEDVP 613
BLAST of Sed0017704 vs. ExPASy TrEMBL
Match:
A0A2N9F767 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14649 PE=4 SV=1)
HSP 1 Score: 132.1 bits (331), Expect = 3.6e-27
Identity = 85/285 (29.82%), Postives = 130/285 (45.61%), Query Frame = 0
Query: 3 EDSICKRCHKLAETTFHAIWACKHAQDSWRGSPFLHYGFPNHVTEVADLFCWFYGKLRSK 62
+D+ C+ C ETT HA+W C + W P+ + DL + S
Sbjct: 764 DDARCESCKLSVETTLHALWNCPSIELVWSSLPWRASIVGTNFLNFLDLIQFMIANRTSH 823
Query: 63 QMQKFMIMCWRNWNCRNME-VNEVFKPSDATDQKTFYL-------------PAYDWDYLL 122
+ + F ++CW W RN + +++ +P D K L P
Sbjct: 824 EFESFAMVCWSLWYHRNKKRLSQPTEPQDRLVAKAQELLAEYNSAHHSQMPPQPSSASSR 883
Query: 123 DKLKPLDAVNFKINVDAAINSEDRRSVLGMVMRNWKGEAMASYCCQIPGIIDSEIAKAMA 182
+ KP D K+N D A+ +E + +G+++RN GE MA+ C +IP +A A
Sbjct: 884 AEWKPPDLGRCKVNFDGAVFAEREEAGIGVIIRNSNGEPMAALCQRIPYPHSVNAVEASA 943
Query: 183 VRHGMDLAMDLGFQRIEMETDALHVVNLLNNEMHCRSKVGRLVEEIKSLARNFLFVSFGW 242
R LA+D+G +E+E D+ +V+ L + C + G L+E+ K LA++ FVSF
Sbjct: 944 ARAATQLAIDVGILDVEIEGDSAGIVSALLDPNPCLALFGHLIEDTKLLAQSLNFVSFKH 1003
Query: 243 CGRDANSIAHKLAKMRAFENEEQFWMEEVPEMCIRDYLCELVKDF 274
RD NS+AH LAK + W+E V D L L KDF
Sbjct: 1004 VKRDGNSVAHTLAKKAKSSKPLEIWLETVSP----DILPILCKDF 1044
BLAST of Sed0017704 vs. ExPASy TrEMBL
Match:
A0A2N9I1D9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45731 PE=4 SV=1)
HSP 1 Score: 130.2 bits (326), Expect = 1.4e-26
Identity = 81/286 (28.32%), Postives = 122/286 (42.66%), Query Frame = 0
Query: 3 EDSICKRCHKLAETTFHAIWACKHAQDSWRGSPFLHYGFPNHVTEVADLFCWFYGKLRSK 62
+D C C+ ET HA+W C ++ W P+ NH +LF + L
Sbjct: 99 QDPSCGNCNYWNETVLHALWQCNTLEEIWNSVPWGRRLVHNHYLNFMELFHHCHLDLSPS 158
Query: 63 QMQKFMIMCWRNW---NCRNM------------EVNEVFKPSDATDQKTFYLPAYDWDYL 122
++Q F W W NC+ + + A +
Sbjct: 159 ELQLFAFTTWSIWYRRNCQRLNQQPAPLNQLMPRAQHLLSEFQAAQESPSSTSGQSDPPT 218
Query: 123 LDKLKPLDAVNFKINVDAAINSEDRRSVLGMVMRNWKGEAMASYCCQIPGIIDSEIAKAM 182
KP +K N D A + + +G+++RN +G AMAS C +IP E +A
Sbjct: 219 KVSWKPPQPGRYKANYDGAFFEDSNEAGIGVIIRNHRGAAMASLCQRIPFPHSVEAMEAY 278
Query: 183 AVRHGMDLAMDLGFQRIEMETDALHVVNLLNNEMHCRSKVGRLVEEIKSLARNFLFVSFG 242
A R ++L+ DLG + +++E D+ +VN L N C + G LV + K +A++ L V F
Sbjct: 279 AARSAIELSNDLGLKEVDIEGDSQTIVNALCNPEPCNTLYGHLVNDTKLIAQDSLSVLFL 338
Query: 243 WCGRDANSIAHKLAKMRAFENEEQFWMEEVPEMCIRDYLCELVKDF 274
RD N +AH LAK F + WME VP D + L DF
Sbjct: 339 HVKRDGNVLAHSLAKRAKFSKPFEVWMESVPP----DLISILCNDF 380
BLAST of Sed0017704 vs. ExPASy TrEMBL
Match:
A0A2N9J4C9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59073 PE=4 SV=1)
HSP 1 Score: 126.7 bits (317), Expect = 1.5e-25
Identity = 86/292 (29.45%), Postives = 127/292 (43.49%), Query Frame = 0
Query: 4 DSICKRCHKLAETTFHAIWACKHAQDSWRGSPFLHYGFPNHVTEVADLFCWFYGKLRSKQ 63
D C+ C ET HA+W CK + W P+ N +LF + L + +
Sbjct: 1529 DPRCESCTDTNETVIHALWQCKSLEAVWSSVPWGRRLINNPYLNFMELFHHCHSVLSTLE 1588
Query: 64 MQKFMIMCWRNWNCRN--------MEVNEVFKPSD---ATDQKTFYLPA----------- 123
+Q F I W W RN + ++++ + + Q +PA
Sbjct: 1589 LQLFAITTWAIWYRRNCLRLNQQPVAIHQLMPRAQQILSEFQAAQEIPASTSGPSDPPSP 1648
Query: 124 YDWDYLLDKLKPLDAVNFKINVDAAINSEDRRSVLGMVMRNWKGEAMASYCCQIPGIIDS 183
W +P +K+N D A E + +G+V+RN GE MAS C ++P
Sbjct: 1649 ISW-------QPPHPGRYKVNYDGAFFEETNEAGIGVVIRNHMGEVMASLCQRVPFPHSV 1708
Query: 184 EIAKAMAVRHGMDLAMDLGFQRIEMETDALHVVNLLNNEMHCRSKVGRLVEEIKSLARNF 243
E +A A R ++L+ DLGF+ +ME D+ VVN L N C + G LV + K +A+
Sbjct: 1709 EAMEAYAARSAIELSRDLGFKEFDMEGDSKTVVNALCNPEPCNTLYGHLVNDTKRIAQAD 1768
Query: 244 LFVSFGWCGRDANSIAHKLAKMRAFENEEQFWMEEVPEMCIRDYLCELVKDF 274
L V + RD N +AH LAK + WME VP D + L DF
Sbjct: 1769 LSVLYLHTKRDGNVLAHSLAKRAKVSKSYEVWMESVPP----DLISILCNDF 1809
BLAST of Sed0017704 vs. TAIR 10
Match:
AT3G23320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 49.3 bits (116), Expect = 5.9e-06
Identity = 36/134 (26.87%), Postives = 64/134 (47.76%), Query Frame = 0
Query: 109 DKLKPLDAVNFKINVDAAINSEDRRSVLGMVMRNWKGEAMASYCCQIPGIIDSEIAKAMA 168
DK + A K N D + ++ + S L ++RN +G + C + G + A+ A
Sbjct: 28 DKWQKPGAEWVKCNYDVSNHAGRQDSGLRWIIRNSQGTCLDCGCGKFQGRQTIKEAECTA 87
Query: 169 VRHGMDLAMDLGFQRIEMETDALHVVNLLNNEMHCRSKVGRLVEEIKSLARNFLFVSFGW 228
+ + A DLG++R+E E D + V L+ N+ ++ +E I+ ++ F V F +
Sbjct: 88 LIWAIQCAWDLGYRRVEFEGDNITVNRLIRNK-ETNPRLRYYLEFIQQWSKAFTTVKFTF 147
Query: 229 CGRDANSIAHKLAK 243
R+ N LAK
Sbjct: 148 RHREQNVCVDVLAK 160
BLAST of Sed0017704 vs. TAIR 10
Match:
AT1G10000.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 45.1 bits (105), Expect = 1.1e-04
Identity = 60/258 (23.26%), Postives = 99/258 (38.37%), Query Frame = 0
Query: 7 CKRCHKLAETTFHAIWACKHAQDSWRGSPFL--HYGFPNHVTEVADLF--CWFYGKLRSK 66
C RC ET+ H ++ C A W +P H + E +L +
Sbjct: 33 CARC-GAPETSTHMLFHCDFAAQVWNLAPLQLGHIPIGTPILEALNLLKKTIVLPPVGIH 92
Query: 67 QMQKFMIMCWRNWNCRNMEV--NEVFKPSDATDQKTFYLPAYDWDYL-LDKLKPLD---- 126
F +CW W RN + N F + + A+ L L K++
Sbjct: 93 TATLFPWICWHIWKARNQLIFQNSHFSVIETVTKAVQDALAWQSAQLALPKVRVATPRPN 152
Query: 127 -----AVNFKINVDAAINSEDRRSVLGMVMRNWKGE-----AMASYCCQIPGIIDSEIAK 186
+F VDAA + + G V + ++ C + P + A+
Sbjct: 153 STTTLTHDFLCYVDAAWQQQSSLAGSGWVFQATSHSEKEITTFSAGCRRFPSPL---AAE 212
Query: 187 AMAVRHGMDLAMDLGFQRIEMETDALHVVNLLNNEMHCRSKVGRLVEEIKSLARNFLFVS 244
A A++ M A+ L + + +D+ +V+ LN+ + G LV EI+S+ F +S
Sbjct: 213 AWAIKSAMLHALQLERSDLLVLSDSKSIVDALNSNVSLNEIFGLLV-EIRSIRNRFRSIS 272
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A2N9ED81 | 2.5e-28 | 30.77 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS466 PE=4 SV=1 | [more] |
A0A2N9J0V8 | 7.3e-28 | 28.41 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59068 PE=4 SV=1 | [more] |
A0A2N9F767 | 3.6e-27 | 29.82 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14649 PE=4 SV=1 | [more] |
A0A2N9I1D9 | 1.4e-26 | 28.32 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45731 PE=4 SV=1 | [more] |
A0A2N9J4C9 | 1.5e-25 | 29.45 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59073 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT3G23320.1 | 5.9e-06 | 26.87 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |
AT1G10000.1 | 1.1e-04 | 23.26 | Ribonuclease H-like superfamily protein | [more] |