Sed0017688 (gene) Chayote v1

Overview


Name	Sed0017688
Type	gene
Organism	Sechium edule (Chayote v1)
Description	MYND-type domain-containing protein
Location	LG06: 42237933 .. 42239504 (-)
RNA-Seq Expression	Sed0017688
Synteny	Sed0017688

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAACCAAAGAGGAAAAAAGAAAAAACAGAATTCTCATCCATGAGAACTCGAAGAGGCTTATGTTATCCTCGATTTGAAACCGCCGTGTTTTCCGACAGAAAAAGAACCCACGATTTTGCCGCCGCCGCCGGTCATGTTCGCCGGAAAAGAACCAAGGTCTGTTATCCGGTCACTTCTCCGACCACCGATTTGTTCGATTCCTTGCCCGATGACCTCGTCATTTCTATTCTCTCTAAACTCAGCCCCGCCGCCTCTTCTCCGGCTGATTTCATCCATATCCTACTAACGTACGCCCTTGATATTTGTTTAATTTAATTGGGTGCTTTTTGAATTTTATTTTTGGGTAATGGGTTTGATTTTGAATTTGATTTGCGGGTTTTTTTTTTGGCAGATGTAAGAGATTAAACAATTTGGGTCTTAATCCCTTGGTTTTGTCTAAAGCATCTCTTAAGACGTTTGCGATGAAGGCGAAGAACTGGTCGGAATCGGCTCACCGGTTTTTGAAACTCTGTTCCGACGCAGGCAATGTGGAGGCCTGTTATACACTCGGCATGGTTAGTTTTAATTTTCATTTTTTTTAATATTCTAATCTCATTTTGGAAGCTAATTCCCATTAATTTACGAATTTTGATTTGATTTATTGACGTTTTGTGTTTAATTGAAACAGATTCGTTTCTACTGTTTGCAAAATCGAGGCAGTGGAGCTTCGTTGATGGCGAAGGCGGCGATTCGTTCTCACGCGCCGGCGCTTTACTCACTTGCCGTTATTCAGTTCAACGGCAGCGGCGGCTCCAAAACCGACAAGGACCTACGCGCCGGAGTCGCTCTATGCGCACGCGCCGCCTTCCTCGGCCACGTCGACGCGCTCAGAGAACTCGGCCATTGCCTCCAAGACGGTTACGGCGTTCGCCAGAACGTAACGGAGGGGCGGCGCTTCCTCGTTCAGGCGAACGCGCGTGAACTCGCCGCCGTTCTCTCTTCCGACGCGTCTTCGTCCGTCATCGCCACGCGCTCGTGCCTCACGTGGGATTCTCGTGCGTCTCACCGGCACGTGACCGGCACGGTATGCCCGTTGTTGAGTGATTTCGGGTGTAATATCCCGGCGCCGGAAGCGCACCCGGCGAGTCAGTTTTTGGCGGAGTGGTTCGCCGCACGTGGCGGGTCGCCGGGGAATGGGCTGAGGCTGTGCTCGCACGTGGGGTGTGGACGGCCGGAGTCTAGACGGCATGAGTTCCGTCGGTGTTCCGTTTGTGGTGCCGTTAACTACTGCTCACGTGCGTGTCAGGCGCTGGATTGGAAACTCCGCCATAAGATGGATTGCGCGCCGGTGGAACGTTGGCTGGATGATAACGGTGACGGTGTTGCCGATGTGGCCCATGATATCATGGCAGAAAGTTAGAATCGTGAATTTGACGGTGACGGTGGCCGTTACCAAAGAAAAAAATTAAAAAAGAGAAAAGAAAAGAAATATAGAGTCCATTTTTTGGAGATATTAATTATCTTATTTAATGATGGCCGTTGAATGGGCGCGGCGCGGCGGGGCTTTTTATGTCCCTTTTTGTACAGGGTG

mRNA sequence

CAAAACCAAAGAGGAAAAAAGAAAAAACAGAATTCTCATCCATGAGAACTCGAAGAGGCTTATGTTATCCTCGATTTGAAACCGCCGTGTTTTCCGACAGAAAAAGAACCCACGATTTTGCCGCCGCCGCCGGTCATGTTCGCCGGAAAAGAACCAAGGTCTGTTATCCGGTCACTTCTCCGACCACCGATTTGTTCGATTCCTTGCCCGATGACCTCGTCATTTCTATTCTCTCTAAACTCAGCCCCGCCGCCTCTTCTCCGGCTGATTTCATCCATATCCTACTAACATGTAAGAGATTAAACAATTTGGGTCTTAATCCCTTGGTTTTGTCTAAAGCATCTCTTAAGACGTTTGCGATGAAGGCGAAGAACTGGTCGGAATCGGCTCACCGGTTTTTGAAACTCTGTTCCGACGCAGGCAATGTGGAGGCCTGTTATACACTCGGCATGATTCGTTTCTACTGTTTGCAAAATCGAGGCAGTGGAGCTTCGTTGATGGCGAAGGCGGCGATTCGTTCTCACGCGCCGGCGCTTTACTCACTTGCCGTTATTCAGTTCAACGGCAGCGGCGGCTCCAAAACCGACAAGGACCTACGCGCCGGAGTCGCTCTATGCGCACGCGCCGCCTTCCTCGGCCACGTCGACGCGCTCAGAGAACTCGGCCATTGCCTCCAAGACGGTTACGGCGTTCGCCAGAACGTAACGGAGGGGCGGCGCTTCCTCGTTCAGGCGAACGCGCGTGAACTCGCCGCCGTTCTCTCTTCCGACGCGTCTTCGTCCGTCATCGCCACGCGCTCGTGCCTCACGTGGGATTCTCGTGCGTCTCACCGGCACGTGACCGGCACGGTATGCCCGTTGTTGAGTGATTTCGGGTGTAATATCCCGGCGCCGGAAGCGCACCCGGCGAGTCAGTTTTTGGCGGAGTGGTTCGCCGCACGTGGCGGGTCGCCGGGGAATGGGCTGAGGCTGTGCTCGCACGTGGGGTGTGGACGGCCGGAGTCTAGACGGCATGAGTTCCGTCGGTGTTCCGTTTGTGGTGCCGTTAACTACTGCTCACGTGCGTGTCAGGCGCTGGATTGGAAACTCCGCCATAAGATGGATTGCGCGCCGGTGGAACGTTGGCTGGATGATAACGGTGACGGTGTTGCCGATGTGGCCCATGATATCATGGCAGAAAGTTAGAATCGTGAATTTGACGGTGACGGTGGCCGTTACCAAAGAAAAAAATTAAAAAAGAGAAAAGAAAAGAAATATAGAGTCCATTTTTTGGAGATATTAATTATCTTATTTAATGATGGCCGTTGAATGGGCGCGGCGCGGCGGGGCTTTTTATGTCCCTTTTTGTACAGGGTG

Coding sequence (CDS)

ATGAGAACTCGAAGAGGCTTATGTTATCCTCGATTTGAAACCGCCGTGTTTTCCGACAGAAAAAGAACCCACGATTTTGCCGCCGCCGCCGGTCATGTTCGCCGGAAAAGAACCAAGGTCTGTTATCCGGTCACTTCTCCGACCACCGATTTGTTCGATTCCTTGCCCGATGACCTCGTCATTTCTATTCTCTCTAAACTCAGCCCCGCCGCCTCTTCTCCGGCTGATTTCATCCATATCCTACTAACATGTAAGAGATTAAACAATTTGGGTCTTAATCCCTTGGTTTTGTCTAAAGCATCTCTTAAGACGTTTGCGATGAAGGCGAAGAACTGGTCGGAATCGGCTCACCGGTTTTTGAAACTCTGTTCCGACGCAGGCAATGTGGAGGCCTGTTATACACTCGGCATGATTCGTTTCTACTGTTTGCAAAATCGAGGCAGTGGAGCTTCGTTGATGGCGAAGGCGGCGATTCGTTCTCACGCGCCGGCGCTTTACTCACTTGCCGTTATTCAGTTCAACGGCAGCGGCGGCTCCAAAACCGACAAGGACCTACGCGCCGGAGTCGCTCTATGCGCACGCGCCGCCTTCCTCGGCCACGTCGACGCGCTCAGAGAACTCGGCCATTGCCTCCAAGACGGTTACGGCGTTCGCCAGAACGTAACGGAGGGGCGGCGCTTCCTCGTTCAGGCGAACGCGCGTGAACTCGCCGCCGTTCTCTCTTCCGACGCGTCTTCGTCCGTCATCGCCACGCGCTCGTGCCTCACGTGGGATTCTCGTGCGTCTCACCGGCACGTGACCGGCACGGTATGCCCGTTGTTGAGTGATTTCGGGTGTAATATCCCGGCGCCGGAAGCGCACCCGGCGAGTCAGTTTTTGGCGGAGTGGTTCGCCGCACGTGGCGGGTCGCCGGGGAATGGGCTGAGGCTGTGCTCGCACGTGGGGTGTGGACGGCCGGAGTCTAGACGGCATGAGTTCCGTCGGTGTTCCGTTTGTGGTGCCGTTAACTACTGCTCACGTGCGTGTCAGGCGCTGGATTGGAAACTCCGCCATAAGATGGATTGCGCGCCGGTGGAACGTTGGCTGGATGATAACGGTGACGGTGTTGCCGATGTGGCCCATGATATCATGGCAGAAAGTTAG

Protein sequence

MRTRRGLCYPRFETAVFSDRKRTHDFAAAAGHVRRKRTKVCYPVTSPTTDLFDSLPDDLVISILSKLSPAASSPADFIHILLTCKRLNNLGLNPLVLSKASLKTFAMKAKNWSESAHRFLKLCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIRSHAPALYSLAVIQFNGSGGSKTDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNVTEGRRFLVQANARELAAVLSSDASSSVIATRSCLTWDSRASHRHVTGTVCPLLSDFGCNIPAPEAHPASQFLAEWFAARGGSPGNGLRLCSHVGCGRPESRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLDDNGDGVADVAHDIMAES

Homology

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BLAST of Sed0017688 vs. NCBI nr
Match: KAG6601598.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 652.1 bits (1681), Expect = 2.9e-183
Identity = 321/385 (83.38%), Postives = 348/385 (90.39%), Query Frame = 0


Query: 1   MRTRRGLCYPRFETAVFSD---RKRTHDFAAAAGHVR--RKRTKVCYPVTSPTTDLFDSL 60
           MRTRRGLCYPR ++  FSD   RKRTH+ AAAA   +  RKR K    + +PT+DLFDSL
Sbjct: 1   MRTRRGLCYPRLQSPFFSDNRVRKRTHEAAAAAADRQFCRKRNKPSPDIKTPTSDLFDSL 60

Query: 61  PDDLVISILSKLSPAASSPADFIHILLTCKRLNNLGLNPLVLSKASLKTFAMKAKNWSES 120
           PDDLVISILSKLS AASSP++FI+ILLTCKRLN+LGLNP+VLS+ASLK FA+ A+NW+ES
Sbjct: 61  PDDLVISILSKLSSAASSPSEFINILLTCKRLNSLGLNPVVLSRASLKIFAISARNWTES 120

Query: 121 AHRFLKLCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIRSHAPALYSLAVIQFNG 180
           AHRFLK CSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNG
Sbjct: 121 AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNG 180

Query: 181 SGGSKTDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNVTEGRRFLVQANARE 240
           SGGSK DK+LRAGVALCARAAFLGH+DALRELGHCLQDGYGVRQN+TEGRRFLVQANARE
Sbjct: 181 SGGSKNDKNLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE 240

Query: 241 LAAVLSSDASSSVIATRSCLTWDSRASHRHVTGTVCPLLSDFGCNIPAPEAHPASQFLAE 300
           LAAVLSS+A SSV A+R+CLTW+    HRHVTG+ CPLLSDFGCNIPAPEAHPASQFLAE
Sbjct: 241 LAAVLSSEAGSSVTASRTCLTWNPHPHHRHVTGSACPLLSDFGCNIPAPEAHPASQFLAE 300

Query: 301 WFAARGGSPGNGLRLCSHVGCGRPESRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC 360
           WFAARGGSPG+GLRLCSHVGCGRPE+RRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC
Sbjct: 301 WFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC 360

Query: 361 APVERWLDDNGDGVADVAHDIMAES 381
            PVERWLDDNGDG AD   D+M ES
Sbjct: 361 VPVERWLDDNGDGGADGVDDMMDES 385

[Close]

BLAST of Sed0017688 vs. NCBI nr
Match: KAG7034708.1 (F-box protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 650.2 bits (1676), Expect = 1.1e-182
Identity = 321/385 (83.38%), Postives = 346/385 (89.87%), Query Frame = 0


Query: 1   MRTRRGLCYPRFETAVFSD---RKRTH--DFAAAAGHVRRKRTKVCYPVTSPTTDLFDSL 60
           MRTRRGLCYPR ++  FSD   RKRTH  D AAA     RKR K    + +PT+DLFDSL
Sbjct: 1   MRTRRGLCYPRLQSPFFSDNRVRKRTHEADAAAADRQFCRKRNKPSPDIKTPTSDLFDSL 60

Query: 61  PDDLVISILSKLSPAASSPADFIHILLTCKRLNNLGLNPLVLSKASLKTFAMKAKNWSES 120
           PDDLVISILSKLS AASSP++FI+ILLTCKRLN+LGLNP+VLS+ASLK FA+ A+NW+ES
Sbjct: 61  PDDLVISILSKLSSAASSPSEFINILLTCKRLNSLGLNPVVLSRASLKIFAISARNWTES 120

Query: 121 AHRFLKLCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIRSHAPALYSLAVIQFNG 180
           AHRFLK CSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNG
Sbjct: 121 AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNG 180

Query: 181 SGGSKTDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNVTEGRRFLVQANARE 240
           SGGSK DK+LRAGVALCARAAFLGH+DALRELGHCLQDGYGVRQN+TEGRRFLVQANARE
Sbjct: 181 SGGSKNDKNLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE 240

Query: 241 LAAVLSSDASSSVIATRSCLTWDSRASHRHVTGTVCPLLSDFGCNIPAPEAHPASQFLAE 300
           LAAVLSS+A SSV A+R+CLTW+    HRHVTG+ CPLLSDFGCNIPAPEAHPASQFLAE
Sbjct: 241 LAAVLSSEAGSSVTASRTCLTWNPHPHHRHVTGSACPLLSDFGCNIPAPEAHPASQFLAE 300

Query: 301 WFAARGGSPGNGLRLCSHVGCGRPESRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC 360
           WFAARGGSPG+GLRLCSHVGCGRPE+RRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC
Sbjct: 301 WFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC 360

Query: 361 APVERWLDDNGDGVADVAHDIMAES 381
            PVERWLDDNGDG AD   D+M ES
Sbjct: 361 VPVERWLDDNGDGGADGVDDMMDES 385

[Close]

BLAST of Sed0017688 vs. NCBI nr
Match: XP_022957417.1 (F-box protein At1g67340 [Cucurbita moschata])

HSP 1 Score: 646.0 bits (1665), Expect = 2.1e-181
Identity = 319/384 (83.07%), Postives = 343/384 (89.32%), Query Frame = 0


Query: 1   MRTRRGLCYPRFETAVFSD---RKRTHDFAAAAG-HVRRKRTKVCYPVTSPTTDLFDSLP 60
           MRTRRGLCYPR +   FSD   RKRTHD AA A     RKR K    + +PT+DLFDSLP
Sbjct: 1   MRTRRGLCYPRLQPPFFSDNRVRKRTHDAAADADRQFCRKRNKPSPDIKTPTSDLFDSLP 60

Query: 61  DDLVISILSKLSPAASSPADFIHILLTCKRLNNLGLNPLVLSKASLKTFAMKAKNWSESA 120
           DDLVISILSKLS AASSP++FI+ILLTCKRLN+LGLNP+VLS+ASLK FA+ A+NW+ESA
Sbjct: 61  DDLVISILSKLSSAASSPSEFINILLTCKRLNSLGLNPVVLSRASLKIFAISARNWTESA 120

Query: 121 HRFLKLCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIRSHAPALYSLAVIQFNGS 180
           HRFLK CSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNGS
Sbjct: 121 HRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNGS 180

Query: 181 GGSKTDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNVTEGRRFLVQANAREL 240
           GGSK DK+L AGVALCARAAFLGH+DALRELGHCLQDGYGVRQN+TEGRRFLVQANAREL
Sbjct: 181 GGSKNDKNLGAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANAREL 240

Query: 241 AAVLSSDASSSVIATRSCLTWDSRASHRHVTGTVCPLLSDFGCNIPAPEAHPASQFLAEW 300
           AAVLSS+A SSV A+R+CLTW+    HRHVTG+ CPLLSDFGCNIPAPE HPASQFLAEW
Sbjct: 241 AAVLSSEAGSSVAASRTCLTWNPHPHHRHVTGSACPLLSDFGCNIPAPEVHPASQFLAEW 300

Query: 301 FAARGGSPGNGLRLCSHVGCGRPESRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCA 360
           FAARGGSPG+GLRLCSHVGCGRPE+RRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC 
Sbjct: 301 FAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCV 360

Query: 361 PVERWLDDNGDGVADVAHDIMAES 381
           PVERWLDDNGDG AD   D+M ES
Sbjct: 361 PVERWLDDNGDGGADGVDDMMDES 384

[Close]

BLAST of Sed0017688 vs. NCBI nr
Match: XP_004135325.1 (F-box protein At1g67340 [Cucumis sativus] >KGN51672.1 hypothetical protein Csa_008598 [Cucumis sativus])

HSP 1 Score: 643.7 bits (1659), Expect = 1.0e-180
Identity = 319/383 (83.29%), Postives = 346/383 (90.34%), Query Frame = 0


Query: 1   MRTRRGLCYPRFETAVFS--DRKRTHDFAAAAGHVRRKRTKVCYPVTSPTTDLFDSLPDD 60
           MRTR GL YP  +   F+  +RKR H  AA      RKR K+ Y + +PT+DLFDSLPDD
Sbjct: 1   MRTRTGLSYPPLQPTAFASGNRKRKHHVAADRPFC-RKRNKLSYHIKTPTSDLFDSLPDD 60

Query: 61  LVISILSKLSPAASSPADFIHILLTCKRLNNLGLNPLVLSKASLKTFAMKAKNWSESAHR 120
           LVI+ILS LS AASSP+DFI+ILLTCKRLNNLGLNP+VLS+AS KTFA++AKNW+ESAHR
Sbjct: 61  LVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHR 120

Query: 121 FLKLCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIRSHAPALYSLAVIQFNGSGG 180
           FLK CSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNGSGG
Sbjct: 121 FLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGG 180

Query: 181 SKTDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNVTEGRRFLVQANARELAA 240
           SK DKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGVRQN+TEGRRFLVQANARELAA
Sbjct: 181 SKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAA 240

Query: 241 VLSSDASSSVIATRSCLTWDSR-ASHRHVTGTVCPLLSDFGCNIPAPEAHPASQFLAEWF 300
           VLSS+A+SSV A+RSCLTW+++   HRHVTG+ CPLLSDFGCNIPAPEAHPASQFLAEWF
Sbjct: 241 VLSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWF 300

Query: 301 AARGGSPGNGLRLCSHVGCGRPESRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAP 360
            ARGGSPGNGLRLCSHVGCGRPE+RRHEFRRCSVCGAVNYCSRACQALDWKLRHK+DCAP
Sbjct: 301 EARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKIDCAP 360

Query: 361 VERWLDDNGDGVADVAHDIMAES 381
           VERWLDDNGDG+ DVA DIM ES
Sbjct: 361 VERWLDDNGDGMDDVADDIMDES 382

[Close]

BLAST of Sed0017688 vs. NCBI nr
Match: XP_022998094.1 (F-box protein At1g67340 [Cucurbita maxima])

HSP 1 Score: 643.3 bits (1658), Expect = 1.3e-180
Identity = 318/383 (83.03%), Postives = 344/383 (89.82%), Query Frame = 0


Query: 1   MRTRRGLCYPRFETAVFSD---RKRTHDFAAAAGHVRRKRTKVCYPVTSPTTDLFDSLPD 60
           MRTRRGLCYPR + A FSD   RKRTHD A+A  H  RKR K+   + +PT+DLFDSLPD
Sbjct: 1   MRTRRGLCYPRLDAAFFSDNRVRKRTHD-ASADRHFCRKRNKLSPDIKTPTSDLFDSLPD 60

Query: 61  DLVISILSKLSPAASSPADFIHILLTCKRLNNLGLNPLVLSKASLKTFAMKAKNWSESAH 120
           DLVISILSKL  AASS ++FI+ILLTCKRLN+LGLNP+VLS+ASLK FA+ A+NW+ESAH
Sbjct: 61  DLVISILSKLGAAASSSSEFINILLTCKRLNSLGLNPIVLSRASLKIFAISARNWTESAH 120

Query: 121 RFLKLCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIRSHAPALYSLAVIQFNGSG 180
           RFLK C+DAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNGSG
Sbjct: 121 RFLKQCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSG 180

Query: 181 GSKTDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNVTEGRRFLVQANARELA 240
           GSK DK LRAGVALCARAAFLGH+DALRELGHCLQDGYGVRQN+TEGRRFLVQANARELA
Sbjct: 181 GSKNDKILRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELA 240

Query: 241 AVLSSDASSSVIATRSCLTWDSRASHRHVTGTVCPLLSDFGCNIPAPEAHPASQFLAEWF 300
           AVLSS+A SSV A+R+ LTW+    HRHVTG+ CPLLSDFGCNIPAPEAHPASQFLAEWF
Sbjct: 241 AVLSSEAGSSVTASRTFLTWNPHPHHRHVTGSACPLLSDFGCNIPAPEAHPASQFLAEWF 300

Query: 301 AARGGSPGNGLRLCSHVGCGRPESRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAP 360
           AARGGSPG+GLRLCSHVGCGRPE+RRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC P
Sbjct: 301 AARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCVP 360

Query: 361 VERWLDDNGDGVADVAHDIMAES 381
           VERWLDDNGDG AD   D+M ES
Sbjct: 361 VERWLDDNGDGGADGVVDMMDES 382

[Close]

BLAST of Sed0017688 vs. ExPASy Swiss-Prot
Match: Q9FYF9 (F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 5.9e-139
Identity = 253/344 (73.55%), Postives = 279/344 (81.10%), Query Frame = 0


Query: 43  PVTSPTT--DLFDSLPDDLVISILSKLSPAASSPADFIHILLTCKRLNNLGLNPLVLSKA 102
           PV   TT  DL DS+PDDLVISIL KL   +  PADFI++LLTCKRL  L +NP+VLS+ 
Sbjct: 33  PVPENTTGADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRL 92

Query: 103 SLKTFAMKAKNWSESAHRFLKLCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIRS 162
           S K  A+KA NWSE +HRFLK C DAG++EACYTLGMIRFYCLQNRG+GASLMAKAAI S
Sbjct: 93  SPKAIAVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISS 152

Query: 163 HAPALYSLAVIQFNGSGGSKTDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQN 222
           HAPALYSLAVIQFNGSGGSK DKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGV QN
Sbjct: 153 HAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQN 212

Query: 223 VTEGRRFLVQANARELAAVLSSDASSSVIATRSCLTWDSRA--------SHRHVTGTVCP 282
           V+EGRRFLVQANARELAAVLSS      I  RS  TW S +        +H   T   CP
Sbjct: 213 VSEGRRFLVQANARELAAVLSSG-----IQARS--TWLSLSQPPPPVVPNHGQQT---CP 272

Query: 283 LLSDFGCNIPAPEAHPASQFLAEWFAARGGS-PGNGLRLCSHVGCGRPESRRHEFRRCSV 342
           LLSDFGCN+PAPE HPA++FLA+WFA RGG  PG+GLRLCSH GCGRPE+R+HEFRRCSV
Sbjct: 273 LLSDFGCNVPAPETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSV 332

Query: 343 CGAVNYCSRACQALDWKLRHKMDCAPVERWLDDNGDGVADVAHD 376
           CG VNYCSRACQALDWKLRHKMDCAPV+RWL++   G  +V  D
Sbjct: 333 CGVVNYCSRACQALDWKLRHKMDCAPVQRWLEEGDGGEGNVQID 366

[Close]

BLAST of Sed0017688 vs. ExPASy Swiss-Prot
Match: Q9FK27 (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 7.6e-110
Identity = 200/325 (61.54%), Postives = 245/325 (75.38%), Query Frame = 0


Query: 52  FDSLPDDLVISILSKLSPAASSPADFIHILLTCKRLNNLGLNPLVLSKASLKTFAMKAKN 111
           F+ L DDL+ISIL KL+ +ASSP+DF+ +L TCKRLN LGL+PLVLSKA  +T A+ A+ 
Sbjct: 22  FEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVTAEK 81

Query: 112 WSESAHRFLKLCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIRSHAPALYSLAVI 171
           WS+S+H+FLKLC +AGN++A Y+LGMIRFYCLQN  SGASLMAKAAI+SHAPALYSL+VI
Sbjct: 82  WSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYSLSVI 141

Query: 172 QFNGSGGSKTDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNVTEGRRFLVQA 231
           QFNGSGGSKTDK+LRAGVALCAR+A+LGHVDALRELGHCLQDGYGV ++V+EGRR L+QA
Sbjct: 142 QFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSEGRRLLIQA 201

Query: 232 NARELAAVLSSDASSSVIATRSCLTWDSRASHRHVTGTVCPLLSDFGCNIPAPEAHPASQ 291
           NARELA  L S  S                     +G     L+D    +P  E HP ++
Sbjct: 202 NARELACSLRSYLSLK-------------------SGDENETLTDLSV-VPVQEIHPVNR 261

Query: 292 FLAEWFAARGGSPGNGLRLCSHVGCGRPESRRHEFRRCSVCGAVNYCSRACQALDWKLRH 351
           FL EWF++       GLR+CSH GCGRPE+R HEFRRCSVCG VNYCSR CQALDW+ +H
Sbjct: 262 FLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALDWRAKH 321

Query: 352 KMDCAPVERW------LDDNGDGVA 371
           K++C P++ W      + D+G+ VA
Sbjct: 322 KVECTPLDLWVAAAAEIGDDGEAVA 326

[Close]

BLAST of Sed0017688 vs. ExPASy Swiss-Prot
Match: Q2YDC9 (Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.5e-04
Identity = 22/54 (40.74%), Postives = 29/54 (53.70%), Query Frame = 0


Query: 306 NGLRLCSHVGCGRPESRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVE 360
           +G  LC   GC  P       +RCS C   +YCS+  Q+LDW+L HK  CA  +
Sbjct: 130 SGAHLCRVCGCSGP-------KRCSRCHKAHYCSKEHQSLDWRLGHKQACAQTD 176

[Close]

BLAST of Sed0017688 vs. ExPASy Swiss-Prot
Match: Q9FPS9 (Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana OX=3702 GN=UBP15 PE=1 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 5.6e-04
Identity = 17/32 (53.12%), Postives = 22/32 (68.75%), Query Frame = 0


Query: 328 RCSVCGAVNYCSRACQALDWKLRHKMDCAPVE 360
           RCS C +V YCS  CQ + W++ HK +C PVE
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of Sed0017688 vs. ExPASy TrEMBL
Match: A0A6J1GZ25 (F-box protein At1g67340 OS=Cucurbita moschata OX=3662 GN=LOC111458825 PE=4 SV=1)

HSP 1 Score: 646.0 bits (1665), Expect = 1.0e-181
Identity = 319/384 (83.07%), Postives = 343/384 (89.32%), Query Frame = 0


Query: 1   MRTRRGLCYPRFETAVFSD---RKRTHDFAAAAG-HVRRKRTKVCYPVTSPTTDLFDSLP 60
           MRTRRGLCYPR +   FSD   RKRTHD AA A     RKR K    + +PT+DLFDSLP
Sbjct: 1   MRTRRGLCYPRLQPPFFSDNRVRKRTHDAAADADRQFCRKRNKPSPDIKTPTSDLFDSLP 60

Query: 61  DDLVISILSKLSPAASSPADFIHILLTCKRLNNLGLNPLVLSKASLKTFAMKAKNWSESA 120
           DDLVISILSKLS AASSP++FI+ILLTCKRLN+LGLNP+VLS+ASLK FA+ A+NW+ESA
Sbjct: 61  DDLVISILSKLSSAASSPSEFINILLTCKRLNSLGLNPVVLSRASLKIFAISARNWTESA 120

Query: 121 HRFLKLCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIRSHAPALYSLAVIQFNGS 180
           HRFLK CSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNGS
Sbjct: 121 HRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNGS 180

Query: 181 GGSKTDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNVTEGRRFLVQANAREL 240
           GGSK DK+L AGVALCARAAFLGH+DALRELGHCLQDGYGVRQN+TEGRRFLVQANAREL
Sbjct: 181 GGSKNDKNLGAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANAREL 240

Query: 241 AAVLSSDASSSVIATRSCLTWDSRASHRHVTGTVCPLLSDFGCNIPAPEAHPASQFLAEW 300
           AAVLSS+A SSV A+R+CLTW+    HRHVTG+ CPLLSDFGCNIPAPE HPASQFLAEW
Sbjct: 241 AAVLSSEAGSSVAASRTCLTWNPHPHHRHVTGSACPLLSDFGCNIPAPEVHPASQFLAEW 300

Query: 301 FAARGGSPGNGLRLCSHVGCGRPESRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCA 360
           FAARGGSPG+GLRLCSHVGCGRPE+RRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC 
Sbjct: 301 FAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCV 360

Query: 361 PVERWLDDNGDGVADVAHDIMAES 381
           PVERWLDDNGDG AD   D+M ES
Sbjct: 361 PVERWLDDNGDGGADGVDDMMDES 384

[Close]

BLAST of Sed0017688 vs. ExPASy TrEMBL
Match: A0A0A0KTC5 (MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G589890 PE=4 SV=1)

HSP 1 Score: 643.7 bits (1659), Expect = 5.0e-181
Identity = 319/383 (83.29%), Postives = 346/383 (90.34%), Query Frame = 0


Query: 1   MRTRRGLCYPRFETAVFS--DRKRTHDFAAAAGHVRRKRTKVCYPVTSPTTDLFDSLPDD 60
           MRTR GL YP  +   F+  +RKR H  AA      RKR K+ Y + +PT+DLFDSLPDD
Sbjct: 1   MRTRTGLSYPPLQPTAFASGNRKRKHHVAADRPFC-RKRNKLSYHIKTPTSDLFDSLPDD 60

Query: 61  LVISILSKLSPAASSPADFIHILLTCKRLNNLGLNPLVLSKASLKTFAMKAKNWSESAHR 120
           LVI+ILS LS AASSP+DFI+ILLTCKRLNNLGLNP+VLS+AS KTFA++AKNW+ESAHR
Sbjct: 61  LVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHR 120

Query: 121 FLKLCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIRSHAPALYSLAVIQFNGSGG 180
           FLK CSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNGSGG
Sbjct: 121 FLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGG 180

Query: 181 SKTDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNVTEGRRFLVQANARELAA 240
           SK DKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGVRQN+TEGRRFLVQANARELAA
Sbjct: 181 SKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAA 240

Query: 241 VLSSDASSSVIATRSCLTWDSR-ASHRHVTGTVCPLLSDFGCNIPAPEAHPASQFLAEWF 300
           VLSS+A+SSV A+RSCLTW+++   HRHVTG+ CPLLSDFGCNIPAPEAHPASQFLAEWF
Sbjct: 241 VLSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWF 300

Query: 301 AARGGSPGNGLRLCSHVGCGRPESRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAP 360
            ARGGSPGNGLRLCSHVGCGRPE+RRHEFRRCSVCGAVNYCSRACQALDWKLRHK+DCAP
Sbjct: 301 EARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKIDCAP 360

Query: 361 VERWLDDNGDGVADVAHDIMAES 381
           VERWLDDNGDG+ DVA DIM ES
Sbjct: 361 VERWLDDNGDGMDDVADDIMDES 382

[Close]

BLAST of Sed0017688 vs. ExPASy TrEMBL
Match: A0A6J1KDE5 (F-box protein At1g67340 OS=Cucurbita maxima OX=3661 GN=LOC111492842 PE=4 SV=1)

HSP 1 Score: 643.3 bits (1658), Expect = 6.5e-181
Identity = 318/383 (83.03%), Postives = 344/383 (89.82%), Query Frame = 0


Query: 1   MRTRRGLCYPRFETAVFSD---RKRTHDFAAAAGHVRRKRTKVCYPVTSPTTDLFDSLPD 60
           MRTRRGLCYPR + A FSD   RKRTHD A+A  H  RKR K+   + +PT+DLFDSLPD
Sbjct: 1   MRTRRGLCYPRLDAAFFSDNRVRKRTHD-ASADRHFCRKRNKLSPDIKTPTSDLFDSLPD 60

Query: 61  DLVISILSKLSPAASSPADFIHILLTCKRLNNLGLNPLVLSKASLKTFAMKAKNWSESAH 120
           DLVISILSKL  AASS ++FI+ILLTCKRLN+LGLNP+VLS+ASLK FA+ A+NW+ESAH
Sbjct: 61  DLVISILSKLGAAASSSSEFINILLTCKRLNSLGLNPIVLSRASLKIFAISARNWTESAH 120

Query: 121 RFLKLCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIRSHAPALYSLAVIQFNGSG 180
           RFLK C+DAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNGSG
Sbjct: 121 RFLKQCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSG 180

Query: 181 GSKTDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNVTEGRRFLVQANARELA 240
           GSK DK LRAGVALCARAAFLGH+DALRELGHCLQDGYGVRQN+TEGRRFLVQANARELA
Sbjct: 181 GSKNDKILRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELA 240

Query: 241 AVLSSDASSSVIATRSCLTWDSRASHRHVTGTVCPLLSDFGCNIPAPEAHPASQFLAEWF 300
           AVLSS+A SSV A+R+ LTW+    HRHVTG+ CPLLSDFGCNIPAPEAHPASQFLAEWF
Sbjct: 241 AVLSSEAGSSVTASRTFLTWNPHPHHRHVTGSACPLLSDFGCNIPAPEAHPASQFLAEWF 300

Query: 301 AARGGSPGNGLRLCSHVGCGRPESRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAP 360
           AARGGSPG+GLRLCSHVGCGRPE+RRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC P
Sbjct: 301 AARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCVP 360

Query: 361 VERWLDDNGDGVADVAHDIMAES 381
           VERWLDDNGDG AD   D+M ES
Sbjct: 361 VERWLDDNGDGGADGVVDMMDES 382

[Close]

BLAST of Sed0017688 vs. ExPASy TrEMBL
Match: A0A6J1HSL8 (F-box protein At1g67340-like OS=Cucurbita maxima OX=3661 GN=LOC111466400 PE=4 SV=1)

HSP 1 Score: 636.3 bits (1640), Expect = 7.9e-179
Identity = 321/386 (83.16%), Postives = 344/386 (89.12%), Query Frame = 0


Query: 1   MRTRRGLCYPRFETAVFSD---RKRTHDFAA-AAGHVRRKRTKVCYPVT--SPTTDLFDS 60
           MRTR GLCYPR ET + SD   RKR HD AA    H  RKRTK+   +T   P +DLFDS
Sbjct: 1   MRTRTGLCYPRLETTLCSDSSHRKRNHDVAADRRRHFCRKRTKLSPHITPLPPPSDLFDS 60

Query: 61  LPDDLVISILSKLSPAASSPADFIHILLTCKRLNNLGLNPLVLSKASLKTFAMKAKNWSE 120
           LPDDLVISILSKLS AASSP+DFI+ILLTCKRLNNLGL P+VLSKAS KTFA+KA+NWSE
Sbjct: 61  LPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARNWSE 120

Query: 121 SAHRFLKLCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIRSHAPALYSLAVIQFN 180
           SAHRFLK CSDAGNV+A YTLGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFN
Sbjct: 121 SAHRFLKRCSDAGNVDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFN 180

Query: 181 GSGGSKTDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNVTEGRRFLVQANAR 240
           GSGGSK+DKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQN+TEGRRFLVQANAR
Sbjct: 181 GSGGSKSDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNITEGRRFLVQANAR 240

Query: 241 ELAAVLSSDASSSVIATRSCLTWDSRASHRHVTGTVCPLLSDFGCNIPAPEAHPASQFLA 300
           ELAAVLSS+A SSVIA+RSCLTW+    HRHVTG+ CPLLSDFGCNIPAPEAHP S+F+A
Sbjct: 241 ELAAVLSSEAGSSVIASRSCLTWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSRFMA 300

Query: 301 EWFAARGGSPGNGLRLCSHVGCGRPESRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMD 360
           EWF ARG SPG GLR+CSHVGCGRPE+R+HEFRRCSVCG+VNYCSRACQALDWKLRHKMD
Sbjct: 301 EWFGARGESPGLGLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKMD 360

Query: 361 CAPVERWLDDNGDGVADVAHDIMAES 381
           CAPVERW+DDNGDG AD   DIMAES
Sbjct: 361 CAPVERWVDDNGDGGAD---DIMAES 383

[Close]

BLAST of Sed0017688 vs. ExPASy TrEMBL
Match: A0A6J1FZ36 (F-box protein At1g67340-like OS=Cucurbita moschata OX=3662 GN=LOC111449223 PE=4 SV=1)

HSP 1 Score: 632.1 bits (1629), Expect = 1.5e-177
Identity = 317/385 (82.34%), Postives = 343/385 (89.09%), Query Frame = 0


Query: 1   MRTRRGLCYPRFETAVFSD---RKRTHDFAA-AAGHVRRKRTKVCYPVT-SPTTDLFDSL 60
           MRTR GLCYPR ET + SD   RKRTHD AA    H  RKRTK+   +T  P +DLFDSL
Sbjct: 1   MRTRTGLCYPRLETTLCSDTRHRKRTHDVAADRRPHFCRKRTKLSPQITPPPPSDLFDSL 60

Query: 61  PDDLVISILSKLSPAASSPADFIHILLTCKRLNNLGLNPLVLSKASLKTFAMKAKNWSES 120
           PDDLVISILSKLS AASSP+DFI+ILLTCKRLNNLGL P+VLSKAS KTFA+KA+NWSES
Sbjct: 61  PDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPIVLSKASQKTFAIKARNWSES 120

Query: 121 AHRFLKLCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIRSHAPALYSLAVIQFNG 180
           AHRFLK CSDA N++A YTLGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNG
Sbjct: 121 AHRFLKRCSDAENIDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNG 180

Query: 181 SGGSKTDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNVTEGRRFLVQANARE 240
           SGGSK+DKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGVRQN+TEGRRFLVQANARE
Sbjct: 181 SGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE 240

Query: 241 LAAVLSSDASSSVIATRSCLTWDSRASHRHVTGTVCPLLSDFGCNIPAPEAHPASQFLAE 300
           LAAVLSS+A SSVIA+R C+TW+    HRHVTG+ CPLLSDFGCNIPAPEAHP S+F+AE
Sbjct: 241 LAAVLSSEAGSSVIASRCCVTWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSRFMAE 300

Query: 301 WFAARGGSPGNGLRLCSHVGCGRPESRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC 360
           WF ARG SPG GLR+CSHVGCGRPE+R+HEFRRCSVCG+VNYCSRACQALDWKLRHKMDC
Sbjct: 301 WFGARGESPGIGLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKMDC 360

Query: 361 APVERWLDDNGDGVADVAHDIMAES 381
           APVERW+DDNGDG AD   DIMAES
Sbjct: 361 APVERWVDDNGDGGAD---DIMAES 382

[Close]

BLAST of Sed0017688 vs. TAIR 10
Match: AT1G67340.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 495.4 bits (1274), Expect = 4.2e-140
Identity = 253/344 (73.55%), Postives = 279/344 (81.10%), Query Frame = 0


Query: 43  PVTSPTT--DLFDSLPDDLVISILSKLSPAASSPADFIHILLTCKRLNNLGLNPLVLSKA 102
           PV   TT  DL DS+PDDLVISIL KL   +  PADFI++LLTCKRL  L +NP+VLS+ 
Sbjct: 33  PVPENTTGADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRL 92

Query: 103 SLKTFAMKAKNWSESAHRFLKLCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIRS 162
           S K  A+KA NWSE +HRFLK C DAG++EACYTLGMIRFYCLQNRG+GASLMAKAAI S
Sbjct: 93  SPKAIAVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISS 152

Query: 163 HAPALYSLAVIQFNGSGGSKTDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQN 222
           HAPALYSLAVIQFNGSGGSK DKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGV QN
Sbjct: 153 HAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQN 212

Query: 223 VTEGRRFLVQANARELAAVLSSDASSSVIATRSCLTWDSRA--------SHRHVTGTVCP 282
           V+EGRRFLVQANARELAAVLSS      I  RS  TW S +        +H   T   CP
Sbjct: 213 VSEGRRFLVQANARELAAVLSSG-----IQARS--TWLSLSQPPPPVVPNHGQQT---CP 272

Query: 283 LLSDFGCNIPAPEAHPASQFLAEWFAARGGS-PGNGLRLCSHVGCGRPESRRHEFRRCSV 342
           LLSDFGCN+PAPE HPA++FLA+WFA RGG  PG+GLRLCSH GCGRPE+R+HEFRRCSV
Sbjct: 273 LLSDFGCNVPAPETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSV 332

Query: 343 CGAVNYCSRACQALDWKLRHKMDCAPVERWLDDNGDGVADVAHD 376
           CG VNYCSRACQALDWKLRHKMDCAPV+RWL++   G  +V  D
Sbjct: 333 CGVVNYCSRACQALDWKLRHKMDCAPVQRWLEEGDGGEGNVQID 366

[Close]

BLAST of Sed0017688 vs. TAIR 10
Match: AT5G50450.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 398.7 bits (1023), Expect = 5.4e-111
Identity = 200/325 (61.54%), Postives = 245/325 (75.38%), Query Frame = 0


Query: 52  FDSLPDDLVISILSKLSPAASSPADFIHILLTCKRLNNLGLNPLVLSKASLKTFAMKAKN 111
           F+ L DDL+ISIL KL+ +ASSP+DF+ +L TCKRLN LGL+PLVLSKA  +T A+ A+ 
Sbjct: 22  FEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVTAEK 81

Query: 112 WSESAHRFLKLCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIRSHAPALYSLAVI 171
           WS+S+H+FLKLC +AGN++A Y+LGMIRFYCLQN  SGASLMAKAAI+SHAPALYSL+VI
Sbjct: 82  WSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYSLSVI 141

Query: 172 QFNGSGGSKTDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNVTEGRRFLVQA 231
           QFNGSGGSKTDK+LRAGVALCAR+A+LGHVDALRELGHCLQDGYGV ++V+EGRR L+QA
Sbjct: 142 QFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSEGRRLLIQA 201

Query: 232 NARELAAVLSSDASSSVIATRSCLTWDSRASHRHVTGTVCPLLSDFGCNIPAPEAHPASQ 291
           NARELA  L S  S                     +G     L+D    +P  E HP ++
Sbjct: 202 NARELACSLRSYLSLK-------------------SGDENETLTDLSV-VPVQEIHPVNR 261

Query: 292 FLAEWFAARGGSPGNGLRLCSHVGCGRPESRRHEFRRCSVCGAVNYCSRACQALDWKLRH 351
           FL EWF++       GLR+CSH GCGRPE+R HEFRRCSVCG VNYCSR CQALDW+ +H
Sbjct: 262 FLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALDWRAKH 321

Query: 352 KMDCAPVERW------LDDNGDGVA 371
           K++C P++ W      + D+G+ VA
Sbjct: 322 KVECTPLDLWVAAAAEIGDDGEAVA 326

[Close]

BLAST of Sed0017688 vs. TAIR 10
Match: AT1G17110.1 (ubiquitin-specific protease 15 )

HSP 1 Score: 47.0 bits (110), Expect = 4.0e-05
Identity = 17/32 (53.12%), Postives = 22/32 (68.75%), Query Frame = 0


Query: 328 RCSVCGAVNYCSRACQALDWKLRHKMDCAPVE 360
           RCS C +V YCS  CQ + W++ HK +C PVE
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of Sed0017688 vs. TAIR 10
Match: AT1G17110.2 (ubiquitin-specific protease 15 )

HSP 1 Score: 47.0 bits (110), Expect = 4.0e-05
Identity = 17/32 (53.12%), Postives = 22/32 (68.75%), Query Frame = 0


Query: 328 RCSVCGAVNYCSRACQALDWKLRHKMDCAPVE 360
           RCS C +V YCS  CQ + W++ HK +C PVE
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of Sed0017688 vs. TAIR 10
Match: AT2G24640.1 (ubiquitin-specific protease 19 )

HSP 1 Score: 44.3 bits (103), Expect = 2.6e-04
Identity = 16/29 (55.17%), Postives = 20/29 (68.97%), Query Frame = 0


Query: 327 RRCSVCGAVNYCSRACQALDWKLRHKMDC 356
           ++CS C +V YCS ACQ  DWK  HK+ C
Sbjct: 73  KKCSRCKSVRYCSAACQTSDWKSGHKLKC 101

The following BLAST results are available for this feature:

BLAST of Sed0017688 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601598.1	2.9e-183	83.38	F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7034708.1	1.1e-182	83.38	F-box protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022957417.1	2.1e-181	83.07	F-box protein At1g67340 [Cucurbita moschata]	[more]
XP_004135325.1	1.0e-180	83.29	F-box protein At1g67340 [Cucumis sativus] >KGN51672.1 hypothetical protein Csa_0...	[more]
XP_022998094.1	1.3e-180	83.03	F-box protein At1g67340 [Cucurbita maxima]	[more]

BLAST of Sed0017688 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYF9	5.9e-139	73.55	F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1	[more]
Q9FK27	7.6e-110	61.54	F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1	[more]
Q2YDC9	1.5e-04	40.74	Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1	[more]
Q9FPS9	5.6e-04	53.13	Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana OX=3702 GN=UBP1...	[more]

BLAST of Sed0017688 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GZ25	1.0e-181	83.07	F-box protein At1g67340 OS=Cucurbita moschata OX=3662 GN=LOC111458825 PE=4 SV=1	[more]
A0A0A0KTC5	5.0e-181	83.29	MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G589890 P...	[more]
A0A6J1KDE5	6.5e-181	83.03	F-box protein At1g67340 OS=Cucurbita maxima OX=3661 GN=LOC111492842 PE=4 SV=1	[more]
A0A6J1HSL8	7.9e-179	83.16	F-box protein At1g67340-like OS=Cucurbita maxima OX=3661 GN=LOC111466400 PE=4 SV...	[more]
A0A6J1FZ36	1.5e-177	82.34	F-box protein At1g67340-like OS=Cucurbita moschata OX=3662 GN=LOC111449223 PE=4 ...	[more]

BLAST of Sed0017688 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67340.1	4.2e-140	73.55	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT5G50450.1	5.4e-111	61.54	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT1G17110.1	4.0e-05	53.13	ubiquitin-specific protease 15	[more]
AT1G17110.2	4.0e-05	53.13	ubiquitin-specific protease 15	[more]
AT2G24640.1	2.6e-04	55.17	ubiquitin-specific protease 19	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	6.10.140.2220		coord: 303..359 e-value: 1.1E-10 score: 42.9
None	No IPR available	PANTHER	PTHR46758:SF2	OSJNBA0044M19.1 PROTEIN	coord: 1..372
None	No IPR available	SUPERFAMILY	144232	HIT/MYND zinc finger-like	coord: 309..360
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 113..231
IPR002893	Zinc finger, MYND-type	PFAM	PF01753	zf-MYND	coord: 316..355 e-value: 1.1E-7 score: 31.9
IPR002893	Zinc finger, MYND-type	PROSITE	PS50865	ZF_MYND_2	coord: 313..355 score: 10.842163
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 95..251 e-value: 1.9E-18 score: 69.2
IPR044508	F-box protein At5g50450/At1g67340-like	PANTHER	PTHR46758	MYND DOMAIN-CONTAINING	coord: 1..372
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 49..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017688.1	Sed0017688.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006414	translational elongation
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003746	translation elongation factor activity