
Sed0017680 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGAGAGCTTTGAGTACCAGGAGATGTCCTCACAGGTATGAGTATCTCATGGAGGATCCTACAGTTAGCCTGTTGGAAGGCCGGCTGAAGAGGACGACCAGTTTGCCAACCATAGTACTCGGGTCAGGATCGAGGAAACCGACATCTGCTGAGCTTGCTCAAGCAAAGCTGCAGTCAAAGAAAGCTAGTAAAGGGCATGGTATTTTTAGTTTCTTTGATATTCGTCGCAAGAGGAAGTCGACGGCCAAGCCTGAATTCGCAAGGTATCTAGAGTATGTGAAGGAGGGAGGGCTGTGGGATTTGAAAGCAAATGCTCCTGTAATCTACTATAAATGA ATGTTGAGAGCTTTGAGTACCAGGAGATGTCCTCACAGGTATGAGTATCTCATGGAGGATCCTACAGTTAGCCTGTTGGAAGGCCGGCTGAAGAGGACGACCAGTTTGCCAACCATAGTACTCGGGTCAGGATCGAGGAAACCGACATCTGCTGAGCTTGCTCAAGCAAAGCTGCAGTCAAAGAAAGCTAGTAAAGGGCATGGTATTTTTAGTTTCTTTGATATTCGTCGCAAGAGGAAGTCGACGGCCAAGCCTGAATTCGCAAGGTATCTAGAGTATGTGAAGGAGGGAGGGCTGTGGGATTTGAAAGCAAATGCTCCTGTAATCTACTATAAATGA ATGTTGAGAGCTTTGAGTACCAGGAGATGTCCTCACAGGTATGAGTATCTCATGGAGGATCCTACAGTTAGCCTGTTGGAAGGCCGGCTGAAGAGGACGACCAGTTTGCCAACCATAGTACTCGGGTCAGGATCGAGGAAACCGACATCTGCTGAGCTTGCTCAAGCAAAGCTGCAGTCAAAGAAAGCTAGTAAAGGGCATGGTATTTTTAGTTTCTTTGATATTCGTCGCAAGAGGAAGTCGACGGCCAAGCCTGAATTCGCAAGGTATCTAGAGTATGTGAAGGAGGGAGGGCTGTGGGATTTGAAAGCAAATGCTCCTGTAATCTACTATAAATGA MLRALSTRRCPHRYEYLMEDPTVSLLEGRLKRTTSLPTIVLGSGSRKPTSAELAQAKLQSKKASKGHGIFSFFDIRRKRKSTAKPEFARYLEYVKEGGLWDLKANAPVIYYK Homology
BLAST of Sed0017680 vs. NCBI nr
Match: KAG6594817.1 (Auxilin-like protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 208.8 bits (530), Expect = 2.5e-50 Identity = 104/113 (92.04%), Postives = 109/113 (96.46%), Query Frame = 0
BLAST of Sed0017680 vs. NCBI nr
Match: KAG7026782.1 (hypothetical protein SDJN02_10789, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 208.8 bits (530), Expect = 2.5e-50 Identity = 104/113 (92.04%), Postives = 109/113 (96.46%), Query Frame = 0
BLAST of Sed0017680 vs. NCBI nr
Match: XP_023003965.1 (uncharacterized protein LOC111497412 [Cucurbita maxima]) HSP 1 Score: 191.4 bits (485), Expect = 4.1e-45 Identity = 96/109 (88.07%), Postives = 101/109 (92.66%), Query Frame = 0
BLAST of Sed0017680 vs. NCBI nr
Match: XP_011658493.1 (uncharacterized protein LOC105436031 [Cucumis sativus]) HSP 1 Score: 183.3 bits (464), Expect = 1.1e-42 Identity = 97/118 (82.20%), Postives = 103/118 (87.29%), Query Frame = 0
BLAST of Sed0017680 vs. NCBI nr
Match: XP_038883128.1 (uncharacterized protein LOC120074173 [Benincasa hispida]) HSP 1 Score: 180.6 bits (457), Expect = 7.3e-42 Identity = 97/118 (82.20%), Postives = 103/118 (87.29%), Query Frame = 0
BLAST of Sed0017680 vs. ExPASy TrEMBL
Match: A0A6J1KT92 (uncharacterized protein LOC111497412 OS=Cucurbita maxima OX=3661 GN=LOC111497412 PE=4 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 2.0e-45 Identity = 96/109 (88.07%), Postives = 101/109 (92.66%), Query Frame = 0
BLAST of Sed0017680 vs. ExPASy TrEMBL
Match: A0A0A0KKF4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502830 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 5.4e-43 Identity = 97/118 (82.20%), Postives = 103/118 (87.29%), Query Frame = 0
BLAST of Sed0017680 vs. ExPASy TrEMBL
Match: A0A6J1BSU6 (uncharacterized protein LOC111005403 OS=Momordica charantia OX=3673 GN=LOC111005403 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 7.8e-42 Identity = 95/117 (81.20%), Postives = 99/117 (84.62%), Query Frame = 0
BLAST of Sed0017680 vs. ExPASy TrEMBL
Match: A0A1S3B2K9 (uncharacterized protein LOC103485064 OS=Cucumis melo OX=3656 GN=LOC103485064 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 3.0e-41 Identity = 93/118 (78.81%), Postives = 103/118 (87.29%), Query Frame = 0
BLAST of Sed0017680 vs. ExPASy TrEMBL
Match: A0A6J1ILF9 (uncharacterized protein LOC111478516 OS=Cucurbita maxima OX=3661 GN=LOC111478516 PE=4 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.6e-39 Identity = 90/115 (78.26%), Postives = 97/115 (84.35%), Query Frame = 0
BLAST of Sed0017680 vs. TAIR 10
Match: AT4G36500.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G18210.1); Has 50 Blast hits to 50 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 102.1 bits (253), Expect = 3.1e-22 Identity = 59/120 (49.17%), Postives = 79/120 (65.83%), Query Frame = 0
BLAST of Sed0017680 vs. TAIR 10
Match: AT2G18210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G36500.1); Has 50 Blast hits to 50 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 87.8 bits (216), Expect = 6.0e-18 Identity = 58/126 (46.03%), Postives = 76/126 (60.32%), Query Frame = 0
BLAST of Sed0017680 vs. TAIR 10
Match: AT3G50900.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66490.1); Has 45 Blast hits to 45 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 87.8 bits (216), Expect = 6.0e-18 Identity = 53/122 (43.44%), Postives = 71/122 (58.20%), Query Frame = 0
BLAST of Sed0017680 vs. TAIR 10
Match: AT5G66490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 77.0 bits (188), Expect = 1.1e-14 Identity = 51/120 (42.50%), Postives = 65/120 (54.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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