Sed0017664 (gene) Chayote v1

Overview


Name	Sed0017664
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RPA-interacting protein
Location	LG08: 39540858 .. 39543936 (-)
RNA-Seq Expression	Sed0017664
Synteny	Sed0017664

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTAAAACGGCGAATAACTCCGACCATTCACGAGTTGAGGGCAAATTTCAGCATCGCAATTGATAAGAAACAGTGAAAATGGAAGAGAAGGATCCAAATTCCGATATTCAAACTCGCCGATCTTCGATTAAGGTCCATCCTCGTTACAACAATCACCAATCATGGAAGCAGAAGGTGAAATTTCTCTATTTCTCGATGCCTCAGTTTTGTGTTTTTGGCCGGTTTTTGATATGATCAATTAGAAGAACAATAACGACAATTTATTCGTTGATTTTACTGTGAATAGTTGAGAGAGAACTGTTGCAAAAGGGTCAGAGAAGGAAGAAGCCGCTTGCTCTGGAAGATTAGGTTGCCTTCTTATCCCAATCCTCTCGATGATCGGCAGCAGGTCAATTTTTAAGAATATTTTTGTCATTTTTAGAAATTTTTCTGTTTAGTTATGGCAATGGATTTTAACAATTTGGTGTTGGGTGTTGTGATGAATGCCATGATTGTTGTTGTTGCTTTTGGTTTTCTTGTATTACTTGCCACTGGATCTTGATGTCTGTTTATGTGTTTTTTGCGGTCTTTCTTCACTCTTTAGATAAGTTTTTTAATATCCGTGAGTATTTGGATAAGCTTACGCATAGCTGGATTATTCTCACGAGTTATAGTGTCTCACTCTACAATGGCCAAAGAAATTTATTACCCTTTTGGATTTTTTGTTGGTTGTAGGTTTTGATCAAAACTGCTTTTCAAGACATCTTTACTGATGAGCTGAAAAAGATGAAGGACCAATCTGTGAATGACTTCGGTAAGAATTTACCATCTGCCCCGGGATCGGATGATGTTCTTTGGGAATATGAGGGGTTTCAGGATGCTTATGATGGTGAAGGGGAAGGTGAAGGTGAAGAAATATTGTTGGAAATGCAAAGGATTTTTTATGAGGATCTGAATGTTGATCTGAAGCAAAAAGGTGATTTTGCTGGCACCATTTTATTTTTCAAAGTTCATTAGCTTCTCTGATTGTCTGTAAGCTGTTGATATATCTTCTGATTTTGGGTTGAAAAATACCATCCTGATCCTCCTACAACAATTGGGGAAAAGAATTTAGTAGCAGTGAGCAGGTTATGTTTTCCAAAGAATAAATGATTTGTTATGCCTCATGCAAACTCAATTTAATTATTCTGTTTTATGGTTAAGTTCACGCAGTGCAGCAATTATTCAAAGTTAAGTAATAATTAACTGACCACCTAATTTCATATTTATAATGAAATTGTTCTTATCCAAAAAAAAAAAAAAAAAACTAATGCTATTGTTGTCATCTGTTCTCTTATTTTATTTATGTAACTGCAGGTTCTGTTATAATAGATGGTAATCGATCTTCTCTTTTAGTTTCTAAGTTGTTAAAATCACTATTTTGAGTAGGATGTTTACTCAGCTCTTTGCAGAATCTGAAGGCCCTATCGTAACATGGGAAGATGAAGAAGACGAGTTCTTAGCTCGTGCAGTTTATGAACATATGCAACTGAACAGTGAGAAGGTTAGTTTTCATCTTCACTTTTGAGGGATGTACACACATAAGTGTGTGAAACAACTGAATCTGAGAATCTTGTTGTGTATCTTCTACTAAGAGTAATCAACTTGAAAGTTTGAATGCCTTTAGGCATTCTTGTTTGTCAGATCTTACATTTACATTTGTAAAGCATGATTTGTTCTTCATACAATCAAAAGCATACAATTCCTTTTTAACCATTTTGAATGTGATGTTAGGTTCTTGAGAAGTTCTGGTGTCCTATTTGTAAACAAGGAGAGCTGCAAGAGAACAAACACTCCATACATTGCACTCATTGTGGTCTTCAGCTTAAGAAAGGCAATGAGGTTTTCCTCTAATTTGATCTTAAGACCTTATAGTTAACTATCCTCTTCTTAATCCCACCTGTTATTCCCTGGTCCTTATTAAGATATTGATGATTTTACTATTACCCGATCTTGATTAAGTACGCTCGTGACAATATTTATCATGTTGACTGAGATATTTAGAAATTATTGGGTGCCTTCTTATAAGCATGCATATTCTTGTGATATTATATTATGGTGATAGCGCTTAAGAAATCCTCATGAATTGGCTTAGTTACATTACAGGTTCAATCCATGGTTTTTTTTTTTTGAAACAAAGGTTCAATCCATGGTATTCACGTACCTAAGAATGAATTTGCTACAAATATTTTTTACAGCCAAATATTGTAAGATTAGACAATCTGTCATGTGAGAATAGAAAAAATGTGCACAACCAGCTCAGATACTCAAAGATATTAAAATTAGAAAAGGAAAAAAAGAATAGGGATTAAAATATAAAAGTACAAGCTGAATATTTGCCTGTTTTTATGATATAATTAGTGGTTGTTTTTCAGTAACATGTCAGATTATACCAACAAGAGCATTGCATAGCTCAAGTGGCATGATCATAGGTTCAAAGCCCAGATCTCCGAATATTATGATATATGTTCTGATGATAGGGCTTAAGATGTTAAATCATATTCATACATCAAAGAAATCGTTTCTTATTAAAAAAAAATGTAAACACAATAATAATAATAATAATAAATACATACAACAAAGGACAGAAAAATTAAAACAAATAACATCTATAGAAGCTACAGTGATGTTATAATGCTCATGTCTGGTCGAATTAGACAATGCTCATGTCTGGAATTGAATAACTTGTCCAATATCACATGCCAAAAAAAAAATTCACAGATGTACGAATCTCGACATGCTTTAAACGAGATTAATTATGAAATAGCTATTGTTAGCTTAGTCTTTTATTACTAGTCCTATGTCCTTTCAGGTTACTCTGGACCTCCTCCATTCTCGGTTGGCTGCTGTGCATGCCGAACATCTCGACCGGGGTTGCAGATTGAAGCCAATGTTTTGTGTTGAGAGTAGATTTAACATTACCGCATTATACATCTCTTGTAAAGGTTGCAACACATTTGAGGTTGTAATATAGCATTGTTAAGAATCAGATTTCACAAATTTTGTGATTAAAATCATTAATTTTAGCTTATGACAGGAAGATGATTTACATAAGTGTGGT

mRNA sequence

ACTAAAACGGCGAATAACTCCGACCATTCACGAGTTGAGGGCAAATTTCAGCATCGCAATTGATAAGAAACAGTGAAAATGGAAGAGAAGGATCCAAATTCCGATATTCAAACTCGCCGATCTTCGATTAAGGTCCATCCTCGTTACAACAATCACCAATCATGGAAGCAGAAGTTGAGAGAGAACTGTTGCAAAAGGGTCAGAGAAGGAAGAAGCCGCTTGCTCTGGAAGATTAGGTTGCCTTCTTATCCCAATCCTCTCGATGATCGGCAGCAGGTTTTGATCAAAACTGCTTTTCAAGACATCTTTACTGATGAGCTGAAAAAGATGAAGGACCAATCTGTGAATGACTTCGGTAAGAATTTACCATCTGCCCCGGGATCGGATGATGTTCTTTGGGAATATGAGGGGTTTCAGGATGCTTATGATGGTGAAGGGGAAGGTGAAGGTGAAGAAATATTGTTGGAAATGCAAAGGATTTTTTATGAGGATCTGAATGTTGATCTGAAGCAAAAAGAATCTGAAGGCCCTATCGTAACATGGGAAGATGAAGAAGACGAGTTCTTAGCTCGTGCAGTTTATGAACATATGCAACTGAACAGTGAGAAGGTTCTTGAGAAGTTCTGGTGTCCTATTTGTAAACAAGGAGAGCTGCAAGAGAACAAACACTCCATACATTGCACTCATTGTGGTCTTCAGCTTAAGAAAGGCAATGAGGTTACTCTGGACCTCCTCCATTCTCGGTTGGCTGCTGTGCATGCCGAACATCTCGACCGGGGTTGCAGATTGAAGCCAATGTTTTGTGTTGAGAGTAGATTTAACATTACCGCATTATACATCTCTTGTAAAGGTTGCAACACATTTGAGGTTGTAATATAGCATTGTTAAGAATCAGATTTCACAAATTTTGTGATTAAAATCATTAATTTTAGCTTATGACAGGAAGATGATTTACATAAGTGTGGT

Coding sequence (CDS)

ATGGAAGAGAAGGATCCAAATTCCGATATTCAAACTCGCCGATCTTCGATTAAGGTCCATCCTCGTTACAACAATCACCAATCATGGAAGCAGAAGTTGAGAGAGAACTGTTGCAAAAGGGTCAGAGAAGGAAGAAGCCGCTTGCTCTGGAAGATTAGGTTGCCTTCTTATCCCAATCCTCTCGATGATCGGCAGCAGGTTTTGATCAAAACTGCTTTTCAAGACATCTTTACTGATGAGCTGAAAAAGATGAAGGACCAATCTGTGAATGACTTCGGTAAGAATTTACCATCTGCCCCGGGATCGGATGATGTTCTTTGGGAATATGAGGGGTTTCAGGATGCTTATGATGGTGAAGGGGAAGGTGAAGGTGAAGAAATATTGTTGGAAATGCAAAGGATTTTTTATGAGGATCTGAATGTTGATCTGAAGCAAAAAGAATCTGAAGGCCCTATCGTAACATGGGAAGATGAAGAAGACGAGTTCTTAGCTCGTGCAGTTTATGAACATATGCAACTGAACAGTGAGAAGGTTCTTGAGAAGTTCTGGTGTCCTATTTGTAAACAAGGAGAGCTGCAAGAGAACAAACACTCCATACATTGCACTCATTGTGGTCTTCAGCTTAAGAAAGGCAATGAGGTTACTCTGGACCTCCTCCATTCTCGGTTGGCTGCTGTGCATGCCGAACATCTCGACCGGGGTTGCAGATTGAAGCCAATGTTTTGTGTTGAGAGTAGATTTAACATTACCGCATTATACATCTCTTGTAAAGGTTGCAACACATTTGAGGTTGTAATATAG

Protein sequence

MEEKDPNSDIQTRRSSIKVHPRYNNHQSWKQKLRENCCKRVREGRSRLLWKIRLPSYPNPLDDRQQVLIKTAFQDIFTDELKKMKDQSVNDFGKNLPSAPGSDDVLWEYEGFQDAYDGEGEGEGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEEDEFLARAVYEHMQLNSEKVLEKFWCPICKQGELQENKHSIHCTHCGLQLKKGNEVTLDLLHSRLAAVHAEHLDRGCRLKPMFCVESRFNITALYISCKGCNTFEVVI

Homology

[Close]

BLAST of Sed0017664 vs. NCBI nr
Match: XP_023541291.1 (uncharacterized protein LOC111801509 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 461.5 bits (1186), Expect = 5.1e-126
Identity = 223/266 (83.83%), Postives = 239/266 (89.85%), Query Frame = 0


Query: 1   MEEKDPNSDIQTRRSSIKVHPRYNNHQSWKQKLRENCCKRVREGRSRLLWKIRLPSYPNP 60
           MEEKDP+S  QT RSSIK HPRYNNHQSWK+KLRENCCKRVREGR+RLLWK+R P Y + 
Sbjct: 1   MEEKDPDSVTQTHRSSIKTHPRYNNHQSWKEKLRENCCKRVREGRNRLLWKMRSPGYLHS 60

Query: 61  LDDRQQVLIKTAFQDIFTDELKKMKDQSVNDFGKNLPSAPGSDDVLWEYEGFQDAYDGEG 120
           LDDRQQ  I+++FQDIF+DELKK+KD++ N+  KNL SAP SDDVLWEYEG  DAY    
Sbjct: 61  LDDRQQDFIRSSFQDIFSDELKKIKDEAENECYKNLTSAPESDDVLWEYEGLHDAYG--- 120

Query: 121 EGEGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEEDEFLARAVYEHMQLNSEKVLE 180
            GEGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEEDEFLARAVYEHMQLNSEKVLE
Sbjct: 121 -GEGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEEDEFLARAVYEHMQLNSEKVLE 180

Query: 181 KFWCPICKQGELQENKHSIHCTHCGLQLKKGNEVTLDLLHSRLAAVHAEHLDRGCRLKPM 240
           K WCPICKQG+LQENKH IHCTHCG+QL KGNEVTLDLL SRLA VHAEHLDRGCRLKPM
Sbjct: 181 KLWCPICKQGDLQENKHFIHCTHCGVQLNKGNEVTLDLLRSRLADVHAEHLDRGCRLKPM 240

Query: 241 FCVESRFNITALYISCKGCNTFEVVI 267
           FC+ESRFNITALYISCKGCNTFEVVI
Sbjct: 241 FCIESRFNITALYISCKGCNTFEVVI 262

[Close]

BLAST of Sed0017664 vs. NCBI nr
Match: XP_038893884.1 (uncharacterized protein LOC120082685 isoform X1 [Benincasa hispida])

HSP 1 Score: 460.7 bits (1184), Expect = 8.6e-126
Identity = 225/270 (83.33%), Postives = 241/270 (89.26%), Query Frame = 0


Query: 1   MEEKDPNSDIQTRRSSIKVHPRYNNHQSWKQKLRENCCKRVREGRSRLLWKIRL----PS 60
           ME+ DPNS IQT RSSIK HPRYNN QSWKQKLRENCCKRVREGRSRLLWK+RL    PS
Sbjct: 1   MEDDDPNSVIQTHRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMTSPS 60

Query: 61  YPNPLDDRQQVLIKTAFQDIFTDELKKMKDQSVNDFGKNLPSAPGSDDVLWEYEGFQDAY 120
           YP+ L++RQQ  IK+AFQDIF+DELKK+KDQSVND+ KNLPS P + DVLWEYEG QDAY
Sbjct: 61  YPHSLNNRQQDFIKSAFQDIFSDELKKIKDQSVNDYNKNLPSVPEAADVLWEYEGVQDAY 120

Query: 121 DGEGEGEGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEEDEFLARAVYEHMQLNSE 180
               EGEGEEILLEMQRIFYEDLN+DL+ KESEGPIVTWEDEEDEFLARAVYEHM+LNSE
Sbjct: 121 ----EGEGEEILLEMQRIFYEDLNIDLRYKESEGPIVTWEDEEDEFLARAVYEHMELNSE 180

Query: 181 KVLEKFWCPICKQGELQENKHSIHCTHCGLQLKKGNEVTLDLLHSRLAAVHAEHLDRGCR 240
           KVLEKFWCPICKQGELQEN H IHCTHCGL+L KGNEVTLDLL  RLA VHAEHLDRGCR
Sbjct: 181 KVLEKFWCPICKQGELQENNHFIHCTHCGLRLTKGNEVTLDLLRCRLADVHAEHLDRGCR 240

Query: 241 LKPMFCVESRFNITALYISCKGCNTFEVVI 267
           LKP FCVES+FNITALYISC+GCNTFEVVI
Sbjct: 241 LKPNFCVESKFNITALYISCEGCNTFEVVI 266

[Close]

BLAST of Sed0017664 vs. NCBI nr
Match: XP_022955133.1 (uncharacterized protein LOC111457192 isoform X1 [Cucurbita moschata])

HSP 1 Score: 457.2 bits (1175), Expect = 9.6e-125
Identity = 221/266 (83.08%), Postives = 238/266 (89.47%), Query Frame = 0


Query: 1   MEEKDPNSDIQTRRSSIKVHPRYNNHQSWKQKLRENCCKRVREGRSRLLWKIRLPSYPNP 60
           MEEKDP+S  QT RSSIK HPRYNNHQSWK+KLRENCCKRVREGR+RLLWK+R P Y + 
Sbjct: 1   MEEKDPDSVTQTHRSSIKTHPRYNNHQSWKEKLRENCCKRVREGRNRLLWKMRSPGYLHS 60

Query: 61  LDDRQQVLIKTAFQDIFTDELKKMKDQSVNDFGKNLPSAPGSDDVLWEYEGFQDAYDGEG 120
           LDDRQQ  I+++FQDIF+DELKK+KD++ N+  KNLPSAP SDDVLWEYEG  DAY    
Sbjct: 61  LDDRQQDFIRSSFQDIFSDELKKIKDEAENECYKNLPSAPESDDVLWEYEGLHDAYG--- 120

Query: 121 EGEGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEEDEFLARAVYEHMQLNSEKVLE 180
            GEGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEEDEFLARAVYEHMQLNSEK L 
Sbjct: 121 -GEGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEEDEFLARAVYEHMQLNSEKDLG 180

Query: 181 KFWCPICKQGELQENKHSIHCTHCGLQLKKGNEVTLDLLHSRLAAVHAEHLDRGCRLKPM 240
           K WCPICKQG+LQENKH IHCTHCG+QL KGNEVTLDLL SRLA VHAEHLDRGCRL+PM
Sbjct: 181 KLWCPICKQGDLQENKHFIHCTHCGVQLNKGNEVTLDLLRSRLADVHAEHLDRGCRLRPM 240

Query: 241 FCVESRFNITALYISCKGCNTFEVVI 267
           FCVESRFNITALYISCKGCNTFEVV+
Sbjct: 241 FCVESRFNITALYISCKGCNTFEVVM 262

[Close]

BLAST of Sed0017664 vs. NCBI nr
Match: KAG7012195.1 (hypothetical protein SDJN02_24947 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 454.1 bits (1167), Expect = 8.1e-124
Identity = 220/264 (83.33%), Postives = 235/264 (89.02%), Query Frame = 0


Query: 1   MEEKDPNSDIQTRRSSIKVHPRYNNHQSWKQKLRENCCKRVREGRSRLLWKIRLPSYPNP 60
           MEEKDP+S  QT RSSIK HPRYNNHQSWK+KLRENCCKRVREGR+RLLWK+R P Y + 
Sbjct: 1   MEEKDPDSVTQTHRSSIKTHPRYNNHQSWKEKLRENCCKRVREGRNRLLWKMRSPGYFHS 60

Query: 61  LDDRQQVLIKTAFQDIFTDELKKMKDQSVNDFGKNLPSAPGSDDVLWEYEGFQDAYDGEG 120
           LDDRQQ  I+++FQDIF+DELKK+KD++ N+  KNLPSAP SDDVLWEYEG  DAY    
Sbjct: 61  LDDRQQDFIRSSFQDIFSDELKKIKDEAENECYKNLPSAPESDDVLWEYEGLHDAYG--- 120

Query: 121 EGEGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEEDEFLARAVYEHMQLNSEKVLE 180
            GEGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEEDEFLARAVYEHMQLNSEK L 
Sbjct: 121 -GEGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEEDEFLARAVYEHMQLNSEKDLG 180

Query: 181 KFWCPICKQGELQENKHSIHCTHCGLQLKKGNEVTLDLLHSRLAAVHAEHLDRGCRLKPM 240
           K WCPICKQG+LQENKH IHCTHCG+QL KGNEVTLDLL  RLA VHAEHLDRGCRLKPM
Sbjct: 181 KLWCPICKQGDLQENKHFIHCTHCGVQLNKGNEVTLDLLRFRLADVHAEHLDRGCRLKPM 240

Query: 241 FCVESRFNITALYISCKGCNTFEV 265
           FCVESRFNITALYISCKGCNTFEV
Sbjct: 241 FCVESRFNITALYISCKGCNTFEV 260

[Close]

BLAST of Sed0017664 vs. NCBI nr
Match: KAG6573010.1 (hypothetical protein SDJN03_26897, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 453.0 bits (1164), Expect = 1.8e-123
Identity = 219/262 (83.59%), Postives = 234/262 (89.31%), Query Frame = 0


Query: 3   EKDPNSDIQTRRSSIKVHPRYNNHQSWKQKLRENCCKRVREGRSRLLWKIRLPSYPNPLD 62
           EKDP+S  QT RSSIK HPRYNNHQSWK+KLRENCCKRVREGR+RLLWK+R P Y + LD
Sbjct: 2   EKDPDSVTQTHRSSIKTHPRYNNHQSWKEKLRENCCKRVREGRNRLLWKMRSPGYLHSLD 61

Query: 63  DRQQVLIKTAFQDIFTDELKKMKDQSVNDFGKNLPSAPGSDDVLWEYEGFQDAYDGEGEG 122
           DRQQ  I+++FQDIF+DELKK+KD++ N+  KNLPSAP SDDVLWEYEG  DAY     G
Sbjct: 62  DRQQDFIRSSFQDIFSDELKKIKDEAENECYKNLPSAPESDDVLWEYEGLHDAYG----G 121

Query: 123 EGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEEDEFLARAVYEHMQLNSEKVLEKF 182
           EGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEEDEFLARAVYEHMQLNSEK L K 
Sbjct: 122 EGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEEDEFLARAVYEHMQLNSEKDLGKL 181

Query: 183 WCPICKQGELQENKHSIHCTHCGLQLKKGNEVTLDLLHSRLAAVHAEHLDRGCRLKPMFC 242
           WCPICKQG+LQENKH IHCTHCG+QL KGNEVTLDLL SRLA VHAEHLDRGCRLKPMFC
Sbjct: 182 WCPICKQGDLQENKHFIHCTHCGVQLNKGNEVTLDLLRSRLADVHAEHLDRGCRLKPMFC 241

Query: 243 VESRFNITALYISCKGCNTFEV 265
           VESRFNITALYISCKGCNTFEV
Sbjct: 242 VESRFNITALYISCKGCNTFEV 259

[Close]

BLAST of Sed0017664 vs. ExPASy TrEMBL
Match: A0A6J1GT42 (uncharacterized protein LOC111457192 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457192 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 4.6e-125
Identity = 221/266 (83.08%), Postives = 238/266 (89.47%), Query Frame = 0


Query: 1   MEEKDPNSDIQTRRSSIKVHPRYNNHQSWKQKLRENCCKRVREGRSRLLWKIRLPSYPNP 60
           MEEKDP+S  QT RSSIK HPRYNNHQSWK+KLRENCCKRVREGR+RLLWK+R P Y + 
Sbjct: 1   MEEKDPDSVTQTHRSSIKTHPRYNNHQSWKEKLRENCCKRVREGRNRLLWKMRSPGYLHS 60

Query: 61  LDDRQQVLIKTAFQDIFTDELKKMKDQSVNDFGKNLPSAPGSDDVLWEYEGFQDAYDGEG 120
           LDDRQQ  I+++FQDIF+DELKK+KD++ N+  KNLPSAP SDDVLWEYEG  DAY    
Sbjct: 61  LDDRQQDFIRSSFQDIFSDELKKIKDEAENECYKNLPSAPESDDVLWEYEGLHDAYG--- 120

Query: 121 EGEGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEEDEFLARAVYEHMQLNSEKVLE 180
            GEGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEEDEFLARAVYEHMQLNSEK L 
Sbjct: 121 -GEGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEEDEFLARAVYEHMQLNSEKDLG 180

Query: 181 KFWCPICKQGELQENKHSIHCTHCGLQLKKGNEVTLDLLHSRLAAVHAEHLDRGCRLKPM 240
           K WCPICKQG+LQENKH IHCTHCG+QL KGNEVTLDLL SRLA VHAEHLDRGCRL+PM
Sbjct: 181 KLWCPICKQGDLQENKHFIHCTHCGVQLNKGNEVTLDLLRSRLADVHAEHLDRGCRLRPM 240

Query: 241 FCVESRFNITALYISCKGCNTFEVVI 267
           FCVESRFNITALYISCKGCNTFEVV+
Sbjct: 241 FCVESRFNITALYISCKGCNTFEVVM 262

[Close]

BLAST of Sed0017664 vs. ExPASy TrEMBL
Match: A0A1S3AU18 (uncharacterized protein LOC103482820 OS=Cucumis melo OX=3656 GN=LOC103482820 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 4.3e-123
Identity = 218/270 (80.74%), Postives = 240/270 (88.89%), Query Frame = 0


Query: 1   MEEKDPNSDIQTRRSSIKVHPRYNNHQSWKQKLRENCCKRVREGRSRLLWKIRL----PS 60
           ME+ +PN  IQTRRSSIK HPRYNN QSWKQKLRENCCKRVREGRSRLLWK+RL    P+
Sbjct: 1   MEDDNPNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT 60

Query: 61  YPNPLDDRQQVLIKTAFQDIFTDELKKMKDQSVNDFGKNLPSAPGSDDVLWEYEGFQDAY 120
           YP+ L++RQQ  IK+AFQDIF+DELKK+KD+SVNDF +NLPS P + DVLWEYEG  DAY
Sbjct: 61  YPHSLNNRQQDFIKSAFQDIFSDELKKIKDESVNDFNENLPSVPEAADVLWEYEGIHDAY 120

Query: 121 DGEGEGEGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEEDEFLARAVYEHMQLNSE 180
               EG+GEEILLEMQRIFYEDLNVD++QKESEGPIVTWEDEEDEFLARAVYEHMQL++E
Sbjct: 121 ----EGDGEEILLEMQRIFYEDLNVDMRQKESEGPIVTWEDEEDEFLARAVYEHMQLSNE 180

Query: 181 KVLEKFWCPICKQGELQENKHSIHCTHCGLQLKKGNEVTLDLLHSRLAAVHAEHLDRGCR 240
           K+LEKFWCP+CKQGELQEN H IHCT CGL+L KGNEVTLDLL  RLA VHAEHLDRGCR
Sbjct: 181 KILEKFWCPMCKQGELQENSHFIHCTQCGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCR 240

Query: 241 LKPMFCVESRFNITALYISCKGCNTFEVVI 267
           LKP FCVESRFNITALYISC+GCNTFEVVI
Sbjct: 241 LKPKFCVESRFNITALYISCEGCNTFEVVI 266

[Close]

BLAST of Sed0017664 vs. ExPASy TrEMBL
Match: A0A6J1JWH1 (uncharacterized protein LOC111490304 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490304 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 7.4e-123
Identity = 218/266 (81.95%), Postives = 235/266 (88.35%), Query Frame = 0


Query: 1   MEEKDPNSDIQTRRSSIKVHPRYNNHQSWKQKLRENCCKRVREGRSRLLWKIRLPSYPNP 60
           MEEKDP+S  QT RSSIK HPRYNNHQSWK+KL+ENCCKRVREGR+RLLWK+R P Y + 
Sbjct: 1   MEEKDPDSVTQTHRSSIKTHPRYNNHQSWKEKLKENCCKRVREGRNRLLWKMRSPGYLHS 60

Query: 61  LDDRQQVLIKTAFQDIFTDELKKMKDQSVNDFGKNLPSAPGSDDVLWEYEGFQDAYDGEG 120
           LDDRQQ  I+++FQDIF+DELKK+KD++ N+  KNL SAP SDD LWEYEG  DAY    
Sbjct: 61  LDDRQQDFIRSSFQDIFSDELKKIKDEAENECYKNLTSAPESDDALWEYEGLHDAY---- 120

Query: 121 EGEGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEEDEFLARAVYEHMQLNSEKVLE 180
            GEGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEED+FLARAVYEHMQLNSEK L 
Sbjct: 121 AGEGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEEDKFLARAVYEHMQLNSEKDLG 180

Query: 181 KFWCPICKQGELQENKHSIHCTHCGLQLKKGNEVTLDLLHSRLAAVHAEHLDRGCRLKPM 240
           K WCPICKQG+LQENKH IHCTHCG+QL KGNEVTLDLL SRLA VHAEHLDRGCRLKPM
Sbjct: 181 KLWCPICKQGDLQENKHFIHCTHCGVQLNKGNEVTLDLLRSRLADVHAEHLDRGCRLKPM 240

Query: 241 FCVESRFNITALYISCKGCNTFEVVI 267
           FCVESRFNITALYISCK CNTFEVVI
Sbjct: 241 FCVESRFNITALYISCKSCNTFEVVI 262

[Close]

BLAST of Sed0017664 vs. ExPASy TrEMBL
Match: A0A0A0LTY4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G044910 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 9.6e-123
Identity = 219/270 (81.11%), Postives = 238/270 (88.15%), Query Frame = 0


Query: 1   MEEKDPNSDIQTRRSSIKVHPRYNNHQSWKQKLRENCCKRVREGRSRLLWKIRL----PS 60
           MEE  PN  IQTRRSSIK HPRYNN QSWKQKLRENCCKRVREGRSRLLWK+RL    P+
Sbjct: 1   MEEDSPNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT 60

Query: 61  YPNPLDDRQQVLIKTAFQDIFTDELKKMKDQSVNDFGKNLPSAPGSDDVLWEYEGFQDAY 120
           Y + L++RQQ LIK+AFQDIF DELKK+KD+SVND+ +NLPS P + DVLWEYEG  DAY
Sbjct: 61  YSHSLNNRQQDLIKSAFQDIFADELKKIKDESVNDYNENLPSVPEAADVLWEYEGIHDAY 120

Query: 121 DGEGEGEGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEEDEFLARAVYEHMQLNSE 180
               EG+GEEILLEMQRIFYEDLNVDL+QKESE PIVTWEDEEDEFLARAVYEHMQL++E
Sbjct: 121 ----EGDGEEILLEMQRIFYEDLNVDLRQKESEDPIVTWEDEEDEFLARAVYEHMQLSNE 180

Query: 181 KVLEKFWCPICKQGELQENKHSIHCTHCGLQLKKGNEVTLDLLHSRLAAVHAEHLDRGCR 240
           K+LEKFWCP+CKQGELQEN H IHCTHCGL+L KGNEVTLDLL  RLA VHAEHLDRGCR
Sbjct: 181 KILEKFWCPMCKQGELQENNHFIHCTHCGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCR 240

Query: 241 LKPMFCVESRFNITALYISCKGCNTFEVVI 267
           LKP FCVESRFNITALYISC+GCNTFEVVI
Sbjct: 241 LKPKFCVESRFNITALYISCEGCNTFEVVI 266

[Close]

BLAST of Sed0017664 vs. ExPASy TrEMBL
Match: A0A6J1C935 (uncharacterized protein LOC111008573 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008573 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 5.3e-121
Identity = 215/270 (79.63%), Postives = 237/270 (87.78%), Query Frame = 0


Query: 1   MEEKDPNSDIQTRRSSIKVHPRYNNHQSWKQKLRENCCKRVREGRSRLLWKIRL----PS 60
           MEE+DPNS  Q RR S+K HPRYNN+QSWKQKLRENC KRVREGRSRLLWK+RL    P+
Sbjct: 22  MEEEDPNSTTQIRRPSLKTHPRYNNYQSWKQKLRENCYKRVREGRSRLLWKMRLPVSSPT 81

Query: 61  YPNPLDDRQQVLIKTAFQDIFTDELKKMKDQSVNDFGKNLPSAPGSDDVLWEYEGFQDAY 120
           YP+ L++RQQ  +K+AFQDIF+DELKK+KDQS+ND+   LPSAP  DDVLWEYEG QDAY
Sbjct: 82  YPHSLNNRQQDFVKSAFQDIFSDELKKIKDQSLNDYDNKLPSAPECDDVLWEYEGIQDAY 141

Query: 121 DGEGEGEGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEEDEFLARAVYEHMQLNSE 180
               EGEGEEILLEMQRIFYEDL+VD++QK SEGPIVTWEDEEDEFLARAVYEHMQLNSE
Sbjct: 142 ----EGEGEEILLEMQRIFYEDLDVDVRQKGSEGPIVTWEDEEDEFLARAVYEHMQLNSE 201

Query: 181 KVLEKFWCPICKQGELQENKHSIHCTHCGLQLKKGNEVTLDLLHSRLAAVHAEHLDRGCR 240
           KV EKFWCPICKQGEL EN  SIHCTHCGLQL K NEVT+DLL SRLA VHAEHLDRGCR
Sbjct: 202 KVFEKFWCPICKQGELLENNRSIHCTHCGLQLSKANEVTMDLLRSRLADVHAEHLDRGCR 261

Query: 241 LKPMFCVESRFNITALYISCKGCNTFEVVI 267
           LKPMFCVE+RF+ITALYISC+GC TFE+VI
Sbjct: 262 LKPMFCVENRFDITALYISCEGCGTFEIVI 287

[Close]

BLAST of Sed0017664 vs. TAIR 10
Match: AT4G12760.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 240.4 bits (612), Expect = 1.7e-63
Identity = 131/266 (49.25%), Postives = 171/266 (64.29%), Query Frame = 0


Query: 1   MEEKDPNSDIQTRRSSIKVHPRYNNHQSWKQKLRENCCKRVREGRSRLLWKIRLPSYPNP 60
           ME+    +    +R+S K  P + ++   KQK RENC +RVRE R+RLLWK+R+    + 
Sbjct: 1   MEKLAKTASTIPKRTSNKSQPDF-DYSIRKQKFRENCFRRVREDRTRLLWKLRISDCQS- 60

Query: 61  LDDRQQVLIKTAFQDIFTDELKKMKDQSVNDFGKNLPSAPGSDDVLWEYEGFQDAYDGEG 120
               Q+ +I  AFQDI +DELKK++D S N  G N       DD+LWEYE   +   G  
Sbjct: 61  --SDQKEIINCAFQDIVSDELKKIEDSSRNLSG-NKTLTEDCDDILWEYE---EGLKGVY 120

Query: 121 EGEGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEEDEFLARAVYEHMQLNSEKVLE 180
           EG+ EEILLEMQ+IFY+DL  +     S   + TWEDEED++LA  V ++M LNSE+   
Sbjct: 121 EGDSEEILLEMQQIFYKDLLSETNVNGSFVQVETWEDEEDDYLAALVSQNMCLNSEQEES 180

Query: 181 KFWCPICKQGELQENKHSIHCTHCGLQLKKGNEVTLDLLHSRLAAVHAEHLDRGCRLKPM 240
           + WCPICK+GEL EN   I C  C +QL KG EV L++L  RLA  H EHL RGCRLKP 
Sbjct: 181 QIWCPICKKGELMENHRHIDCNMCDMQLNKGEEVNLNILQERLAEAHGEHLQRGCRLKPE 240

Query: 241 FCVESRFNITALYISCKGCNTFEVVI 267
           F V+S +N+ ALYI+C+ C TFEVV+
Sbjct: 241 FSVQSVYNLKALYITCEACKTFEVVV 258

The following BLAST results are available for this feature:

BLAST of Sed0017664 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023541291.1	5.1e-126	83.83	uncharacterized protein LOC111801509 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_038893884.1	8.6e-126	83.33	uncharacterized protein LOC120082685 isoform X1 [Benincasa hispida]	[more]
XP_022955133.1	9.6e-125	83.08	uncharacterized protein LOC111457192 isoform X1 [Cucurbita moschata]	[more]
KAG7012195.1	8.1e-124	83.33	hypothetical protein SDJN02_24947 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6573010.1	1.8e-123	83.59	hypothetical protein SDJN03_26897, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0017664 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0017664 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GT42	4.6e-125	83.08	uncharacterized protein LOC111457192 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A1S3AU18	4.3e-123	80.74	uncharacterized protein LOC103482820 OS=Cucumis melo OX=3656 GN=LOC103482820 PE=...	[more]
A0A6J1JWH1	7.4e-123	81.95	uncharacterized protein LOC111490304 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A0A0LTY4	9.6e-123	81.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G044910 PE=4 SV=1	[more]
A0A6J1C935	5.3e-121	79.63	uncharacterized protein LOC111008573 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Sed0017664 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12760.1	1.7e-63	49.25	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028158	RPA-interacting protein, N-terminal domain	PFAM	PF14766	RPA_interact_N	coord: 13..55 e-value: 9.8E-11 score: 41.1
IPR028159	RPA-interacting protein, C-terminal domain	PFAM	PF14768	RPA_interact_C	coord: 183..211 e-value: 3.2E-6 score: 27.6
IPR028155	RPA-interacting protein, central domain	PFAM	PF14767	RPA_interact_M	coord: 72..167 e-value: 6.0E-19 score: 68.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
IPR028156	RPA-interacting protein	PANTHER	PTHR31742	RPA-INTERACTING PROTEIN RPAIN	coord: 7..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017664.1	Sed0017664.1	mRNA
Sed0017664.2	Sed0017664.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006606	protein import into nucleus
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding