Sed0017616 (gene) Chayote v1

Overview


Name	Sed0017616
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG01: 31592812 .. 31593399 (+)
RNA-Seq Expression	Sed0017616
Synteny	Sed0017616

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTCGCAGGCCTTCAATCCCACGCAAGAGGCCCGACTCCAAGTGAAAGGGACCGAGCCCATGTGAGAAAAGGCCCTAAACCCATTGTAAGGCTGAAAGTAGAGCAATGGCCCAACGAACAAGGCATGGCACAAGTAGGGTTAGGCCTAAGCAAGTACGCACCCGACCCACCCTTGGTTGGGTCGGGAAAGGTTAGCCTCGATGATAAATCTCAAGAATTGAGAGTTAATTGTCTAAGTACAAATCCATTTCACGAAGCATTTCGCTATAGCATAAACCCAAATGAGTAAATTATTTCGCTAAAACATAACTTTCAAGTGAAGTGAACTATCCTATAGTTTTTTGGTTAGGATAAGGAAGTTGGAAGTTAACTAGCAAAAGATATGCTTCAATCTAATGCTTGTTGTTTTTTGGTTAGGATAAAAAAGGGTGAACACGGAGTACCAGTTGGTGACCAAAACACTACATGCTCAAACAAAGACGCGTGGCAGAAATCCAACAGAAAGCCCACCTCTAATCTCAGTCGTTGCGTGCAAGTCGTCGAGCTCAGACGTGGGAAAGTTTGTGGAGATCGTGGGGCATGA

mRNA sequence

ATGGAGGTCGCAGGCCTTCAATCCCACGCAAGAGGCCCGACTCCAAGTGAAAGGGACCGAGCCCATGTGAGAAAAGGCCCTAAACCCATTGTAAGGCTGAAAGTAGAGCAATGGCCCAACGAACAAGGCATGGCACAAGTAGGGTTAGGCCTAAGCAAGATAAAAAAGGGTGAACACGGAGTACCAGTTGGTGACCAAAACACTACATGCTCAAACAAAGACGCGTGGCAGAAATCCAACAGAAAGCCCACCTCTAATCTCAGTCGTTGCGTGCAAGTCGTCGAGCTCAGACGTGGGAAAGTTTGTGGAGATCGTGGGGCATGA

Coding sequence (CDS)

ATGGAGGTCGCAGGCCTTCAATCCCACGCAAGAGGCCCGACTCCAAGTGAAAGGGACCGAGCCCATGTGAGAAAAGGCCCTAAACCCATTGTAAGGCTGAAAGTAGAGCAATGGCCCAACGAACAAGGCATGGCACAAGTAGGGTTAGGCCTAAGCAAGATAAAAAAGGGTGAACACGGAGTACCAGTTGGTGACCAAAACACTACATGCTCAAACAAAGACGCGTGGCAGAAATCCAACAGAAAGCCCACCTCTAATCTCAGTCGTTGCGTGCAAGTCGTCGAGCTCAGACGTGGGAAAGTTTGTGGAGATCGTGGGGCATGA

Protein sequence

MEVAGLQSHARGPTPSERDRAHVRKGPKPIVRLKVEQWPNEQGMAQVGLGLSKIKKGEHGVPVGDQNTTCSNKDAWQKSNRKPTSNLSRCVQVVELRRGKVCGDRGA

Homology

The following BLAST results are available for this feature:

BLAST of Sed0017616 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0017616 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0017616 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0017616 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017616.1	Sed0017616.1	mRNA