Sed0017590 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTGATCTTGGTATCAGAGCACCATGGTTGATCCATCAGTGGAAAAAGATTAAGAGACCTCCCAAAATAAAGCAGCTGAGGAACTGCGCAAAAACACAGATGCTCAACGAACGGCTGAAATAGGAAAGGCGATAGTAGTAGAAGTTGATCCACGAGTTATGAGCTCACGAGTAACAGAGGCTGAGAAGGTAAGGATTCTGGTAAAACACAACAACATCCCGATTAGGTATCTATTTTTTCCAACCTCATAAATCAAACCACTTCCATCAAACTTAGCAGAACCAATTTTATGTTGTGGAAAAGCATTGTGATACCTAGGCTCAAAAGTCACAAGATTTATGGGCATTTTGATGGGTACACCTTGCCCAGATGAAATAGTGATAATACCACCATCAGAAGATGATCCTGAAGGGATGATTTTCACAAATCCTGAACATGATGTATGGATTACTACTGACCAATTTCTTGTAGGATGGTTGTACAACTCAATGACACCAACATGGTTGCACAAGTAATGGGCTATGACACTGCTAAGGCTCTTTGGCAAGCAATTGAAAACTGCTATAGGATTTATTCTCGTTCCCAAGAAGACTATAACTGACAAATGTTGCAACAAACTTGCAAAGGATCCATGAAAATGGATGAATATCTGACAAAGATGAAGGGGTACAATGACAACTTGGCTTTTGCTGGACATCCAGTTGACAACAAAACTTTAATATCCTACATTTTGGCTAGACTAGATGAAGAATACAATCCAATTGTTTGTATCCTTCGAAATCTAGAAATGACCTGGGAGACTTGTCAATATGAGCTAAGGCAAGACAAATTGGAAACACTCAAAGGTAATCTTTCTGTGAACCAAGCATCTGTTAATTTTGTTTCAACTAACAAGTTTAAGTCTACCCCGAGCAACTCTTCAAATACCAAAGGAGGGCAATGTAGCTAGGGAGGCAAAAACAACTATGGTGGCTCTAAAAATCAGACTTATCAAGCTAGTCCCAAGAATGTTCCACCTCAAGGGTATTCAAATCAGAAGGGGAGAGGGGGCAAATGGAGACGACAAGAACGTTATGCTCCCTACACAACAGAAAGGTGTCAAATTTGTAGGAAAATTGGCTATCTAGCATCAATATGCTATTTCCGTTATACTCCTCCAACCAACAATCCTCCAAAACAAGCTGCTCAACCTGCTCCCCTTGTCCTTGCTGCTACTACTTTAATGGCTTACCATGAGACTCTGCAAGATGAAGGGTGGTAGTATCTTGATAGTGGGGCCACACACCATGTTACTGCTGATATGGGACGAATGAATCTTCAAGGTGAATCCCCAGGTATGAAAACGATTGTAGTTGAAGATGGCTCAAAAGTCCCTATACTTGGTTTTAGTACTATTTTTCTTAAGACAACATACATGACTTTGATCCTAAAGGATGTTCTTTATGTGCCTAAAATGAGAAAAAACCTTATTAACTTGTCAAAACTGACTAGAGATAATGTTATTACTATGGAGTTTAATGTTATGTCTTGTATTGTTAAGGCCACTCAAACCAAGGAAATCAAGGTCATAGGGAGACTTGAGGAAGGGATGTACTGGGTGATTCATTTTAGAGAAGTTGCTGGAAGACTTCCTAAGCCTACAAATGGAGTATATTTTGAAGAAACAGAATTAAGCTTGAAGGAAAGTGTGCCA TCTGATCTTGGTATCAGAGCACCATGGTTGATCCATCAGTGGAAAAAGATTAAGAGACCTCCCAAAATAAAGCAGCTGAGGAACTGCGCAAAAACACAGATGCTCAACGAACGGCTGAAATAGGAAAGGCGATAGTAGTAGAAGTTGATCCACGAGTTATGAGCTCACGAGTAACAGAGGCTGAGAAGGATGGTTGTACAACTCAATGACACCAACATGGTTGCACAAGTAATGGGCTATGACACTGCTAAGGCTCTTTGGCAAGCAATTGAAAACTGCTATAGGATTTATTCTCGTTCCCAAGAAGACTATAACTGACAAATGTTGCAACAAACTTGCAAAGGATCCATGAAAATGGATGAATATCTGACAAAGATGAAGGGGTACAATGACAACTTGGCTTTTGCTGGACATCCAGTTGACAACAAAACTTTAATATCCTACATTTTGGCTAGACTAGATGAAGAATACAATCCAATTGTTTGTATCCTTCGAAATCTAGAAATGACCTGGGAGACTTGTCAATATGAGCTAAGGCAAGACAAATTGGAAACACTCAAAGGTAATCTTTCTGTGAACCAAGCATCTGTTAATTTTGTTTCAACTAACAAGTTTAAGTCTACCCCGAGCAACTCTTCAAATACCAAAGGAGGGCAATGTAGCTAGGGAGGCAAAAACAACTATGGTGGCTCTAAAAATCAGACTTATCAAGCTAGTCCCAAGAATGTTCCACCTCAAGGGTATTCAAATCAGAAGGGGAGAGGGGGCAAATGGAGACGACAAGAACGTTATGCTCCCTACACAACAGAAAGGTGTCAAATTTGTAGGAAAATTGGCTATCTAGCATCAATATGCTATTTCCGTTATACTCCTCCAACCAACAATCCTCCAAAACAAGCTGCTCAACCTGCTCCCCTTGTCCTTGCTGCTACTACTTTAATGGCTTACCATGAGACTCTGCAAGATGAAGGGTGGTAGTATCTTGATAGTGGGGCCACACACCATGTTACTGCTGATATGGGACGAATGAATCTTCAAGGTGAATCCCCAGGCCACTCAAACCAAGGAAATCAAGGTCATAGGGAGACTTGAGGAAGGGATGTACTGGGTGATTCATTTTAGAGAAGTTGCTGGAAGACTTCCTAAGCCTACAAATGGAGTATATTTTGAAGAAACAGAATTAAGCTTGAAGGAAAGTGTGCCA ATGTTGCAACAAACTTGCAAAGGATCCATGAAAATGGATGAATATCTGACAAAGATGAAGGGGTACAATGACAACTTGGCTTTTGCTGGACATCCAGTTGACAACAAAACTTTAATATCCTACATTTTGGCTAGACTAGATGAAGAATACAATCCAATTGTTTGTATCCTTCGAAATCTAGAAATGACCTGGGAGACTTGTCAATATGAGCTAAGGCAAGACAAATTGGAAACACTCAAAGGTAATCTTTCTGTGAACCAAGCATCTGTTAATTTTGTTTCAACTAACAAGTTTAAGTCTACCCCGAGCAACTCTTCAAATACCAAAGGAGGGCAATGTAGCTAG MLQQTCKGSMKMDEYLTKMKGYNDNLAFAGHPVDNKTLISYILARLDEEYNPIVCILRNLEMTWETCQYELRQDKLETLKGNLSVNQASVNFVSTNKFKSTPSNSSNTKGGQCS Homology
BLAST of Sed0017590 vs. NCBI nr
Match: XP_022151683.1 (uncharacterized protein LOC111019598 [Momordica charantia]) HSP 1 Score: 80.1 bits (196), Expect = 1.4e-11 Identity = 52/121 (42.98%), Postives = 71/121 (58.68%), Query Frame = 0
BLAST of Sed0017590 vs. NCBI nr
Match: KZV34405.1 (hypothetical protein F511_34028, partial [Dorcoceras hygrometricum]) HSP 1 Score: 74.7 bits (182), Expect = 5.7e-10 Identity = 49/116 (42.24%), Postives = 69/116 (59.48%), Query Frame = 0
BLAST of Sed0017590 vs. NCBI nr
Match: XP_038875081.1 (uncharacterized protein LOC120067610 [Benincasa hispida]) HSP 1 Score: 74.7 bits (182), Expect = 5.7e-10 Identity = 54/134 (40.30%), Postives = 73/134 (54.48%), Query Frame = 0
BLAST of Sed0017590 vs. NCBI nr
Match: XP_038902487.1 (uncharacterized protein LOC120089143 [Benincasa hispida]) HSP 1 Score: 73.6 bits (179), Expect = 1.3e-09 Identity = 35/72 (48.61%), Postives = 47/72 (65.28%), Query Frame = 0
BLAST of Sed0017590 vs. NCBI nr
Match: XP_038905164.1 (uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida]) HSP 1 Score: 73.2 bits (178), Expect = 1.7e-09 Identity = 48/124 (38.71%), Postives = 70/124 (56.45%), Query Frame = 0
BLAST of Sed0017590 vs. ExPASy TrEMBL
Match: A0A6J1DCW4 (uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019598 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 6.6e-12 Identity = 52/121 (42.98%), Postives = 71/121 (58.68%), Query Frame = 0
BLAST of Sed0017590 vs. ExPASy TrEMBL
Match: A0A2Z7BJW9 (Uncharacterized protein (Fragment) OS=Dorcoceras hygrometricum OX=472368 GN=F511_34028 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 2.8e-10 Identity = 49/116 (42.24%), Postives = 69/116 (59.48%), Query Frame = 0
BLAST of Sed0017590 vs. ExPASy TrEMBL
Match: A0A5C7GU53 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027156 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 1.2e-08 Identity = 42/100 (42.00%), Postives = 57/100 (57.00%), Query Frame = 0
BLAST of Sed0017590 vs. ExPASy TrEMBL
Match: A0A2Z6P4D5 (Integrase catalytic domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_412550 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.5e-08 Identity = 43/107 (40.19%), Postives = 59/107 (55.14%), Query Frame = 0
BLAST of Sed0017590 vs. ExPASy TrEMBL
Match: A0A151S6M8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=3821 GN=KK1_027809 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 3.4e-08 Identity = 41/91 (45.05%), Postives = 58/91 (63.74%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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