Sed0017532 (gene) Chayote v1

Overview


Name	Sed0017532
Type	gene
Organism	Sechium edule (Chayote v1)
Description	auxin-responsive protein SAUR24-like
Location	LG04: 47045232 .. 47045754 (-)
RNA-Seq Expression	Sed0017532
Synteny	Sed0017532

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAGTTTTTGCATTCTAAGTCGAAACAAACTTCCTTCTCTCCCGTTTTACGATCTTCTTGTTGCTCTAAAACATGGGGCTTTTCCATCTTCTCAAAAGAAGTCAAGGAGTTTCAGCAATTCCCAAGGGCTATTGTGCAGTCTATGTCGGAGAGGGCCAAAAGAAGCGGTTCGTGATCCCGATTACTCACTTGAATCAACCGTGTTTTCAAGAGTTGCTTTGTCAGACTGAGGAAGAATTCGGTTACCATCATCCGATGGGCGGTCTTACTATTCATTGCAGAGATGATATCTTCATTGATCTCATCTCCCGTTTGAATGATCAATGAGAGATGTTAACAGTTATAGTATACAACCAATCTAATAGAATATAGACATTAGAAATAACCAAAACCATGTACATTTTTTTCATTTTCCTCACTTTTTTTGTTTCCTTTAGTGGGGAGTAAAATAATGTTCCCCTGCTAGAGGAAGTTACCCAATGATGAAAATGAAATGGCCACACTTTTACAGGAAATTTAAGAG

mRNA sequence

CAAGTTTTTGCATTCTAAGTCGAAACAAACTTCCTTCTCTCCCGTTTTACGATCTTCTTGTTGCTCTAAAACATGGGGCTTTTCCATCTTCTCAAAAGAAGTCAAGGAGTTTCAGCAATTCCCAAGGGCTATTGTGCAGTCTATGTCGGAGAGGGCCAAAAGAAGCGGTTCGTGATCCCGATTACTCACTTGAATCAACCGTGTTTTCAAGAGTTGCTTTGTCAGACTGAGGAAGAATTCGGTTACCATCATCCGATGGGCGGTCTTACTATTCATTGCAGAGATGATATCTTCATTGATCTCATCTCCCGTTTGAATGATCAATGAGAGATGTTAACAGTTATAGTATACAACCAATCTAATAGAATATAGACATTAGAAATAACCAAAACCATGTACATTTTTTTCATTTTCCTCACTTTTTTTGTTTCCTTTAGTGGGGAGTAAAATAATGTTCCCCTGCTAGAGGAAGTTACCCAATGATGAAAATGAAATGGCCACACTTTTACAGGAAATTTAAGAG

Coding sequence (CDS)

ATGGGGCTTTTCCATCTTCTCAAAAGAAGTCAAGGAGTTTCAGCAATTCCCAAGGGCTATTGTGCAGTCTATGTCGGAGAGGGCCAAAAGAAGCGGTTCGTGATCCCGATTACTCACTTGAATCAACCGTGTTTTCAAGAGTTGCTTTGTCAGACTGAGGAAGAATTCGGTTACCATCATCCGATGGGCGGTCTTACTATTCATTGCAGAGATGATATCTTCATTGATCTCATCTCCCGTTTGAATGATCAATGA

Protein sequence

MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLNDQ

Homology

[Close]

BLAST of Sed0017532 vs. NCBI nr
Match: XP_022136192.1 (auxin-responsive protein SAUR24-like [Momordica charantia])

HSP 1 Score: 163.3 bits (412), Expect = 9.0e-37
Identity = 73/83 (87.95%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 1  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHH 60
          MGL  LLKR+QGVSA+PKGYCAVYVGE QKKRFVIPI++LNQPCFQELLCQ EEEFGY+H
Sbjct: 1  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYH 60

Query: 61 PMGGLTIHCRDDIFIDLISRLND 84
          PMGGLTIHCRDDIF DLISRLND
Sbjct: 61 PMGGLTIHCRDDIFTDLISRLND 83

[Close]

BLAST of Sed0017532 vs. NCBI nr
Match: XP_011658582.1 (auxin-responsive protein SAUR24 [Cucumis sativus])

HSP 1 Score: 158.7 bits (400), Expect = 2.2e-35
Identity = 71/83 (85.54%), Postives = 77/83 (92.77%), Query Frame = 0


Query: 1  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHH 60
          M L HLLKRSQGVS+IPKGYCAVYVGE QKKRF+IPI++LNQPCFQELL QTEEEFGYHH
Sbjct: 1  MRLIHLLKRSQGVSSIPKGYCAVYVGESQKKRFIIPISYLNQPCFQELLSQTEEEFGYHH 60

Query: 61 PMGGLTIHCRDDIFIDLISRLND 84
          PMGGLTIHC+D IF +LISRLND
Sbjct: 61 PMGGLTIHCKDAIFTNLISRLND 83

[Close]

BLAST of Sed0017532 vs. NCBI nr
Match: KAE8645660.1 (hypothetical protein Csa_020551 [Cucumis sativus])

HSP 1 Score: 154.8 bits (390), Expect = 3.2e-34
Identity = 70/80 (87.50%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 1  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHH 60
          MG+  LLKR+QGVS IPKGYCAVYVGE QKKRFVIPITHLNQ CFQELL QTEE+FGYHH
Sbjct: 1  MGIRQLLKRNQGVSTIPKGYCAVYVGENQKKRFVIPITHLNQSCFQELLSQTEEKFGYHH 60

Query: 61 PMGGLTIHCRDDIFIDLISR 81
          PMGGLTIHCRDDIF DLISR
Sbjct: 61 PMGGLTIHCRDDIFTDLISR 80

[Close]

BLAST of Sed0017532 vs. NCBI nr
Match: KAA0049710.1 (auxin-induced protein 15A-like [Cucumis melo var. makuwa])

HSP 1 Score: 154.1 bits (388), Expect = 5.5e-34
Identity = 66/83 (79.52%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 1  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHH 60
          M L HLLKR++GVSA+PKGYCAVYVG+ QKKRF+IPI +LN+PCFQELLCQTEEEFGY+H
Sbjct: 1  MRLRHLLKRNEGVSAVPKGYCAVYVGQSQKKRFMIPIAYLNRPCFQELLCQTEEEFGYYH 60

Query: 61 PMGGLTIHCRDDIFIDLISRLND 84
          PMGGLTIHCRDDIF + IS +ND
Sbjct: 61 PMGGLTIHCRDDIFAEFISHMND 83

[Close]

BLAST of Sed0017532 vs. NCBI nr
Match: KAE8645661.1 (hypothetical protein Csa_020412 [Cucumis sativus])

HSP 1 Score: 134.0 bits (336), Expect = 5.9e-28
Identity = 61/80 (76.25%), Postives = 67/80 (83.75%), Query Frame = 0


Query: 5   HLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGG 64
           H +KR   VS +PKGYCAVYVGE QKKRFVIPIT+LNQPCFQ+LL QT EEF Y+HPMGG
Sbjct: 622 HQMKR---VSMVPKGYCAVYVGENQKKRFVIPITYLNQPCFQDLLNQTTEEFEYYHPMGG 681

Query: 65  LTIHCRDDIFIDLISRLNDQ 85
           LT HC DDIF DLIS LN+Q
Sbjct: 682 LTFHCSDDIFADLISHLNEQ 698

[Close]

BLAST of Sed0017532 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.5e-23
Identity = 49/82 (59.76%), Postives = 64/82 (78.05%), Query Frame = 0


Query: 1  MGLFHLLKRSQGV-SAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYH 60
          +G   +L RS G  SA PKG+ AVYVGE QKKR+++P+++LNQP FQ LL ++EEEFG+ 
Sbjct: 8  LGAKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFD 67

Query: 61 HPMGGLTIHCRDDIFIDLISRL 82
          HPMGGLTI C +D FI++ SRL
Sbjct: 68 HPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Sed0017532 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.3e-22
Identity = 48/82 (58.54%), Postives = 64/82 (78.05%), Query Frame = 0


Query: 1  MGLFHLLKRS-QGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYH 60
          +G   +L RS   VSA PKG+ AVYVGE QKKR+++P+++LNQP FQ LL ++E+EFG+ 
Sbjct: 8  LGAKKILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFD 67

Query: 61 HPMGGLTIHCRDDIFIDLISRL 82
          HPMGGLTI C +D FI++ SRL
Sbjct: 68 HPMGGLTIPCHEDTFINVTSRL 89

[Close]

BLAST of Sed0017532 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.2e-22
Identity = 46/77 (59.74%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 6  LLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGL 65
          L + +  VSA PKG+ AVYVGE QKKR+++P+++LNQP FQ LL ++EEEFG+ HPMGGL
Sbjct: 14 LSRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGL 73

Query: 66 TIHCRDDIFIDLISRLN 83
          TI C +D FI++ SRL+
Sbjct: 74 TIPCPEDTFINVTSRLH 90

[Close]

BLAST of Sed0017532 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 5.0e-22
Identity = 48/81 (59.26%), Postives = 62/81 (76.54%), Query Frame = 0


Query: 1  MGLFHLLKRS-QGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYH 60
          +G   +L RS    SA PKG+ AVYVGE QKKR+++PI++LNQP FQ LL ++EEEFG+ 
Sbjct: 8  LGAKKILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFD 67

Query: 61 HPMGGLTIHCRDDIFIDLISR 81
          HPMGGLTI C +D FI++ SR
Sbjct: 68 HPMGGLTIPCPEDTFINVTSR 88

[Close]

BLAST of Sed0017532 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.1e-21
Identity = 47/81 (58.02%), Postives = 63/81 (77.78%), Query Frame = 0


Query: 1  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHH 60
          +G   +L RS   SA PKG+ AVYVGE QKKR+++P+++L+QP FQ LL ++EEEFG+ H
Sbjct: 8  LGAKKILSRST-ASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDH 67

Query: 61 PMGGLTIHCRDDIFIDLISRL 82
          PMGGLTI C +D FI++ SRL
Sbjct: 68 PMGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of Sed0017532 vs. ExPASy TrEMBL
Match: A0A6J1C4W2 (auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111007947 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.4e-37
Identity = 73/83 (87.95%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 1  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHH 60
          MGL  LLKR+QGVSA+PKGYCAVYVGE QKKRFVIPI++LNQPCFQELLCQ EEEFGY+H
Sbjct: 1  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYH 60

Query: 61 PMGGLTIHCRDDIFIDLISRLND 84
          PMGGLTIHCRDDIF DLISRLND
Sbjct: 61 PMGGLTIHCRDDIFTDLISRLND 83

[Close]

BLAST of Sed0017532 vs. ExPASy TrEMBL
Match: A0A0A0K4K1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009080 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.7e-36
Identity = 71/83 (85.54%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 1  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHH 60
          M L HLLKR+QGVSA+PKGYCAVYVGE QKKRFVIPIT+LN+PCFQ+LLCQTEEEFGY+H
Sbjct: 1  MRLQHLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPITYLNRPCFQQLLCQTEEEFGYYH 60

Query: 61 PMGGLTIHCRDDIFIDLISRLND 84
          PMGGLTIHCRDDIF DLIS +ND
Sbjct: 61 PMGGLTIHCRDDIFTDLISNMND 83

[Close]

BLAST of Sed0017532 vs. ExPASy TrEMBL
Match: A0A0A0K5U4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009070 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.1e-35
Identity = 71/83 (85.54%), Postives = 77/83 (92.77%), Query Frame = 0


Query: 1  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHH 60
          M L HLLKRSQGVS+IPKGYCAVYVGE QKKRF+IPI++LNQPCFQELL QTEEEFGYHH
Sbjct: 1  MRLIHLLKRSQGVSSIPKGYCAVYVGESQKKRFIIPISYLNQPCFQELLSQTEEEFGYHH 60

Query: 61 PMGGLTIHCRDDIFIDLISRLND 84
          PMGGLTIHC+D IF +LISRLND
Sbjct: 61 PMGGLTIHCKDAIFTNLISRLND 83

[Close]

BLAST of Sed0017532 vs. ExPASy TrEMBL
Match: A0A5A7U363 (Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G00540 PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.6e-34
Identity = 66/83 (79.52%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 1  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHH 60
          M L HLLKR++GVSA+PKGYCAVYVG+ QKKRF+IPI +LN+PCFQELLCQTEEEFGY+H
Sbjct: 1  MRLRHLLKRNEGVSAVPKGYCAVYVGQSQKKRFMIPIAYLNRPCFQELLCQTEEEFGYYH 60

Query: 61 PMGGLTIHCRDDIFIDLISRLND 84
          PMGGLTIHCRDDIF + IS +ND
Sbjct: 61 PMGGLTIHCRDDIFAEFISHMND 83

[Close]

BLAST of Sed0017532 vs. ExPASy TrEMBL
Match: A0A0A0K5V1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009120 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 6.7e-30
Identity = 66/89 (74.16%), Postives = 72/89 (80.90%), Query Frame = 0


Query: 1  MGLFHLLKRS-----QGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEE 60
          MGL  LL+RS     Q VS +PKGYCAVYVGE QKKRFVIPIT+LNQPCFQ+LL QT EE
Sbjct: 1  MGLRRLLRRSSMNGNQRVSMVPKGYCAVYVGENQKKRFVIPITYLNQPCFQDLLNQTTEE 60

Query: 61 FGYHHPMGGLTIHCRDDIFIDLISRLNDQ 85
          F Y+HPMGGLT HC DDIF DLIS LN+Q
Sbjct: 61 FEYYHPMGGLTFHCSDDIFADLISHLNEQ 89

[Close]

BLAST of Sed0017532 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 108.2 bits (269), Expect = 3.2e-24
Identity = 49/82 (59.76%), Postives = 64/82 (78.05%), Query Frame = 0


Query: 1  MGLFHLLKRSQGV-SAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYH 60
          +G   +L RS G  SA PKG+ AVYVGE QKKR+++P+++LNQP FQ LL ++EEEFG+ 
Sbjct: 8  LGAKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFD 67

Query: 61 HPMGGLTIHCRDDIFIDLISRL 82
          HPMGGLTI C +D FI++ SRL
Sbjct: 68 HPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Sed0017532 vs. TAIR 10
Match: AT5G18050.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 106.7 bits (265), Expect = 9.3e-24
Identity = 48/82 (58.54%), Postives = 64/82 (78.05%), Query Frame = 0


Query: 1  MGLFHLLKRS-QGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYH 60
          +G   +L RS   VSA PKG+ AVYVGE QKKR+++P+++LNQP FQ LL ++E+EFG+ 
Sbjct: 8  LGAKKILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFD 67

Query: 61 HPMGGLTIHCRDDIFIDLISRL 82
          HPMGGLTI C +D FI++ SRL
Sbjct: 68 HPMGGLTIPCHEDTFINVTSRL 89

[Close]

BLAST of Sed0017532 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.9 bits (263), Expect = 1.6e-23
Identity = 46/77 (59.74%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 6  LLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGL 65
          L + +  VSA PKG+ AVYVGE QKKR+++P+++LNQP FQ LL ++EEEFG+ HPMGGL
Sbjct: 14 LSRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGL 73

Query: 66 TIHCRDDIFIDLISRLN 83
          TI C +D FI++ SRL+
Sbjct: 74 TIPCPEDTFINVTSRLH 90

[Close]

BLAST of Sed0017532 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.5 bits (262), Expect = 2.1e-23
Identity = 50/81 (61.73%), Postives = 61/81 (75.31%), Query Frame = 0


Query: 3  LFHLLKRSQGVSAIPKGYCAVYVGE-GQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHP 62
          L   L  S    AIPKG+ AVYVGE  QK+RFV+P+T+L+ PCFQ+LL + EEEFG+ HP
Sbjct: 15 LLKSLSHSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQKLLRKAEEEFGFDHP 74

Query: 63 MGGLTIHCRDDIFIDLISRLN 83
          MGGLTI C + IFIDL SRL+
Sbjct: 75 MGGLTIPCTEQIFIDLASRLS 95

[Close]

BLAST of Sed0017532 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 104.8 bits (260), Expect = 3.5e-23
Identity = 48/81 (59.26%), Postives = 62/81 (76.54%), Query Frame = 0


Query: 1  MGLFHLLKRS-QGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYH 60
          +G   +L RS    SA PKG+ AVYVGE QKKR+++PI++LNQP FQ LL ++EEEFG+ 
Sbjct: 8  LGAKKILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFD 67

Query: 61 HPMGGLTIHCRDDIFIDLISR 81
          HPMGGLTI C +D FI++ SR
Sbjct: 68 HPMGGLTIPCPEDTFINVTSR 88

The following BLAST results are available for this feature:

BLAST of Sed0017532 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136192.1	9.0e-37	87.95	auxin-responsive protein SAUR24-like [Momordica charantia]	[more]
XP_011658582.1	2.2e-35	85.54	auxin-responsive protein SAUR24 [Cucumis sativus]	[more]
KAE8645660.1	3.2e-34	87.50	hypothetical protein Csa_020551 [Cucumis sativus]	[more]
KAA0049710.1	5.5e-34	79.52	auxin-induced protein 15A-like [Cucumis melo var. makuwa]	[more]
KAE8645661.1	5.9e-28	76.25	hypothetical protein Csa_020412 [Cucumis sativus]	[more]

BLAST of Sed0017532 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK62	4.5e-23	59.76	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJF7	1.3e-22	58.54	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
Q9FJF6	2.2e-22	59.74	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 S...	[more]
Q9FJG0	5.0e-22	59.26	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FJF9	1.1e-21	58.02	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]

BLAST of Sed0017532 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C4W2	4.4e-37	87.95	auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A0A0K4K1	1.7e-36	85.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009080 PE=3 SV=1	[more]
A0A0A0K5U4	1.1e-35	85.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009070 PE=3 SV=1	[more]
A0A5A7U363	2.6e-34	79.52	Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A0A0K5V1	6.7e-30	74.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009120 PE=3 SV=1	[more]

BLAST of Sed0017532 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18080.1	3.2e-24	59.76	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	9.3e-24	58.54	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	1.6e-23	59.74	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	2.1e-23	61.73	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	3.5e-23	59.26	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..81 e-value: 1.4E-21 score: 76.4
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 5..82
None	No IPR available	PANTHER	PTHR31929:SF117	SUBFAMILY NOT NAMED	coord: 5..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017532.1	Sed0017532.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin