Sed0017481 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTTGTCTGTGGCTCTTGATGGTTGTCCTACACATGTCCTAGGACATAAGAGATGGAGAGCTTATAAAAAGACTCTCAACAACTTCGACAAGCCCGCGCAAGCATTAGGCCTTGACGTTGCGCTGCGAGCCCGCCTCCCGAACCTCGACTCCAAGCAGACTGTGGTGGTCGGAAAATGGTATTTCCCTTTCATCTTTATTCGAGACGGGGTATCGATTTCTGCTCAAATGAAAAAATCGCCCTATTTCAAAATGACCCTCGAGCAAAATTGGGAACAGATATATGAACACGGCAGTTTTTATGGGGAAGGCACAATGGTGTGGAGGTGAATGTTTCTGTTAAGAGACAGGTGGTTTTAGTTGGAGGGTTGGCGTCGAAGAGGGCGGTGGCCCGCGGGGTCATGTGGTTCGGTACGGGGCAGGTGGGGTTGAGCATGGCATTGTGGAGAGGGTGAAATGGGAGCAAGAGAGGAGTGGGATTAAATGGAGGGAAAATGAGGACGTGGTTGAGAGGGTGGTGAGTGTTATAACTCAGACTGACTCCACCAACTCTTTGGACAAAGCCACACCTCTGCAGACTGATGTTACTGCTTCATCTGCTCCAACTGTTCTCTGTTGCGTGTAA ATGTCTTTGTCTGTGGCTCTTGATGGTTGTCCTACACATGTCCTAGGACATAAGAGATGGAGAGCTTATAAAAAGACTCTCAACAACTTCGACAAGCCCGCGCAAGCATTAGGCCTTGACGTTGCGCTGCGAGCCCGCCTCCCGAACCTCGACTCCAAGCAGACTGTGGTGGTCGGAAAATGGTATTTCCCTTTCATCTTTATTCGAGACGGGACAGGTGGTTTTAGTTGGAGGGTTGGCGTCGAAGAGGGCGGTGGCCCGCGGGGTCATGTGGTTCGGTACGGGGCAGGTGGGGTTGAGCATGGCATTGTGGAGAGGGTGAAATGGGAGCAAGAGAGGAGTGGGATTAAATGGAGGGAAAATGAGGACGTGGTTGAGAGGGTGGTGAGTGTTATAACTCAGACTGACTCCACCAACTCTTTGGACAAAGCCACACCTCTGCAGACTGATGTTACTGCTTCATCTGCTCCAACTGTTCTCTGTTGCGTGTAA ATGTCTTTGTCTGTGGCTCTTGATGGTTGTCCTACACATGTCCTAGGACATAAGAGATGGAGAGCTTATAAAAAGACTCTCAACAACTTCGACAAGCCCGCGCAAGCATTAGGCCTTGACGTTGCGCTGCGAGCCCGCCTCCCGAACCTCGACTCCAAGCAGACTGTGGTGGTCGGAAAATGGTATTTCCCTTTCATCTTTATTCGAGACGGGACAGGTGGTTTTAGTTGGAGGGTTGGCGTCGAAGAGGGCGGTGGCCCGCGGGGTCATGTGGTTCGGTACGGGGCAGGTGGGGTTGAGCATGGCATTGTGGAGAGGGTGAAATGGGAGCAAGAGAGGAGTGGGATTAAATGGAGGGAAAATGAGGACGTGGTTGAGAGGGTGGTGAGTGTTATAACTCAGACTGACTCCACCAACTCTTTGGACAAAGCCACACCTCTGCAGACTGATGTTACTGCTTCATCTGCTCCAACTGTTCTCTGTTGCGTGTAA MSLSVALDGCPTHVLGHKRWRAYKKTLNNFDKPAQALGLDVALRARLPNLDSKQTVVVGKWYFPFIFIRDGTGGFSWRVGVEEGGGPRGHVVRYGAGGVEHGIVERVKWEQERSGIKWRENEDVVERVVSVITQTDSTNSLDKATPLQTDVTASSAPTVLCCV Homology
BLAST of Sed0017481 vs. NCBI nr
Match: XP_023542039.1 (uncharacterized protein LOC111802013 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 110.5 bits (275), Expect = 1.3e-20 Identity = 79/175 (45.14%), Postives = 87/175 (49.71%), Query Frame = 0
BLAST of Sed0017481 vs. NCBI nr
Match: KAG7013091.1 (hypothetical protein SDJN02_25847, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 109.4 bits (272), Expect = 3.0e-20 Identity = 78/175 (44.57%), Postives = 88/175 (50.29%), Query Frame = 0
BLAST of Sed0017481 vs. NCBI nr
Match: XP_022945636.1 (uncharacterized protein LOC111449821 [Cucurbita moschata]) HSP 1 Score: 108.6 bits (270), Expect = 5.1e-20 Identity = 78/175 (44.57%), Postives = 88/175 (50.29%), Query Frame = 0
BLAST of Sed0017481 vs. NCBI nr
Match: KAG6574031.1 (hypothetical protein SDJN03_27918, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 108.2 bits (269), Expect = 6.7e-20 Identity = 77/175 (44.00%), Postives = 88/175 (50.29%), Query Frame = 0
BLAST of Sed0017481 vs. NCBI nr
Match: XP_022968360.1 (uncharacterized protein LOC111467621 [Cucurbita maxima]) HSP 1 Score: 103.6 bits (257), Expect = 1.6e-18 Identity = 77/175 (44.00%), Postives = 85/175 (48.57%), Query Frame = 0
BLAST of Sed0017481 vs. ExPASy TrEMBL
Match: A0A6J1G1G0 (uncharacterized protein LOC111449821 OS=Cucurbita moschata OX=3662 GN=LOC111449821 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 2.5e-20 Identity = 78/175 (44.57%), Postives = 88/175 (50.29%), Query Frame = 0
BLAST of Sed0017481 vs. ExPASy TrEMBL
Match: A0A6J1HWZ9 (uncharacterized protein LOC111467621 OS=Cucurbita maxima OX=3661 GN=LOC111467621 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 8.0e-19 Identity = 77/175 (44.00%), Postives = 85/175 (48.57%), Query Frame = 0
BLAST of Sed0017481 vs. ExPASy TrEMBL
Match: A0A0A0KUD7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608100 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 3.7e-16 Identity = 67/178 (37.64%), Postives = 80/178 (44.94%), Query Frame = 0
BLAST of Sed0017481 vs. ExPASy TrEMBL
Match: A0A6J1D6Y4 (uncharacterized protein LOC111017603 OS=Momordica charantia OX=3673 GN=LOC111017603 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 1.2e-14 Identity = 67/170 (39.41%), Postives = 85/170 (50.00%), Query Frame = 0
BLAST of Sed0017481 vs. ExPASy TrEMBL
Match: A0A5A7SZ71 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00480 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 2.0e-14 Identity = 66/179 (36.87%), Postives = 80/179 (44.69%), Query Frame = 0
BLAST of Sed0017481 vs. TAIR 10
Match: AT1G13520.1 (Protein of unknown function (DUF1262) ) HSP 1 Score: 60.5 bits (145), Expect = 1.5e-09 Identity = 28/67 (41.79%), Postives = 38/67 (56.72%), Query Frame = 0
BLAST of Sed0017481 vs. TAIR 10
Match: AT1G13470.1 (Protein of unknown function (DUF1262) ) HSP 1 Score: 59.7 bits (143), Expect = 2.5e-09 Identity = 29/68 (42.65%), Postives = 39/68 (57.35%), Query Frame = 0
BLAST of Sed0017481 vs. TAIR 10
Match: AT1G61600.1 (Protein of unknown function (DUF1262) ) HSP 1 Score: 56.2 bits (134), Expect = 2.8e-08 Identity = 29/73 (39.73%), Postives = 40/73 (54.79%), Query Frame = 0
BLAST of Sed0017481 vs. TAIR 10
Match: AT1G13490.1 (Protein of unknown function (DUF1262) ) HSP 1 Score: 55.8 bits (133), Expect = 3.7e-08 Identity = 29/69 (42.03%), Postives = 39/69 (56.52%), Query Frame = 0
BLAST of Sed0017481 vs. TAIR 10
Match: AT1G13510.1 (Protein of unknown function (DUF1262) ) HSP 1 Score: 55.1 bits (131), Expect = 6.2e-08 Identity = 27/67 (40.30%), Postives = 35/67 (52.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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