Sed0017462 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AATTAATCCCCTTCATATCCTCTTCCTCTTTAGATAAGTCGTTTTAGACTTCACAAAAACAGAGTAACAAGAAACAGAGGGCGGCCATGGCTGGTCTGCAGAGATCTGCGGTGTCTTTCCGGCGGCAGGGATCTTCCGGCCAGGTTTGGGAGAACAACTTAATAGCGGAGAAGTTCATCAACCCGCCGCAAAACGACGGAGAATCAAGCGCCGCAGCCGCCGGAGAGGTGAAGCCCGGAAGAATTCTCCCGCCGATCAAGACGATTGACCGGAGCCGATCAAACCGCGGCGGAGGACGTGGGTTCCGGAGTAAAGAGACGGCGGCGCCGCCGGCCGAGCCGCCGTCGCCCAGAGTTTCGGCTTGTGGGCTCTGCAGCGCTTTTGGGAAATCCAGCGGCAAGAAACAGAGAGCGGCGGCGGCTGGTAAGCGCCGATCACGGTAG AATTAATCCCCTTCATATCCTCTTCCTCTTTAGATAAGTCGTTTTAGACTTCACAAAAACAGAGTAACAAGAAACAGAGGGCGGCCATGGCTGGTCTGCAGAGATCTGCGGTGTCTTTCCGGCGGCAGGGATCTTCCGGCCAGGTTTGGGAGAACAACTTAATAGCGGAGAAGTTCATCAACCCGCCGCAAAACGACGGAGAATCAAGCGCCGCAGCCGCCGGAGAGGTGAAGCCCGGAAGAATTCTCCCGCCGATCAAGACGATTGACCGGAGCCGATCAAACCGCGGCGGAGGACGTGGGTTCCGGAGTAAAGAGACGGCGGCGCCGCCGGCCGAGCCGCCGTCGCCCAGAGTTTCGGCTTGTGGGCTCTGCAGCGCTTTTGGGAAATCCAGCGGCAAGAAACAGAGAGCGGCGGCGGCTGGTAAGCGCCGATCACGGTAG ATGGCTGGTCTGCAGAGATCTGCGGTGTCTTTCCGGCGGCAGGGATCTTCCGGCCAGGTTTGGGAGAACAACTTAATAGCGGAGAAGTTCATCAACCCGCCGCAAAACGACGGAGAATCAAGCGCCGCAGCCGCCGGAGAGGTGAAGCCCGGAAGAATTCTCCCGCCGATCAAGACGATTGACCGGAGCCGATCAAACCGCGGCGGAGGACGTGGGTTCCGGAGTAAAGAGACGGCGGCGCCGCCGGCCGAGCCGCCGTCGCCCAGAGTTTCGGCTTGTGGGCTCTGCAGCGCTTTTGGGAAATCCAGCGGCAAGAAACAGAGAGCGGCGGCGGCTGGTAAGCGCCGATCACGGTAG MAGLQRSAVSFRRQGSSGQVWENNLIAEKFINPPQNDGESSAAAAGEVKPGRILPPIKTIDRSRSNRGGGRGFRSKETAAPPAEPPSPRVSACGLCSAFGKSSGKKQRAAAAGKRRSR Homology
BLAST of Sed0017462 vs. NCBI nr
Match: XP_022991595.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita maxima]) HSP 1 Score: 165.6 bits (418), Expect = 2.5e-37 Identity = 89/118 (75.42%), Postives = 97/118 (82.20%), Query Frame = 0
BLAST of Sed0017462 vs. NCBI nr
Match: XP_023549291.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 162.9 bits (411), Expect = 1.7e-36 Identity = 90/119 (75.63%), Postives = 97/119 (81.51%), Query Frame = 0
BLAST of Sed0017462 vs. NCBI nr
Match: KAG6575586.1 (MAPK kinase substrate protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 162.2 bits (409), Expect = 2.8e-36 Identity = 90/119 (75.63%), Postives = 97/119 (81.51%), Query Frame = 0
BLAST of Sed0017462 vs. NCBI nr
Match: KAG7014127.1 (MAPK kinase substrate protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 161.8 bits (408), Expect = 3.7e-36 Identity = 90/120 (75.00%), Postives = 97/120 (80.83%), Query Frame = 0
BLAST of Sed0017462 vs. NCBI nr
Match: XP_023000641.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita maxima]) HSP 1 Score: 158.3 bits (399), Expect = 4.1e-35 Identity = 82/118 (69.49%), Postives = 94/118 (79.66%), Query Frame = 0
BLAST of Sed0017462 vs. ExPASy Swiss-Prot
Match: Q9SSC1 (MAPK kinase substrate protein At1g80180 OS=Arabidopsis thaliana OX=3702 GN=At1g80180 PE=1 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.1e-14 Identity = 67/140 (47.86%), Postives = 78/140 (55.71%), Query Frame = 0
BLAST of Sed0017462 vs. ExPASy Swiss-Prot
Match: Q9XI29 (Uncharacterized protein At1g15400 OS=Arabidopsis thaliana OX=3702 GN=At1g15400 PE=1 SV=2) HSP 1 Score: 78.2 bits (191), Expect = 7.0e-14 Identity = 65/140 (46.43%), Postives = 81/140 (57.86%), Query Frame = 0
BLAST of Sed0017462 vs. ExPASy TrEMBL
Match: A0A6J1JTD9 (MAPK kinase substrate protein At1g80180-like OS=Cucurbita maxima OX=3661 GN=LOC111488162 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 1.2e-37 Identity = 89/118 (75.42%), Postives = 97/118 (82.20%), Query Frame = 0
BLAST of Sed0017462 vs. ExPASy TrEMBL
Match: A0A6J1KGD4 (MAPK kinase substrate protein At1g80180-like OS=Cucurbita maxima OX=3661 GN=LOC111494889 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 2.0e-35 Identity = 82/118 (69.49%), Postives = 94/118 (79.66%), Query Frame = 0
BLAST of Sed0017462 vs. ExPASy TrEMBL
Match: A0A6J1HM35 (MAPK kinase substrate protein At1g80180-like OS=Cucurbita moschata OX=3662 GN=LOC111464222 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 1.4e-33 Identity = 82/121 (67.77%), Postives = 94/121 (77.69%), Query Frame = 0
BLAST of Sed0017462 vs. ExPASy TrEMBL
Match: A0A5D3CFK2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002140 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 2.4e-33 Identity = 81/118 (68.64%), Postives = 94/118 (79.66%), Query Frame = 0
BLAST of Sed0017462 vs. ExPASy TrEMBL
Match: A0A1S3CEE2 (uncharacterized protein At1g15400-like OS=Cucumis melo OX=3656 GN=LOC103499785 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 2.4e-33 Identity = 81/118 (68.64%), Postives = 94/118 (79.66%), Query Frame = 0
BLAST of Sed0017462 vs. TAIR 10
Match: AT1G80180.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15400.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 80.9 bits (198), Expect = 7.7e-16 Identity = 67/140 (47.86%), Postives = 78/140 (55.71%), Query Frame = 0
BLAST of Sed0017462 vs. TAIR 10
Match: AT1G15400.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 78.2 bits (191), Expect = 5.0e-15 Identity = 65/140 (46.43%), Postives = 81/140 (57.86%), Query Frame = 0
BLAST of Sed0017462 vs. TAIR 10
Match: AT1G15400.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 78.2 bits (191), Expect = 5.0e-15 Identity = 65/140 (46.43%), Postives = 81/140 (57.86%), Query Frame = 0
BLAST of Sed0017462 vs. TAIR 10
Match: AT1G15400.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 84 Blast hits to 84 proteins in 17 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 78.2 bits (191), Expect = 5.0e-15 Identity = 65/140 (46.43%), Postives = 81/140 (57.86%), Query Frame = 0
BLAST of Sed0017462 vs. TAIR 10
Match: AT5G20100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.5 bits (153), Expect = 1.3e-10 Identity = 45/116 (38.79%), Postives = 65/116 (56.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|