Sed0017424 (gene) Chayote v1

Overview


Name	Sed0017424
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ribulose bisphosphate carboxylase large chain
Location	LG13: 18776720 .. 18778220 (-)
RNA-Seq Expression	Sed0017424
Synteny	Sed0017424

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTGTAGGGAGGGACTTATGTCACCACAAACAGAGACTAAAGCAAGTGTTGGATTCAAAGCTGGTGTTAAAGATTATAAATTGACTTATTATACTCCTGAATATGAAACCAAAGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAACCGGGAGTTCCACCCGAGGAAGCAGGGGCCGCTGTAGCTGCTGAATCTTCTACTGGTACATGGACAACTGTGTGGACCGATGGGCTTACCAGTCTTGATCGTTACAAAGGCCGATGCTATGGCATCGAGCCTGTTGCTGGAGAAGAAAGTCAATTTATTGCTTATGTAGCTTATCCCCTAGACCTTTTTGAAGAAGGTTCTGTTACTAACATGTTTACTTCCATTGTGGGTAATGTATTTGGATTCAAGGCTCTACGCGCTCTACGTCTGGAGGATTTGCGAATCCCTACTGCTTATGTTAAAACTTTCCAAGGCCCACCTCACGGTATCCAGGTTGAAAGAGATAAATTGAACAAGTATGGTCGCCCTCTATTGGGATGTACTATTAAACCAAAATTGGGATTATCCGCTAAGAATTATGGTAGAGCAGTTTATGAATGTCTACGCGGTGGACTTGATTTTACCAAAGATGATGAAAACGTGAATTCCCAACCATTTATGCGTTGGAGAGACCGTTTCCTATTTTGTGCGGAAGCTATTTATAAATCCCAGGCGGAAACAGGTGAAATCAAAGGACATTACTTGAATGCTACTGCAGGTACATGCGAAGAAATGATCAAAGGGCTGTATTTGCCAGAGGGTGGGAGTTCCTATCGTAATGCATGACTACTTAACAGGTGGATTCACTGCAAATACTAGCTTGGCTCATTATTGCCGAGATAATGGTCTACTTCTTCACATTCACCGTGCAATGCATGCCGTTATTGATAGACAGAAGAATCATGGTATGCACTTCCGTGTACTAGCTAAAGCGTTACGTATGTCTGGTGGAGACCATATTCACGCTGGTACCGTAGTAGGGAAACTTGAAGGGGAAAGAGACATCACTTTAGGCTTTGTTGATTTACTACGTGATGATTTTATTGAAAAAGACCGAAGCCGCGGTATTTATTTCACTCAAGATTGGGTCTCTTTACCAGGTGTTCTGCCAGTGGCTTCCGGTGGTATTCACGTTTGGCATATGCCTGCTCTAACCGAGATTTTTGGAGATGATTCTGTACTACAATTCGGAGGAGGAACTTTGGGGCACCCTTGGGGTAATGCACCTGGTGCCGTAGCTAACCGAGTAGCTCTAGAAGCATGTGTACAAGCTCGTAATGAGGGACGTGATCTTGCTCGTGAGGGTAATGAAATTATCCGTGAGGCTGCTAAATGGAGTCCTGAACTAGCTGCTGCTTGTGAAGTATGGAAGGCGATCAAATTTGAATTTGAGGCAGTAGATACTTTGTAATCCCGTAATTACTCTTCGTTCTTTTAATTGACTTTCAATTAAACTAAACTCGGC

mRNA sequence

ATGAGTTGTAGGGAGGGACTTATGTCACCACAAACAGAGACTAAAGCAAGTGTTGGATTCAAAGCTGGTGTTAAAGATTATAAATTGACTTATTATACTCCTGAATATGAAACCAAAGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAACCGGGAGTTCCACCCGAGGAAGCAGGGGCCGCTGTAGCTGCTGAATCTTCTACTGGTACATGGACAACTGTGTGGACCGATGGGCTTACCAGTCTTGATCGTTACAAAGGCCGATGCTATGGCATCGAGCCTGTTGCTGGAGAAGAAAGTCAATTTATTGCTTATGTAGCTTATCCCCTAGACCTTTTTGAAGAAGGTTCTGTTACTAACATGTTTACTTCCATTGTGGGTAATGTATTTGGATTCAAGGCTCTACGCGCTCTACGTCTGGAGGATTTGCGAATCCCTACTGCTTATGTTAAAACTTTCCAAGGCCCACCTCACGGTATCCAGGTTGAAAGAGATAAATTGAACAAGTATGGTCGCCCTCTATTGGGATGTACTATTAAACCAAAATTGGGATTATCCGCTAAGAATTATGGTAGAGCAGTTTATGAATGTCTACGCGGTGGACTTGATTTTACCAAAGATGATGAAAACGTGAATTCCCAACCATTTATGCGTTGGAGAGACCGTTTCCTATTTTGTGCGGAAGCTATTTATAAATCCCAGGCGGAAACAGGTGAAATCAAAGGACATTACTTGAATGCTACTGCAGTTCCTATCGTAATGCATGACTACTTAACAGGTGGATTCACTGCAAATACTAGCTTGGCTCATTATTGCCGAGATAATGGTCTACTTCTTCACATTCACCGTGCAATGCATGCCGTTATTGATAGACAGAAGAATCATGGTATGCACTTCCGTGTACTAGCTAAAGCGTTACGTATGTCTGGTGGAGACCATATTCACGCTGGTACCGTAGTAGGGAAACTTGAAGGGGAAAGAGACATCACTTTAGGCTTTGTTGATTTACTACGTGATGATTTTATTGAAAAAGACCGAAGCCGCGGTATTTATTTCACTCAAGATTGGGTCTCTTTACCAGGTGTTCTGCCAGTGGCTTCCGGTGGTATTCACGTTTGGCATATGCCTGCTCTAACCGAGATTTTTGGAGATGATTCTGTACTACAATTCGGAGGAGGAACTTTGGGGCACCCTTGGGGTAATGCACCTGGTGCCGTAGCTAACCGAGTAGCTCTAGAAGCATGTGTACAAGCTCGTAATGAGGGACGTGATCTTGCTCGTGAGGGTAATGAAATTATCCGTGAGGCTGCTAAATGGAGTCCTGAACTAGCTGCTGCTTGTGAAGTATGGAAGGCGATCAAATTTGAATTTGAGGCAGTAGATACTTTGTAATCCCGTAATTACTCTTCGTTCTTTTAATTGACTTTCAATTAAACTAAACTCGGC

Coding sequence (CDS)

ATGAGTTGTAGGGAGGGACTTATGTCACCACAAACAGAGACTAAAGCAAGTGTTGGATTCAAAGCTGGTGTTAAAGATTATAAATTGACTTATTATACTCCTGAATATGAAACCAAAGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAACCGGGAGTTCCACCCGAGGAAGCAGGGGCCGCTGTAGCTGCTGAATCTTCTACTGGTACATGGACAACTGTGTGGACCGATGGGCTTACCAGTCTTGATCGTTACAAAGGCCGATGCTATGGCATCGAGCCTGTTGCTGGAGAAGAAAGTCAATTTATTGCTTATGTAGCTTATCCCCTAGACCTTTTTGAAGAAGGTTCTGTTACTAACATGTTTACTTCCATTGTGGGTAATGTATTTGGATTCAAGGCTCTACGCGCTCTACGTCTGGAGGATTTGCGAATCCCTACTGCTTATGTTAAAACTTTCCAAGGCCCACCTCACGGTATCCAGGTTGAAAGAGATAAATTGAACAAGTATGGTCGCCCTCTATTGGGATGTACTATTAAACCAAAATTGGGATTATCCGCTAAGAATTATGGTAGAGCAGTTTATGAATGTCTACGCGGTGGACTTGATTTTACCAAAGATGATGAAAACGTGAATTCCCAACCATTTATGCGTTGGAGAGACCGTTTCCTATTTTGTGCGGAAGCTATTTATAAATCCCAGGCGGAAACAGGTGAAATCAAAGGACATTACTTGAATGCTACTGCAGTTCCTATCGTAATGCATGACTACTTAACAGGTGGATTCACTGCAAATACTAGCTTGGCTCATTATTGCCGAGATAATGGTCTACTTCTTCACATTCACCGTGCAATGCATGCCGTTATTGATAGACAGAAGAATCATGGTATGCACTTCCGTGTACTAGCTAAAGCGTTACGTATGTCTGGTGGAGACCATATTCACGCTGGTACCGTAGTAGGGAAACTTGAAGGGGAAAGAGACATCACTTTAGGCTTTGTTGATTTACTACGTGATGATTTTATTGAAAAAGACCGAAGCCGCGGTATTTATTTCACTCAAGATTGGGTCTCTTTACCAGGTGTTCTGCCAGTGGCTTCCGGTGGTATTCACGTTTGGCATATGCCTGCTCTAACCGAGATTTTTGGAGATGATTCTGTACTACAATTCGGAGGAGGAACTTTGGGGCACCCTTGGGGTAATGCACCTGGTGCCGTAGCTAACCGAGTAGCTCTAGAAGCATGTGTACAAGCTCGTAATGAGGGACGTGATCTTGCTCGTGAGGGTAATGAAATTATCCGTGAGGCTGCTAAATGGAGTCCTGAACTAGCTGCTGCTTGTGAAGTATGGAAGGCGATCAAATTTGAATTTGAGGCAGTAGATACTTTGTAA

Protein sequence

MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYLNATAVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNEIIREAAKWSPELAAACEVWKAIKFEFEAVDTL

Homology

[Close]

BLAST of Sed0017424 vs. NCBI nr
Match: QKX48481.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Luffa acutangula] >QKX48567.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Luffa aegyptiaca])

HSP 1 Score: 947.6 bits (2448), Expect = 4.1e-272
Identity = 460/482 (95.44%), Postives = 465/482 (96.47%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEY+TKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYQTKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSV 120
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEE+Q+IAYVAYPLDLFEEGSV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYVAYPLDLFEEGSV 120

Query: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCT 180
           TNMFTSIVGNVFGFKALRALRLEDLRIPTAY+KTFQGPPHGIQVERDKLNKYGRPLLGCT
Sbjct: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYIKTFQGPPHGIQVERDKLNKYGRPLLGCT 180

Query: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240
           IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG
Sbjct: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240

Query: 241 EIKGHYLNATA-----------------VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300
           EIKGHYLNATA                 VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI
Sbjct: 241 EIKGHYLNATAGTCEEMMKRAIFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300

Query: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF 360
           HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF
Sbjct: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF 360

Query: 361 IEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN 420
           IEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN
Sbjct: 361 IEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN 420

Query: 421 APGAVANRVALEACVQARNEGRDLAREGNEIIREAAKWSPELAAACEVWKAIKFEFEAVD 466
           APGAVANRVALEACVQARNEGRDLAREGNEIIREA+KWSPELAAACEVWKAIKFEFEAVD
Sbjct: 421 APGAVANRVALEACVQARNEGRDLAREGNEIIREASKWSPELAAACEVWKAIKFEFEAVD 480

[Close]

BLAST of Sed0017424 vs. NCBI nr
Match: YP_009447458.1 (ribulose-1 [Cucurbita maxima] >YP_009505088.1 ribulose-1 [Cucurbita pepo] >ATY69901.1 ribulose-1 [Cucurbita maxima] >AWX90378.1 ribulose-1 [Cucurbita pepo] >QWV60848.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Cucurbita ficifolia])

HSP 1 Score: 945.3 bits (2442), Expect = 2.0e-271
Identity = 458/482 (95.02%), Postives = 464/482 (96.27%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSV 120
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPV GEE+Q+IAYVAYPLDLFEEGSV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYVAYPLDLFEEGSV 120

Query: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCT 180
           TNMFTSIVGNVFGFKALRALRLEDLRIPTAY+KTFQGPPHGIQVERDKLNKYGRPLLGCT
Sbjct: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYIKTFQGPPHGIQVERDKLNKYGRPLLGCT 180

Query: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240
           IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG
Sbjct: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240

Query: 241 EIKGHYLNATA-----------------VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300
           EIKGHYLNATA                 VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI
Sbjct: 241 EIKGHYLNATAGTCEEMMKRAIFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300

Query: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF 360
           HRAMHAVIDRQKNHGMHFRVLAKALR+SGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF
Sbjct: 301 HRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF 360

Query: 361 IEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN 420
           +EKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN
Sbjct: 361 VEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN 420

Query: 421 APGAVANRVALEACVQARNEGRDLAREGNEIIREAAKWSPELAAACEVWKAIKFEFEAVD 466
           APGAVANRVALEACVQARNEGRDLAREGNEIIREA+KWSPELAAACEVWKAIKFEFEAVD
Sbjct: 421 APGAVANRVALEACVQARNEGRDLAREGNEIIREASKWSPELAAACEVWKAIKFEFEAVD 480

[Close]

BLAST of Sed0017424 vs. NCBI nr
Match: YP_009447543.1 (ribulose-1 [Cucurbita moschata] >ATY69984.1 ribulose-1 [Cucurbita moschata])

HSP 1 Score: 943.7 bits (2438), Expect = 5.9e-271
Identity = 457/482 (94.81%), Postives = 463/482 (96.06%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSV 120
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPV GEE+Q+IAYVAYPLDLFEEGSV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYVAYPLDLFEEGSV 120

Query: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCT 180
           TNMFTSIVGNVFGFKALRALRLEDLRIPTAY+KTFQGPPHGIQVERDKLNKYGRPLLGCT
Sbjct: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYIKTFQGPPHGIQVERDKLNKYGRPLLGCT 180

Query: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240
           IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG
Sbjct: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240

Query: 241 EIKGHYLNATA-----------------VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300
           EIKGHYLNATA                  PIVMHDYLTGGFTANTSLAHYCRDNGLLLHI
Sbjct: 241 EIKGHYLNATAGTCEEMMKRAIFARELGAPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300

Query: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF 360
           HRAMHAVIDRQKNHGMHFRVLAKALR+SGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF
Sbjct: 301 HRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF 360

Query: 361 IEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN 420
           +EKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN
Sbjct: 361 VEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN 420

Query: 421 APGAVANRVALEACVQARNEGRDLAREGNEIIREAAKWSPELAAACEVWKAIKFEFEAVD 466
           APGAVANRVALEACVQARNEGRDLAREGNEIIREA+KWSPELAAACEVWKAIKFEFEAVD
Sbjct: 421 APGAVANRVALEACVQARNEGRDLAREGNEIIREASKWSPELAAACEVWKAIKFEFEAVD 480

[Close]

BLAST of Sed0017424 vs. NCBI nr
Match: YP_009525194.1 (ribulose bisophosphate carboxylase [Hodgsonia macrocarpa] >AXR94555.1 ribulose bisophosphate carboxylase [Hodgsonia macrocarpa] >AXR94641.1 ribulose bisophosphate carboxylase [Hodgsonia macrocarpa] >AXR94725.1 ribulose bisophosphate carboxylase [Hodgsonia macrocarpa] >AXR94810.1 ribulose bisophosphate carboxylase [Hodgsonia macrocarpa])

HSP 1 Score: 943.7 bits (2438), Expect = 5.9e-271
Identity = 458/482 (95.02%), Postives = 465/482 (96.47%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSV 120
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEE+Q+IAYVAYPLDLFEEGSV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYVAYPLDLFEEGSV 120

Query: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCT 180
           TNMFTSIVGNVFGFKALRALRLEDLRIPTAY+KTFQGPPHGIQVERDKLNKYGRPLLGCT
Sbjct: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYIKTFQGPPHGIQVERDKLNKYGRPLLGCT 180

Query: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240
           IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAI+KSQAETG
Sbjct: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIFKSQAETG 240

Query: 241 EIKGHYLNATA-----------------VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300
           EIKGHYLNATA                 VPIVMHDYLTGGFTANTSLA+YCRDNGLLLHI
Sbjct: 241 EIKGHYLNATAGTCEEMMKRAMCARELGVPIVMHDYLTGGFTANTSLAYYCRDNGLLLHI 300

Query: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF 360
           HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF
Sbjct: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF 360

Query: 361 IEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN 420
           IEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN
Sbjct: 361 IEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN 420

Query: 421 APGAVANRVALEACVQARNEGRDLAREGNEIIREAAKWSPELAAACEVWKAIKFEFEAVD 466
           APGAVANRVALEACVQARNEGRDLAREGNEIIREA+KWSPELAAACEVWKAIKFEF+AVD
Sbjct: 421 APGAVANRVALEACVQARNEGRDLAREGNEIIREASKWSPELAAACEVWKAIKFEFDAVD 480

[Close]

BLAST of Sed0017424 vs. NCBI nr
Match: QJD26653.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Trichosanthes rosthornii])

HSP 1 Score: 943.7 bits (2438), Expect = 5.9e-271
Identity = 457/482 (94.81%), Postives = 463/482 (96.06%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSV 120
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEE+Q+IAYVAYPLDLFEEGSV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYVAYPLDLFEEGSV 120

Query: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCT 180
           TNMFTSIVGNVFGFKALRALRLEDLRIPTAY+KTFQGPPHGIQVERDKLNKYGRPLLGCT
Sbjct: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYIKTFQGPPHGIQVERDKLNKYGRPLLGCT 180

Query: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240
           IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEA+YKSQAETG
Sbjct: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALYKSQAETG 240

Query: 241 EIKGHYLNATA-----------------VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300
           EIKGHYLNATA                  PIVMHDYLTGGFTANTSLAHYCRDNGLLLHI
Sbjct: 241 EIKGHYLNATAGTCEEMIKRAVFARELGAPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300

Query: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF 360
           HRAMHAVIDRQKNHGMHFRVLAK LR+SGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF
Sbjct: 301 HRAMHAVIDRQKNHGMHFRVLAKGLRLSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF 360

Query: 361 IEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN 420
           IEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN
Sbjct: 361 IEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN 420

Query: 421 APGAVANRVALEACVQARNEGRDLAREGNEIIREAAKWSPELAAACEVWKAIKFEFEAVD 466
           APGAVANRVALEACVQARNEGRDLAREGNEIIREA+KWSPELAAACEVWKAIKFEFEAVD
Sbjct: 421 APGAVANRVALEACVQARNEGRDLAREGNEIIREASKWSPELAAACEVWKAIKFEFEAVD 480

[Close]

BLAST of Sed0017424 vs. ExPASy Swiss-Prot
Match: P27064 (Ribulose bisphosphate carboxylase large chain OS=Cucumis sativus OX=3659 GN=rbcL PE=1 SV=5)

HSP 1 Score: 925.6 bits (2391), Expect = 2.2e-268
Identity = 448/475 (94.32%), Postives = 456/475 (96.00%), Query Frame = 0


Query: 8   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 67
           MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
Sbjct: 1   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 60

Query: 68  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSI 127
           SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEE+Q+IAYVAYPLDLFEEGSVTNMFTSI
Sbjct: 61  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSI 120

Query: 128 VGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL 187
           VGNVFGFKALRALRLEDLRIPTAY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL
Sbjct: 121 VGNVFGFKALRALRLEDLRIPTAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL 180

Query: 188 SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYL 247
           SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAI+KSQAETGEIKGHYL
Sbjct: 181 SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIFKSQAETGEIKGHYL 240

Query: 248 NATA-----------------VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV 307
           NATA                  PIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV
Sbjct: 241 NATAGTCEEMMKRAIFARELGAPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV 300

Query: 308 IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDFIEKDRSR 367
           IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGER+ITLGFVDLLRDDF+EKDRSR
Sbjct: 301 IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGEREITLGFVDLLRDDFVEKDRSR 360

Query: 368 GIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN 427
           GIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN
Sbjct: 361 GIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN 420

Query: 428 RVALEACVQARNEGRDLAREGNEIIREAAKWSPELAAACEVWKAIKFEFEAVDTL 466
           RVALEACVQARNEGRDLAREGNEIIREA+KWSPELAAACEVWK IKFEFEA+DTL
Sbjct: 421 RVALEACVQARNEGRDLAREGNEIIREASKWSPELAAACEVWKEIKFEFEAMDTL 475

[Close]

BLAST of Sed0017424 vs. ExPASy Swiss-Prot
Match: P27066 (Ribulose bisphosphate carboxylase large chain OS=Glycine max OX=3847 GN=rbcL PE=1 SV=3)

HSP 1 Score: 923.7 bits (2386), Expect = 8.3e-268
Identity = 445/475 (93.68%), Postives = 457/475 (96.21%), Query Frame = 0


Query: 8   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 67
           MSPQTETKASVGFKAGVKDYKLTYYTP+YETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
Sbjct: 1   MSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 60

Query: 68  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSI 127
           SSTGTWTTVWTDGLTSLDRYKGRCYG+EPVAGEE+Q+IAYVAYPLDLFEEGSVTNMFTSI
Sbjct: 61  SSTGTWTTVWTDGLTSLDRYKGRCYGLEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSI 120

Query: 128 VGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL 187
           VGNVFGFKALRALRLEDLRIPTAY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL
Sbjct: 121 VGNVFGFKALRALRLEDLRIPTAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL 180

Query: 188 SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYL 247
           SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAI+KSQAETGEIKGHYL
Sbjct: 181 SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIFKSQAETGEIKGHYL 240

Query: 248 NATA-----------------VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV 307
           NATA                 VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV
Sbjct: 241 NATAGTCEEMMKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV 300

Query: 308 IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDFIEKDRSR 367
           IDRQKNHGMHFRVLAKALR+SGGDH+HAGTVVGKLEGER+ITLGFVDLLRDDF+EKDRSR
Sbjct: 301 IDRQKNHGMHFRVLAKALRLSGGDHVHAGTVVGKLEGEREITLGFVDLLRDDFVEKDRSR 360

Query: 368 GIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN 427
           GIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN
Sbjct: 361 GIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN 420

Query: 428 RVALEACVQARNEGRDLAREGNEIIREAAKWSPELAAACEVWKAIKFEFEAVDTL 466
           RVALEACVQARNEGRDLAREGNEIIREA+KWSPELAAACEVWK IKFEFEA+DTL
Sbjct: 421 RVALEACVQARNEGRDLAREGNEIIREASKWSPELAAACEVWKEIKFEFEAMDTL 475

[Close]

BLAST of Sed0017424 vs. ExPASy Swiss-Prot
Match: Q0G9V4 (Ribulose bisphosphate carboxylase large chain OS=Daucus carota OX=4039 GN=rbcL PE=3 SV=1)

HSP 1 Score: 923.3 bits (2385), Expect = 1.1e-267
Identity = 448/475 (94.32%), Postives = 454/475 (95.58%), Query Frame = 0


Query: 8   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 67
           MSPQTETKA VGFKAGVKDYKLTYYTP+YETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
Sbjct: 1   MSPQTETKAGVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 60

Query: 68  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSI 127
           SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEE+QFIAYVAYPLDLFEEGSVTNMFTSI
Sbjct: 61  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQFIAYVAYPLDLFEEGSVTNMFTSI 120

Query: 128 VGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL 187
           VGNVFGFKALRALRLEDLRIP AYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL
Sbjct: 121 VGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL 180

Query: 188 SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYL 247
           SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYK+QAETGEIKGHYL
Sbjct: 181 SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYL 240

Query: 248 NATA-----------------VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV 307
           NATA                 VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV
Sbjct: 241 NATAGTCEEMMKRAIFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV 300

Query: 308 IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDFIEKDRSR 367
           IDRQKNHG+HFRVLAKALRMSGGDHIH+GTVVGKLEGERDITLGFVDLLRDDFIEKDRSR
Sbjct: 301 IDRQKNHGIHFRVLAKALRMSGGDHIHSGTVVGKLEGERDITLGFVDLLRDDFIEKDRSR 360

Query: 368 GIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN 427
           GIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN
Sbjct: 361 GIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN 420

Query: 428 RVALEACVQARNEGRDLAREGNEIIREAAKWSPELAAACEVWKAIKFEFEAVDTL 466
           RVALEACVQARNEGRDLAREGNEIIREA KWSPELAAACEVWK IKFEFEA+DTL
Sbjct: 421 RVALEACVQARNEGRDLAREGNEIIREATKWSPELAAACEVWKEIKFEFEAMDTL 475

[Close]

BLAST of Sed0017424 vs. ExPASy Swiss-Prot
Match: Q01873 (Ribulose bisphosphate carboxylase large chain OS=Liquidambar styraciflua OX=4400 GN=rbcL PE=3 SV=1)

HSP 1 Score: 922.9 bits (2384), Expect = 1.4e-267
Identity = 450/475 (94.74%), Postives = 454/475 (95.58%), Query Frame = 0


Query: 8   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 67
           MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
Sbjct: 1   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 60

Query: 68  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSI 127
           SSTGTWTTVWTDGLTSLDRYKGRCY IEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSI
Sbjct: 61  SSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSI 120

Query: 128 VGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL 187
           VGNVFGFKALRALRLEDLRIP AY KTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL
Sbjct: 121 VGNVFGFKALRALRLEDLRIPPAYSKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL 180

Query: 188 SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYL 247
           SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYK+QAETGEIKGHYL
Sbjct: 181 SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYL 240

Query: 248 NATA-----------------VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV 307
           NATA                 VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV
Sbjct: 241 NATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV 300

Query: 308 IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDFIEKDRSR 367
           IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGER+ITLGFVDLLRDDFIEKDRSR
Sbjct: 301 IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRSR 360

Query: 368 GIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN 427
           GIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN
Sbjct: 361 GIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN 420

Query: 428 RVALEACVQARNEGRDLAREGNEIIREAAKWSPELAAACEVWKAIKFEFEAVDTL 466
           RVALEACVQARNEGRDLAREGNEIIREA+KWSPELAAACEVWK IKFEFEA+DTL
Sbjct: 421 RVALEACVQARNEGRDLAREGNEIIREASKWSPELAAACEVWKEIKFEFEAMDTL 475

[Close]

BLAST of Sed0017424 vs. ExPASy Swiss-Prot
Match: B0Z4K9 (Ribulose bisphosphate carboxylase large chain OS=Oenothera argillicola OX=3940 GN=rbcL PE=3 SV=1)

HSP 1 Score: 922.2 bits (2382), Expect = 2.4e-267
Identity = 448/475 (94.32%), Postives = 454/475 (95.58%), Query Frame = 0


Query: 8   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 67
           MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
Sbjct: 1   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 60

Query: 68  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSI 127
           SSTGTWTTVWTDGLTSLDRYKGRCY IEPVAGEE+Q+I YVAYPLDLFEEGSVTNMFTSI
Sbjct: 61  SSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEENQYICYVAYPLDLFEEGSVTNMFTSI 120

Query: 128 VGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL 187
           VGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL
Sbjct: 121 VGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL 180

Query: 188 SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYL 247
           SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYL
Sbjct: 181 SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYL 240

Query: 248 NATA-----------------VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV 307
           NATA                 VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV
Sbjct: 241 NATAGTCEEMMKRAIFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV 300

Query: 308 IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDFIEKDRSR 367
           IDRQKNHG+HFRVLAKALRMSGGDHIH+GTVVGKLEGERDITLGFVDLLRDDFIEKDRSR
Sbjct: 301 IDRQKNHGIHFRVLAKALRMSGGDHIHSGTVVGKLEGERDITLGFVDLLRDDFIEKDRSR 360

Query: 368 GIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN 427
           GIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN
Sbjct: 361 GIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN 420

Query: 428 RVALEACVQARNEGRDLAREGNEIIREAAKWSPELAAACEVWKAIKFEFEAVDTL 466
           RVALEACVQARNEGRDLAREGNEIIREA KWSPELAAACEVWK IKFEF+A+DTL
Sbjct: 421 RVALEACVQARNEGRDLAREGNEIIREACKWSPELAAACEVWKEIKFEFQAMDTL 475

[Close]

BLAST of Sed0017424 vs. ExPASy TrEMBL
Match: A0A7D4XNS8 (Ribulose bisphosphate carboxylase large chain OS=Luffa acutangula OX=56866 GN=rbcL PE=3 SV=1)

HSP 1 Score: 947.6 bits (2448), Expect = 2.0e-272
Identity = 460/482 (95.44%), Postives = 465/482 (96.47%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEY+TKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYQTKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSV 120
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEE+Q+IAYVAYPLDLFEEGSV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYVAYPLDLFEEGSV 120

Query: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCT 180
           TNMFTSIVGNVFGFKALRALRLEDLRIPTAY+KTFQGPPHGIQVERDKLNKYGRPLLGCT
Sbjct: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYIKTFQGPPHGIQVERDKLNKYGRPLLGCT 180

Query: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240
           IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG
Sbjct: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240

Query: 241 EIKGHYLNATA-----------------VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300
           EIKGHYLNATA                 VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI
Sbjct: 241 EIKGHYLNATAGTCEEMMKRAIFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300

Query: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF 360
           HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF
Sbjct: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF 360

Query: 361 IEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN 420
           IEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN
Sbjct: 361 IEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN 420

Query: 421 APGAVANRVALEACVQARNEGRDLAREGNEIIREAAKWSPELAAACEVWKAIKFEFEAVD 466
           APGAVANRVALEACVQARNEGRDLAREGNEIIREA+KWSPELAAACEVWKAIKFEFEAVD
Sbjct: 421 APGAVANRVALEACVQARNEGRDLAREGNEIIREASKWSPELAAACEVWKAIKFEFEAVD 480

[Close]

BLAST of Sed0017424 vs. ExPASy TrEMBL
Match: A0A7D4XNL6 (Ribulose bisphosphate carboxylase large chain OS=Luffa aegyptiaca OX=3670 GN=rbcL PE=3 SV=1)

HSP 1 Score: 947.6 bits (2448), Expect = 2.0e-272
Identity = 460/482 (95.44%), Postives = 465/482 (96.47%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEY+TKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYQTKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSV 120
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEE+Q+IAYVAYPLDLFEEGSV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYVAYPLDLFEEGSV 120

Query: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCT 180
           TNMFTSIVGNVFGFKALRALRLEDLRIPTAY+KTFQGPPHGIQVERDKLNKYGRPLLGCT
Sbjct: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYIKTFQGPPHGIQVERDKLNKYGRPLLGCT 180

Query: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240
           IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG
Sbjct: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240

Query: 241 EIKGHYLNATA-----------------VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300
           EIKGHYLNATA                 VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI
Sbjct: 241 EIKGHYLNATAGTCEEMMKRAIFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300

Query: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF 360
           HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF
Sbjct: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF 360

Query: 361 IEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN 420
           IEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN
Sbjct: 361 IEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN 420

Query: 421 APGAVANRVALEACVQARNEGRDLAREGNEIIREAAKWSPELAAACEVWKAIKFEFEAVD 466
           APGAVANRVALEACVQARNEGRDLAREGNEIIREA+KWSPELAAACEVWKAIKFEFEAVD
Sbjct: 421 APGAVANRVALEACVQARNEGRDLAREGNEIIREASKWSPELAAACEVWKAIKFEFEAVD 480

[Close]

BLAST of Sed0017424 vs. ExPASy TrEMBL
Match: A0A2H4T203 (Ribulose bisphosphate carboxylase large chain OS=Cucurbita maxima OX=3661 GN=rbcL PE=3 SV=1)

HSP 1 Score: 945.3 bits (2442), Expect = 9.8e-272
Identity = 458/482 (95.02%), Postives = 464/482 (96.27%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSV 120
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPV GEE+Q+IAYVAYPLDLFEEGSV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYVAYPLDLFEEGSV 120

Query: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCT 180
           TNMFTSIVGNVFGFKALRALRLEDLRIPTAY+KTFQGPPHGIQVERDKLNKYGRPLLGCT
Sbjct: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYIKTFQGPPHGIQVERDKLNKYGRPLLGCT 180

Query: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240
           IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG
Sbjct: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240

Query: 241 EIKGHYLNATA-----------------VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300
           EIKGHYLNATA                 VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI
Sbjct: 241 EIKGHYLNATAGTCEEMMKRAIFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300

Query: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF 360
           HRAMHAVIDRQKNHGMHFRVLAKALR+SGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF
Sbjct: 301 HRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF 360

Query: 361 IEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN 420
           +EKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN
Sbjct: 361 VEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN 420

Query: 421 APGAVANRVALEACVQARNEGRDLAREGNEIIREAAKWSPELAAACEVWKAIKFEFEAVD 466
           APGAVANRVALEACVQARNEGRDLAREGNEIIREA+KWSPELAAACEVWKAIKFEFEAVD
Sbjct: 421 APGAVANRVALEACVQARNEGRDLAREGNEIIREASKWSPELAAACEVWKAIKFEFEAVD 480

[Close]

BLAST of Sed0017424 vs. ExPASy TrEMBL
Match: A0A344AXQ3 (Ribulose bisphosphate carboxylase large chain OS=Cucurbita pepo OX=3663 GN=rbcL PE=3 SV=1)

HSP 1 Score: 945.3 bits (2442), Expect = 9.8e-272
Identity = 458/482 (95.02%), Postives = 464/482 (96.27%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSV 120
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPV GEE+Q+IAYVAYPLDLFEEGSV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYVAYPLDLFEEGSV 120

Query: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCT 180
           TNMFTSIVGNVFGFKALRALRLEDLRIPTAY+KTFQGPPHGIQVERDKLNKYGRPLLGCT
Sbjct: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYIKTFQGPPHGIQVERDKLNKYGRPLLGCT 180

Query: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240
           IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG
Sbjct: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240

Query: 241 EIKGHYLNATA-----------------VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300
           EIKGHYLNATA                 VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI
Sbjct: 241 EIKGHYLNATAGTCEEMMKRAIFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300

Query: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF 360
           HRAMHAVIDRQKNHGMHFRVLAKALR+SGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF
Sbjct: 301 HRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF 360

Query: 361 IEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN 420
           +EKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN
Sbjct: 361 VEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN 420

Query: 421 APGAVANRVALEACVQARNEGRDLAREGNEIIREAAKWSPELAAACEVWKAIKFEFEAVD 466
           APGAVANRVALEACVQARNEGRDLAREGNEIIREA+KWSPELAAACEVWKAIKFEFEAVD
Sbjct: 421 APGAVANRVALEACVQARNEGRDLAREGNEIIREASKWSPELAAACEVWKAIKFEFEAVD 480

[Close]

BLAST of Sed0017424 vs. ExPASy TrEMBL
Match: A0A346QN70 (Ribulose bisphosphate carboxylase large chain OS=Hodgsonia macrocarpa OX=2184935 GN=rbcL PE=3 SV=1)

HSP 1 Score: 943.7 bits (2438), Expect = 2.8e-271
Identity = 458/482 (95.02%), Postives = 465/482 (96.47%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSV 120
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEE+Q+IAYVAYPLDLFEEGSV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYVAYPLDLFEEGSV 120

Query: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCT 180
           TNMFTSIVGNVFGFKALRALRLEDLRIPTAY+KTFQGPPHGIQVERDKLNKYGRPLLGCT
Sbjct: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYIKTFQGPPHGIQVERDKLNKYGRPLLGCT 180

Query: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240
           IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAI+KSQAETG
Sbjct: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIFKSQAETG 240

Query: 241 EIKGHYLNATA-----------------VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300
           EIKGHYLNATA                 VPIVMHDYLTGGFTANTSLA+YCRDNGLLLHI
Sbjct: 241 EIKGHYLNATAGTCEEMMKRAMCARELGVPIVMHDYLTGGFTANTSLAYYCRDNGLLLHI 300

Query: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF 360
           HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF
Sbjct: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF 360

Query: 361 IEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN 420
           IEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN
Sbjct: 361 IEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN 420

Query: 421 APGAVANRVALEACVQARNEGRDLAREGNEIIREAAKWSPELAAACEVWKAIKFEFEAVD 466
           APGAVANRVALEACVQARNEGRDLAREGNEIIREA+KWSPELAAACEVWKAIKFEF+AVD
Sbjct: 421 APGAVANRVALEACVQARNEGRDLAREGNEIIREASKWSPELAAACEVWKAIKFEFDAVD 480

[Close]

BLAST of Sed0017424 vs. TAIR 10
Match: ATCG00490.1 (ribulose-bisphosphate carboxylases )

HSP 1 Score: 896.0 bits (2314), Expect = 1.3e-260
Identity = 434/475 (91.37%), Postives = 444/475 (93.47%), Query Frame = 0


Query: 8   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 67
           MSPQTETKASVGFKAGVK+YKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
Sbjct: 1   MSPQTETKASVGFKAGVKEYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 60

Query: 68  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSI 127
           SSTGTWTTVWTDGLTSLDRYKGRCY IEPV GEE+QFIAYVAYPLDLFEEGSVTNMFTSI
Sbjct: 61  SSTGTWTTVWTDGLTSLDRYKGRCYHIEPVPGEETQFIAYVAYPLDLFEEGSVTNMFTSI 120

Query: 128 VGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL 187
           VGNVFGFKAL ALRLEDLRIP AY KTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL
Sbjct: 121 VGNVFGFKALAALRLEDLRIPPAYTKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL 180

Query: 188 SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYL 247
           SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYL
Sbjct: 181 SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYL 240

Query: 248 NATA-----------------VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV 307
           NATA                 VPIVMHDYLTGGFTANTSL+HYCRDNGLLLHIHRAMHAV
Sbjct: 241 NATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLSHYCRDNGLLLHIHRAMHAV 300

Query: 308 IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDFIEKDRSR 367
           IDRQKNHGMHFRVLAKALR+SGGDHIHAGTVVGKLEG+R+ TLGFVDLLRDD++EKDRSR
Sbjct: 301 IDRQKNHGMHFRVLAKALRLSGGDHIHAGTVVGKLEGDRESTLGFVDLLRDDYVEKDRSR 360

Query: 368 GIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN 427
           GI+FTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN
Sbjct: 361 GIFFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN 420

Query: 428 RVALEACVQARNEGRDLAREGNEIIREAAKWSPELAAACEVWKAIKFEFEAVDTL 466
           RVALEACVQARNEGRDLA EGNEIIREA KWSPELAAACEVWK I F F  +D L
Sbjct: 421 RVALEACVQARNEGRDLAVEGNEIIREACKWSPELAAACEVWKEITFNFPTIDKL 475

[Close]

BLAST of Sed0017424 vs. TAIR 10
Match: AT2G07732.1 (Ribulose bisphosphate carboxylase large chain, catalytic domain )

HSP 1 Score: 162.9 bits (411), Expect = 6.1e-40
Identity = 79/101 (78.22%), Postives = 81/101 (80.20%), Query Frame = 0


Query: 189 AKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYLN 248
           AKNYGRAVYECLRGGL FTKDDENVNSQPFMRWRDRFLFCAEA+YK+QAETG IKGHYLN
Sbjct: 14  AKNYGRAVYECLRGGLYFTKDDENVNSQPFMRWRDRFLFCAEAVYKAQAETGGIKGHYLN 73

Query: 249 AT-----------------AVPIVMHDYLTGGFTANTSLAH 273
           AT                  VPIVMHDYLTGGFTANTSLAH
Sbjct: 74  ATPGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAH 114

[Close]

BLAST of Sed0017424 vs. TAIR 10
Match: ATMG00280.1 (Ribulose bisphosphate carboxylase large chain, catalytic domain )

HSP 1 Score: 141.7 bits (356), Expect = 1.4e-33
Identity = 69/92 (75.00%), Postives = 71/92 (77.17%), Query Frame = 0


Query: 189 AKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYLN 248
           AKNYGRAVYECLRGGL FTKDDENVNSQPFMRWRDRFLFCAEA+YK+QAETG IKGHYLN
Sbjct: 14  AKNYGRAVYECLRGGLYFTKDDENVNSQPFMRWRDRFLFCAEAVYKAQAETGGIKGHYLN 73

Query: 249 ATA-----------------VPIVMHDYLTGG 264
           ATA                 VPIVMHDYL  G
Sbjct: 74  ATAGTCEEMIKRAVFARELGVPIVMHDYLNRG 105

The following BLAST results are available for this feature:

BLAST of Sed0017424 vs. NCBI nr


Match Name	E-value	Identity	Description
QKX48481.1	4.1e-272	95.44	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Luffa acutangula]...	[more]
YP_009447458.1	2.0e-271	95.02	ribulose-1 [Cucurbita maxima] >YP_009505088.1 ribulose-1 [Cucurbita pepo] >ATY69...	[more]
YP_009447543.1	5.9e-271	94.81	ribulose-1 [Cucurbita moschata] >ATY69984.1 ribulose-1 [Cucurbita moschata]	[more]
YP_009525194.1	5.9e-271	95.02	ribulose bisophosphate carboxylase [Hodgsonia macrocarpa] >AXR94555.1 ribulose b...	[more]
QJD26653.1	5.9e-271	94.81	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Trichosanthes ros...	[more]

BLAST of Sed0017424 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27064	2.2e-268	94.32	Ribulose bisphosphate carboxylase large chain OS=Cucumis sativus OX=3659 GN=rbcL...	[more]
P27066	8.3e-268	93.68	Ribulose bisphosphate carboxylase large chain OS=Glycine max OX=3847 GN=rbcL PE=...	[more]
Q0G9V4	1.1e-267	94.32	Ribulose bisphosphate carboxylase large chain OS=Daucus carota OX=4039 GN=rbcL P...	[more]
Q01873	1.4e-267	94.74	Ribulose bisphosphate carboxylase large chain OS=Liquidambar styraciflua OX=4400...	[more]
B0Z4K9	2.4e-267	94.32	Ribulose bisphosphate carboxylase large chain OS=Oenothera argillicola OX=3940 G...	[more]

BLAST of Sed0017424 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7D4XNS8	2.0e-272	95.44	Ribulose bisphosphate carboxylase large chain OS=Luffa acutangula OX=56866 GN=rb...	[more]
A0A7D4XNL6	2.0e-272	95.44	Ribulose bisphosphate carboxylase large chain OS=Luffa aegyptiaca OX=3670 GN=rbc...	[more]
A0A2H4T203	9.8e-272	95.02	Ribulose bisphosphate carboxylase large chain OS=Cucurbita maxima OX=3661 GN=rbc...	[more]
A0A344AXQ3	9.8e-272	95.02	Ribulose bisphosphate carboxylase large chain OS=Cucurbita pepo OX=3663 GN=rbcL ...	[more]
A0A346QN70	2.8e-271	95.02	Ribulose bisphosphate carboxylase large chain OS=Hodgsonia macrocarpa OX=2184935...	[more]

BLAST of Sed0017424 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00490.1	1.3e-260	91.37	ribulose-bisphosphate carboxylases	[more]
AT2G07732.1	6.1e-40	78.22	Ribulose bisphosphate carboxylase large chain, catalytic domain	[more]
ATMG00280.1	1.4e-33	75.00	Ribulose bisphosphate carboxylase large chain, catalytic domain	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000685	Ribulose bisphosphate carboxylase, large subunit, C-terminal	PFAM	PF00016	RuBisCO_large	coord: 161..452 e-value: 3.0E-114 score: 381.3
IPR036376	Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily	GENE3D	3.20.20.110		coord: 157..465 e-value: 3.0E-138 score: 462.2
IPR036376	Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily	SUPERFAMILY	51649	RuBisCo, C-terminal domain	coord: 155..464
IPR017443	Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal	PFAM	PF02788	RuBisCO_large_N	coord: 31..151 e-value: 1.4E-44 score: 151.2
IPR036422	RuBisCO large subunit, N-terminal domain superfamily	GENE3D	3.30.70.150		coord: 16..154 e-value: 4.9E-61 score: 206.6
IPR036422	RuBisCO large subunit, N-terminal domain superfamily	SUPERFAMILY	54966	RuBisCO, large subunit, small (N-terminal) domain	coord: 16..156
None	No IPR available	SFLD	SFLDG00301	RuBisCO-like_proteins	coord: 42..422 e-value: 0.0 score: 196.9
None	No IPR available	SFLD	SFLDG01052	RuBisCO	coord: 20..454 e-value: 0.0 score: 763.9
None	No IPR available	PANTHER	PTHR42704:SF8	RIBULOSE BISPHOSPHATE CARBOXYLASE, LARGE SUBUNIT-RELATED	coord: 1..464
IPR033966	RuBisCO	SFLD	SFLDS00014	RuBisCO	coord: 20..454 e-value: 0.0 score: 763.9
IPR033966	RuBisCO	PANTHER	PTHR42704	RIBULOSE BISPHOSPHATE CARBOXYLASE	coord: 1..464
IPR020878	Ribulose bisphosphate carboxylase, large chain, active site	PROSITE	PS00157	RUBISCO_LARGE	coord: 203..211
IPR020888	Ribulose bisphosphate carboxylase large subunit, type I	HAMAP	MF_01338	RuBisCO_L_type1	coord: 16..465 score: 57.577076
IPR020888	Ribulose bisphosphate carboxylase large subunit, type I	CDD	cd08212	RuBisCO_large_I	coord: 30..463 e-value: 0.0 score: 905.259

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017424.1	Sed0017424.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009853	photorespiration
biological_process	GO:0019253	reductive pentose-phosphate cycle
biological_process	GO:0015977	carbon fixation
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0016984	ribulose-bisphosphate carboxylase activity