Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTTGTGATTGTGTATTAGTTAATGGCTGGTCCAATGCCACGTCCATGGTTCCGTTTAGGTTCTTTTACTCGACCAACAACAACAGCCACGCCCGCTGCTCCTGCGACCGAACAACCGCGCCCGGTTCCTCCCCGAATCCGACCTCTCTTGATCCGACCCGCCGCTGCAACGGAGCCATCACAACCCACTACCCCACAGCCTCCCAAATCCCCACCGCAGCCGCCTCGCCCAGCCCTGCAAACCCCACTGGTAAAAAAAGAAGCATCGCCACCGCCGACTGTCGCCAAAACATTGACCAAACCTGTTTTGCCAATGCTCGCAAGGCCTGTCGTTCCGTCGCCGTCGAATGTACCGAAAGCTGACACTGCCGCGGCAAAACCCAGTAGCCCGAAGGGGCGAAGTTCTTCAGTTGCTGCATCTCCGCCCCAAACTGAGTTGCTTGATAAAGATAGCAGAAAAAACCCTAGCCCGGTTCCATCTCCTTCGATTCCAAAGTCTATTCCAGCGGTTCCGTCGCCTTACCAGTCGCCAAAGCCGAAGGCTGCAGCTTTGCCACCGTCGCCGCTGCTGTTGCCGCTGCCGCAATTGCAGCCCGTTGCTGAACCTACGCTTGAGACCATTCCGCAAGAGGTAATGTAGTGTTAATTTTACTTTATTTATTCCAAGGTGGTTTTTTTTTAAATGAAATTGGAAGGCATTTTAAATAATAGTTAAAAATAAAAATAGAGAAATCATGAGTGAGAATTGTGTTTATAGTTTTAGAATTTAAAAAAAAAAAGAATTTTAGAACAATATCAAGCAATGTCATGTTTGTATACATAATAGAAATCATTTAGCCGGCATCAATGTATTCCTATAATTCAGAAGAGACAGGTTCGAGTCTCTCTTCCCTAAGTTATAAATATGAAGAATAATTCAGACGAGGTATAGACAATCTTCACATTCATATGAACTTGTTATTTACTTTCATTTACTTTTATTTCTATCCAAACATATATCTTATAGTCCAGTCGCATGTGATATAGCTAGACAACAAAGTCGTAGCAAAGATTATATTCTAACTTGTGCTCACGAGAAAAATACCTAAACAATTCTTGCAGATTGGAATACATATTTTCAAAGTTTAAGTACCAAAATACTCTTTAAAGGACAAAAGAAATAATTACACAAGACTCTAGATACTTGAGAAAAAATACATATTTTACCCTTAAAACATGGTAATCAAATATAACTAAAAGAGCAGACAAATTTTAAAATTGTTCCAAATTGAAATAATTAGAAAAACAAGACAGTCAAAAAGTTAAAATAATCAACAATATTCTCCACAGGTTGAAAGGAAAACAGTGGTTTTCCAAAAGGTGATGGAGAAGCCTTCCCCACCTGATCATAATCACAATAACAAGAAGCAAGAACCGAAGAAAAATGATATCTATAAAGAAAAAGAGAAAGGAAATGGAGCTAAAAAAGCCGAGGAGAAAGATTCAAACCCGAGAGTCATAACAATGGCGGGCGAAAATAGAGGAGCTTCCATGGAAGTAGTACTCTCAGACAAAAGCGACAGCGGCAGCGACGAAAGCAAAGACAAGGAAGGTAAAAAGAAATCGATGGGGACTCGAAATGTACACCCAATGAAAGCTTTCTGTAACAGCAATGTTCAAGGGATTAACAATTCCATTCTCATGAACTCCAATTTCTCCCACCATGATCCTGGCATTCACCTCGTTTTTTCGAGGATGCCACCAGTCGATGACGAAGACAAAGACAAAGACAAAGACAAGGAAAAACAATGAAAGTTGTGTTCTTATCTCTGATTTGAGTCTCTATGTTTATTATTATCATATATCTATCTTAATTTTTTTTTTTTTTTAGTTTGATAAATATGTTGTTTGTTTGAGAGAATAAGAAAATGAGAGTTAACTCGTAATAGAGACTGAAAAAAGATTCTGGCTTGTTAATGTTTACTTTAATGCATATAATAAAATGGGCTGACTTTTCTGTTTTAAAA
mRNA sequence
ATTTTGTGATTGTGTATTAGTTAATGGCTGGTCCAATGCCACGTCCATGGTTCCGTTTAGGTTCTTTTACTCGACCAACAACAACAGCCACGCCCGCTGCTCCTGCGACCGAACAACCGCGCCCGGTTCCTCCCCGAATCCGACCTCTCTTGATCCGACCCGCCGCTGCAACGGAGCCATCACAACCCACTACCCCACAGCCTCCCAAATCCCCACCGCAGCCGCCTCGCCCAGCCCTGCAAACCCCACTGGTAAAAAAAGAAGCATCGCCACCGCCGACTGTCGCCAAAACATTGACCAAACCTGTTTTGCCAATGCTCGCAAGGCCTGTCGTTCCGTCGCCGTCGAATGTACCGAAAGCTGACACTGCCGCGGCAAAACCCAGTAGCCCGAAGGGGCGAAGTTCTTCAGTTGCTGCATCTCCGCCCCAAACTGAGTTGCTTGATAAAGATAGCAGAAAAAACCCTAGCCCGGTTCCATCTCCTTCGATTCCAAAGTCTATTCCAGCGGTTCCGTCGCCTTACCAGTCGCCAAAGCCGAAGGCTGCAGCTTTGCCACCGTCGCCGCTGCTGTTGCCGCTGCCGCAATTGCAGCCCGTTGCTGAACCTACGCTTGAGACCATTCCGCAAGAGGTTGAAAGGAAAACAGTGGTTTTCCAAAAGGTGATGGAGAAGCCTTCCCCACCTGATCATAATCACAATAACAAGAAGCAAGAACCGAAGAAAAATGATATCTATAAAGAAAAAGAGAAAGGAAATGGAGCTAAAAAAGCCGAGGAGAAAGATTCAAACCCGAGAGTCATAACAATGGCGGGCGAAAATAGAGGAGCTTCCATGGAAGTAGTACTCTCAGACAAAAGCGACAGCGGCAGCGACGAAAGCAAAGACAAGGAAGGTAAAAAGAAATCGATGGGGACTCGAAATGTACACCCAATGAAAGCTTTCTGTAACAGCAATGTTCAAGGGATTAACAATTCCATTCTCATGAACTCCAATTTCTCCCACCATGATCCTGGCATTCACCTCGTTTTTTCGAGGATGCCACCAGTCGATGACGAAGACAAAGACAAAGACAAAGACAAGGAAAAACAATGAAAGTTGTGTTCTTATCTCTGATTTGAGTCTCTATGTTTATTATTATCATATATCTATCTTAATTTTTTTTTTTTTTTAGTTTGATAAATATGTTGTTTGTTTGAGAGAATAAGAAAATGAGAGTTAACTCGTAATAGAGACTGAAAAAAGATTCTGGCTTGTTAATGTTTACTTTAATGCATATAATAAAATGGGCTGACTTTTCTGTTTTAAAA
Coding sequence (CDS)
ATGGCTGGTCCAATGCCACGTCCATGGTTCCGTTTAGGTTCTTTTACTCGACCAACAACAACAGCCACGCCCGCTGCTCCTGCGACCGAACAACCGCGCCCGGTTCCTCCCCGAATCCGACCTCTCTTGATCCGACCCGCCGCTGCAACGGAGCCATCACAACCCACTACCCCACAGCCTCCCAAATCCCCACCGCAGCCGCCTCGCCCAGCCCTGCAAACCCCACTGGTAAAAAAAGAAGCATCGCCACCGCCGACTGTCGCCAAAACATTGACCAAACCTGTTTTGCCAATGCTCGCAAGGCCTGTCGTTCCGTCGCCGTCGAATGTACCGAAAGCTGACACTGCCGCGGCAAAACCCAGTAGCCCGAAGGGGCGAAGTTCTTCAGTTGCTGCATCTCCGCCCCAAACTGAGTTGCTTGATAAAGATAGCAGAAAAAACCCTAGCCCGGTTCCATCTCCTTCGATTCCAAAGTCTATTCCAGCGGTTCCGTCGCCTTACCAGTCGCCAAAGCCGAAGGCTGCAGCTTTGCCACCGTCGCCGCTGCTGTTGCCGCTGCCGCAATTGCAGCCCGTTGCTGAACCTACGCTTGAGACCATTCCGCAAGAGGTTGAAAGGAAAACAGTGGTTTTCCAAAAGGTGATGGAGAAGCCTTCCCCACCTGATCATAATCACAATAACAAGAAGCAAGAACCGAAGAAAAATGATATCTATAAAGAAAAAGAGAAAGGAAATGGAGCTAAAAAAGCCGAGGAGAAAGATTCAAACCCGAGAGTCATAACAATGGCGGGCGAAAATAGAGGAGCTTCCATGGAAGTAGTACTCTCAGACAAAAGCGACAGCGGCAGCGACGAAAGCAAAGACAAGGAAGGTAAAAAGAAATCGATGGGGACTCGAAATGTACACCCAATGAAAGCTTTCTGTAACAGCAATGTTCAAGGGATTAACAATTCCATTCTCATGAACTCCAATTTCTCCCACCATGATCCTGGCATTCACCTCGTTTTTTCGAGGATGCCACCAGTCGATGACGAAGACAAAGACAAAGACAAAGACAAGGAAAAACAATGA
Protein sequence
MAGPMPRPWFRLGSFTRPTTTATPAAPATEQPRPVPPRIRPLLIRPAAATEPSQPTTPQPPKSPPQPPRPALQTPLVKKEASPPPTVAKTLTKPVLPMLARPVVPSPSNVPKADTAAAKPSSPKGRSSSVAASPPQTELLDKDSRKNPSPVPSPSIPKSIPAVPSPYQSPKPKAAALPPSPLLLPLPQLQPVAEPTLETIPQEVERKTVVFQKVMEKPSPPDHNHNNKKQEPKKNDIYKEKEKGNGAKKAEEKDSNPRVITMAGENRGASMEVVLSDKSDSGSDESKDKEGKKKSMGTRNVHPMKAFCNSNVQGINNSILMNSNFSHHDPGIHLVFSRMPPVDDEDKDKDKDKEKQ
Homology
BLAST of Sed0017381 vs. NCBI nr
Match:
XP_022964490.1 (extensin-like [Cucurbita moschata] >KAG6593605.1 hypothetical protein SDJN03_13081, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025952.1 hypothetical protein SDJN02_12450, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 347.4 bits (890), Expect = 1.4e-91
Identity = 235/375 (62.67%), Postives = 266/375 (70.93%), Query Frame = 0
Query: 1 MAGPMPRPWFRLGSFTRPTTTATPAAPATEQPRPVPPRIRPLLIRPAAATEPSQPTTP-Q 60
MAG +PRPWFRLGS TRP TTAT AP T+QPRPVPPRIRP LIR ++ TE ++PTTP Q
Sbjct: 1 MAGQVPRPWFRLGSMTRP-TTATTTAPVTDQPRPVPPRIRPPLIRTSSLTELAEPTTPQQ 60
Query: 61 PPKSPPQPPRPALQTPLVKKEASPPPTVAKTLTKPVLPMLARPVVPSPSNVPKADTAAAK 120
KSPPQ PR A TP KKEASPPP P L RPVV S TAA K
Sbjct: 61 SAKSPPQLPRLAPLTPQPKKEASPPPPP---------PPLTRPVVTS--------TAAPK 120
Query: 121 PSSPKGRSSSVAASPPQTELLDKDSRKNPSPVPSPSIPKSIPAVPSPYQS--PKPKAAAL 180
PSSPKG+S S+ SPP+ DK+S K+P+P PSPSIPKSIPAVPSPYQS PKPKA A
Sbjct: 121 PSSPKGKSHSLGGSPPRNGSFDKESNKHPTPAPSPSIPKSIPAVPSPYQSPKPKPKATAS 180
Query: 181 PPSPLLLPLPQLQPVAEPTLETIPQEVERKTVVFQKVMEKPSPPDHNHNNKKQEP----- 240
PPSPL+LP PQLQ VAEP ETIPQEVERKTVVFQKVMEKPSPPDH+ NN +
Sbjct: 181 PPSPLVLPPPQLQFVAEPRPETIPQEVERKTVVFQKVMEKPSPPDHDINNYNSQASGFGK 240
Query: 241 --KKNDIYKEKEKGNGAKK----AEEKDSNPRVITMAGENRGASMEVVLSDK-------- 300
KK+D ++KGNGAKK + +KDS+ RVITMAGENRGASMEVVLSDK
Sbjct: 241 NGKKHD--DNQDKGNGAKKPFVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQ 300
Query: 301 ---SDSG--SDESKDKEGKKKSMGTRNVHPMKAFCNSNVQGINNSILMNSNFSHHDPGIH 349
SD+G +++SKD + KKS R+ PMKAF NSNVQGINNSILM+S F+HHDPGIH
Sbjct: 301 INQSDNGDTTNDSKDNKSNKKSTACRSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIH 355
BLAST of Sed0017381 vs. NCBI nr
Match:
XP_023513718.1 (proline-rich receptor-like protein kinase PERK8 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 342.0 bits (876), Expect = 6.0e-90
Identity = 230/375 (61.33%), Postives = 262/375 (69.87%), Query Frame = 0
Query: 1 MAGPMPRPWFRLGSFTRPTTTATPAAPATEQPRPVPPRIRPLLIRPAAATEPSQPTTP-Q 60
MAG +PRPWFRLGS TRP TTAT AP T+QPRP PPR+RP LIR + TE ++PTTP Q
Sbjct: 1 MAGQVPRPWFRLGSMTRP-TTATTTAPPTDQPRPAPPRMRPPLIRTTSLTELAEPTTPQQ 60
Query: 61 PPKSPPQPPRPALQTPLVKKEASPPPTVAKTLTKPVLPMLARPVVPSPSNVPKADTAAAK 120
KSPPQ PR A TP KKEASPPP P L RPVV S TAA K
Sbjct: 61 SAKSPPQLPRLAPLTPQPKKEASPPPPP---------PPLTRPVVTS--------TAAPK 120
Query: 121 PSSPKGRSSSVAASPPQTELLDKDSRKNPSPVPSPSIPKSIPAVPSPYQS--PKPKAAAL 180
PSSPKG+S S+ SPP+ DK+S K+P+P PSPSIPKSIPAVPSPYQS PKPKA A
Sbjct: 121 PSSPKGKSHSLGGSPPRNGSFDKESNKHPTPAPSPSIPKSIPAVPSPYQSPKPKPKATAS 180
Query: 181 PPSPLLLPLPQLQPVAEPTLETIPQEVERKTVVFQKVMEKPSPPDHNHNNKKQEP----- 240
PPSPL+LP PQLQ VAEP ETIPQEVERKTVVFQKVMEKPSPPDH+ NN +
Sbjct: 181 PPSPLVLPPPQLQFVAEPRPETIPQEVERKTVVFQKVMEKPSPPDHDINNYNSQASGFGK 240
Query: 241 --KKNDIYKEKEKGNGAKK----AEEKDSNPRVITMAGENRGASMEVVLSDKSDSG---- 300
KK+D ++KGNGAKK + +KDS+ RVITMAGENRGASMEVVLSDK+++
Sbjct: 241 NGKKHD--DNQDKGNGAKKPFVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQ 300
Query: 301 ---------SDESKDKEGKKKSMGTRNVHPMKAFCNSNVQGINNSILMNSNFSHHDPGIH 349
+++SKD + KKS R PMKAF NSNVQGINNSILM+S F+HHDPGIH
Sbjct: 301 TNQSDKEETTNDSKDNKSNKKSTAGRGAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIH 355
BLAST of Sed0017381 vs. NCBI nr
Match:
XP_022999909.1 (extensin-like [Cucurbita maxima])
HSP 1 Score: 339.0 bits (868), Expect = 5.1e-89
Identity = 228/368 (61.96%), Postives = 260/368 (70.65%), Query Frame = 0
Query: 1 MAGPMPRPWFRLGSFTRPTTTATPAAPATEQPRPVPPRIRPLLIRPAAATEPSQPTTP-Q 60
MAG +PRPWFRLGS TRP TTAT AP T+QPRP PPR+RP LIR + TE ++PTTP Q
Sbjct: 1 MAGQVPRPWFRLGSMTRP-TTATTTAPVTDQPRPAPPRMRPPLIRTTSLTELAEPTTPLQ 60
Query: 61 PPKSPPQPPRPALQTPLVKKEASPPPTVAKTLTKPVLPMLARPVVPSPSNVPKADTAAAK 120
KSPPQ PR A TP KKEASPPP P L RPVV S TAA K
Sbjct: 61 SAKSPPQLPRLAPLTPQPKKEASPPPPP---------PPLTRPVVTS--------TAAPK 120
Query: 121 PSSPKGRSSSVAASPPQTELLDKDSRKNPSPVPSPSIPKSIPAVPSPYQS--PKPKAAAL 180
PSSPKG+S S+ SPP+ DK+S K+P+PVPSPSIPKSIPAVPSPYQS PKPKA A
Sbjct: 121 PSSPKGKSHSLGGSPPRNGSFDKESNKHPTPVPSPSIPKSIPAVPSPYQSPKPKPKATAS 180
Query: 181 PPSPLLLPLPQLQPVAEPTLETIPQEVERKTVVFQKVMEKPSPPDHNHNNKKQEP----- 240
PPSPL+LP PQLQ VAEP ETI QEVERKTVVFQKVMEKPSPPDH+ NN +
Sbjct: 181 PPSPLVLPPPQLQFVAEPRPETILQEVERKTVVFQKVMEKPSPPDHDINNYHSQASGFGK 240
Query: 241 --KKNDIYKEKEKGNGAKK----AEEKDSNPRVITMAGENRGASMEVVLSDKSDSG---- 300
KK+D ++KGNGAKK + +KDS+ RVITMAGENRGASMEVVLSDK+++
Sbjct: 241 NGKKHD--DNQDKGNGAKKPFVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQ 300
Query: 301 ---------SDESKDKEGKKKSMGTRNVHPMKAFCNSNVQGINNSILMNSNFSHHDPGIH 342
+++SKD + KKS + PMKAF NSNVQGINNSILM+S F+HHDPGIH
Sbjct: 301 TNQSDKEDTTNDSKDNKSNKKSTACSSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIH 348
BLAST of Sed0017381 vs. NCBI nr
Match:
KAG7013807.1 (hypothetical protein SDJN02_23974, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 316.2 bits (809), Expect = 3.5e-82
Identity = 215/385 (55.84%), Postives = 254/385 (65.97%), Query Frame = 0
Query: 1 MAGPMPRPWFRLGSFTRPTTTATPAAPATEQPRPVPPRIRPLLIRPAAATEPSQPTTPQP 60
MAG +PRPWFRLGS TRPTT AT + T+QPRPVP RIRP +IR A+ TEP++PTTPQP
Sbjct: 1 MAGQLPRPWFRLGSLTRPTTGATTGS-GTDQPRPVPARIRPPVIRTASFTEPAEPTTPQP 60
Query: 61 PKSPPQPPR-----------PALQTPLVKKEASPPPTVAKTLTKPVLPMLARPVVPSPSN 120
KSPPQ P P TP VKK ASPP + RP +PSP
Sbjct: 61 SKSPPQTPMKKAASPPQLPLPGSLTPPVKKPASPPAAA-----------VTRPALPSP-- 120
Query: 121 VPKADTAAAKPSSPKGRSSSVAASPPQTELLDKDSRKNPSPVPSPSIPKSIPAVPSPYQS 180
AK SPKG+S SV SP + EL++KDS K SPV SP +PKSIPAVP+PYQS
Sbjct: 121 --------AKHISPKGKSGSVVGSPTKNELVNKDSSKQASPVSSPLVPKSIPAVPTPYQS 180
Query: 181 PKPKAAALPPSPLLLPLPQLQPVAEPTLETIPQEVERKTVVFQKVMEKPSPPDHN----- 240
PKPKAAA PPSPL LP PQLQ V EP E+IPQEVERKTVVFQKVM+K S +H+
Sbjct: 181 PKPKAAASPPSPLTLPPPQLQSVDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYH 240
Query: 241 ------HNNKKQEPKKNDIYKEKEKGNGAKKA-------EEKDSNPRVITMAGENRGASM 300
N KQEPKK+D + K+K GAKKA ++ ++N RVITMAG+N GASM
Sbjct: 241 THAAEFGQNGKQEPKKSDEDESKDKAIGAKKALLESSNDKDTNTNTRVITMAGKNNGASM 300
Query: 301 EVVLSDKS-----DSGSDESKDKEGKKKSMGTRNVHPMKAFCNSNVQGINNSILMNSNFS 352
E+ LSDK+ D+ ++ KD + KK++ TRN PMKAF NSNVQGINNSILM+S F+
Sbjct: 301 EIFLSDKNKNKNEDTTNNNLKDNKSTKKTIRTRNGLPMKAFFNSNVQGINNSILMDSKFT 360
BLAST of Sed0017381 vs. NCBI nr
Match:
XP_022958822.1 (pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucurbita moschata])
HSP 1 Score: 316.2 bits (809), Expect = 3.5e-82
Identity = 215/385 (55.84%), Postives = 254/385 (65.97%), Query Frame = 0
Query: 1 MAGPMPRPWFRLGSFTRPTTTATPAAPATEQPRPVPPRIRPLLIRPAAATEPSQPTTPQP 60
MAG +PRPWFRLGS TRPTT AT + T+QPRPVP RIRP +IR A+ TEP++PTTPQP
Sbjct: 1 MAGQLPRPWFRLGSLTRPTTGATTGS-GTDQPRPVPARIRPPVIRTASFTEPAEPTTPQP 60
Query: 61 PKSPPQPPR-----------PALQTPLVKKEASPPPTVAKTLTKPVLPMLARPVVPSPSN 120
KSPPQ P P TP VKK ASPP + RP +PSP
Sbjct: 61 SKSPPQTPMKKAASPPQLPLPGSLTPPVKKPASPPAAA-----------VTRPALPSP-- 120
Query: 121 VPKADTAAAKPSSPKGRSSSVAASPPQTELLDKDSRKNPSPVPSPSIPKSIPAVPSPYQS 180
AK SPKG+S SV SP + EL++KDS K SPV SP +PKSIPAVP+PYQS
Sbjct: 121 --------AKHISPKGKSGSVVGSPTKNELVNKDSSKQASPVSSPLVPKSIPAVPTPYQS 180
Query: 181 PKPKAAALPPSPLLLPLPQLQPVAEPTLETIPQEVERKTVVFQKVMEKPSPPDHN----- 240
PKPKAAA PPSPL LP PQLQ V EP E+IPQEVERKTVVFQKVM+K S +H+
Sbjct: 181 PKPKAAASPPSPLTLPPPQLQSVDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYH 240
Query: 241 ------HNNKKQEPKKNDIYKEKEKGNGAKKA-------EEKDSNPRVITMAGENRGASM 300
N KQEPKK+D + K+K GAKKA ++ ++N RVITMAG+N GASM
Sbjct: 241 THAAEFGQNGKQEPKKSDEDESKDKAIGAKKALLESSNDKDTNTNTRVITMAGKNNGASM 300
Query: 301 EVVLSDKS-----DSGSDESKDKEGKKKSMGTRNVHPMKAFCNSNVQGINNSILMNSNFS 352
E+ LSDK+ D+ ++ KD + KK++ TRN PMKAF NSNVQGINNSILM+S F+
Sbjct: 301 EIFLSDKNKNKNEDTTNNNLKDNKSTKKAIRTRNGLPMKAFFNSNVQGINNSILMDSKFT 360
BLAST of Sed0017381 vs. ExPASy TrEMBL
Match:
A0A6J1HKY3 (extensin-like OS=Cucurbita moschata OX=3662 GN=LOC111464501 PE=4 SV=1)
HSP 1 Score: 347.4 bits (890), Expect = 6.9e-92
Identity = 235/375 (62.67%), Postives = 266/375 (70.93%), Query Frame = 0
Query: 1 MAGPMPRPWFRLGSFTRPTTTATPAAPATEQPRPVPPRIRPLLIRPAAATEPSQPTTP-Q 60
MAG +PRPWFRLGS TRP TTAT AP T+QPRPVPPRIRP LIR ++ TE ++PTTP Q
Sbjct: 1 MAGQVPRPWFRLGSMTRP-TTATTTAPVTDQPRPVPPRIRPPLIRTSSLTELAEPTTPQQ 60
Query: 61 PPKSPPQPPRPALQTPLVKKEASPPPTVAKTLTKPVLPMLARPVVPSPSNVPKADTAAAK 120
KSPPQ PR A TP KKEASPPP P L RPVV S TAA K
Sbjct: 61 SAKSPPQLPRLAPLTPQPKKEASPPPPP---------PPLTRPVVTS--------TAAPK 120
Query: 121 PSSPKGRSSSVAASPPQTELLDKDSRKNPSPVPSPSIPKSIPAVPSPYQS--PKPKAAAL 180
PSSPKG+S S+ SPP+ DK+S K+P+P PSPSIPKSIPAVPSPYQS PKPKA A
Sbjct: 121 PSSPKGKSHSLGGSPPRNGSFDKESNKHPTPAPSPSIPKSIPAVPSPYQSPKPKPKATAS 180
Query: 181 PPSPLLLPLPQLQPVAEPTLETIPQEVERKTVVFQKVMEKPSPPDHNHNNKKQEP----- 240
PPSPL+LP PQLQ VAEP ETIPQEVERKTVVFQKVMEKPSPPDH+ NN +
Sbjct: 181 PPSPLVLPPPQLQFVAEPRPETIPQEVERKTVVFQKVMEKPSPPDHDINNYNSQASGFGK 240
Query: 241 --KKNDIYKEKEKGNGAKK----AEEKDSNPRVITMAGENRGASMEVVLSDK-------- 300
KK+D ++KGNGAKK + +KDS+ RVITMAGENRGASMEVVLSDK
Sbjct: 241 NGKKHD--DNQDKGNGAKKPFVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQ 300
Query: 301 ---SDSG--SDESKDKEGKKKSMGTRNVHPMKAFCNSNVQGINNSILMNSNFSHHDPGIH 349
SD+G +++SKD + KKS R+ PMKAF NSNVQGINNSILM+S F+HHDPGIH
Sbjct: 301 INQSDNGDTTNDSKDNKSNKKSTACRSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIH 355
BLAST of Sed0017381 vs. ExPASy TrEMBL
Match:
A0A6J1KIF7 (extensin-like OS=Cucurbita maxima OX=3661 GN=LOC111494246 PE=4 SV=1)
HSP 1 Score: 339.0 bits (868), Expect = 2.5e-89
Identity = 228/368 (61.96%), Postives = 260/368 (70.65%), Query Frame = 0
Query: 1 MAGPMPRPWFRLGSFTRPTTTATPAAPATEQPRPVPPRIRPLLIRPAAATEPSQPTTP-Q 60
MAG +PRPWFRLGS TRP TTAT AP T+QPRP PPR+RP LIR + TE ++PTTP Q
Sbjct: 1 MAGQVPRPWFRLGSMTRP-TTATTTAPVTDQPRPAPPRMRPPLIRTTSLTELAEPTTPLQ 60
Query: 61 PPKSPPQPPRPALQTPLVKKEASPPPTVAKTLTKPVLPMLARPVVPSPSNVPKADTAAAK 120
KSPPQ PR A TP KKEASPPP P L RPVV S TAA K
Sbjct: 61 SAKSPPQLPRLAPLTPQPKKEASPPPPP---------PPLTRPVVTS--------TAAPK 120
Query: 121 PSSPKGRSSSVAASPPQTELLDKDSRKNPSPVPSPSIPKSIPAVPSPYQS--PKPKAAAL 180
PSSPKG+S S+ SPP+ DK+S K+P+PVPSPSIPKSIPAVPSPYQS PKPKA A
Sbjct: 121 PSSPKGKSHSLGGSPPRNGSFDKESNKHPTPVPSPSIPKSIPAVPSPYQSPKPKPKATAS 180
Query: 181 PPSPLLLPLPQLQPVAEPTLETIPQEVERKTVVFQKVMEKPSPPDHNHNNKKQEP----- 240
PPSPL+LP PQLQ VAEP ETI QEVERKTVVFQKVMEKPSPPDH+ NN +
Sbjct: 181 PPSPLVLPPPQLQFVAEPRPETILQEVERKTVVFQKVMEKPSPPDHDINNYHSQASGFGK 240
Query: 241 --KKNDIYKEKEKGNGAKK----AEEKDSNPRVITMAGENRGASMEVVLSDKSDSG---- 300
KK+D ++KGNGAKK + +KDS+ RVITMAGENRGASMEVVLSDK+++
Sbjct: 241 NGKKHD--DNQDKGNGAKKPFVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQ 300
Query: 301 ---------SDESKDKEGKKKSMGTRNVHPMKAFCNSNVQGINNSILMNSNFSHHDPGIH 342
+++SKD + KKS + PMKAF NSNVQGINNSILM+S F+HHDPGIH
Sbjct: 301 TNQSDKEDTTNDSKDNKSNKKSTACSSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIH 348
BLAST of Sed0017381 vs. ExPASy TrEMBL
Match:
A0A6J1H2W2 (pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459978 PE=4 SV=1)
HSP 1 Score: 316.2 bits (809), Expect = 1.7e-82
Identity = 215/385 (55.84%), Postives = 254/385 (65.97%), Query Frame = 0
Query: 1 MAGPMPRPWFRLGSFTRPTTTATPAAPATEQPRPVPPRIRPLLIRPAAATEPSQPTTPQP 60
MAG +PRPWFRLGS TRPTT AT + T+QPRPVP RIRP +IR A+ TEP++PTTPQP
Sbjct: 1 MAGQLPRPWFRLGSLTRPTTGATTGS-GTDQPRPVPARIRPPVIRTASFTEPAEPTTPQP 60
Query: 61 PKSPPQPPR-----------PALQTPLVKKEASPPPTVAKTLTKPVLPMLARPVVPSPSN 120
KSPPQ P P TP VKK ASPP + RP +PSP
Sbjct: 61 SKSPPQTPMKKAASPPQLPLPGSLTPPVKKPASPPAAA-----------VTRPALPSP-- 120
Query: 121 VPKADTAAAKPSSPKGRSSSVAASPPQTELLDKDSRKNPSPVPSPSIPKSIPAVPSPYQS 180
AK SPKG+S SV SP + EL++KDS K SPV SP +PKSIPAVP+PYQS
Sbjct: 121 --------AKHISPKGKSGSVVGSPTKNELVNKDSSKQASPVSSPLVPKSIPAVPTPYQS 180
Query: 181 PKPKAAALPPSPLLLPLPQLQPVAEPTLETIPQEVERKTVVFQKVMEKPSPPDHN----- 240
PKPKAAA PPSPL LP PQLQ V EP E+IPQEVERKTVVFQKVM+K S +H+
Sbjct: 181 PKPKAAASPPSPLTLPPPQLQSVDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYH 240
Query: 241 ------HNNKKQEPKKNDIYKEKEKGNGAKKA-------EEKDSNPRVITMAGENRGASM 300
N KQEPKK+D + K+K GAKKA ++ ++N RVITMAG+N GASM
Sbjct: 241 THAAEFGQNGKQEPKKSDEDESKDKAIGAKKALLESSNDKDTNTNTRVITMAGKNNGASM 300
Query: 301 EVVLSDKS-----DSGSDESKDKEGKKKSMGTRNVHPMKAFCNSNVQGINNSILMNSNFS 352
E+ LSDK+ D+ ++ KD + KK++ TRN PMKAF NSNVQGINNSILM+S F+
Sbjct: 301 EIFLSDKNKNKNEDTTNNNLKDNKSTKKAIRTRNGLPMKAFFNSNVQGINNSILMDSKFT 360
BLAST of Sed0017381 vs. ExPASy TrEMBL
Match:
A0A6J1KY68 (serine/arginine repetitive matrix protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499277 PE=4 SV=1)
HSP 1 Score: 304.7 bits (779), Expect = 5.1e-79
Identity = 210/385 (54.55%), Postives = 249/385 (64.68%), Query Frame = 0
Query: 1 MAGPMPRPWFRLGSFTRPTTTATPAAPATEQPRPVPPRIRPLLIRPAAATEPSQPTTPQP 60
MA +PRPWFRLGS TRPTT AT P T+QPRPVP RIRP +IR A+ TEP++PTTPQ
Sbjct: 1 MAAQLPRPWFRLGSLTRPTTGAT-TGPGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQQ 60
Query: 61 PKSPPQPPR-----------PALQTPLVKKEASPPPTVAKTLTKPVLPMLARPVVPSPSN 120
KSPPQ P P TP VKK ASPP A +T P LP
Sbjct: 61 SKSPPQTPMKKAASPPQLPLPGSLTPPVKKAASPP---AAAVTIPALP------------ 120
Query: 121 VPKADTAAAKPSSPKGRSSSVAASPPQTELLDKDSRKNPSPVPSPSIPKSIPAVPSPYQS 180
+ AK SPKG+S SV SP + EL++KDSRK SPV SP +PKSIPAVP+PYQS
Sbjct: 121 ------SPAKHISPKGKSGSVVGSPTKNELVNKDSRKQASPVSSPLVPKSIPAVPTPYQS 180
Query: 181 PKPKAAALPPSPLLLPLPQLQPVAEPTLETIPQEVERKTVVFQKVMEKPSPPDHN----- 240
PKPK AA PPSPL LP PQLQ V EP ETIPQ VERKTVVFQKV++K S +H+
Sbjct: 181 PKPKTAASPPSPLTLPPPQLQSVDEPKHETIPQAVERKTVVFQKVIDKASQAEHDIASYH 240
Query: 241 ------HNNKKQEPKKNDIYKEKEKGNGAKKA-------EEKDSNPRVITMAGENRGASM 300
N KQEPKK+D + K+K GA KA ++ ++N +VITMAG+N GA M
Sbjct: 241 TRAAEFGQNGKQEPKKSDEDESKDKAIGATKALLESSNDKDTNTNTKVITMAGKNNGAFM 300
Query: 301 EVVLSDKS-----DSGSDESKDKEGKKKSMGTRNVHPMKAFCNSNVQGINNSILMNSNFS 352
E+ LSDK+ D+ ++ KD + KK++ TRN PMKAF NSNVQGINNSILM+S F+
Sbjct: 301 EIFLSDKNKNKNEDTTNNNLKDNKSTKKTIRTRNGVPMKAFFNSNVQGINNSILMDSKFT 360
BLAST of Sed0017381 vs. ExPASy TrEMBL
Match:
A0A6J1H458 (pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111459978 PE=4 SV=1)
HSP 1 Score: 300.1 bits (767), Expect = 1.3e-77
Identity = 208/374 (55.61%), Postives = 251/374 (67.11%), Query Frame = 0
Query: 1 MAGPMPRPWFRLGSFTRPTTTATPAAPATEQPRPVPPRIRPLLIRPAAATEPSQPTTPQP 60
MAG +PRPWFRLGS TRPTT AT + T+QPRPVP RIRP +IR A+ TEP++PTTPQP
Sbjct: 1 MAGQLPRPWFRLGSLTRPTTGATTGS-GTDQPRPVPARIRPPVIRTASFTEPAEPTTPQP 60
Query: 61 PKSPPQPPRPALQTPLVKKEASPPPTVAKTLTKPVLPMLARPVVPSPSNVPKADTAAAKP 120
KSPPQ P +KK ASPP + LP P V P++ P A A +P
Sbjct: 61 SKSPPQTP--------MKKAASPP--------QLPLPGSLTPPVKKPASPPAA--AVTRP 120
Query: 121 SSPKGRSSSVAASPPQTELLDKDSRKNPSPVPSPSIPKSIPAVPSPYQSPKPKAAALPPS 180
+ P S + SP + EL++KDS K SPV SP +PKSIPAVP+PYQSPKPKAAA PPS
Sbjct: 121 ALP---SPAKHISPTKNELVNKDSSKQASPVSSPLVPKSIPAVPTPYQSPKPKAAASPPS 180
Query: 181 PLLLPLPQLQPVAEPTLETIPQEVERKTVVFQKVMEKPSPPDHN-----------HNNKK 240
PL LP PQLQ V EP E+IPQEVERKTVVFQKVM+K S +H+ N K
Sbjct: 181 PLTLPPPQLQSVDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYHTHAAEFGQNGK 240
Query: 241 QEPKKNDIYKEKEKGNGAKKA-------EEKDSNPRVITMAGENRGASMEVVLSDKS--- 300
QEPKK+D + K+K GAKKA ++ ++N RVITMAG+N GASME+ LSDK+
Sbjct: 241 QEPKKSDEDESKDKAIGAKKALLESSNDKDTNTNTRVITMAGKNNGASMEIFLSDKNKNK 300
Query: 301 --DSGSDESKDKEGKKKSMGTRNVHPMKAFCNSNVQGINNSILMNSNFSHHDPGIHLVFS 352
D+ ++ KD + KK++ TRN PMKAF NSNVQGINNSILM+S F+HHDPGIHL+FS
Sbjct: 301 NEDTTNNNLKDNKSTKKAIRTRNGLPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLLFS 352
BLAST of Sed0017381 vs. TAIR 10
Match:
AT2G46630.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 110095 Blast hits to 59224 proteins in 2216 species: Archae - 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843; Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876 (source: NCBI BLink). )
HSP 1 Score: 84.3 bits (207), Expect = 2.1e-16
Identity = 131/397 (33.00%), Postives = 172/397 (43.32%), Query Frame = 0
Query: 7 RPWFRLGSFTRPTTTATPAAPATEQPRPVPPRIRPLLIRPAAATEPS-----QPTTPQPP 66
RPWFRL S RPT + P P+P P L++RP A +PS QP +P
Sbjct: 5 RPWFRLSSIARPTAQGSSDPP---PPQPRPTSRSSLVVRP-PAKQPSPPRQRQPRSPPRQ 64
Query: 67 KSPPQPPRPALQTPLVKKEASPPPTVAKTLTKPVLPMLARPVVPSPSNVPKADTAAAKPS 126
+ PP PPR Q PL PPT P +R + SP PK AA P
Sbjct: 65 QDPPSPPRQQ-QQPLTPPRQKAPPTSPPQERSPYHSPPSRHM--SPPTPPK----AATPP 124
Query: 127 SPKGRSSSVAASPPQTELLDKDSRKNPSPVPSP-----SIPKSIPAVPSPYQSPKPKAAA 186
P RSS + P+ E+ + + P+ PSP S SP +S + A
Sbjct: 125 PPPPRSSYTSPPSPK-EVQEALPPRKPNSPPSPAHSSRSTTSESVKTRSPSESENHRKAP 184
Query: 187 LPP--SPLLLPLPQLQPVAEPTLETIPQEVERKTVVFQKVMEKPSPPDHNHN-----NKK 246
P SP LP L E T ++ + +K + HN N N+
Sbjct: 185 SPRVLSPYSLPASLLHSERETT--------QKNILTAEKTSQTHETNHHNQNHNHDYNQN 244
Query: 247 QEPKKNDIYKEKE--KGNGAKKAEEKDS--------NPRVITMAGENRGASMEVVLSDKS 306
+N Y + + +GN KK + S + RVIT+AGEN+GA ME++ S +
Sbjct: 245 HNYNQNHSYNQNQNHQGNNPKKMHRQPSSSDSENIMSTRVITIAGENKGAVMEILRSPQG 304
Query: 307 D-------------------------SGSDESKDKEGKKKSMGTRNVH-------PMKAF 345
+ S S S + EGKKK+ T+NV PMKAF
Sbjct: 305 NKTGGSGTHSSRVSHGTGEKGRRLQSSSSSSSDEGEGKKKT--TKNVPNKGNSNLPMKAF 364
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022964490.1 | 1.4e-91 | 62.67 | extensin-like [Cucurbita moschata] >KAG6593605.1 hypothetical protein SDJN03_130... | [more] |
XP_023513718.1 | 6.0e-90 | 61.33 | proline-rich receptor-like protein kinase PERK8 [Cucurbita pepo subsp. pepo] | [more] |
XP_022999909.1 | 5.1e-89 | 61.96 | extensin-like [Cucurbita maxima] | [more] |
KAG7013807.1 | 3.5e-82 | 55.84 | hypothetical protein SDJN02_23974, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022958822.1 | 3.5e-82 | 55.84 | pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucurbit... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1HKY3 | 6.9e-92 | 62.67 | extensin-like OS=Cucurbita moschata OX=3662 GN=LOC111464501 PE=4 SV=1 | [more] |
A0A6J1KIF7 | 2.5e-89 | 61.96 | extensin-like OS=Cucurbita maxima OX=3661 GN=LOC111494246 PE=4 SV=1 | [more] |
A0A6J1H2W2 | 1.7e-82 | 55.84 | pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 OS=Cucurb... | [more] |
A0A6J1KY68 | 5.1e-79 | 54.55 | serine/arginine repetitive matrix protein 1 isoform X1 OS=Cucurbita maxima OX=36... | [more] |
A0A6J1H458 | 1.3e-77 | 55.61 | pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2 OS=Cucurb... | [more] |
Match Name | E-value | Identity | Description | |
AT2G46630.1 | 2.1e-16 | 33.00 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXP... | [more] |