Sed0017381 (gene) Chayote v1

Overview
NameSed0017381
Typegene
OrganismSechium edule (Chayote v1)
Descriptionpollen-specific leucine-rich repeat extensin-like protein 1 isoform X1
LocationLG09: 7484657 .. 7486663 (+)
RNA-Seq ExpressionSed0017381
SyntenySed0017381
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTTGTGATTGTGTATTAGTTAATGGCTGGTCCAATGCCACGTCCATGGTTCCGTTTAGGTTCTTTTACTCGACCAACAACAACAGCCACGCCCGCTGCTCCTGCGACCGAACAACCGCGCCCGGTTCCTCCCCGAATCCGACCTCTCTTGATCCGACCCGCCGCTGCAACGGAGCCATCACAACCCACTACCCCACAGCCTCCCAAATCCCCACCGCAGCCGCCTCGCCCAGCCCTGCAAACCCCACTGGTAAAAAAAGAAGCATCGCCACCGCCGACTGTCGCCAAAACATTGACCAAACCTGTTTTGCCAATGCTCGCAAGGCCTGTCGTTCCGTCGCCGTCGAATGTACCGAAAGCTGACACTGCCGCGGCAAAACCCAGTAGCCCGAAGGGGCGAAGTTCTTCAGTTGCTGCATCTCCGCCCCAAACTGAGTTGCTTGATAAAGATAGCAGAAAAAACCCTAGCCCGGTTCCATCTCCTTCGATTCCAAAGTCTATTCCAGCGGTTCCGTCGCCTTACCAGTCGCCAAAGCCGAAGGCTGCAGCTTTGCCACCGTCGCCGCTGCTGTTGCCGCTGCCGCAATTGCAGCCCGTTGCTGAACCTACGCTTGAGACCATTCCGCAAGAGGTAATGTAGTGTTAATTTTACTTTATTTATTCCAAGGTGGTTTTTTTTTAAATGAAATTGGAAGGCATTTTAAATAATAGTTAAAAATAAAAATAGAGAAATCATGAGTGAGAATTGTGTTTATAGTTTTAGAATTTAAAAAAAAAAAGAATTTTAGAACAATATCAAGCAATGTCATGTTTGTATACATAATAGAAATCATTTAGCCGGCATCAATGTATTCCTATAATTCAGAAGAGACAGGTTCGAGTCTCTCTTCCCTAAGTTATAAATATGAAGAATAATTCAGACGAGGTATAGACAATCTTCACATTCATATGAACTTGTTATTTACTTTCATTTACTTTTATTTCTATCCAAACATATATCTTATAGTCCAGTCGCATGTGATATAGCTAGACAACAAAGTCGTAGCAAAGATTATATTCTAACTTGTGCTCACGAGAAAAATACCTAAACAATTCTTGCAGATTGGAATACATATTTTCAAAGTTTAAGTACCAAAATACTCTTTAAAGGACAAAAGAAATAATTACACAAGACTCTAGATACTTGAGAAAAAATACATATTTTACCCTTAAAACATGGTAATCAAATATAACTAAAAGAGCAGACAAATTTTAAAATTGTTCCAAATTGAAATAATTAGAAAAACAAGACAGTCAAAAAGTTAAAATAATCAACAATATTCTCCACAGGTTGAAAGGAAAACAGTGGTTTTCCAAAAGGTGATGGAGAAGCCTTCCCCACCTGATCATAATCACAATAACAAGAAGCAAGAACCGAAGAAAAATGATATCTATAAAGAAAAAGAGAAAGGAAATGGAGCTAAAAAAGCCGAGGAGAAAGATTCAAACCCGAGAGTCATAACAATGGCGGGCGAAAATAGAGGAGCTTCCATGGAAGTAGTACTCTCAGACAAAAGCGACAGCGGCAGCGACGAAAGCAAAGACAAGGAAGGTAAAAAGAAATCGATGGGGACTCGAAATGTACACCCAATGAAAGCTTTCTGTAACAGCAATGTTCAAGGGATTAACAATTCCATTCTCATGAACTCCAATTTCTCCCACCATGATCCTGGCATTCACCTCGTTTTTTCGAGGATGCCACCAGTCGATGACGAAGACAAAGACAAAGACAAAGACAAGGAAAAACAATGAAAGTTGTGTTCTTATCTCTGATTTGAGTCTCTATGTTTATTATTATCATATATCTATCTTAATTTTTTTTTTTTTTTAGTTTGATAAATATGTTGTTTGTTTGAGAGAATAAGAAAATGAGAGTTAACTCGTAATAGAGACTGAAAAAAGATTCTGGCTTGTTAATGTTTACTTTAATGCATATAATAAAATGGGCTGACTTTTCTGTTTTAAAA

mRNA sequence

ATTTTGTGATTGTGTATTAGTTAATGGCTGGTCCAATGCCACGTCCATGGTTCCGTTTAGGTTCTTTTACTCGACCAACAACAACAGCCACGCCCGCTGCTCCTGCGACCGAACAACCGCGCCCGGTTCCTCCCCGAATCCGACCTCTCTTGATCCGACCCGCCGCTGCAACGGAGCCATCACAACCCACTACCCCACAGCCTCCCAAATCCCCACCGCAGCCGCCTCGCCCAGCCCTGCAAACCCCACTGGTAAAAAAAGAAGCATCGCCACCGCCGACTGTCGCCAAAACATTGACCAAACCTGTTTTGCCAATGCTCGCAAGGCCTGTCGTTCCGTCGCCGTCGAATGTACCGAAAGCTGACACTGCCGCGGCAAAACCCAGTAGCCCGAAGGGGCGAAGTTCTTCAGTTGCTGCATCTCCGCCCCAAACTGAGTTGCTTGATAAAGATAGCAGAAAAAACCCTAGCCCGGTTCCATCTCCTTCGATTCCAAAGTCTATTCCAGCGGTTCCGTCGCCTTACCAGTCGCCAAAGCCGAAGGCTGCAGCTTTGCCACCGTCGCCGCTGCTGTTGCCGCTGCCGCAATTGCAGCCCGTTGCTGAACCTACGCTTGAGACCATTCCGCAAGAGGTTGAAAGGAAAACAGTGGTTTTCCAAAAGGTGATGGAGAAGCCTTCCCCACCTGATCATAATCACAATAACAAGAAGCAAGAACCGAAGAAAAATGATATCTATAAAGAAAAAGAGAAAGGAAATGGAGCTAAAAAAGCCGAGGAGAAAGATTCAAACCCGAGAGTCATAACAATGGCGGGCGAAAATAGAGGAGCTTCCATGGAAGTAGTACTCTCAGACAAAAGCGACAGCGGCAGCGACGAAAGCAAAGACAAGGAAGGTAAAAAGAAATCGATGGGGACTCGAAATGTACACCCAATGAAAGCTTTCTGTAACAGCAATGTTCAAGGGATTAACAATTCCATTCTCATGAACTCCAATTTCTCCCACCATGATCCTGGCATTCACCTCGTTTTTTCGAGGATGCCACCAGTCGATGACGAAGACAAAGACAAAGACAAAGACAAGGAAAAACAATGAAAGTTGTGTTCTTATCTCTGATTTGAGTCTCTATGTTTATTATTATCATATATCTATCTTAATTTTTTTTTTTTTTTAGTTTGATAAATATGTTGTTTGTTTGAGAGAATAAGAAAATGAGAGTTAACTCGTAATAGAGACTGAAAAAAGATTCTGGCTTGTTAATGTTTACTTTAATGCATATAATAAAATGGGCTGACTTTTCTGTTTTAAAA

Coding sequence (CDS)

ATGGCTGGTCCAATGCCACGTCCATGGTTCCGTTTAGGTTCTTTTACTCGACCAACAACAACAGCCACGCCCGCTGCTCCTGCGACCGAACAACCGCGCCCGGTTCCTCCCCGAATCCGACCTCTCTTGATCCGACCCGCCGCTGCAACGGAGCCATCACAACCCACTACCCCACAGCCTCCCAAATCCCCACCGCAGCCGCCTCGCCCAGCCCTGCAAACCCCACTGGTAAAAAAAGAAGCATCGCCACCGCCGACTGTCGCCAAAACATTGACCAAACCTGTTTTGCCAATGCTCGCAAGGCCTGTCGTTCCGTCGCCGTCGAATGTACCGAAAGCTGACACTGCCGCGGCAAAACCCAGTAGCCCGAAGGGGCGAAGTTCTTCAGTTGCTGCATCTCCGCCCCAAACTGAGTTGCTTGATAAAGATAGCAGAAAAAACCCTAGCCCGGTTCCATCTCCTTCGATTCCAAAGTCTATTCCAGCGGTTCCGTCGCCTTACCAGTCGCCAAAGCCGAAGGCTGCAGCTTTGCCACCGTCGCCGCTGCTGTTGCCGCTGCCGCAATTGCAGCCCGTTGCTGAACCTACGCTTGAGACCATTCCGCAAGAGGTTGAAAGGAAAACAGTGGTTTTCCAAAAGGTGATGGAGAAGCCTTCCCCACCTGATCATAATCACAATAACAAGAAGCAAGAACCGAAGAAAAATGATATCTATAAAGAAAAAGAGAAAGGAAATGGAGCTAAAAAAGCCGAGGAGAAAGATTCAAACCCGAGAGTCATAACAATGGCGGGCGAAAATAGAGGAGCTTCCATGGAAGTAGTACTCTCAGACAAAAGCGACAGCGGCAGCGACGAAAGCAAAGACAAGGAAGGTAAAAAGAAATCGATGGGGACTCGAAATGTACACCCAATGAAAGCTTTCTGTAACAGCAATGTTCAAGGGATTAACAATTCCATTCTCATGAACTCCAATTTCTCCCACCATGATCCTGGCATTCACCTCGTTTTTTCGAGGATGCCACCAGTCGATGACGAAGACAAAGACAAAGACAAAGACAAGGAAAAACAATGA

Protein sequence

MAGPMPRPWFRLGSFTRPTTTATPAAPATEQPRPVPPRIRPLLIRPAAATEPSQPTTPQPPKSPPQPPRPALQTPLVKKEASPPPTVAKTLTKPVLPMLARPVVPSPSNVPKADTAAAKPSSPKGRSSSVAASPPQTELLDKDSRKNPSPVPSPSIPKSIPAVPSPYQSPKPKAAALPPSPLLLPLPQLQPVAEPTLETIPQEVERKTVVFQKVMEKPSPPDHNHNNKKQEPKKNDIYKEKEKGNGAKKAEEKDSNPRVITMAGENRGASMEVVLSDKSDSGSDESKDKEGKKKSMGTRNVHPMKAFCNSNVQGINNSILMNSNFSHHDPGIHLVFSRMPPVDDEDKDKDKDKEKQ
Homology
BLAST of Sed0017381 vs. NCBI nr
Match: XP_022964490.1 (extensin-like [Cucurbita moschata] >KAG6593605.1 hypothetical protein SDJN03_13081, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025952.1 hypothetical protein SDJN02_12450, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 347.4 bits (890), Expect = 1.4e-91
Identity = 235/375 (62.67%), Postives = 266/375 (70.93%), Query Frame = 0

Query: 1   MAGPMPRPWFRLGSFTRPTTTATPAAPATEQPRPVPPRIRPLLIRPAAATEPSQPTTP-Q 60
           MAG +PRPWFRLGS TRP TTAT  AP T+QPRPVPPRIRP LIR ++ TE ++PTTP Q
Sbjct: 1   MAGQVPRPWFRLGSMTRP-TTATTTAPVTDQPRPVPPRIRPPLIRTSSLTELAEPTTPQQ 60

Query: 61  PPKSPPQPPRPALQTPLVKKEASPPPTVAKTLTKPVLPMLARPVVPSPSNVPKADTAAAK 120
             KSPPQ PR A  TP  KKEASPPP           P L RPVV S        TAA K
Sbjct: 61  SAKSPPQLPRLAPLTPQPKKEASPPPPP---------PPLTRPVVTS--------TAAPK 120

Query: 121 PSSPKGRSSSVAASPPQTELLDKDSRKNPSPVPSPSIPKSIPAVPSPYQS--PKPKAAAL 180
           PSSPKG+S S+  SPP+    DK+S K+P+P PSPSIPKSIPAVPSPYQS  PKPKA A 
Sbjct: 121 PSSPKGKSHSLGGSPPRNGSFDKESNKHPTPAPSPSIPKSIPAVPSPYQSPKPKPKATAS 180

Query: 181 PPSPLLLPLPQLQPVAEPTLETIPQEVERKTVVFQKVMEKPSPPDHNHNNKKQEP----- 240
           PPSPL+LP PQLQ VAEP  ETIPQEVERKTVVFQKVMEKPSPPDH+ NN   +      
Sbjct: 181 PPSPLVLPPPQLQFVAEPRPETIPQEVERKTVVFQKVMEKPSPPDHDINNYNSQASGFGK 240

Query: 241 --KKNDIYKEKEKGNGAKK----AEEKDSNPRVITMAGENRGASMEVVLSDK-------- 300
             KK+D    ++KGNGAKK    + +KDS+ RVITMAGENRGASMEVVLSDK        
Sbjct: 241 NGKKHD--DNQDKGNGAKKPFVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQ 300

Query: 301 ---SDSG--SDESKDKEGKKKSMGTRNVHPMKAFCNSNVQGINNSILMNSNFSHHDPGIH 349
              SD+G  +++SKD +  KKS   R+  PMKAF NSNVQGINNSILM+S F+HHDPGIH
Sbjct: 301 INQSDNGDTTNDSKDNKSNKKSTACRSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIH 355

BLAST of Sed0017381 vs. NCBI nr
Match: XP_023513718.1 (proline-rich receptor-like protein kinase PERK8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 342.0 bits (876), Expect = 6.0e-90
Identity = 230/375 (61.33%), Postives = 262/375 (69.87%), Query Frame = 0

Query: 1   MAGPMPRPWFRLGSFTRPTTTATPAAPATEQPRPVPPRIRPLLIRPAAATEPSQPTTP-Q 60
           MAG +PRPWFRLGS TRP TTAT  AP T+QPRP PPR+RP LIR  + TE ++PTTP Q
Sbjct: 1   MAGQVPRPWFRLGSMTRP-TTATTTAPPTDQPRPAPPRMRPPLIRTTSLTELAEPTTPQQ 60

Query: 61  PPKSPPQPPRPALQTPLVKKEASPPPTVAKTLTKPVLPMLARPVVPSPSNVPKADTAAAK 120
             KSPPQ PR A  TP  KKEASPPP           P L RPVV S        TAA K
Sbjct: 61  SAKSPPQLPRLAPLTPQPKKEASPPPPP---------PPLTRPVVTS--------TAAPK 120

Query: 121 PSSPKGRSSSVAASPPQTELLDKDSRKNPSPVPSPSIPKSIPAVPSPYQS--PKPKAAAL 180
           PSSPKG+S S+  SPP+    DK+S K+P+P PSPSIPKSIPAVPSPYQS  PKPKA A 
Sbjct: 121 PSSPKGKSHSLGGSPPRNGSFDKESNKHPTPAPSPSIPKSIPAVPSPYQSPKPKPKATAS 180

Query: 181 PPSPLLLPLPQLQPVAEPTLETIPQEVERKTVVFQKVMEKPSPPDHNHNNKKQEP----- 240
           PPSPL+LP PQLQ VAEP  ETIPQEVERKTVVFQKVMEKPSPPDH+ NN   +      
Sbjct: 181 PPSPLVLPPPQLQFVAEPRPETIPQEVERKTVVFQKVMEKPSPPDHDINNYNSQASGFGK 240

Query: 241 --KKNDIYKEKEKGNGAKK----AEEKDSNPRVITMAGENRGASMEVVLSDKSDSG---- 300
             KK+D    ++KGNGAKK    + +KDS+ RVITMAGENRGASMEVVLSDK+++     
Sbjct: 241 NGKKHD--DNQDKGNGAKKPFVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQ 300

Query: 301 ---------SDESKDKEGKKKSMGTRNVHPMKAFCNSNVQGINNSILMNSNFSHHDPGIH 349
                    +++SKD +  KKS   R   PMKAF NSNVQGINNSILM+S F+HHDPGIH
Sbjct: 301 TNQSDKEETTNDSKDNKSNKKSTAGRGAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIH 355

BLAST of Sed0017381 vs. NCBI nr
Match: XP_022999909.1 (extensin-like [Cucurbita maxima])

HSP 1 Score: 339.0 bits (868), Expect = 5.1e-89
Identity = 228/368 (61.96%), Postives = 260/368 (70.65%), Query Frame = 0

Query: 1   MAGPMPRPWFRLGSFTRPTTTATPAAPATEQPRPVPPRIRPLLIRPAAATEPSQPTTP-Q 60
           MAG +PRPWFRLGS TRP TTAT  AP T+QPRP PPR+RP LIR  + TE ++PTTP Q
Sbjct: 1   MAGQVPRPWFRLGSMTRP-TTATTTAPVTDQPRPAPPRMRPPLIRTTSLTELAEPTTPLQ 60

Query: 61  PPKSPPQPPRPALQTPLVKKEASPPPTVAKTLTKPVLPMLARPVVPSPSNVPKADTAAAK 120
             KSPPQ PR A  TP  KKEASPPP           P L RPVV S        TAA K
Sbjct: 61  SAKSPPQLPRLAPLTPQPKKEASPPPPP---------PPLTRPVVTS--------TAAPK 120

Query: 121 PSSPKGRSSSVAASPPQTELLDKDSRKNPSPVPSPSIPKSIPAVPSPYQS--PKPKAAAL 180
           PSSPKG+S S+  SPP+    DK+S K+P+PVPSPSIPKSIPAVPSPYQS  PKPKA A 
Sbjct: 121 PSSPKGKSHSLGGSPPRNGSFDKESNKHPTPVPSPSIPKSIPAVPSPYQSPKPKPKATAS 180

Query: 181 PPSPLLLPLPQLQPVAEPTLETIPQEVERKTVVFQKVMEKPSPPDHNHNNKKQEP----- 240
           PPSPL+LP PQLQ VAEP  ETI QEVERKTVVFQKVMEKPSPPDH+ NN   +      
Sbjct: 181 PPSPLVLPPPQLQFVAEPRPETILQEVERKTVVFQKVMEKPSPPDHDINNYHSQASGFGK 240

Query: 241 --KKNDIYKEKEKGNGAKK----AEEKDSNPRVITMAGENRGASMEVVLSDKSDSG---- 300
             KK+D    ++KGNGAKK    + +KDS+ RVITMAGENRGASMEVVLSDK+++     
Sbjct: 241 NGKKHD--DNQDKGNGAKKPFVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQ 300

Query: 301 ---------SDESKDKEGKKKSMGTRNVHPMKAFCNSNVQGINNSILMNSNFSHHDPGIH 342
                    +++SKD +  KKS    +  PMKAF NSNVQGINNSILM+S F+HHDPGIH
Sbjct: 301 TNQSDKEDTTNDSKDNKSNKKSTACSSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIH 348

BLAST of Sed0017381 vs. NCBI nr
Match: KAG7013807.1 (hypothetical protein SDJN02_23974, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 316.2 bits (809), Expect = 3.5e-82
Identity = 215/385 (55.84%), Postives = 254/385 (65.97%), Query Frame = 0

Query: 1   MAGPMPRPWFRLGSFTRPTTTATPAAPATEQPRPVPPRIRPLLIRPAAATEPSQPTTPQP 60
           MAG +PRPWFRLGS TRPTT AT  +  T+QPRPVP RIRP +IR A+ TEP++PTTPQP
Sbjct: 1   MAGQLPRPWFRLGSLTRPTTGATTGS-GTDQPRPVPARIRPPVIRTASFTEPAEPTTPQP 60

Query: 61  PKSPPQPPR-----------PALQTPLVKKEASPPPTVAKTLTKPVLPMLARPVVPSPSN 120
            KSPPQ P            P   TP VKK ASPP              + RP +PSP  
Sbjct: 61  SKSPPQTPMKKAASPPQLPLPGSLTPPVKKPASPPAAA-----------VTRPALPSP-- 120

Query: 121 VPKADTAAAKPSSPKGRSSSVAASPPQTELLDKDSRKNPSPVPSPSIPKSIPAVPSPYQS 180
                   AK  SPKG+S SV  SP + EL++KDS K  SPV SP +PKSIPAVP+PYQS
Sbjct: 121 --------AKHISPKGKSGSVVGSPTKNELVNKDSSKQASPVSSPLVPKSIPAVPTPYQS 180

Query: 181 PKPKAAALPPSPLLLPLPQLQPVAEPTLETIPQEVERKTVVFQKVMEKPSPPDHN----- 240
           PKPKAAA PPSPL LP PQLQ V EP  E+IPQEVERKTVVFQKVM+K S  +H+     
Sbjct: 181 PKPKAAASPPSPLTLPPPQLQSVDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYH 240

Query: 241 ------HNNKKQEPKKNDIYKEKEKGNGAKKA-------EEKDSNPRVITMAGENRGASM 300
                   N KQEPKK+D  + K+K  GAKKA       ++ ++N RVITMAG+N GASM
Sbjct: 241 THAAEFGQNGKQEPKKSDEDESKDKAIGAKKALLESSNDKDTNTNTRVITMAGKNNGASM 300

Query: 301 EVVLSDKS-----DSGSDESKDKEGKKKSMGTRNVHPMKAFCNSNVQGINNSILMNSNFS 352
           E+ LSDK+     D+ ++  KD +  KK++ TRN  PMKAF NSNVQGINNSILM+S F+
Sbjct: 301 EIFLSDKNKNKNEDTTNNNLKDNKSTKKTIRTRNGLPMKAFFNSNVQGINNSILMDSKFT 360

BLAST of Sed0017381 vs. NCBI nr
Match: XP_022958822.1 (pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 316.2 bits (809), Expect = 3.5e-82
Identity = 215/385 (55.84%), Postives = 254/385 (65.97%), Query Frame = 0

Query: 1   MAGPMPRPWFRLGSFTRPTTTATPAAPATEQPRPVPPRIRPLLIRPAAATEPSQPTTPQP 60
           MAG +PRPWFRLGS TRPTT AT  +  T+QPRPVP RIRP +IR A+ TEP++PTTPQP
Sbjct: 1   MAGQLPRPWFRLGSLTRPTTGATTGS-GTDQPRPVPARIRPPVIRTASFTEPAEPTTPQP 60

Query: 61  PKSPPQPPR-----------PALQTPLVKKEASPPPTVAKTLTKPVLPMLARPVVPSPSN 120
            KSPPQ P            P   TP VKK ASPP              + RP +PSP  
Sbjct: 61  SKSPPQTPMKKAASPPQLPLPGSLTPPVKKPASPPAAA-----------VTRPALPSP-- 120

Query: 121 VPKADTAAAKPSSPKGRSSSVAASPPQTELLDKDSRKNPSPVPSPSIPKSIPAVPSPYQS 180
                   AK  SPKG+S SV  SP + EL++KDS K  SPV SP +PKSIPAVP+PYQS
Sbjct: 121 --------AKHISPKGKSGSVVGSPTKNELVNKDSSKQASPVSSPLVPKSIPAVPTPYQS 180

Query: 181 PKPKAAALPPSPLLLPLPQLQPVAEPTLETIPQEVERKTVVFQKVMEKPSPPDHN----- 240
           PKPKAAA PPSPL LP PQLQ V EP  E+IPQEVERKTVVFQKVM+K S  +H+     
Sbjct: 181 PKPKAAASPPSPLTLPPPQLQSVDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYH 240

Query: 241 ------HNNKKQEPKKNDIYKEKEKGNGAKKA-------EEKDSNPRVITMAGENRGASM 300
                   N KQEPKK+D  + K+K  GAKKA       ++ ++N RVITMAG+N GASM
Sbjct: 241 THAAEFGQNGKQEPKKSDEDESKDKAIGAKKALLESSNDKDTNTNTRVITMAGKNNGASM 300

Query: 301 EVVLSDKS-----DSGSDESKDKEGKKKSMGTRNVHPMKAFCNSNVQGINNSILMNSNFS 352
           E+ LSDK+     D+ ++  KD +  KK++ TRN  PMKAF NSNVQGINNSILM+S F+
Sbjct: 301 EIFLSDKNKNKNEDTTNNNLKDNKSTKKAIRTRNGLPMKAFFNSNVQGINNSILMDSKFT 360

BLAST of Sed0017381 vs. ExPASy TrEMBL
Match: A0A6J1HKY3 (extensin-like OS=Cucurbita moschata OX=3662 GN=LOC111464501 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 6.9e-92
Identity = 235/375 (62.67%), Postives = 266/375 (70.93%), Query Frame = 0

Query: 1   MAGPMPRPWFRLGSFTRPTTTATPAAPATEQPRPVPPRIRPLLIRPAAATEPSQPTTP-Q 60
           MAG +PRPWFRLGS TRP TTAT  AP T+QPRPVPPRIRP LIR ++ TE ++PTTP Q
Sbjct: 1   MAGQVPRPWFRLGSMTRP-TTATTTAPVTDQPRPVPPRIRPPLIRTSSLTELAEPTTPQQ 60

Query: 61  PPKSPPQPPRPALQTPLVKKEASPPPTVAKTLTKPVLPMLARPVVPSPSNVPKADTAAAK 120
             KSPPQ PR A  TP  KKEASPPP           P L RPVV S        TAA K
Sbjct: 61  SAKSPPQLPRLAPLTPQPKKEASPPPPP---------PPLTRPVVTS--------TAAPK 120

Query: 121 PSSPKGRSSSVAASPPQTELLDKDSRKNPSPVPSPSIPKSIPAVPSPYQS--PKPKAAAL 180
           PSSPKG+S S+  SPP+    DK+S K+P+P PSPSIPKSIPAVPSPYQS  PKPKA A 
Sbjct: 121 PSSPKGKSHSLGGSPPRNGSFDKESNKHPTPAPSPSIPKSIPAVPSPYQSPKPKPKATAS 180

Query: 181 PPSPLLLPLPQLQPVAEPTLETIPQEVERKTVVFQKVMEKPSPPDHNHNNKKQEP----- 240
           PPSPL+LP PQLQ VAEP  ETIPQEVERKTVVFQKVMEKPSPPDH+ NN   +      
Sbjct: 181 PPSPLVLPPPQLQFVAEPRPETIPQEVERKTVVFQKVMEKPSPPDHDINNYNSQASGFGK 240

Query: 241 --KKNDIYKEKEKGNGAKK----AEEKDSNPRVITMAGENRGASMEVVLSDK-------- 300
             KK+D    ++KGNGAKK    + +KDS+ RVITMAGENRGASMEVVLSDK        
Sbjct: 241 NGKKHD--DNQDKGNGAKKPFVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQ 300

Query: 301 ---SDSG--SDESKDKEGKKKSMGTRNVHPMKAFCNSNVQGINNSILMNSNFSHHDPGIH 349
              SD+G  +++SKD +  KKS   R+  PMKAF NSNVQGINNSILM+S F+HHDPGIH
Sbjct: 301 INQSDNGDTTNDSKDNKSNKKSTACRSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIH 355

BLAST of Sed0017381 vs. ExPASy TrEMBL
Match: A0A6J1KIF7 (extensin-like OS=Cucurbita maxima OX=3661 GN=LOC111494246 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 2.5e-89
Identity = 228/368 (61.96%), Postives = 260/368 (70.65%), Query Frame = 0

Query: 1   MAGPMPRPWFRLGSFTRPTTTATPAAPATEQPRPVPPRIRPLLIRPAAATEPSQPTTP-Q 60
           MAG +PRPWFRLGS TRP TTAT  AP T+QPRP PPR+RP LIR  + TE ++PTTP Q
Sbjct: 1   MAGQVPRPWFRLGSMTRP-TTATTTAPVTDQPRPAPPRMRPPLIRTTSLTELAEPTTPLQ 60

Query: 61  PPKSPPQPPRPALQTPLVKKEASPPPTVAKTLTKPVLPMLARPVVPSPSNVPKADTAAAK 120
             KSPPQ PR A  TP  KKEASPPP           P L RPVV S        TAA K
Sbjct: 61  SAKSPPQLPRLAPLTPQPKKEASPPPPP---------PPLTRPVVTS--------TAAPK 120

Query: 121 PSSPKGRSSSVAASPPQTELLDKDSRKNPSPVPSPSIPKSIPAVPSPYQS--PKPKAAAL 180
           PSSPKG+S S+  SPP+    DK+S K+P+PVPSPSIPKSIPAVPSPYQS  PKPKA A 
Sbjct: 121 PSSPKGKSHSLGGSPPRNGSFDKESNKHPTPVPSPSIPKSIPAVPSPYQSPKPKPKATAS 180

Query: 181 PPSPLLLPLPQLQPVAEPTLETIPQEVERKTVVFQKVMEKPSPPDHNHNNKKQEP----- 240
           PPSPL+LP PQLQ VAEP  ETI QEVERKTVVFQKVMEKPSPPDH+ NN   +      
Sbjct: 181 PPSPLVLPPPQLQFVAEPRPETILQEVERKTVVFQKVMEKPSPPDHDINNYHSQASGFGK 240

Query: 241 --KKNDIYKEKEKGNGAKK----AEEKDSNPRVITMAGENRGASMEVVLSDKSDSG---- 300
             KK+D    ++KGNGAKK    + +KDS+ RVITMAGENRGASMEVVLSDK+++     
Sbjct: 241 NGKKHD--DNQDKGNGAKKPFVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQ 300

Query: 301 ---------SDESKDKEGKKKSMGTRNVHPMKAFCNSNVQGINNSILMNSNFSHHDPGIH 342
                    +++SKD +  KKS    +  PMKAF NSNVQGINNSILM+S F+HHDPGIH
Sbjct: 301 TNQSDKEDTTNDSKDNKSNKKSTACSSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIH 348

BLAST of Sed0017381 vs. ExPASy TrEMBL
Match: A0A6J1H2W2 (pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459978 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.7e-82
Identity = 215/385 (55.84%), Postives = 254/385 (65.97%), Query Frame = 0

Query: 1   MAGPMPRPWFRLGSFTRPTTTATPAAPATEQPRPVPPRIRPLLIRPAAATEPSQPTTPQP 60
           MAG +PRPWFRLGS TRPTT AT  +  T+QPRPVP RIRP +IR A+ TEP++PTTPQP
Sbjct: 1   MAGQLPRPWFRLGSLTRPTTGATTGS-GTDQPRPVPARIRPPVIRTASFTEPAEPTTPQP 60

Query: 61  PKSPPQPPR-----------PALQTPLVKKEASPPPTVAKTLTKPVLPMLARPVVPSPSN 120
            KSPPQ P            P   TP VKK ASPP              + RP +PSP  
Sbjct: 61  SKSPPQTPMKKAASPPQLPLPGSLTPPVKKPASPPAAA-----------VTRPALPSP-- 120

Query: 121 VPKADTAAAKPSSPKGRSSSVAASPPQTELLDKDSRKNPSPVPSPSIPKSIPAVPSPYQS 180
                   AK  SPKG+S SV  SP + EL++KDS K  SPV SP +PKSIPAVP+PYQS
Sbjct: 121 --------AKHISPKGKSGSVVGSPTKNELVNKDSSKQASPVSSPLVPKSIPAVPTPYQS 180

Query: 181 PKPKAAALPPSPLLLPLPQLQPVAEPTLETIPQEVERKTVVFQKVMEKPSPPDHN----- 240
           PKPKAAA PPSPL LP PQLQ V EP  E+IPQEVERKTVVFQKVM+K S  +H+     
Sbjct: 181 PKPKAAASPPSPLTLPPPQLQSVDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYH 240

Query: 241 ------HNNKKQEPKKNDIYKEKEKGNGAKKA-------EEKDSNPRVITMAGENRGASM 300
                   N KQEPKK+D  + K+K  GAKKA       ++ ++N RVITMAG+N GASM
Sbjct: 241 THAAEFGQNGKQEPKKSDEDESKDKAIGAKKALLESSNDKDTNTNTRVITMAGKNNGASM 300

Query: 301 EVVLSDKS-----DSGSDESKDKEGKKKSMGTRNVHPMKAFCNSNVQGINNSILMNSNFS 352
           E+ LSDK+     D+ ++  KD +  KK++ TRN  PMKAF NSNVQGINNSILM+S F+
Sbjct: 301 EIFLSDKNKNKNEDTTNNNLKDNKSTKKAIRTRNGLPMKAFFNSNVQGINNSILMDSKFT 360

BLAST of Sed0017381 vs. ExPASy TrEMBL
Match: A0A6J1KY68 (serine/arginine repetitive matrix protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499277 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 5.1e-79
Identity = 210/385 (54.55%), Postives = 249/385 (64.68%), Query Frame = 0

Query: 1   MAGPMPRPWFRLGSFTRPTTTATPAAPATEQPRPVPPRIRPLLIRPAAATEPSQPTTPQP 60
           MA  +PRPWFRLGS TRPTT AT   P T+QPRPVP RIRP +IR A+ TEP++PTTPQ 
Sbjct: 1   MAAQLPRPWFRLGSLTRPTTGAT-TGPGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQQ 60

Query: 61  PKSPPQPPR-----------PALQTPLVKKEASPPPTVAKTLTKPVLPMLARPVVPSPSN 120
            KSPPQ P            P   TP VKK ASPP   A  +T P LP            
Sbjct: 61  SKSPPQTPMKKAASPPQLPLPGSLTPPVKKAASPP---AAAVTIPALP------------ 120

Query: 121 VPKADTAAAKPSSPKGRSSSVAASPPQTELLDKDSRKNPSPVPSPSIPKSIPAVPSPYQS 180
                 + AK  SPKG+S SV  SP + EL++KDSRK  SPV SP +PKSIPAVP+PYQS
Sbjct: 121 ------SPAKHISPKGKSGSVVGSPTKNELVNKDSRKQASPVSSPLVPKSIPAVPTPYQS 180

Query: 181 PKPKAAALPPSPLLLPLPQLQPVAEPTLETIPQEVERKTVVFQKVMEKPSPPDHN----- 240
           PKPK AA PPSPL LP PQLQ V EP  ETIPQ VERKTVVFQKV++K S  +H+     
Sbjct: 181 PKPKTAASPPSPLTLPPPQLQSVDEPKHETIPQAVERKTVVFQKVIDKASQAEHDIASYH 240

Query: 241 ------HNNKKQEPKKNDIYKEKEKGNGAKKA-------EEKDSNPRVITMAGENRGASM 300
                   N KQEPKK+D  + K+K  GA KA       ++ ++N +VITMAG+N GA M
Sbjct: 241 TRAAEFGQNGKQEPKKSDEDESKDKAIGATKALLESSNDKDTNTNTKVITMAGKNNGAFM 300

Query: 301 EVVLSDKS-----DSGSDESKDKEGKKKSMGTRNVHPMKAFCNSNVQGINNSILMNSNFS 352
           E+ LSDK+     D+ ++  KD +  KK++ TRN  PMKAF NSNVQGINNSILM+S F+
Sbjct: 301 EIFLSDKNKNKNEDTTNNNLKDNKSTKKTIRTRNGVPMKAFFNSNVQGINNSILMDSKFT 360

BLAST of Sed0017381 vs. ExPASy TrEMBL
Match: A0A6J1H458 (pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111459978 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 1.3e-77
Identity = 208/374 (55.61%), Postives = 251/374 (67.11%), Query Frame = 0

Query: 1   MAGPMPRPWFRLGSFTRPTTTATPAAPATEQPRPVPPRIRPLLIRPAAATEPSQPTTPQP 60
           MAG +PRPWFRLGS TRPTT AT  +  T+QPRPVP RIRP +IR A+ TEP++PTTPQP
Sbjct: 1   MAGQLPRPWFRLGSLTRPTTGATTGS-GTDQPRPVPARIRPPVIRTASFTEPAEPTTPQP 60

Query: 61  PKSPPQPPRPALQTPLVKKEASPPPTVAKTLTKPVLPMLARPVVPSPSNVPKADTAAAKP 120
            KSPPQ P        +KK ASPP        +  LP    P V  P++ P A  A  +P
Sbjct: 61  SKSPPQTP--------MKKAASPP--------QLPLPGSLTPPVKKPASPPAA--AVTRP 120

Query: 121 SSPKGRSSSVAASPPQTELLDKDSRKNPSPVPSPSIPKSIPAVPSPYQSPKPKAAALPPS 180
           + P   S +   SP + EL++KDS K  SPV SP +PKSIPAVP+PYQSPKPKAAA PPS
Sbjct: 121 ALP---SPAKHISPTKNELVNKDSSKQASPVSSPLVPKSIPAVPTPYQSPKPKAAASPPS 180

Query: 181 PLLLPLPQLQPVAEPTLETIPQEVERKTVVFQKVMEKPSPPDHN-----------HNNKK 240
           PL LP PQLQ V EP  E+IPQEVERKTVVFQKVM+K S  +H+             N K
Sbjct: 181 PLTLPPPQLQSVDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYHTHAAEFGQNGK 240

Query: 241 QEPKKNDIYKEKEKGNGAKKA-------EEKDSNPRVITMAGENRGASMEVVLSDKS--- 300
           QEPKK+D  + K+K  GAKKA       ++ ++N RVITMAG+N GASME+ LSDK+   
Sbjct: 241 QEPKKSDEDESKDKAIGAKKALLESSNDKDTNTNTRVITMAGKNNGASMEIFLSDKNKNK 300

Query: 301 --DSGSDESKDKEGKKKSMGTRNVHPMKAFCNSNVQGINNSILMNSNFSHHDPGIHLVFS 352
             D+ ++  KD +  KK++ TRN  PMKAF NSNVQGINNSILM+S F+HHDPGIHL+FS
Sbjct: 301 NEDTTNNNLKDNKSTKKAIRTRNGLPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLLFS 352

BLAST of Sed0017381 vs. TAIR 10
Match: AT2G46630.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 110095 Blast hits to 59224 proteins in 2216 species: Archae - 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843; Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876 (source: NCBI BLink). )

HSP 1 Score: 84.3 bits (207), Expect = 2.1e-16
Identity = 131/397 (33.00%), Postives = 172/397 (43.32%), Query Frame = 0

Query: 7   RPWFRLGSFTRPTTTATPAAPATEQPRPVPPRIRPLLIRPAAATEPS-----QPTTPQPP 66
           RPWFRL S  RPT   +   P    P+P P     L++RP  A +PS     QP +P   
Sbjct: 5   RPWFRLSSIARPTAQGSSDPP---PPQPRPTSRSSLVVRP-PAKQPSPPRQRQPRSPPRQ 64

Query: 67  KSPPQPPRPALQTPLVKKEASPPPTVAKTLTKPVLPMLARPVVPSPSNVPKADTAAAKPS 126
           + PP PPR   Q PL       PPT       P     +R +  SP   PK    AA P 
Sbjct: 65  QDPPSPPRQQ-QQPLTPPRQKAPPTSPPQERSPYHSPPSRHM--SPPTPPK----AATPP 124

Query: 127 SPKGRSSSVAASPPQTELLDKDSRKNPSPVPSP-----SIPKSIPAVPSPYQSPKPKAAA 186
            P  RSS  +   P+ E+ +    + P+  PSP     S         SP +S   + A 
Sbjct: 125 PPPPRSSYTSPPSPK-EVQEALPPRKPNSPPSPAHSSRSTTSESVKTRSPSESENHRKAP 184

Query: 187 LPP--SPLLLPLPQLQPVAEPTLETIPQEVERKTVVFQKVMEKPSPPDHNHN-----NKK 246
            P   SP  LP   L    E T        ++  +  +K  +      HN N     N+ 
Sbjct: 185 SPRVLSPYSLPASLLHSERETT--------QKNILTAEKTSQTHETNHHNQNHNHDYNQN 244

Query: 247 QEPKKNDIYKEKE--KGNGAKKAEEKDS--------NPRVITMAGENRGASMEVVLSDKS 306
               +N  Y + +  +GN  KK   + S        + RVIT+AGEN+GA ME++ S + 
Sbjct: 245 HNYNQNHSYNQNQNHQGNNPKKMHRQPSSSDSENIMSTRVITIAGENKGAVMEILRSPQG 304

Query: 307 D-------------------------SGSDESKDKEGKKKSMGTRNVH-------PMKAF 345
           +                         S S  S + EGKKK+  T+NV        PMKAF
Sbjct: 305 NKTGGSGTHSSRVSHGTGEKGRRLQSSSSSSSDEGEGKKKT--TKNVPNKGNSNLPMKAF 364

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022964490.11.4e-9162.67extensin-like [Cucurbita moschata] >KAG6593605.1 hypothetical protein SDJN03_130... [more]
XP_023513718.16.0e-9061.33proline-rich receptor-like protein kinase PERK8 [Cucurbita pepo subsp. pepo][more]
XP_022999909.15.1e-8961.96extensin-like [Cucurbita maxima][more]
KAG7013807.13.5e-8255.84hypothetical protein SDJN02_23974, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022958822.13.5e-8255.84pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucurbit... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1HKY36.9e-9262.67extensin-like OS=Cucurbita moschata OX=3662 GN=LOC111464501 PE=4 SV=1[more]
A0A6J1KIF72.5e-8961.96extensin-like OS=Cucurbita maxima OX=3661 GN=LOC111494246 PE=4 SV=1[more]
A0A6J1H2W21.7e-8255.84pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 OS=Cucurb... [more]
A0A6J1KY685.1e-7954.55serine/arginine repetitive matrix protein 1 isoform X1 OS=Cucurbita maxima OX=36... [more]
A0A6J1H4581.3e-7755.61pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2 OS=Cucurb... [more]
Match NameE-valueIdentityDescription
AT2G46630.12.1e-1633.00unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXP... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 337..356
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 218..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..301
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 339..356
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 278..297
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..135
NoneNo IPR availablePANTHERPTHR33472OS01G0106600 PROTEINcoord: 4..345
NoneNo IPR availablePANTHERPTHR33472:SF1EXTENSIN-RELATEDcoord: 4..345

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0017381.1Sed0017381.1mRNA