Sed0017378 (gene) Chayote v1

Overview
NameSed0017378
Typegene
OrganismSechium edule (Chayote v1)
DescriptionPH, RCC1 and FYVE domains-containing protein 1-like
LocationLG05: 12954722 .. 12961299 (-)
RNA-Seq ExpressionSed0017378
SyntenySed0017378
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCAAGAAGCCAACATTATAGATTCCAACAGTCACATACTGTCTAATGGGTCTAGCTCTGCTAGTAACCGTTGTTCAGGTCACAGACAAGGAAATTCTGATTCAACAACTAGAAATGTCAACAAGATTAAAGAAAGAGATTCTCATAATGATGCCGAATGGGATGATCAAGATGAGCTTGGTGTATATCACCTTTACTTCTCTTCAGGGTGGTGCCAAAGATCTCAAGCGAGTGTGTTTTAGGTATAATTCTTCAGCCTCATTGACCTTTTCATTTGCACAAGAGTTGATTTGTGTACAAAATATAAAGAGAGGAATATTTTTCTATATTATTCTTTGATAATAGGTGTTTCTTAAATAGAGAAACCCTTACTTTACAAATAAGGAAACAAATAATACATTAGGATAATATCCTCTACAAATCAATAATATTATAAATACAAGATACTAATCCAATAAATATGGAAACAAATAATTTGAGAATAATCATCAAATAACCAACACTCCCCCTCAAGCTGGACTAAAAATGTCTTCCATTTCCAGCTTGCCAATCATCTTATTGAAATGTCGCTCAGGAAGACCTTTCGTAAAGACGTCAGCCACTTGTTCTGAAGTAGGCATATAGGGGATACATATGGTTCCAGCTTCAATCTTCTCCTTTATAAAATGTTTGTCAACTTCAATATGTTTGGTCCTATCGTGAAGGACTGGATTGTGGGCAATGGAAATGGCTGTCTTGTTATCACAATACACACGTATTGGTGTTGATTGAGTGAACTTTAGCTCCTCCAATATTCTCTTAATCCATATACCCTCACAAATACCATGAGCTAGTGCCCTAAATTCGGCTTCAAAGACTACTTCTTGCCACCACATTTTGTTTTTACTACTCCAAGTGACTAAGTTTCCTCCAACAAAGGAGCAATAACTGAAGTTGACCTTCTATCGTGGTACTACACCTTGATCGGCATCTGTGTAGATTTCAACATGAAGATGACCTTGTTTTTTAAATAGTATACCTTTTCCTGGAGTGCCTTTCAAGTATCTTAAAATTCTATTTACTGCTTCAAAGTGAGCAGGACCAGGAGCATGCATAAATTGACTAACCATACTAACGGCGAAGGCTATGTCAGGACGTGTGTGAGATAGGTAAATAAGTCTCCCAACAAGTCTCTGATATTTTTCTTTATCCTTTACTTCTTCACATGTTGATGTTTGCAATTTCACATTTTGTTCAATAGGAGTTTCTACTGGTCTACAACCGAGTAATCTAGTTTCTTCTAGTAGATCTATTACATATTTCCTTTGATTTACTAGAATTCCACTTTTCGATCTTGCAAACTCCATTCCTAAAAAATATTTTAGGACTCCCAGATCTTTGATTTGAAACTCATTAGCTAAATTTTTCTTCAAAATGGTTATTTCCAGATCATCATTGCCAGTTATTATTATGTCATCAACATACACTATCAAAATGACCATCTTGCCGTTTCTAGTATGTCTATAAAATATAGCATGATCTGCTTTACTTTGAAGAAATCCATAGCTTGTAACTGCCTTCTCAAACCGTTCAAACCATGCTCTGGGTGACTGCTTGAGGCCATATAATGACTTATGTAACCTGCATACATTTTTACTTCCATAATTTATTTCAAGGCCAGGTGGTAAGTCCATAAATACCTCTTCTTCGAGATCACCGTTAAGGAATGCATTTTTTACATCAAGTTGATACAAAGGCCATTCTTCATTGACAGCAATAGCTAGCAATACCCTAATAGAGTTAATTTTGGCAACTGGGGCAAATGTCTCTTGATAATCGATTCCATAGGTTTGGGTGAATCCCTTAGCAACCAATCTTGCTTTGTACCTTTCAACACTCCCATCTGCATGACATTTTATAGTGAACACCCATTTGCACCCTACTGTCTTCTTGTCTTTTGGCAGCTCAACTATGTCCCACGTGTGATTCTGTTTTAGAGCATTCATTTCCTCCATGACTGCTAAATTCCAATTCGGATCATCTAGGGCCTTTTGTATATTCCTTGGGACAAACAGGTTAGTTATCCTAGAGGTAAAAGCCCTATGAGTGTCGAGATGCTTTTTGTAGGATAAGTAATTCTCAATGGGATATTTGGTACAATTTCGGGTTCCTTTCCTATAAGCTATGGGAATATCAAGGTCAGAGCCATTGGTTATATTATTTTCAGGAGGAGAAGAAGTGGAAGGAAGAGTTACAGATAAAGTACCTGGATTATCAGGATCAGTTGTCGGAGTGTCAGATTGATCATGCGTCGGATTAGCCATCTTGCCTATGTTCTTTTGACTTAGCTTTCTCCTAGTATAAACTTGAAGTTCAGGTTGATTATTCTGTAGTGTTTCTCCCCTTGAGGAGGAACCTTCCATATTGGGCATTGTAACAACCTCAGAGTGTATGATATTTGGAAGAGGTGAGGTATCCAAAAATTTCCTTCAAATGTAGATGTCTCCCCCTGAAGGGAATGAGGTTTAAAAAGGGATTGGTTTTCTACAAATGACACATCCATACTTTCAAAAAATCTCTTTGTTACAGGATCATAACATCTATAGGCCTTTTTATGGGAGGTATAGCCTAGAATATGCATTTGGTAGCCCGAGGATCTAGTTTGGACTGTGAAGGGTTGGACACATAAACAAAGGCAATACATCCAAAAACCTTGATTTGTAGATCTAAGAAAATTCGAATTGTAGGAAAGGTGGTTCTTAGGTATTCTAGAGGAGTTTGAAAACCTAAAACCTTAGTAGGCATTCGATTTATGAGGTAAGTAGCGGTAAGAATCGCGTCACCCCATAAATACTGAGGGACATTCATAGAGAACATAATAGCCCTAGAAACCTCCAATAAATGTCTATTCTTTCGTTCTGCGATGTCATTTTGTTGAGGAGTATTTCTACAGGTTGATTGGTGATAGACTCCTTTGGTGTGTAAGAACTCAGTTAGATAGGTATTGAAATATTCAGTGCCATTGTCAGAATGTAAGATACTGATTTTGGTTTTAAATTGGGTTTCAATCATGTTATAGAAACGGATAAATACCTCCTTAAAATCAGACTTGTGAGTTAAAAGATACACCCAAGTTACACGGGTGTGATCATCTATAAAGGTAACGAACCACCGTTTCCCACTTTGAGTTACTACCTTAGATGGACCCCAGACATCGCTATGAATTAAATAAATAAGAAATGCGATGAGTTTTTGCAAAGGCACAATGTTCGCAATGAAAGATAGAACAATCAATTCCTTTAAAGAGTTCTGGAAACAAATACTTTAAATAGAAAAAACTGGGAAGTCCTAATCTATAATGCCAAAGCATCAAAGTTTCCCTAACAGACGGAGAACTAACACTACTTAAACCCTGAACCTTTTTATGACTAGTTGAAGCTTCCTCAAAACAGTAAAGGCCATCAAGCATCCTAGCACGTCCAATCGTCTTCCCCGACTCCTGTTCCTGAAAGACACAATGTGAGTCATAGAAAATAACACGACAGTTAGAATCTCTAGAAATCTTGCTAACTGAAAGCAAATTGCAAGCTAATTTGGGAACATGAAGGACGGATTGTAAGGTAAGGTGTGGAGATAACTTAATAGTTCCTTTTCCAAAAATAGAATTGAAACTACCATCTGCTATTCTAATTTGTTCATTACAATATAATGGAGAGTATGACTCGAAGAGTTTTGAGGAACTAGTCATATGGTCAGAAACTCCGAAATCTATAATCCACGAAGCTTAAGTAAGACAGGAGAAGGCATGAGGACAATTACCTGTTTGTGCCAAGGAAACACTAGGATTTCCATAAGTCGTAGTGGTCTTGAGCAGCTTCAGGATTTGATCAATTTGCTCTTTATTGAATGGAGTTGATTCAGCACTATTGGCACTAGAAGCTGGTGGACGAATACTCTTTTCACCTTGTCTATTACTTTTATGATTGGCAGGTTTTCCATGGATCTTCCAACATGTCTCCCGAGTATGTCTCGGTTTGTTGCAGTGATCACACCACACACGAGGCTTATTTGTCTGATCAGATGCCTTGTTTGCAGTGGCTTCAACAACTAACGCAAAGCTTTCTTCTGTATCAACTAGTTTTTACCCATCATCACATGTTGCCGACTTTCTTCCCTGCGTACTTCAGAAAACACTTCGTTGATATTAGGAAGGTTAGCTTTACCTATTATTCTGCCTCGAACTTCATCAAACTCAACATTAAGTCCAGCCAATAATTTGTAAATTCGACCATTCTCAACAATTTTCTTATAGTGCTTTTGATCTTCAGTGGACTTCCATTCATATTTATCAAACAAATCAAGGTCCTGCCAAATTTTCTTCAGTAAGTGAAAGTACTGAGTAACGGAATTACTCCCTTGTTTTATGTCACTTAGTTTGAGATTTAGTTCAAACACTTGTGACTGATTTTCTACGTCGCAATATATCTCTGTGACATTGTCCCATAATTCCTTAGCTGTAGAGTAACACATATAGGTGCTACTAATGTCTTCCACCATGAAATTTACTAGCCATGTCATCACCATGGAGTTTTTGGCATCCCATGTAGCAAAAGATGAATCATCTTTGGAAGGTGCTACCTTGTCTCCAGTAAGGTACCCAATCTTTCCTTGTCCACAAATATACATTCGAACACTTTGTGACCACCGAAGAAAGTTGTCACCATTAAGTCGAATGGTTGTGATTTGGATAGTAGGGCTATGGGTTGAAATTCTAGCAACTGATATCTTGTCTTCAGACATTATTCTTCAGCAAAAAACAAGATTTTAAGGCTAGATAACTAAAAAACAGCAGTTTAAATATAGTAAACTACACATGAAAAAAAATAAGCAGCGGTTGAAAAACTCAATCGATTGGCCAAAAACTTGAATAAATAACCCAAACTTGAGAAACAAGCAAAGAGCAAGGTTTCTGAGCTGCGGCGAGTTGAATGGACAAAGAAGCGCGCGAGTTCTCAAGCAATGAAACAACTGGGTTCTGGCGGCGGCGAGTTCTCATCACGGATAAGAGTGAACCGATGTTCATTGGCGGCGAGTGGAGATAGGCAAAGTGCAAGTGGTGAATTGAATTGACAACAGTTGTTATAGGGTTTTGAAAAAATATTTTTATTTCTCTTTTTCTTTGTTTGGCTCTAATACCATGTACAAAATATAAAGAGAGGAATATATTATTCTCTGATAATAGATGTTTCTTAAATAGAGAAACCCTTATTTTACAAATAAGGAAACAAATAATACATTATGATAATATCCTCTACAACTCAATAATATTATAAATACAAGAACTAATCCAATAAATATGGAAACAAATAATTTGAGAATAATCATCAAATAACCAACAATTTGAAACTAGTAATTTATACAACTTCGTTATTCGACTATTGAAAAGAAGGCACATCCTCTTGTTTGGGTGGCTACTTCACTTAGTGAAGTACATAGAATATTGTTATGTTTACAGGCTGTCTCATAGCATATTTGAGGCAATTTATCCAAGGATAGGCTATGATAAAATCAACCACCATTGCAATACTTTATTATTCCAAAACTTCACACATGGTGTTGAAGGAACTACGAAATTCATTTCCTTTCACCGTTAACTATCAAACTTTAAACTTCCATGCTTTCTTGTCATTATTGATCAAGCATTTATTCTTGTTTGATGACATTGAATTTTGTGAAGCATCTTATGTGTAGAACCTGGTGGCCCATCTGTCCAGTCCTATCTCACATGACTAACAATAATATCGTCTTTATAAAGCATATGGTAGGTGTGCAAGTTAAAATTGACAAAACCATCCAAACCAACCAAACTGCACTGGTTTGATTTGGAACCGTTTCAGCTTGGACATTTTGAGTTTGAAACAAAGAAAATCGATTATATTCCGTTGGTTTCGAATTTAGTTAAATTTGCATCGAATATAACCGATCTGACTGACACCATTAGTACTATAAACTAGAATGTAAAATACAAAAGTGTGGGTTTGAGACAGGGGCTGAGATTTTTTGTATGCCTATTGTAATTAGATACAGGCCAATACCGTGTATCATTCACAGTAGCAGCCCAAAAGCCAAGAATCGAACAGATTGAACCATTAGTTCTTTAGATTGGTGCAGCTTGGTTACCTTACTATGTGTTTCGGCTTGGTTTACTCATTTTTCCTATAAATAATAATGCTTCGGTGCCACATTCAAACGAAGCCAAAGCAAACTGTTCACACTCGTATGGGCTACCATAGTTAGATGATGCATAATTTATAACACATCACTTCTTTTGTTGCAGTCGGAAACGATTTATCGAGAAACAAGCAGAACAGTGGTGGGCAGAGAATCGAGCAAGAGTATGAAGAGGTAATTAAATTTGCAGGTCTTCTAAGTTTGCTTTCTTCAAAATCCCTTGGGAATGAGCCAGACTTTTTATCATGGTCATTAGAAGCGTCAGGGGCCTACTCAGTCAAATCAGCCCCGTCTTGGTAATTTTGTGGATTCTTTTGAATGGCAAACTCAACTCAGCAGAGGTTCTTCAAAGGAAGCTATCTAA

mRNA sequence

ATGTCTCAAGAAGCCAACATTATAGATTCCAACAGTCACATACTGTCTAATGGGTCTAGCTCTGCTAGTAACCGTTGTTCAGGTCACAGACAAGGAAATTCTGATTCAACAACTAGAAATGTCAACAAGATTAAAGAAAGAGATTCTCATAATGATGCCGAATGGGATGATCAAGATGAGCTTGGTGTATATCACCTTTACTTCTCTTCAGGGTGGTGCCAAAGATCTCAAGCGATCGGAAACGATTTATCGAGAAACAAGCAGAACAGTGGTGGGCAGAGAATCGAGCAAGAGTATGAAGAGAAGCGTCAGGGGCCTACTCAGTCAAATCAGCCCCGTCTTGGTAATTTTGTGGATTCTTTTGAATGGCAAACTCAACTCAGCAGAGGTTCTTCAAAGGAAGCTATCTAA

Coding sequence (CDS)

ATGTCTCAAGAAGCCAACATTATAGATTCCAACAGTCACATACTGTCTAATGGGTCTAGCTCTGCTAGTAACCGTTGTTCAGGTCACAGACAAGGAAATTCTGATTCAACAACTAGAAATGTCAACAAGATTAAAGAAAGAGATTCTCATAATGATGCCGAATGGGATGATCAAGATGAGCTTGGTGTATATCACCTTTACTTCTCTTCAGGGTGGTGCCAAAGATCTCAAGCGATCGGAAACGATTTATCGAGAAACAAGCAGAACAGTGGTGGGCAGAGAATCGAGCAAGAGTATGAAGAGAAGCGTCAGGGGCCTACTCAGTCAAATCAGCCCCGTCTTGGTAATTTTGTGGATTCTTTTGAATGGCAAACTCAACTCAGCAGAGGTTCTTCAAAGGAAGCTATCTAA

Protein sequence

MSQEANIIDSNSHILSNGSSSASNRCSGHRQGNSDSTTRNVNKIKERDSHNDAEWDDQDELGVYHLYFSSGWCQRSQAIGNDLSRNKQNSGGQRIEQEYEEKRQGPTQSNQPRLGNFVDSFEWQTQLSRGSSKEAI
Homology
[Close]
BLAST of Sed0017378 vs. NCBI nr
Match: KAA0061774.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 86.3 bits (212), Expect = 2.3e-13
Identity = 49/70 (70.00%), Postives = 58/70 (82.86%), Query Frame = 0 

Query: 1    MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQD 60
            MS EA++I+SNSH+LSNGSS+AS R SGH RQGNSDSTTRN NK+KE DS +DAEW +QD
Sbjct: 975  MSLEADVIESNSHLLSNGSSTASIRSSGHNRQGNSDSTTRNGNKVKESDSRHDAEWVEQD 1034

Query: 61   ELGVYHLYFS 70
            E GVY  + S
Sbjct: 1035 EPGVYITFTS 1044

[Close]
BLAST of Sed0017378 vs. NCBI nr
Match: XP_038900986.1 (PH, RCC1 and FYVE domains-containing protein 1 [Benincasa hispida])

HSP 1 Score: 85.5 bits (210), Expect = 3.9e-13
Identity = 49/70 (70.00%), Postives = 58/70 (82.86%), Query Frame = 0 

Query: 1    MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQD 60
            MS EA+II+SNSH+LSNGS++AS R SGH RQGNSDSTTRN NK+KE DS +DAEW +QD
Sbjct: 978  MSLEADIIESNSHLLSNGSTTASIRSSGHNRQGNSDSTTRNGNKVKESDSRHDAEWVEQD 1037

Query: 61   ELGVYHLYFS 70
            E GVY  + S
Sbjct: 1038 EPGVYITFTS 1047

[Close]
BLAST of Sed0017378 vs. NCBI nr
Match: TYJ96116.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 84.7 bits (208), Expect = 6.6e-13
Identity = 48/70 (68.57%), Postives = 57/70 (81.43%), Query Frame = 0 

Query: 1    MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQD 60
            MS EA++I+SNSH+LSNGS +AS R SGH RQGNSDSTTRN NK+KE DS +DAEW +QD
Sbjct: 985  MSLEADVIESNSHLLSNGSGTASIRSSGHNRQGNSDSTTRNGNKVKESDSRHDAEWVEQD 1044

Query: 61   ELGVYHLYFS 70
            E GVY  + S
Sbjct: 1045 EPGVYITFTS 1054

[Close]
BLAST of Sed0017378 vs. NCBI nr
Match: XP_008449668.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103491479 [Cucumis melo])

HSP 1 Score: 84.7 bits (208), Expect = 6.6e-13
Identity = 48/70 (68.57%), Postives = 57/70 (81.43%), Query Frame = 0 

Query: 1    MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQD 60
            MS EA++I+SNSH+LSNGS +AS R SGH RQGNSDSTTRN NK+KE DS +DAEW +QD
Sbjct: 977  MSLEADVIESNSHLLSNGSGTASIRSSGHNRQGNSDSTTRNGNKVKESDSRHDAEWVEQD 1036

Query: 61   ELGVYHLYFS 70
            E GVY  + S
Sbjct: 1037 EPGVYITFTS 1046

[Close]
BLAST of Sed0017378 vs. NCBI nr
Match: KAG7010291.1 (Ultraviolet-B receptor UVR8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-12
Identity = 48/70 (68.57%), Postives = 58/70 (82.86%), Query Frame = 0 

Query: 1    MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQD 60
            MS EA+II+SNS++LSNGS++ASNR SGH RQ NSDSTTRN NK+KE DS +DAEW +QD
Sbjct: 978  MSLEADIIESNSNLLSNGSTTASNRSSGHNRQSNSDSTTRNGNKVKESDSRHDAEWVEQD 1037

Query: 61   ELGVYHLYFS 70
            E GVY  + S
Sbjct: 1038 EPGVYITFTS 1047

[Close]
BLAST of Sed0017378 vs. ExPASy TrEMBL
Match: A0A5A7V3C5 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001530 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.1e-13
Identity = 49/70 (70.00%), Postives = 58/70 (82.86%), Query Frame = 0 

Query: 1    MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQD 60
            MS EA++I+SNSH+LSNGSS+AS R SGH RQGNSDSTTRN NK+KE DS +DAEW +QD
Sbjct: 975  MSLEADVIESNSHLLSNGSSTASIRSSGHNRQGNSDSTTRNGNKVKESDSRHDAEWVEQD 1034

Query: 61   ELGVYHLYFS 70
            E GVY  + S
Sbjct: 1035 EPGVYITFTS 1044

[Close]
BLAST of Sed0017378 vs. ExPASy TrEMBL
Match: A0A5D3BB50 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00790 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 3.2e-13
Identity = 48/70 (68.57%), Postives = 57/70 (81.43%), Query Frame = 0 

Query: 1    MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQD 60
            MS EA++I+SNSH+LSNGS +AS R SGH RQGNSDSTTRN NK+KE DS +DAEW +QD
Sbjct: 985  MSLEADVIESNSHLLSNGSGTASIRSSGHNRQGNSDSTTRNGNKVKESDSRHDAEWVEQD 1044

Query: 61   ELGVYHLYFS 70
            E GVY  + S
Sbjct: 1045 EPGVYITFTS 1054

[Close]
BLAST of Sed0017378 vs. ExPASy TrEMBL
Match: A0A1S3BNH2 (LOW QUALITY PROTEIN: uncharacterized protein LOC103491479 OS=Cucumis melo OX=3656 GN=LOC103491479 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 3.2e-13
Identity = 48/70 (68.57%), Postives = 57/70 (81.43%), Query Frame = 0 

Query: 1    MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQD 60
            MS EA++I+SNSH+LSNGS +AS R SGH RQGNSDSTTRN NK+KE DS +DAEW +QD
Sbjct: 977  MSLEADVIESNSHLLSNGSGTASIRSSGHNRQGNSDSTTRNGNKVKESDSRHDAEWVEQD 1036

Query: 61   ELGVYHLYFS 70
            E GVY  + S
Sbjct: 1037 EPGVYITFTS 1046

[Close]
BLAST of Sed0017378 vs. ExPASy TrEMBL
Match: A0A6J1J5L8 (PH, RCC1 and FYVE domains-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111483676 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 5.4e-13
Identity = 48/70 (68.57%), Postives = 58/70 (82.86%), Query Frame = 0 

Query: 1    MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQD 60
            MS EA+II+SNS++LSNGS++ASNR SGH RQ NSDSTTRN NK+KE DS +DAEW +QD
Sbjct: 978  MSLEADIIESNSNLLSNGSTTASNRSSGHNRQSNSDSTTRNGNKVKESDSRHDAEWVEQD 1037

Query: 61   ELGVYHLYFS 70
            E GVY  + S
Sbjct: 1038 EPGVYITFTS 1047

[Close]
BLAST of Sed0017378 vs. ExPASy TrEMBL
Match: A0A6J1DFK1 (uncharacterized protein LOC111020619 OS=Momordica charantia OX=3673 GN=LOC111020619 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 5.4e-13
Identity = 48/70 (68.57%), Postives = 55/70 (78.57%), Query Frame = 0 

Query: 1    MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQD 60
            M  EA II+SNSH+LSNGSS+ASNR SGH RQGNSDS  RN NK+KE DS +DAEW +QD
Sbjct: 978  MPLEAEIIESNSHLLSNGSSTASNRSSGHNRQGNSDSAARNGNKVKESDSRHDAEWVEQD 1037

Query: 61   ELGVYHLYFS 70
            E GVY  + S
Sbjct: 1038 EPGVYITFTS 1047

The following BLAST results are available for this feature:
BLAST of Sed0017378 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0061774.12.3e-1370.00Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain ... [more]
XP_038900986.13.9e-1370.00PH, RCC1 and FYVE domains-containing protein 1 [Benincasa hispida][more]
TYJ96116.16.6e-1368.57Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain ... [more]
XP_008449668.16.6e-1368.57PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103491479 [Cucumis me... [more]
KAG7010291.11.1e-1268.57Ultraviolet-B receptor UVR8 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Sed0017378 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sed0017378 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V3C51.1e-1370.00Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain ... [more]
A0A5D3BB503.2e-1368.57Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain ... [more]
A0A1S3BNH23.2e-1368.57LOW QUALITY PROTEIN: uncharacterized protein LOC103491479 OS=Cucumis melo OX=365... [more]
A0A6J1J5L85.4e-1368.57PH, RCC1 and FYVE domains-containing protein 1-like OS=Cucurbita maxima OX=3661 ... [more]
A0A6J1DFK15.4e-1368.57uncharacterized protein LOC111020619 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
BLAST of Sed0017378 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF16627BRX_assoccoord: 9..46
e-value: 8.5E-7
score: 29.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..56

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0017378.1Sed0017378.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding