Sed0017292 (gene) Chayote v1

Overview


Name	Sed0017292
Type	gene
Organism	Sechium edule (Chayote v1)
Description	S-protein homolog
Location	LG01: 12455558 .. 12455995 (-)
RNA-Seq Expression	Sed0017292
Synteny	Sed0017292

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCCTCTAAACATGTTTTGTTTGATCATACTGTTTGCTTTTGTATCAAACATGAATATCAAGCCATGTTTTGCACAATCCAAGTATCAAACACGATTGTCGCAATGGAAAGTGAGCCTTGTGAATCAGATGAAGGATTCAACACTGGTCGTTCACTGCAAATCGAAGGACGACGATTTGGGCGAGCATGTGGTCACGGTCGGAACCAAATACTATTGGGAGTTCAGTGAAAATCTATGGCACACAACGTTGTATTGGTGCAATTTTAGCAGCAAATTTGGGAATGTTTCTGGACAAGTTTTTTGGCCGGAGAAAGGAACTTGGCTTACTGATCGATGTGATTTGAATACATGTACTTGGTTTGTTGGAGACAATGGCATTTCCTTACGTCTTGGAAATATCAAATCTCTTGAGTTAATATACCCTTGGAAGTGA

mRNA sequence

ATGAAGCCTCTAAACATGTTTTGTTTGATCATACTGTTTGCTTTTGTATCAAACATGAATATCAAGCCATGTTTTGCACAATCCAAGTATCAAACACGATTGTCGCAATGGAAAGTGAGCCTTGTGAATCAGATGAAGGATTCAACACTGGTCGTTCACTGCAAATCGAAGGACGACGATTTGGGCGAGCATGTGGTCACGGTCGGAACCAAATACTATTGGGAGTTCAGTGAAAATCTATGGCACACAACGTTGTATTGGTGCAATTTTAGCAGCAAATTTGGGAATGTTTCTGGACAAGTTTTTTGGCCGGAGAAAGGAACTTGGCTTACTGATCGATGTGATTTGAATACATGTACTTGGTTTGTTGGAGACAATGGCATTTCCTTACGTCTTGGAAATATCAAATCTCTTGAGTTAATATACCCTTGGAAGTGA

Coding sequence (CDS)

ATGAAGCCTCTAAACATGTTTTGTTTGATCATACTGTTTGCTTTTGTATCAAACATGAATATCAAGCCATGTTTTGCACAATCCAAGTATCAAACACGATTGTCGCAATGGAAAGTGAGCCTTGTGAATCAGATGAAGGATTCAACACTGGTCGTTCACTGCAAATCGAAGGACGACGATTTGGGCGAGCATGTGGTCACGGTCGGAACCAAATACTATTGGGAGTTCAGTGAAAATCTATGGCACACAACGTTGTATTGGTGCAATTTTAGCAGCAAATTTGGGAATGTTTCTGGACAAGTTTTTTGGCCGGAGAAAGGAACTTGGCTTACTGATCGATGTGATTTGAATACATGTACTTGGTTTGTTGGAGACAATGGCATTTCCTTACGTCTTGGAAATATCAAATCTCTTGAGTTAATATACCCTTGGAAGTGA

Protein sequence

MKPLNMFCLIILFAFVSNMNIKPCFAQSKYQTRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNIKSLELIYPWK

Homology

[Close]

BLAST of Sed0017292 vs. NCBI nr
Match: XP_022954425.1 (S-protein homolog 74-like [Cucurbita moschata])

HSP 1 Score: 184.9 bits (468), Expect = 5.0e-43
Identity = 82/129 (63.57%), Postives = 95/129 (73.64%), Query Frame = 0


Query: 19  MNIKPCFAQSKYQ--TRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEF 78
           M I  CFAQS      + S W+V +VN +KDSTLVVHCKSKDDDLGEHV+  G KY+W+F
Sbjct: 1   MIINSCFAQSDSSLIDQFSNWEVDIVNDLKDSTLVVHCKSKDDDLGEHVIKAGDKYFWKF 60

Query: 79  SENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNIK 138
            EN+  TTLYWCNFSSK G  SGQVFWPEK  WL+DRC+ NTC W   D+GIS+RLG   
Sbjct: 61  HENVLQTTLYWCNFSSKRGQASGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRLGAFG 120

Query: 139 SLELIYPWK 146
             EL+YPWK
Sbjct: 121 LYELVYPWK 129

[Close]

BLAST of Sed0017292 vs. NCBI nr
Match: XP_022954429.1 (S-protein homolog 74-like [Cucurbita moschata])

HSP 1 Score: 182.2 bits (461), Expect = 3.2e-42
Identity = 81/129 (62.79%), Postives = 94/129 (72.87%), Query Frame = 0


Query: 19  MNIKPCFAQSKYQ--TRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEF 78
           M I  CFAQS      + S W+V +VN +KDSTLV HCKSKDDDLGEHV+  G KY+W+F
Sbjct: 1   MIINSCFAQSDSSLIDQFSNWEVDIVNDLKDSTLVAHCKSKDDDLGEHVIKPGDKYFWKF 60

Query: 79  SENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNIK 138
            EN+  TTLYWCNFSSK G  SGQVFWPEK  WL+DRC+ NTC W   D+GIS+RLG   
Sbjct: 61  HENVLQTTLYWCNFSSKRGQASGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRLGVFG 120

Query: 139 SLELIYPWK 146
             EL+YPWK
Sbjct: 121 LYELVYPWK 129

[Close]

BLAST of Sed0017292 vs. NCBI nr
Match: XP_022954427.1 (S-protein homolog 74-like [Cucurbita moschata])

HSP 1 Score: 179.9 bits (455), Expect = 1.6e-41
Identity = 80/129 (62.02%), Postives = 93/129 (72.09%), Query Frame = 0


Query: 19  MNIKPCFAQSKYQ--TRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEF 78
           M I  CFAQS      + S W+V +VN +KDSTLV HCKSKDDDLGEHV+  G KY+W+F
Sbjct: 1   MIINSCFAQSDSSLIDQFSNWEVDIVNDLKDSTLVAHCKSKDDDLGEHVIKPGDKYFWKF 60

Query: 79  SENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNIK 138
            EN+  TTLYWCNFSSK G   GQVFWPEK  WL+DRC+ NTC W   D+GIS+RLG   
Sbjct: 61  HENVLQTTLYWCNFSSKGGQAFGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRLGVFG 120

Query: 139 SLELIYPWK 146
             EL+YPWK
Sbjct: 121 LYELVYPWK 129

[Close]

BLAST of Sed0017292 vs. NCBI nr
Match: XP_023542206.1 (S-protein homolog 74-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 179.5 bits (454), Expect = 2.1e-41
Identity = 74/113 (65.49%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 33  RLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSS 92
           + S W+V +VN +KDSTLV HCKSK DDLGEHV+  G KYYW+F EN+W TTLYWCNFSS
Sbjct: 49  QFSNWEVDIVNDLKDSTLVAHCKSKSDDLGEHVIKPGDKYYWKFHENVWQTTLYWCNFSS 108

Query: 93  KFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNIKSLELIYPWK 146
           K G  SGQVFWPEK  WL+DRC+ NTC W   D+GIS+R+G     EL+YPWK
Sbjct: 109 KRGQASGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRIGVFGLYELVYPWK 161

[Close]

BLAST of Sed0017292 vs. NCBI nr
Match: XP_023001658.1 (S-protein homolog 74-like [Cucurbita maxima])

HSP 1 Score: 172.6 bits (436), Expect = 2.6e-39
Identity = 77/148 (52.03%), Postives = 102/148 (68.92%), Query Frame = 0


Query: 1   MKPLNMFCLIILFAFVSNMNIKPCFAQ---SKYQTRLSQWKVSLVNQMKDSTLVVHCKSK 60
           M+ +N  C I+L    SNM +KPCFAQ   SK Q   S+W+V++ N M DSTL+VHCKSK
Sbjct: 1   MESVNPLCFILLLGLGSNMLMKPCFAQPTESKVQLPFSRWQVTIYNHMIDSTLMVHCKSK 60

Query: 61  DDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLN 120
           D+DLG H +  G  Y+ +F EN+W TT +WC+FSSK+G V+G VFWPE+G+ L+D C+ +
Sbjct: 61  DNDLGRHEIKQGDNYFLKFKENIWQTTQFWCHFSSKYGQVTGDVFWPEEGSRLSDECNDH 120

Query: 121 TCTWFVGDNGISLRLGNIKSLELIYPWK 146
            C W   D GI L  G+I S +L YPWK
Sbjct: 121 NCVWSAQDGGIFLLRGSINSYQLAYPWK 148

[Close]

BLAST of Sed0017292 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 7.1e-16
Identity = 40/114 (35.09%), Postives = 65/114 (57.02%), Query Frame = 0


Query: 33  RLSQWKVSLVNQM-KDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFS 92
           ++S+W+V++ N +    TL +HCKSK++DLG+  +    ++ W F EN+ H+TL+WC  S
Sbjct: 37  KISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMS 96

Query: 93  SKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNIKSLELIYPWK 146
              G+++ +VFW +    L  RCD   C W   ++G+ L    I    L   WK
Sbjct: 97  KDDGHMNVKVFWDD--VILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKWK 148

[Close]

BLAST of Sed0017292 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-14
Identity = 36/99 (36.36%), Postives = 58/99 (58.59%), Query Frame = 0


Query: 33  RLSQWKVSLVNQM-KDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFS 92
           ++S+W+V++VN +    TL +HCKSK+DDLGE  +    ++ W F EN+ H+T +WC  +
Sbjct: 37  KISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMN 96

Query: 93  SKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISL 131
              G+++  VFW +    L  RC    C W    +G+ L
Sbjct: 97  KDNGHMNVNVFWDD--VILFHRCGWKNCIWTAKTDGLYL 133

[Close]

BLAST of Sed0017292 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.2e-11
Identity = 31/96 (32.29%), Postives = 49/96 (51.04%), Query Frame = 0


Query: 49  TLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGT 108
           TL+ HCKSKDDDLG   +  G  + + F    +  TLY+C+FS    + S  ++   + +
Sbjct: 61  TLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDHRDS 120

Query: 109 WLTDRCDLNTCTWFVGDNGISLRLGNIKSLELIYPW 145
              ++C+ + C W +  NG        K  +L YPW
Sbjct: 121 GGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of Sed0017292 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.7e-09
Identity = 41/145 (28.28%), Postives = 67/145 (46.21%), Query Frame = 0


Query: 1   MKPLNMFCLIILFAFVSNMNIKPCFAQSKYQTRLSQWKVSLVNQMKDSTLVVHCKSKDDD 60
           M+ +++ C      F S     P F ++          V++ N +    L +HCKSK DD
Sbjct: 1   MEKVSIVCFFFFLLFGSGYGGLPPFWRATV--------VTMTNLIGGPPLTIHCKSKQDD 60

Query: 61  LGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCT 120
           LG HVV    +Y+++F  NLW +TL++C+F       S  ++  ++   + D      C 
Sbjct: 61  LGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQFKSFDIYDAQRDQGICD-----DCQ 120

Query: 121 WFVGDNGISLRLGNIKSLELIYPWK 146
           W +  +G   RLG        +PWK
Sbjct: 121 WEIKPDG-PCRLGKKAK---CFPWK 128

[Close]

BLAST of Sed0017292 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 1.7e-09
Identity = 40/99 (40.40%), Postives = 50/99 (50.51%), Query Frame = 0


Query: 47  DSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEK 106
           D  L VHCKS+DDD G H++  G  Y W F  N  ++TLY+C FS +   V   VF   K
Sbjct: 41  DYLLGVHCKSRDDDHGFHILQKGGLYGWMFYVNFMNSTLYFCGFSQE--QVKKGVFDIYK 100

Query: 107 GTWLTDRCDLNTCTWFVGDNGISLRLGNI-KSLELIYPW 145
               + RC    CTW   ++GI    G I K   L Y W
Sbjct: 101 AVRDSSRC--RNCTWEAKEDGI-YGYGEIPKKNPLFYKW 134

[Close]

BLAST of Sed0017292 vs. ExPASy TrEMBL
Match: A0A6J1GSD6 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456683 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.4e-43
Identity = 82/129 (63.57%), Postives = 95/129 (73.64%), Query Frame = 0


Query: 19  MNIKPCFAQSKYQ--TRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEF 78
           M I  CFAQS      + S W+V +VN +KDSTLVVHCKSKDDDLGEHV+  G KY+W+F
Sbjct: 1   MIINSCFAQSDSSLIDQFSNWEVDIVNDLKDSTLVVHCKSKDDDLGEHVIKAGDKYFWKF 60

Query: 79  SENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNIK 138
            EN+  TTLYWCNFSSK G  SGQVFWPEK  WL+DRC+ NTC W   D+GIS+RLG   
Sbjct: 61  HENVLQTTLYWCNFSSKRGQASGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRLGAFG 120

Query: 139 SLELIYPWK 146
             EL+YPWK
Sbjct: 121 LYELVYPWK 129

[Close]

BLAST of Sed0017292 vs. ExPASy TrEMBL
Match: A0A6J1GSZ3 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456688 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.6e-42
Identity = 81/129 (62.79%), Postives = 94/129 (72.87%), Query Frame = 0


Query: 19  MNIKPCFAQSKYQ--TRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEF 78
           M I  CFAQS      + S W+V +VN +KDSTLV HCKSKDDDLGEHV+  G KY+W+F
Sbjct: 1   MIINSCFAQSDSSLIDQFSNWEVDIVNDLKDSTLVAHCKSKDDDLGEHVIKPGDKYFWKF 60

Query: 79  SENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNIK 138
            EN+  TTLYWCNFSSK G  SGQVFWPEK  WL+DRC+ NTC W   D+GIS+RLG   
Sbjct: 61  HENVLQTTLYWCNFSSKRGQASGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRLGVFG 120

Query: 139 SLELIYPWK 146
             EL+YPWK
Sbjct: 121 LYELVYPWK 129

[Close]

BLAST of Sed0017292 vs. ExPASy TrEMBL
Match: A0A6J1GQZ0 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456686 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 7.8e-42
Identity = 80/129 (62.02%), Postives = 93/129 (72.09%), Query Frame = 0


Query: 19  MNIKPCFAQSKYQ--TRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEF 78
           M I  CFAQS      + S W+V +VN +KDSTLV HCKSKDDDLGEHV+  G KY+W+F
Sbjct: 1   MIINSCFAQSDSSLIDQFSNWEVDIVNDLKDSTLVAHCKSKDDDLGEHVIKPGDKYFWKF 60

Query: 79  SENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNIK 138
            EN+  TTLYWCNFSSK G   GQVFWPEK  WL+DRC+ NTC W   D+GIS+RLG   
Sbjct: 61  HENVLQTTLYWCNFSSKGGQAFGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRLGVFG 120

Query: 139 SLELIYPWK 146
             EL+YPWK
Sbjct: 121 LYELVYPWK 129

[Close]

BLAST of Sed0017292 vs. ExPASy TrEMBL
Match: A0A6J1KR58 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111495733 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.2e-39
Identity = 77/148 (52.03%), Postives = 102/148 (68.92%), Query Frame = 0


Query: 1   MKPLNMFCLIILFAFVSNMNIKPCFAQ---SKYQTRLSQWKVSLVNQMKDSTLVVHCKSK 60
           M+ +N  C I+L    SNM +KPCFAQ   SK Q   S+W+V++ N M DSTL+VHCKSK
Sbjct: 1   MESVNPLCFILLLGLGSNMLMKPCFAQPTESKVQLPFSRWQVTIYNHMIDSTLMVHCKSK 60

Query: 61  DDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLN 120
           D+DLG H +  G  Y+ +F EN+W TT +WC+FSSK+G V+G VFWPE+G+ L+D C+ +
Sbjct: 61  DNDLGRHEIKQGDNYFLKFKENIWQTTQFWCHFSSKYGQVTGDVFWPEEGSRLSDECNDH 120

Query: 121 TCTWFVGDNGISLRLGNIKSLELIYPWK 146
            C W   D GI L  G+I S +L YPWK
Sbjct: 121 NCVWSAQDGGIFLLRGSINSYQLAYPWK 148

[Close]

BLAST of Sed0017292 vs. ExPASy TrEMBL
Match: A0A1S3C8Z6 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103498000 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 4.3e-32
Identity = 69/146 (47.26%), Postives = 93/146 (63.70%), Query Frame = 0


Query: 1   MKPLNMFCLIIL-FAFVSNMNIKPCFAQSKYQTRLSQWKVSLVNQMKDSTLVVHCKSKDD 60
           M+ L  F L+IL  AF   ++   C   SKYQ  L+ W+V+++N   +++L VHCKSKDD
Sbjct: 1   MEALKSFALLILVLAFAWKVDQCYCGGDSKYQLPLTDWQVTIINYQINASLEVHCKSKDD 60

Query: 61  DLGEHVV-TVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNT 120
           DLG HV+   G +Y W F EN   TT +WCNF S+ G+ S +VFWPE GTWL+DRC  + 
Sbjct: 61  DLGVHVIQNEGERYSWGFKENWLQTTKFWCNFQSRLGHASFEVFWPETGTWLSDRCSNSN 120

Query: 121 CTWFVGDNGISLRLGNIKSLELIYPW 145
           C W   ++G SL  G  K+LE  +PW
Sbjct: 121 CVWVASNDGFSLLNGPAKTLEFQHPW 146

[Close]

BLAST of Sed0017292 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 85.1 bits (209), Expect = 5.0e-17
Identity = 40/114 (35.09%), Postives = 65/114 (57.02%), Query Frame = 0


Query: 33  RLSQWKVSLVNQM-KDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFS 92
           ++S+W+V++ N +    TL +HCKSK++DLG+  +    ++ W F EN+ H+TL+WC  S
Sbjct: 37  KISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMS 96

Query: 93  SKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNIKSLELIYPWK 146
              G+++ +VFW +    L  RCD   C W   ++G+ L    I    L   WK
Sbjct: 97  KDDGHMNVKVFWDD--VILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKWK 148

[Close]

BLAST of Sed0017292 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 80.9 bits (198), Expect = 9.5e-16
Identity = 36/99 (36.36%), Postives = 58/99 (58.59%), Query Frame = 0


Query: 33  RLSQWKVSLVNQM-KDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFS 92
           ++S+W+V++VN +    TL +HCKSK+DDLGE  +    ++ W F EN+ H+T +WC  +
Sbjct: 37  KISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMN 96

Query: 93  SKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISL 131
              G+++  VFW +    L  RC    C W    +G+ L
Sbjct: 97  KDNGHMNVNVFWDD--VILFHRCGWKNCIWTAKTDGLYL 133

[Close]

BLAST of Sed0017292 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 68.9 bits (167), Expect = 3.7e-12
Identity = 31/96 (32.29%), Postives = 49/96 (51.04%), Query Frame = 0


Query: 49  TLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGT 108
           TL+ HCKSKDDDLG   +  G  + + F    +  TLY+C+FS    + S  ++   + +
Sbjct: 61  TLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDHRDS 120

Query: 109 WLTDRCDLNTCTWFVGDNGISLRLGNIKSLELIYPW 145
              ++C+ + C W +  NG        K  +L YPW
Sbjct: 121 GGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of Sed0017292 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-11
Identity = 39/121 (32.23%), Postives = 61/121 (50.41%), Query Frame = 0


Query: 15  FVSNMNIKPCFAQSKYQTRLSQWKVSLVNQMKDSTLV-VHCKSKDDDLGEHVVTVGTKYY 74
           F+ ++ I  C   S     + + KV L NQ++ S L+ VHC+SKDDDLGEH++ +G  Y 
Sbjct: 5   FIFSIVIGLCIGVSNAFHEIGESKVVLSNQLEHSKLLKVHCRSKDDDLGEHILKIGQDYE 64

Query: 75  WEFSENLWHTTLYWC------NFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNG 129
           + F +N+W TT + C      NF      V+ +  W         +    +C W   ++G
Sbjct: 65  FTFGDNIWQTTSFSCQMDQGPNFKHHLDFVAYETSW--------SKALEASCKWIGREDG 117

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BLAST of Sed0017292 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 63.9 bits (154), Expect = 1.2e-10
Identity = 41/145 (28.28%), Postives = 67/145 (46.21%), Query Frame = 0


Query: 1   MKPLNMFCLIILFAFVSNMNIKPCFAQSKYQTRLSQWKVSLVNQMKDSTLVVHCKSKDDD 60
           M+ +++ C      F S     P F ++          V++ N +    L +HCKSK DD
Sbjct: 1   MEKVSIVCFFFFLLFGSGYGGLPPFWRATV--------VTMTNLIGGPPLTIHCKSKQDD 60

Query: 61  LGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCT 120
           LG HVV    +Y+++F  NLW +TL++C+F       S  ++  ++   + D      C 
Sbjct: 61  LGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQFKSFDIYDAQRDQGICD-----DCQ 120

Query: 121 WFVGDNGISLRLGNIKSLELIYPWK 146
           W +  +G   RLG        +PWK
Sbjct: 121 WEIKPDG-PCRLGKKAK---CFPWK 128

The following BLAST results are available for this feature:

BLAST of Sed0017292 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954425.1	5.0e-43	63.57	S-protein homolog 74-like [Cucurbita moschata]	[more]
XP_022954429.1	3.2e-42	62.79	S-protein homolog 74-like [Cucurbita moschata]	[more]
XP_022954427.1	1.6e-41	62.02	S-protein homolog 74-like [Cucurbita moschata]	[more]
XP_023542206.1	2.1e-41	65.49	S-protein homolog 74-like [Cucurbita pepo subsp. pepo]	[more]
XP_023001658.1	2.6e-39	52.03	S-protein homolog 74-like [Cucurbita maxima]	[more]

BLAST of Sed0017292 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2HQ46	7.1e-16	35.09	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
F4JLS0	1.3e-14	36.36	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
F4JLQ5	5.2e-11	32.29	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
O23020	1.7e-09	28.28	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]
F2Q9V4	1.7e-09	40.40	S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2	[more]

BLAST of Sed0017292 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GSD6	2.4e-43	63.57	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456683 PE=3 SV=1	[more]
A0A6J1GSZ3	1.6e-42	62.79	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456688 PE=3 SV=1	[more]
A0A6J1GQZ0	7.8e-42	62.02	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456686 PE=3 SV=1	[more]
A0A6J1KR58	1.2e-39	52.03	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111495733 PE=3 SV=1	[more]
A0A1S3C8Z6	4.3e-32	47.26	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103498000 PE=3 SV=1	[more]

BLAST of Sed0017292 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29035.1	5.0e-17	35.09	Plant self-incompatibility protein S1 family	[more]
AT4G16295.1	9.5e-16	36.36	S-protein homologue 1	[more]
AT4G16195.1	3.7e-12	32.29	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	1.1e-11	32.23	Plant self-incompatibility protein S1 family	[more]
AT1G04645.1	1.2e-10	28.28	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 39..144 e-value: 1.9E-20 score: 73.4
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 30..130
None	No IPR available	PANTHER	PTHR31232:SF34	PUTATIVE-RELATED	coord: 30..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017292.1	Sed0017292.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process