Sed0017261 (gene) Chayote v1

Overview


Name	Sed0017261
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Proliferating cell nuclear antigen
Location	LG04: 40528310 .. 40529644 (-)
RNA-Seq Expression	Sed0017261
Synteny	Sed0017261

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGAGCTCCGTCTGGTTCAGGGGGGTCTTCTGAAGAAGGTTCTCGAAGCCATGAAGGATCTCGTCAACGACGCCAACTTCGATTGTTCCCCTTCCGGCTTCTCCCTCCAGGCCATGGACTCCTCCCACGTCGCCCTCCTCTCTCTCCTTCTCCGCTCCGAGGGCTTCCAGCACTTCCGCTGCGATCGCAACCTCTCCATGGGAATCAACCTCAACAACATGGCTAAGATGCTCCGATGCGCCGCCATCGACGACATTGTCACGCTCAAGGCCGACGATGGCACCCATTGCCTCACCTTCATGTTCCAAAACCCTTGTGAGTAGTCATCTCTCTGAAGTTTTGTTCATTCTGATTGCTGAGATACAATGTAGCTGTTTGGATTGGACTGATTGTTGTTCTGTTCTGTTGGTTGTTTAGCGCAAGATAAGATTGCTGATTTTGAGATGAAGTTGATGGACATTGACAGCGAGCATCTCGGAATCCCTGATGCTCAATATCAGTCCATTGTTAGAATGCCAGCCGCTGAGTTTGCCAGGATTTGCAGGGATCTCAGCACCATTGGCGATACTGGTCATTGTTTGACTCATTTCATTTCTTTTTTAGGAAATCTTTGCTCTAATGAATAACCCATTTGTTTCAGTTCTGATTTCTGTATCCAAGGAAGGAGTTCAATTCTCAACCAGAGGTGACATTGGCATTGCCAATATCGTTTGTAGACGTAATGCCATAGTTGACAAGGTTTTTTCATCAATCCTTCACTGTTGAATCTCTCAATGTTATGGGCTTTGCTCTATGGTTTATCGATGTCGAGTAATGTTTTGACGGTATATTTCTTCACTTTACAGCCTGAAGAAGCCGTCATAATAGAAATGGAAGAACCTGTTAGCTTAACCTTTGCCCTGAGGTACCTAAACTCCTTTACAAAGGCAACCCCTCTTGCAAACCAGGTGACCATTAGCATGTCTTCAGACCTGCCCCTCGTGGTCGAATACAGAATTGAAGATATGGGTTATATAAGATATTACTTGGCTCCTAAGATCGAAGAAGAAGATGAAGCTGCAGCTCAGGAGATTAGCAGACCTCAGGCATCGTCCAAGAACACTGCAAAAGCTGAACCTAAACCAGACGAGATGAAGATTAATGAAGACAGGGAAGCTGTAATTGAGATCAAGGATGAAGGCAATAAGTCTGTAACTGAAGTCAAGGATGAGGAAAGCAAGTCTGTAGCAGAAATCAAGGACGACGAGAAGATCTCGCCTGTCGAAAGTAAGGCCGAGGAGGTAACCAATACTCCCAAGGAACCCAAGATCGAAACGATGGATCTTGAGTGA

mRNA sequence

ATGTTGGAGCTCCGTCTGGTTCAGGGGGGTCTTCTGAAGAAGGTTCTCGAAGCCATGAAGGATCTCGTCAACGACGCCAACTTCGATTGTTCCCCTTCCGGCTTCTCCCTCCAGGCCATGGACTCCTCCCACGTCGCCCTCCTCTCTCTCCTTCTCCGCTCCGAGGGCTTCCAGCACTTCCGCTGCGATCGCAACCTCTCCATGGGAATCAACCTCAACAACATGGCTAAGATGCTCCGATGCGCCGCCATCGACGACATTGTCACGCTCAAGGCCGACGATGGCACCCATTGCCTCACCTTCATGTTCCAAAACCCTTCGCAAGATAAGATTGCTGATTTTGAGATGAAGTTGATGGACATTGACAGCGAGCATCTCGGAATCCCTGATGCTCAATATCAGTCCATTGTTAGAATGCCAGCCGCTGAGTTTGCCAGGATTTGCAGGGATCTCAGCACCATTGGCGATACTGTTCTGATTTCTGTATCCAAGGAAGGAGTTCAATTCTCAACCAGAGGTGACATTGGCATTGCCAATATCGTTTGTAGACGTAATGCCATAGTTGACAAGCCTGAAGAAGCCGTCATAATAGAAATGGAAGAACCTGTTAGCTTAACCTTTGCCCTGAGGTACCTAAACTCCTTTACAAAGGCAACCCCTCTTGCAAACCAGGTGACCATTAGCATGTCTTCAGACCTGCCCCTCGTGGTCGAATACAGAATTGAAGATATGGGTTATATAAGATATTACTTGGCTCCTAAGATCGAAGAAGAAGATGAAGCTGCAGCTCAGGAGATTAGCAGACCTCAGGCATCGTCCAAGAACACTGCAAAAGCTGAACCTAAACCAGACGAGATGAAGATTAATGAAGACAGGGAAGCTGTAATTGAGATCAAGGATGAAGGCAATAAGTCTGTAACTGAAGTCAAGGATGAGGAAAGCAAGTCTGTAGCAGAAATCAAGGACGACGAGAAGATCTCGCCTGTCGAAAGTAAGGCCGAGGAGGTAACCAATACTCCCAAGGAACCCAAGATCGAAACGATGGATCTTGAGTGA

Coding sequence (CDS)

ATGTTGGAGCTCCGTCTGGTTCAGGGGGGTCTTCTGAAGAAGGTTCTCGAAGCCATGAAGGATCTCGTCAACGACGCCAACTTCGATTGTTCCCCTTCCGGCTTCTCCCTCCAGGCCATGGACTCCTCCCACGTCGCCCTCCTCTCTCTCCTTCTCCGCTCCGAGGGCTTCCAGCACTTCCGCTGCGATCGCAACCTCTCCATGGGAATCAACCTCAACAACATGGCTAAGATGCTCCGATGCGCCGCCATCGACGACATTGTCACGCTCAAGGCCGACGATGGCACCCATTGCCTCACCTTCATGTTCCAAAACCCTTCGCAAGATAAGATTGCTGATTTTGAGATGAAGTTGATGGACATTGACAGCGAGCATCTCGGAATCCCTGATGCTCAATATCAGTCCATTGTTAGAATGCCAGCCGCTGAGTTTGCCAGGATTTGCAGGGATCTCAGCACCATTGGCGATACTGTTCTGATTTCTGTATCCAAGGAAGGAGTTCAATTCTCAACCAGAGGTGACATTGGCATTGCCAATATCGTTTGTAGACGTAATGCCATAGTTGACAAGCCTGAAGAAGCCGTCATAATAGAAATGGAAGAACCTGTTAGCTTAACCTTTGCCCTGAGGTACCTAAACTCCTTTACAAAGGCAACCCCTCTTGCAAACCAGGTGACCATTAGCATGTCTTCAGACCTGCCCCTCGTGGTCGAATACAGAATTGAAGATATGGGTTATATAAGATATTACTTGGCTCCTAAGATCGAAGAAGAAGATGAAGCTGCAGCTCAGGAGATTAGCAGACCTCAGGCATCGTCCAAGAACACTGCAAAAGCTGAACCTAAACCAGACGAGATGAAGATTAATGAAGACAGGGAAGCTGTAATTGAGATCAAGGATGAAGGCAATAAGTCTGTAACTGAAGTCAAGGATGAGGAAAGCAAGTCTGTAGCAGAAATCAAGGACGACGAGAAGATCTCGCCTGTCGAAAGTAAGGCCGAGGAGGTAACCAATACTCCCAAGGAACCCAAGATCGAAACGATGGATCTTGAGTGA

Protein sequence

MLELRLVQGGLLKKVLEAMKDLVNDANFDCSPSGFSLQAMDSSHVALLSLLLRSEGFQHFRCDRNLSMGINLNNMAKMLRCAAIDDIVTLKADDGTHCLTFMFQNPSQDKIADFEMKLMDIDSEHLGIPDAQYQSIVRMPAAEFARICRDLSTIGDTVLISVSKEGVQFSTRGDIGIANIVCRRNAIVDKPEEAVIIEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLPLVVEYRIEDMGYIRYYLAPKIEEEDEAAAQEISRPQASSKNTAKAEPKPDEMKINEDREAVIEIKDEGNKSVTEVKDEESKSVAEIKDDEKISPVESKAEEVTNTPKEPKIETMDLE

Homology

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BLAST of Sed0017261 vs. NCBI nr
Match: XP_038891866.1 (proliferating cell nuclear antigen-like [Benincasa hispida])

HSP 1 Score: 539.7 bits (1389), Expect = 1.9e-149
Identity = 287/356 (80.62%), Postives = 322/356 (90.45%), Query Frame = 0


Query: 1   MLELRLVQGGLLKKVLEAMKDLVNDANFDCSPSGFSLQAMDSSHVALLSLLLRSEGFQHF 60
           MLE RLVQG LLKKVLEAMKDLVNDANFDCS +GFSLQAMDSSHVAL+SLLLRSEGF+H+
Sbjct: 1   MLEFRLVQGSLLKKVLEAMKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 60

Query: 61  RCDRNLSMGINLNNMAKMLRCAAIDDIVTLKADDGTHCLTFMFQNPSQDKIADFEMKLMD 120
           RCDR++SMG+NLNNMAKMLRCA  DDIVTLKADDG+ C+TFMF+NPSQDKIADFEMKLMD
Sbjct: 61  RCDRSISMGMNLNNMAKMLRCAGNDDIVTLKADDGSDCVTFMFENPSQDKIADFEMKLMD 120

Query: 121 IDSEHLGIPDAQYQSIVRMPAAEFARICRDLSTIGDTVLISVSKEGVQFSTRGDIGIANI 180
           IDSEHLGIPDA+YQSIVRMPAAEFARIC+DLS+IGDTVLISVSKEGVQFSTRGDIG ANI
Sbjct: 121 IDSEHLGIPDAEYQSIVRMPAAEFARICKDLSSIGDTVLISVSKEGVQFSTRGDIGTANI 180

Query: 181 VCRRNAIVDKPEEAVIIEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLPLVVEYR 240
           VCRRN  VDKPEEAVIIEMEEPVSLTFALRYLNSFTKA+PLANQVTISMSSDLP+VVEYR
Sbjct: 181 VCRRNTTVDKPEEAVIIEMEEPVSLTFALRYLNSFTKASPLANQVTISMSSDLPVVVEYR 240

Query: 241 IEDMGYIRYYLAPKIEEEDE----AAAQEISRPQASSKNTAKAEPKPD-EMKINEDREAV 300
           IEDMGYIRYYLAPKIEEEDE    AAAQ I+RP+   K+TAKA+PK D + K+  + E+ 
Sbjct: 241 IEDMGYIRYYLAPKIEEEDEAAAAAAAQAINRPETEPKHTAKAKPKADLKPKVEPNPESE 300

Query: 301 IEIKDEGNKSVTEVKDEESKSVAEIKDDEKISPVESKAEEVTNTPKEPKIETMDLE 352
           ++ ++E N SV E+KDE++K+V  I D+EK SP++SKAEE  NTPKEPKIETM+LE
Sbjct: 301 MKFEEE-NGSVIEIKDEDNKTVFVINDEEKNSPLKSKAEEENNTPKEPKIETMELE 355

[Close]

BLAST of Sed0017261 vs. NCBI nr
Match: XP_016902995.1 (PREDICTED: proliferating cell nuclear antigen-like isoform X1 [Cucumis melo] >KAA0037336.1 proliferating cell nuclear antigen-like isoform X1 [Cucumis melo var. makuwa] >TYJ97571.1 proliferating cell nuclear antigen-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 535.4 bits (1378), Expect = 3.6e-148
Identity = 288/353 (81.59%), Postives = 318/353 (90.08%), Query Frame = 0


Query: 1   MLELRLVQGGLLKKVLEAMKDLVNDANFDCSPSGFSLQAMDSSHVALLSLLLRSEGFQHF 60
           MLELRL+QG LLKKVLEAMKDLVNDANFDCSP+GFSLQAMDSSHVAL+SLLLRSE F+H+
Sbjct: 1   MLELRLLQGSLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSECFEHY 60

Query: 61  RCDRNLSMGINLNNMAKMLRCAAIDDIVTLKADDGTHCLTFMFQNPSQDKIADFEMKLMD 120
           RCDR +SMG+NLNNMAKMLRCA  DDIVTLKADDG+  LTFMF+NPSQDKIADFEMKLMD
Sbjct: 61  RCDRTISMGMNLNNMAKMLRCAGNDDIVTLKADDGSDSLTFMFENPSQDKIADFEMKLMD 120

Query: 121 IDSEHLGIPDAQYQSIVRMPAAEFARICRDLSTIGDTVLISVSKEGVQFSTRGDIGIANI 180
           IDSEHLGIPDA+YQSIV+MPA EFARIC+DLS+IGDTVLISVSKEGVQFSTRGDIG ANI
Sbjct: 121 IDSEHLGIPDAEYQSIVKMPAVEFARICKDLSSIGDTVLISVSKEGVQFSTRGDIGTANI 180

Query: 181 VCRRNAIVDKPEEAVIIEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLPLVVEYR 240
           VCRRN  VDKPEEAV+IEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLP+VVEYR
Sbjct: 181 VCRRNTTVDKPEEAVMIEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLPVVVEYR 240

Query: 241 IEDMGYIRYYLAPKIEEEDEAAAQEISRPQASSKNTAKAEPKPD-EMKINEDREAVIEIK 300
           IEDMGYIRYYLAPKIEEEDEAAA  IS+P+  SK+TAKA+PK D + K     E+  E+K
Sbjct: 241 IEDMGYIRYYLAPKIEEEDEAAA--ISKPETESKHTAKAKPKADLKPKFEAHPESESEMK 300

Query: 301 DEGNK-SVTEVKDEESKSVAEIKDDEKISPVESKAEEVTNTPKEPKIETMDLE 352
            E +K SV E+KD+++KSV  I D+EK S V+SKA+E TNTPKEPKIETMDLE
Sbjct: 301 SEEDKGSVIEIKDKDNKSVFVINDEEKNSSVKSKAQEETNTPKEPKIETMDLE 351

[Close]

BLAST of Sed0017261 vs. NCBI nr
Match: XP_022156894.1 (proliferating cell nuclear antigen-like [Momordica charantia])

HSP 1 Score: 532.3 bits (1370), Expect = 3.1e-147
Identity = 287/355 (80.85%), Postives = 319/355 (89.86%), Query Frame = 0


Query: 1   MLELRLVQGGLLKKVLEAMKDLVNDANFDCSPSGFSLQAMDSSHVALLSLLLRSEGFQHF 60
           MLELRLVQG LLKKVLEAMKDLVNDANFDCS +GFSLQAMDSSHVAL+SLLLRS+GF+H+
Sbjct: 1   MLELRLVQGSLLKKVLEAMKDLVNDANFDCSATGFSLQAMDSSHVALVSLLLRSDGFEHY 60

Query: 61  RCDRNLSMGINLNNMAKMLRCAAIDDIVTLKADDGTHCLTFMFQNPSQDKIADFEMKLMD 120
           RCDRN+S+G+NL NMAKMLRCA  DDIVTLKADDG+ C+TFMF+NPSQDKIADFEMKLMD
Sbjct: 61  RCDRNISIGMNLGNMAKMLRCAGNDDIVTLKADDGSDCITFMFENPSQDKIADFEMKLMD 120

Query: 121 IDSEHLGIPDAQYQSIVRMPAAEFARICRDLSTIGDTVLISVSKEGVQFSTRGDIGIANI 180
           IDSEHLGIPDA YQSIVRMPAAEFARIC+DLS+IGDTVLISVSKEGVQFSTRGDIGIANI
Sbjct: 121 IDSEHLGIPDADYQSIVRMPAAEFARICKDLSSIGDTVLISVSKEGVQFSTRGDIGIANI 180

Query: 181 VCRRNAIVDKPEEAVIIEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLPLVVEYR 240
           VCRRN  VDKPEEAV+IEMEEPVSLTFALRYLNSFTKATPLA+QVTIS+SSDLP+V+EYR
Sbjct: 181 VCRRNTTVDKPEEAVVIEMEEPVSLTFALRYLNSFTKATPLASQVTISLSSDLPVVIEYR 240

Query: 241 IEDMGYIRYYLAPKIEEEDE--AAAQEISRPQASSKNTAKAEPKPDEMKINEDREAVIEI 300
           IEDMGYIRYYLAPKIEEEDE  AAA  ISRP+A  K+TA+A  +  E K   + ++  E+
Sbjct: 241 IEDMGYIRYYLAPKIEEEDEAAAAAAAISRPEAGPKHTAEAAKRKAESKPKFEPQSESEM 300

Query: 301 KDEGNK-SVTEVKDEESKSVAEIKDDE-KISPVESKAEEVTNTPKEPKIETMDLE 352
           K+E +K SV E+KDEE+KSV  IKD+E K S V SKAEE TNTPKEPKIETM+LE
Sbjct: 301 KNEEDKGSVIEIKDEENKSVVVIKDEEDKNSSVLSKAEEETNTPKEPKIETMELE 355

[Close]

BLAST of Sed0017261 vs. NCBI nr
Match: XP_004150242.1 (proliferating cell nuclear antigen [Cucumis sativus] >KGN50626.1 hypothetical protein Csa_021418 [Cucumis sativus])

HSP 1 Score: 518.1 bits (1333), Expect = 6.0e-143
Identity = 281/352 (79.83%), Postives = 312/352 (88.64%), Query Frame = 0


Query: 1   MLELRLVQGGLLKKVLEAMKDLVNDANFDCSPSGFSLQAMDSSHVALLSLLLRSEGFQHF 60
           MLELRLVQG LLKKVLEA+KDLVNDANFDCS SGFSLQAMDSSHVAL+SLLLRSE F+H+
Sbjct: 1   MLELRLVQGSLLKKVLEALKDLVNDANFDCSSSGFSLQAMDSSHVALVSLLLRSESFEHY 60

Query: 61  RCDRNLSMGINLNNMAKMLRCAAIDDIVTLKADDGTHCLTFMFQNPSQDKIADFEMKLMD 120
           RCDR +SMG+NLNNMAKMLRCA  DDIVTLKADDG+  +TFMF+NPSQDKIADFEMKLMD
Sbjct: 61  RCDRTMSMGMNLNNMAKMLRCAGNDDIVTLKADDGSDSVTFMFENPSQDKIADFEMKLMD 120

Query: 121 IDSEHLGIPDAQYQSIVRMPAAEFARICRDLSTIGDTVLISVSKEGVQFSTRGDIGIANI 180
           IDSEHLGIPDA+YQSIV+MPA EFARIC+DLS+IGDTVLISVSKEGVQFSTRGDIG ANI
Sbjct: 121 IDSEHLGIPDAEYQSIVKMPAVEFARICKDLSSIGDTVLISVSKEGVQFSTRGDIGTANI 180

Query: 181 VCRRNAIVDKPEEAVIIEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLPLVVEYR 240
           VCRRN  VDKPEEAV+IEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLP+VVEYR
Sbjct: 181 VCRRNTTVDKPEEAVMIEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLPVVVEYR 240

Query: 241 IEDMGYIRYYLAPKIEEEDEAAAQEISRPQASSKNTAKAEPKPDEMKINEDREAVIEIKD 300
           IE MGYIRYYLAPKIEEEDEAA   IS+P+   K+TAKA+PK D +K N +     E+K 
Sbjct: 241 IEGMGYIRYYLAPKIEEEDEAAT--ISKPETEPKHTAKAKPKAD-LKPNFEPNPESEMKS 300

Query: 301 EGNK-SVTEVKDEESKSVAEIKDDEKISPVESKAEEVTNTPKEPKIETMDLE 352
           E ++ SV E+KD++ KSV  I D+ + SPV+SKA E TNTPKEPKIETM+LE
Sbjct: 301 EEDEGSVIEIKDKD-KSVFVINDEVQNSPVKSKAREETNTPKEPKIETMELE 348

[Close]

BLAST of Sed0017261 vs. NCBI nr
Match: XP_022996079.1 (proliferating cell nuclear antigen-like [Cucurbita maxima])

HSP 1 Score: 513.5 bits (1321), Expect = 1.5e-141
Identity = 273/352 (77.56%), Postives = 301/352 (85.51%), Query Frame = 0


Query: 1   MLELRLVQGGLLKKVLEAMKDLVNDANFDCSPSGFSLQAMDSSHVALLSLLLRSEGFQHF 60
           MLELRL+QGGLLKKVLEAMKDLVNDANFDCSP+GFSLQAMDSSHVAL+SLLLRSEGF+H+
Sbjct: 24  MLELRLLQGGLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSEGFEHY 83

Query: 61  RCDRNLSMGINLNNMAKMLRCAAIDDIVTLKADDGTHCLTFMFQNPSQDKIADFEMKLMD 120
           RCDRN+SMG+NLNNMAKMLRCA  DDIVTLKADDG+ C+TFMF+NPSQDKIADFEMKLMD
Sbjct: 84  RCDRNVSMGMNLNNMAKMLRCAGNDDIVTLKADDGSDCITFMFENPSQDKIADFEMKLMD 143

Query: 121 IDSEHLGIPDAQYQSIVRMPAAEFARICRDLSTIGDTVLISVSKEGVQFSTRGDIGIANI 180
           IDSEHLGIPDA+YQSIVRMPAAEFARICRDLSTIGDTVLISVSKEGVQFSTRGD+G ANI
Sbjct: 144 IDSEHLGIPDAEYQSIVRMPAAEFARICRDLSTIGDTVLISVSKEGVQFSTRGDMGTANI 203

Query: 181 VCRRNAIVDKPEEAVIIEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLPLVVEYR 240
           VCRRN  VDKPEE VIIE+EEPVSLTFALRYLNSFTKATPLA QVTISMSSDLP+V+EYR
Sbjct: 204 VCRRNTTVDKPEEDVIIELEEPVSLTFALRYLNSFTKATPLATQVTISMSSDLPMVIEYR 263

Query: 241 IEDMGYIRYYLAPKIEEEDEAAAQEISRPQASSKNTAKAEPKPD-EMKINEDREAVIEIK 300
           IE MGYIRYYLAPKI+EE+EAAA+ I RP+   KNTAKA+PK D + K+    E+ ++I 
Sbjct: 264 IEGMGYIRYYLAPKIDEEEEAAAEAIRRPEIEPKNTAKAKPKADLKPKVKPKPESEMKI- 323

Query: 301 DEGNKSVTEVKDEESKSVAEIKDDEKISPVESKAEEVTNTPKEPKIETMDLE 352
                                 D++K S  E  AEE TNTPKEPKIETM+LE
Sbjct: 324 ----------------------DEDKESVNEFNAEEETNTPKEPKIETMELE 352

[Close]

BLAST of Sed0017261 vs. ExPASy Swiss-Prot
Match: Q00265 (Proliferating cell nuclear antigen large form OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 2.0e-120
Identity = 237/365 (64.93%), Postives = 287/365 (78.63%), Query Frame = 0


Query: 1   MLELRLVQGGLLKKVLEAMKDLVNDANFDCSPSGFSLQAMDSSHVALLSLLLRSEGFQHF 60
           MLELRLVQGGLLKKVLE++KDLVNDANFDCS SGFSLQAMDSSHVAL+++LLRSEGF+H+
Sbjct: 1   MLELRLVQGGLLKKVLESIKDLVNDANFDCSASGFSLQAMDSSHVALVAVLLRSEGFEHY 60

Query: 61  RCDRNLSMGINLNNMAKMLRCAAIDDIVTLKADDGTHCLTFMFQNPSQDKIADFEMKLMD 120
           RCDRN+SMG+NL NMAKMLRCA  DDIVT+KADD    +TFMF++P+QDKI+DFEMKLMD
Sbjct: 61  RCDRNISMGMNLGNMAKMLRCAGNDDIVTMKADDDGDVITFMFESPTQDKISDFEMKLMD 120

Query: 121 IDSEHLGIPDAQYQSIVRMPAAEFARICRDLSTIGDTVLISVSKEGVQFSTRGDIGIANI 180
           IDSEHLGIP+++Y++IVRMP+AEFARIC+DLSTIGDTV+ISV+KEGV+FSTRGDIG ANI
Sbjct: 121 IDSEHLGIPESEYEAIVRMPSAEFARICKDLSTIGDTVVISVTKEGVKFSTRGDIGTANI 180

Query: 181 VCRRNAIVDKPEEAVIIEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLPLVVEYR 240
           VCR+N  VDKPE+A IIEM+E VSLTFALRY+NSFTKATPLANQVTIS+SS+LP+VVEY+
Sbjct: 181 VCRQNTSVDKPEDATIIEMQETVSLTFALRYMNSFTKATPLANQVTISLSSELPVVVEYK 240

Query: 241 IEDMGYIRYYLAPKIEEEDEAA-----AQEISRPQASSKNTAKAE--PKPDEMK------ 300
           I +MGYIRYYLAPKIEEEDEAA     AQ  +    S+  T K E   K D  K      
Sbjct: 241 IAEMGYIRYYLAPKIEEEDEAANYAQPAQNSAAAATSNNGTKKNEGNNKVDSKKRAIKSE 300

Query: 301 INEDREAVIEIKDEGN-KSVTEVKDEESKSVAEIKDDEKISPVESKAEEVTNTPKEPKIE 352
             +D EA  + + +   K+ TE  +++   V + K   +    +   E    T    ++E
Sbjct: 301 FVDDSEAATDAQPQAKAKTKTEAGEDDDVEVMDTKPKNEPDDGDEVMETKPKTESNGEVE 360

[Close]

BLAST of Sed0017261 vs. ExPASy Swiss-Prot
Match: P24314 (Proliferating cell nuclear antigen OS=Catharanthus roseus OX=4058 PE=2 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 2.8e-119
Identity = 211/265 (79.62%), Postives = 246/265 (92.83%), Query Frame = 0


Query: 1   MLELRLVQGGLLKKVLEAMKDLVNDANFDCSPSGFSLQAMDSSHVALLSLLLRSEGFQHF 60
           MLELRLVQG LLKKVLE++KDLV DANFDCS SGFSLQAMDSSHVAL++LLLRSEGF+H+
Sbjct: 1   MLELRLVQGSLLKKVLESLKDLVTDANFDCSASGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRNLSMGINLNNMAKMLRCAAIDDIVTLKADDGTHCLTFMFQNPSQDKIADFEMKLMD 120
           RCDRN SMG+NLNNMAKML+CA  DDI+TLKADDG+  +TFMF++P+QDKI+DFEMKLMD
Sbjct: 61  RCDRNPSMGMNLNNMAKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKISDFEMKLMD 120

Query: 121 IDSEHLGIPDAQYQSIVRMPAAEFARICRDLSTIGDTVLISVSKEGVQFSTRGDIGIANI 180
           IDSEHLGIP+A+Y +IVRMP+AEFARIC+DLS+IGDTV+ISV+KEGV+FSTRGDIG ANI
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI 180

Query: 181 VCRRNAIVDKPEEAVIIEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLPLVVEYR 240
           VCR+N  VDKP+EA IIEM EPVSLTFALRYLNSFTKATPL+N VTIS+SS+LP+VVEY+
Sbjct: 181 VCRQNTTVDKPDEATIIEMNEPVSLTFALRYLNSFTKATPLSNNVTISLSSELPVVVEYK 240

Query: 241 IEDMGYIRYYLAPKIEEEDEAAAQE 266
           I +MGYIR+YLAPKIEE+DE  + E
Sbjct: 241 IAEMGYIRFYLAPKIEEDDEEQSLE 265

[Close]

BLAST of Sed0017261 vs. ExPASy Swiss-Prot
Match: O82797 (Proliferating cell nuclear antigen OS=Nicotiana tabacum OX=4097 GN=PCNA PE=2 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 8.2e-119
Identity = 208/260 (80.00%), Postives = 245/260 (94.23%), Query Frame = 0


Query: 1   MLELRLVQGGLLKKVLEAMKDLVNDANFDCSPSGFSLQAMDSSHVALLSLLLRSEGFQHF 60
           MLELRLVQG LLKKVLE++KDLVNDANFDCS +GFSLQAMDSSHVAL++LLLRSEGF+H+
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRNLSMGINLNNMAKMLRCAAIDDIVTLKADDGTHCLTFMFQNPSQDKIADFEMKLMD 120
           RCDRN+SMG+NL NMAKML+CA  DDI+TLKADDG+  +TFMF++P+QDKIADFEMKLMD
Sbjct: 61  RCDRNISMGMNLANMAKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSEHLGIPDAQYQSIVRMPAAEFARICRDLSTIGDTVLISVSKEGVQFSTRGDIGIANI 180
           IDSEHLGIP+A+Y +IVRMP+AEF+RIC+DLS+IGDTV+ISV+KEGV+FSTRGDIG ANI
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFSRICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI 180

Query: 181 VCRRNAIVDKPEEAVIIEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLPLVVEYR 240
           VCR+N  VDKPEEA +IEM EPVSLTFALRYLNSFTKATPL+N VTIS+SS+LP+VVEY+
Sbjct: 181 VCRQNTTVDKPEEATVIEMNEPVSLTFALRYLNSFTKATPLSNTVTISLSSELPVVVEYK 240

Query: 241 IEDMGYIRYYLAPKIEEEDE 261
           I +MGYIR+YLAPKIEE++E
Sbjct: 241 IAEMGYIRFYLAPKIEEDEE 260

[Close]

BLAST of Sed0017261 vs. ExPASy Swiss-Prot
Match: P17070 (Proliferating cell nuclear antigen OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0805200 PE=1 SV=2)

HSP 1 Score: 424.9 bits (1091), Expect = 9.1e-118
Identity = 205/260 (78.85%), Postives = 246/260 (94.62%), Query Frame = 0


Query: 1   MLELRLVQGGLLKKVLEAMKDLVNDANFDCSPSGFSLQAMDSSHVALLSLLLRSEGFQHF 60
           MLELRLVQG LLKKVLEA+++LV DANFDCS +GFSLQAMDSSHVAL++LLLRSEGF+H+
Sbjct: 1   MLELRLVQGSLLKKVLEAIRELVTDANFDCSGTGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRNLSMGINLNNMAKMLRCAAIDDIVTLKADDGTHCLTFMFQNPSQDKIADFEMKLMD 120
           RCDRNLSMG+NLNNMAKMLRCA  DDI+T+KADDG+  +TFMF++P+QDKIADFEMKLMD
Sbjct: 61  RCDRNLSMGMNLNNMAKMLRCAGNDDIITIKADDGSDTVTFMFESPNQDKIADFEMKLMD 120

Query: 121 IDSEHLGIPDAQYQSIVRMPAAEFARICRDLSTIGDTVLISVSKEGVQFSTRGDIGIANI 180
           IDSEHLGIPD++YQ+IVRMP++EF+RIC+DLS+IGDTV+ISV+KEGV+FST GDIG ANI
Sbjct: 121 IDSEHLGIPDSEYQAIVRMPSSEFSRICKDLSSIGDTVIISVTKEGVKFSTAGDIGTANI 180

Query: 181 VCRRNAIVDKPEEAVIIEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLPLVVEYR 240
           VCR+N  VDKPE+A IIEM+EPVSLTFALRY+NSFTKA+PL+ QVTIS+SS+LP+VVEY+
Sbjct: 181 VCRQNKTVDKPEDATIIEMQEPVSLTFALRYMNSFTKASPLSEQVTISLSSELPVVVEYK 240

Query: 241 IEDMGYIRYYLAPKIEEEDE 261
           I +MGYIR+YLAPKIEE++E
Sbjct: 241 IAEMGYIRFYLAPKIEEDEE 260

[Close]

BLAST of Sed0017261 vs. ExPASy Swiss-Prot
Match: Q00268 (Proliferating cell nuclear antigen OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 5.9e-117
Identity = 202/260 (77.69%), Postives = 245/260 (94.23%), Query Frame = 0


Query: 1   MLELRLVQGGLLKKVLEAMKDLVNDANFDCSPSGFSLQAMDSSHVALLSLLLRSEGFQHF 60
           MLELRLVQG LLKKV++++KDLVNDANFDCS +GFSLQAMDSSHVAL+++LLRSEGF+H+
Sbjct: 1   MLELRLVQGSLLKKVMDSIKDLVNDANFDCSATGFSLQAMDSSHVALVAVLLRSEGFEHY 60

Query: 61  RCDRNLSMGINLNNMAKMLRCAAIDDIVTLKADDGTHCLTFMFQNPSQDKIADFEMKLMD 120
           RCDRN+SMG+NL NMAKML+CA  DDI+T+KADDG+  +TFMF++P+QDKIADFEMKLMD
Sbjct: 61  RCDRNISMGMNLGNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSEHLGIPDAQYQSIVRMPAAEFARICRDLSTIGDTVLISVSKEGVQFSTRGDIGIANI 180
           IDSEHLGIP+A+Y +IVRMP+AEFARIC+DLS+IGDTV+ISV+KEGV+FSTRGDIG ANI
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI 180

Query: 181 VCRRNAIVDKPEEAVIIEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLPLVVEYR 240
           VCR+N  VDKPEEA +IEM EPVSLTFALRY+NSFTKA+PL++ VTIS+SS+LP+VVEY+
Sbjct: 181 VCRQNTTVDKPEEATVIEMNEPVSLTFALRYMNSFTKASPLSSTVTISLSSELPVVVEYK 240

Query: 241 IEDMGYIRYYLAPKIEEEDE 261
           I +MGYIR+YLAPKIEEE++
Sbjct: 241 IAEMGYIRFYLAPKIEEEED 260

[Close]

BLAST of Sed0017261 vs. ExPASy TrEMBL
Match: A0A5D3BG12 (Proliferating cell nuclear antigen OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00950 PE=3 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 1.8e-148
Identity = 288/353 (81.59%), Postives = 318/353 (90.08%), Query Frame = 0


Query: 1   MLELRLVQGGLLKKVLEAMKDLVNDANFDCSPSGFSLQAMDSSHVALLSLLLRSEGFQHF 60
           MLELRL+QG LLKKVLEAMKDLVNDANFDCSP+GFSLQAMDSSHVAL+SLLLRSE F+H+
Sbjct: 1   MLELRLLQGSLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSECFEHY 60

Query: 61  RCDRNLSMGINLNNMAKMLRCAAIDDIVTLKADDGTHCLTFMFQNPSQDKIADFEMKLMD 120
           RCDR +SMG+NLNNMAKMLRCA  DDIVTLKADDG+  LTFMF+NPSQDKIADFEMKLMD
Sbjct: 61  RCDRTISMGMNLNNMAKMLRCAGNDDIVTLKADDGSDSLTFMFENPSQDKIADFEMKLMD 120

Query: 121 IDSEHLGIPDAQYQSIVRMPAAEFARICRDLSTIGDTVLISVSKEGVQFSTRGDIGIANI 180
           IDSEHLGIPDA+YQSIV+MPA EFARIC+DLS+IGDTVLISVSKEGVQFSTRGDIG ANI
Sbjct: 121 IDSEHLGIPDAEYQSIVKMPAVEFARICKDLSSIGDTVLISVSKEGVQFSTRGDIGTANI 180

Query: 181 VCRRNAIVDKPEEAVIIEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLPLVVEYR 240
           VCRRN  VDKPEEAV+IEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLP+VVEYR
Sbjct: 181 VCRRNTTVDKPEEAVMIEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLPVVVEYR 240

Query: 241 IEDMGYIRYYLAPKIEEEDEAAAQEISRPQASSKNTAKAEPKPD-EMKINEDREAVIEIK 300
           IEDMGYIRYYLAPKIEEEDEAAA  IS+P+  SK+TAKA+PK D + K     E+  E+K
Sbjct: 241 IEDMGYIRYYLAPKIEEEDEAAA--ISKPETESKHTAKAKPKADLKPKFEAHPESESEMK 300

Query: 301 DEGNK-SVTEVKDEESKSVAEIKDDEKISPVESKAEEVTNTPKEPKIETMDLE 352
            E +K SV E+KD+++KSV  I D+EK S V+SKA+E TNTPKEPKIETMDLE
Sbjct: 301 SEEDKGSVIEIKDKDNKSVFVINDEEKNSSVKSKAQEETNTPKEPKIETMDLE 351

[Close]

BLAST of Sed0017261 vs. ExPASy TrEMBL
Match: A0A1S4E4U2 (Proliferating cell nuclear antigen OS=Cucumis melo OX=3656 GN=LOC103501410 PE=3 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 1.8e-148
Identity = 288/353 (81.59%), Postives = 318/353 (90.08%), Query Frame = 0


Query: 1   MLELRLVQGGLLKKVLEAMKDLVNDANFDCSPSGFSLQAMDSSHVALLSLLLRSEGFQHF 60
           MLELRL+QG LLKKVLEAMKDLVNDANFDCSP+GFSLQAMDSSHVAL+SLLLRSE F+H+
Sbjct: 1   MLELRLLQGSLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSECFEHY 60

Query: 61  RCDRNLSMGINLNNMAKMLRCAAIDDIVTLKADDGTHCLTFMFQNPSQDKIADFEMKLMD 120
           RCDR +SMG+NLNNMAKMLRCA  DDIVTLKADDG+  LTFMF+NPSQDKIADFEMKLMD
Sbjct: 61  RCDRTISMGMNLNNMAKMLRCAGNDDIVTLKADDGSDSLTFMFENPSQDKIADFEMKLMD 120

Query: 121 IDSEHLGIPDAQYQSIVRMPAAEFARICRDLSTIGDTVLISVSKEGVQFSTRGDIGIANI 180
           IDSEHLGIPDA+YQSIV+MPA EFARIC+DLS+IGDTVLISVSKEGVQFSTRGDIG ANI
Sbjct: 121 IDSEHLGIPDAEYQSIVKMPAVEFARICKDLSSIGDTVLISVSKEGVQFSTRGDIGTANI 180

Query: 181 VCRRNAIVDKPEEAVIIEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLPLVVEYR 240
           VCRRN  VDKPEEAV+IEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLP+VVEYR
Sbjct: 181 VCRRNTTVDKPEEAVMIEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLPVVVEYR 240

Query: 241 IEDMGYIRYYLAPKIEEEDEAAAQEISRPQASSKNTAKAEPKPD-EMKINEDREAVIEIK 300
           IEDMGYIRYYLAPKIEEEDEAAA  IS+P+  SK+TAKA+PK D + K     E+  E+K
Sbjct: 241 IEDMGYIRYYLAPKIEEEDEAAA--ISKPETESKHTAKAKPKADLKPKFEAHPESESEMK 300

Query: 301 DEGNK-SVTEVKDEESKSVAEIKDDEKISPVESKAEEVTNTPKEPKIETMDLE 352
            E +K SV E+KD+++KSV  I D+EK S V+SKA+E TNTPKEPKIETMDLE
Sbjct: 301 SEEDKGSVIEIKDKDNKSVFVINDEEKNSSVKSKAQEETNTPKEPKIETMDLE 351

[Close]

BLAST of Sed0017261 vs. ExPASy TrEMBL
Match: A0A6J1DUY3 (Proliferating cell nuclear antigen OS=Momordica charantia OX=3673 GN=LOC111023729 PE=3 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 1.5e-147
Identity = 287/355 (80.85%), Postives = 319/355 (89.86%), Query Frame = 0


Query: 1   MLELRLVQGGLLKKVLEAMKDLVNDANFDCSPSGFSLQAMDSSHVALLSLLLRSEGFQHF 60
           MLELRLVQG LLKKVLEAMKDLVNDANFDCS +GFSLQAMDSSHVAL+SLLLRS+GF+H+
Sbjct: 1   MLELRLVQGSLLKKVLEAMKDLVNDANFDCSATGFSLQAMDSSHVALVSLLLRSDGFEHY 60

Query: 61  RCDRNLSMGINLNNMAKMLRCAAIDDIVTLKADDGTHCLTFMFQNPSQDKIADFEMKLMD 120
           RCDRN+S+G+NL NMAKMLRCA  DDIVTLKADDG+ C+TFMF+NPSQDKIADFEMKLMD
Sbjct: 61  RCDRNISIGMNLGNMAKMLRCAGNDDIVTLKADDGSDCITFMFENPSQDKIADFEMKLMD 120

Query: 121 IDSEHLGIPDAQYQSIVRMPAAEFARICRDLSTIGDTVLISVSKEGVQFSTRGDIGIANI 180
           IDSEHLGIPDA YQSIVRMPAAEFARIC+DLS+IGDTVLISVSKEGVQFSTRGDIGIANI
Sbjct: 121 IDSEHLGIPDADYQSIVRMPAAEFARICKDLSSIGDTVLISVSKEGVQFSTRGDIGIANI 180

Query: 181 VCRRNAIVDKPEEAVIIEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLPLVVEYR 240
           VCRRN  VDKPEEAV+IEMEEPVSLTFALRYLNSFTKATPLA+QVTIS+SSDLP+V+EYR
Sbjct: 181 VCRRNTTVDKPEEAVVIEMEEPVSLTFALRYLNSFTKATPLASQVTISLSSDLPVVIEYR 240

Query: 241 IEDMGYIRYYLAPKIEEEDE--AAAQEISRPQASSKNTAKAEPKPDEMKINEDREAVIEI 300
           IEDMGYIRYYLAPKIEEEDE  AAA  ISRP+A  K+TA+A  +  E K   + ++  E+
Sbjct: 241 IEDMGYIRYYLAPKIEEEDEAAAAAAAISRPEAGPKHTAEAAKRKAESKPKFEPQSESEM 300

Query: 301 KDEGNK-SVTEVKDEESKSVAEIKDDE-KISPVESKAEEVTNTPKEPKIETMDLE 352
           K+E +K SV E+KDEE+KSV  IKD+E K S V SKAEE TNTPKEPKIETM+LE
Sbjct: 301 KNEEDKGSVIEIKDEENKSVVVIKDEEDKNSSVLSKAEEETNTPKEPKIETMELE 355

[Close]

BLAST of Sed0017261 vs. ExPASy TrEMBL
Match: A0A0A0KSC4 (Proliferating cell nuclear antigen OS=Cucumis sativus OX=3659 GN=Csa_5G198160 PE=3 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 2.9e-143
Identity = 281/352 (79.83%), Postives = 312/352 (88.64%), Query Frame = 0


Query: 1   MLELRLVQGGLLKKVLEAMKDLVNDANFDCSPSGFSLQAMDSSHVALLSLLLRSEGFQHF 60
           MLELRLVQG LLKKVLEA+KDLVNDANFDCS SGFSLQAMDSSHVAL+SLLLRSE F+H+
Sbjct: 1   MLELRLVQGSLLKKVLEALKDLVNDANFDCSSSGFSLQAMDSSHVALVSLLLRSESFEHY 60

Query: 61  RCDRNLSMGINLNNMAKMLRCAAIDDIVTLKADDGTHCLTFMFQNPSQDKIADFEMKLMD 120
           RCDR +SMG+NLNNMAKMLRCA  DDIVTLKADDG+  +TFMF+NPSQDKIADFEMKLMD
Sbjct: 61  RCDRTMSMGMNLNNMAKMLRCAGNDDIVTLKADDGSDSVTFMFENPSQDKIADFEMKLMD 120

Query: 121 IDSEHLGIPDAQYQSIVRMPAAEFARICRDLSTIGDTVLISVSKEGVQFSTRGDIGIANI 180
           IDSEHLGIPDA+YQSIV+MPA EFARIC+DLS+IGDTVLISVSKEGVQFSTRGDIG ANI
Sbjct: 121 IDSEHLGIPDAEYQSIVKMPAVEFARICKDLSSIGDTVLISVSKEGVQFSTRGDIGTANI 180

Query: 181 VCRRNAIVDKPEEAVIIEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLPLVVEYR 240
           VCRRN  VDKPEEAV+IEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLP+VVEYR
Sbjct: 181 VCRRNTTVDKPEEAVMIEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLPVVVEYR 240

Query: 241 IEDMGYIRYYLAPKIEEEDEAAAQEISRPQASSKNTAKAEPKPDEMKINEDREAVIEIKD 300
           IE MGYIRYYLAPKIEEEDEAA   IS+P+   K+TAKA+PK D +K N +     E+K 
Sbjct: 241 IEGMGYIRYYLAPKIEEEDEAAT--ISKPETEPKHTAKAKPKAD-LKPNFEPNPESEMKS 300

Query: 301 EGNK-SVTEVKDEESKSVAEIKDDEKISPVESKAEEVTNTPKEPKIETMDLE 352
           E ++ SV E+KD++ KSV  I D+ + SPV+SKA E TNTPKEPKIETM+LE
Sbjct: 301 EEDEGSVIEIKDKD-KSVFVINDEVQNSPVKSKAREETNTPKEPKIETMELE 348

[Close]

BLAST of Sed0017261 vs. ExPASy TrEMBL
Match: A0A6J1K7Q7 (Proliferating cell nuclear antigen OS=Cucurbita maxima OX=3661 GN=LOC111491393 PE=3 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 7.2e-142
Identity = 273/352 (77.56%), Postives = 301/352 (85.51%), Query Frame = 0


Query: 1   MLELRLVQGGLLKKVLEAMKDLVNDANFDCSPSGFSLQAMDSSHVALLSLLLRSEGFQHF 60
           MLELRL+QGGLLKKVLEAMKDLVNDANFDCSP+GFSLQAMDSSHVAL+SLLLRSEGF+H+
Sbjct: 24  MLELRLLQGGLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSEGFEHY 83

Query: 61  RCDRNLSMGINLNNMAKMLRCAAIDDIVTLKADDGTHCLTFMFQNPSQDKIADFEMKLMD 120
           RCDRN+SMG+NLNNMAKMLRCA  DDIVTLKADDG+ C+TFMF+NPSQDKIADFEMKLMD
Sbjct: 84  RCDRNVSMGMNLNNMAKMLRCAGNDDIVTLKADDGSDCITFMFENPSQDKIADFEMKLMD 143

Query: 121 IDSEHLGIPDAQYQSIVRMPAAEFARICRDLSTIGDTVLISVSKEGVQFSTRGDIGIANI 180
           IDSEHLGIPDA+YQSIVRMPAAEFARICRDLSTIGDTVLISVSKEGVQFSTRGD+G ANI
Sbjct: 144 IDSEHLGIPDAEYQSIVRMPAAEFARICRDLSTIGDTVLISVSKEGVQFSTRGDMGTANI 203

Query: 181 VCRRNAIVDKPEEAVIIEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLPLVVEYR 240
           VCRRN  VDKPEE VIIE+EEPVSLTFALRYLNSFTKATPLA QVTISMSSDLP+V+EYR
Sbjct: 204 VCRRNTTVDKPEEDVIIELEEPVSLTFALRYLNSFTKATPLATQVTISMSSDLPMVIEYR 263

Query: 241 IEDMGYIRYYLAPKIEEEDEAAAQEISRPQASSKNTAKAEPKPD-EMKINEDREAVIEIK 300
           IE MGYIRYYLAPKI+EE+EAAA+ I RP+   KNTAKA+PK D + K+    E+ ++I 
Sbjct: 264 IEGMGYIRYYLAPKIDEEEEAAAEAIRRPEIEPKNTAKAKPKADLKPKVKPKPESEMKI- 323

Query: 301 DEGNKSVTEVKDEESKSVAEIKDDEKISPVESKAEEVTNTPKEPKIETMDLE 352
                                 D++K S  E  AEE TNTPKEPKIETM+LE
Sbjct: 324 ----------------------DEDKESVNEFNAEEETNTPKEPKIETMELE 352

[Close]

BLAST of Sed0017261 vs. TAIR 10
Match: AT2G29570.1 (proliferating cell nuclear antigen 2 )

HSP 1 Score: 421.8 bits (1083), Expect = 5.5e-118
Identity = 204/260 (78.46%), Postives = 242/260 (93.08%), Query Frame = 0


Query: 1   MLELRLVQGGLLKKVLEAMKDLVNDANFDCSPSGFSLQAMDSSHVALLSLLLRSEGFQHF 60
           MLELRLVQG LLKKVLEA+KDLVNDANFDCS +GFSLQAMDSSHVAL+SLLLRSEGF+H+
Sbjct: 1   MLELRLVQGSLLKKVLEAVKDLVNDANFDCSTTGFSLQAMDSSHVALVSLLLRSEGFEHY 60

Query: 61  RCDRNLSMGINLNNMAKMLRCAAIDDIVTLKADDGTHCLTFMFQNPSQDKIADFEMKLMD 120
           RCDRNLSMG+NL NM+KML+CA  DDI+T+KADDG+  +TFMF++P+QDKIADFEMKLMD
Sbjct: 61  RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSEHLGIPDAQYQSIVRMPAAEFARICRDLSTIGDTVLISVSKEGVQFSTRGDIGIANI 180
           IDSEHLGIPDA+Y SIVRMP+ EF+RIC+DLS+IGDTV+ISV+KEGV+FST GDIG ANI
Sbjct: 121 IDSEHLGIPDAEYHSIVRMPSGEFSRICKDLSSIGDTVVISVTKEGVKFSTAGDIGTANI 180

Query: 181 VCRRNAIVDKPEEAVIIEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLPLVVEYR 240
           V R+N  VDKPE+A++IEM EPVSL+FALRY+NSFTKATPL+  VTIS+SS+LP+VVEY+
Sbjct: 181 VLRQNTTVDKPEDAIVIEMNEPVSLSFALRYMNSFTKATPLSETVTISLSSELPVVVEYK 240

Query: 241 IEDMGYIRYYLAPKIEEEDE 261
           + +MGYIRYYLAPKIEEE++
Sbjct: 241 VAEMGYIRYYLAPKIEEEED 260

[Close]

BLAST of Sed0017261 vs. TAIR 10
Match: AT1G07370.1 (proliferating cellular nuclear antigen 1 )

HSP 1 Score: 419.5 bits (1077), Expect = 2.7e-117
Identity = 203/260 (78.08%), Postives = 243/260 (93.46%), Query Frame = 0


Query: 1   MLELRLVQGGLLKKVLEAMKDLVNDANFDCSPSGFSLQAMDSSHVALLSLLLRSEGFQHF 60
           MLELRLVQG LLKKVLE++KDLVNDANFDCS +GFSLQAMDSSHVAL+SLLLRSEGF+H+
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 60

Query: 61  RCDRNLSMGINLNNMAKMLRCAAIDDIVTLKADDGTHCLTFMFQNPSQDKIADFEMKLMD 120
           RCDRNLSMG+NL NM+KML+CA  DDI+T+KADDG   +TFMF++P+QDKIADFEMKLMD
Sbjct: 61  RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGGDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSEHLGIPDAQYQSIVRMPAAEFARICRDLSTIGDTVLISVSKEGVQFSTRGDIGIANI 180
           IDSEHLGIPDA+Y SIVRMP+ EF+RIC+DLS+IGDTV+ISV+KEGV+FST GDIG ANI
Sbjct: 121 IDSEHLGIPDAEYHSIVRMPSNEFSRICKDLSSIGDTVVISVTKEGVKFSTAGDIGTANI 180

Query: 181 VCRRNAIVDKPEEAVIIEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLPLVVEYR 240
           V R+N  VDKPE+A++IEM+EPVSL+FALRY+NSFTKATPL++ VTIS+SS+LP+VVEY+
Sbjct: 181 VLRQNTTVDKPEDAIVIEMKEPVSLSFALRYMNSFTKATPLSDTVTISLSSELPVVVEYK 240

Query: 241 IEDMGYIRYYLAPKIEEEDE 261
           + +MGYIRYYLAPKIEEE++
Sbjct: 241 VAEMGYIRYYLAPKIEEEED 260

The following BLAST results are available for this feature:

BLAST of Sed0017261 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891866.1	1.9e-149	80.62	proliferating cell nuclear antigen-like [Benincasa hispida]	[more]
XP_016902995.1	3.6e-148	81.59	PREDICTED: proliferating cell nuclear antigen-like isoform X1 [Cucumis melo] >KA...	[more]
XP_022156894.1	3.1e-147	80.85	proliferating cell nuclear antigen-like [Momordica charantia]	[more]
XP_004150242.1	6.0e-143	79.83	proliferating cell nuclear antigen [Cucumis sativus] >KGN50626.1 hypothetical pr...	[more]
XP_022996079.1	1.5e-141	77.56	proliferating cell nuclear antigen-like [Cucurbita maxima]	[more]

BLAST of Sed0017261 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q00265	2.0e-120	64.93	Proliferating cell nuclear antigen large form OS=Daucus carota OX=4039 PE=2 SV=1	[more]
P24314	2.8e-119	79.62	Proliferating cell nuclear antigen OS=Catharanthus roseus OX=4058 PE=2 SV=1	[more]
O82797	8.2e-119	80.00	Proliferating cell nuclear antigen OS=Nicotiana tabacum OX=4097 GN=PCNA PE=2 SV=...	[more]
P17070	9.1e-118	78.85	Proliferating cell nuclear antigen OS=Oryza sativa subsp. japonica OX=39947 GN=O...	[more]
Q00268	5.9e-117	77.69	Proliferating cell nuclear antigen OS=Daucus carota OX=4039 PE=3 SV=1	[more]

BLAST of Sed0017261 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BG12	1.8e-148	81.59	Proliferating cell nuclear antigen OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S4E4U2	1.8e-148	81.59	Proliferating cell nuclear antigen OS=Cucumis melo OX=3656 GN=LOC103501410 PE=3 ...	[more]
A0A6J1DUY3	1.5e-147	80.85	Proliferating cell nuclear antigen OS=Momordica charantia OX=3673 GN=LOC11102372...	[more]
A0A0A0KSC4	2.9e-143	79.83	Proliferating cell nuclear antigen OS=Cucumis sativus OX=3659 GN=Csa_5G198160 PE...	[more]
A0A6J1K7Q7	7.2e-142	77.56	Proliferating cell nuclear antigen OS=Cucurbita maxima OX=3661 GN=LOC111491393 P...	[more]

BLAST of Sed0017261 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G29570.1	5.5e-118	78.46	proliferating cell nuclear antigen 2	[more]
AT1G07370.1	2.7e-117	78.08	proliferating cellular nuclear antigen 1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000730	Proliferating cell nuclear antigen, PCNA	PRINTS	PR00339	PCNACYCLIN	coord: 56..80 score: 64.76 coord: 110..132 score: 70.39 coord: 10..29 score: 67.38 coord: 203..217 score: 78.41 coord: 34..52 score: 75.19 coord: 241..258 score: 67.72
IPR000730	Proliferating cell nuclear antigen, PCNA	TIGRFAM	TIGR00590	TIGR00590	coord: 1..259 e-value: 3.1E-122 score: 405.0
IPR000730	Proliferating cell nuclear antigen, PCNA	HAMAP	MF_00317	DNApol_clamp_arch	coord: 2..255 score: 19.502949
None	No IPR available	GENE3D	3.70.10.10		coord: 1..260 e-value: 3.0E-116 score: 389.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 261..351
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 278..351
None	No IPR available	PANTHER	PTHR11352	PROLIFERATING CELL NUCLEAR ANTIGEN	coord: 1..314
None	No IPR available	PANTHER	PTHR11352:SF8	PROLIFERATING CELL NUCLEAR ANTIGEN	coord: 1..314
None	No IPR available	CDD	cd00577	PCNA	coord: 5..255 e-value: 2.28566E-93 score: 276.818
None	No IPR available	SUPERFAMILY	55979	DNA clamp	coord: 127..255
None	No IPR available	SUPERFAMILY	55979	DNA clamp	coord: 1..126
IPR022648	Proliferating cell nuclear antigen, PCNA, N-terminal	PFAM	PF00705	PCNA_N	coord: 1..125 e-value: 1.0E-53 score: 180.4
IPR022649	Proliferating cell nuclear antigen, PCNA, C-terminal	PFAM	PF02747	PCNA_C	coord: 127..254 e-value: 2.6E-59 score: 199.0
IPR022659	Proliferating cell nuclear antigen, PCNA, conserved site	PROSITE	PS00293	PCNA_2	coord: 61..79
IPR022659	Proliferating cell nuclear antigen, PCNA, conserved site	PROSITE	PS01251	PCNA_1	coord: 34..57

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017261.1	Sed0017261.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006272	leading strand elongation
biological_process	GO:0006298	mismatch repair
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0006275	regulation of DNA replication
biological_process	GO:0019985	translesion synthesis
cellular_component	GO:0043626	PCNA complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0030337	DNA polymerase processivity factor activity