Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTGCCTAAATACAGGAGGCCCATGGAAGCCGGAAGAAGAAAACATTTATCCTCATTTTGTTCCTCAAAACACGCATTTCTCTTTCTCCGAGCTCGAGCTCCGTTAATGGCGCCGTGGTCGTCACCGTCCTCCTCTCCCAAAGGTATTTTCGTCACCTTTCCGGTGCTCTTCCTCGCCGCAATCGCTGCGATTCTCTTCTCTTTCTTCTTCCTCTCCGATCTCTCTTCTTGTCCCTGCCCTGCTTCTCCCCGCATTGTCGTCTCCGGCGCCGGAGCCCTCGTCGGCGATTGTCTTCTGACGAGCAAGGCCGATATCGACTGGGTGAAGGATCAGATCAGAGCCAATGGGCTTCAGATGCACGACAATGTGCTCCGGAAAGGTATCAACCCTCGCACTAGGGCTCAGCAGCTCGGAGATCTCAGACAGTGAGTAATGTACCGAATTTCTTTTCTTCTCTTCTTTGGTTTGTGAATTGGAAACGAATATTGAATCTGCTGTTGTTTATGACTCGGAATTACTGCAGTTGAGCATCTAATTTAGATCAGAATTTGGCTTGGGTCTGTTCTAAGATTGTTTTTTAAAGTTTCTGCATTATTTTTCTTTGTTACGGAATTGGAAGTTTTGTGGTTTTTCTTCTGTGAAATCGAATGGAAACGAGGTAGAATTTTAAATTGTATAAATTTGGAATATGAAACTTGCTTGTATGCATTGTCTAGAACTCCATCAAGGCTTTTGATTGATGGTTATTGATCCCATTGGTCAAATTACTTCATTTTTCTATTGTAAATTGGATAACTTCATTTCTGCTCATATCATTTTGGAATATCAATGCAGAATCTTGATAATTTTGATAATAGTAATTCGAACTGGCTTCAATGATTTATTTAGAATGCCATCCAAAGCTCCTCGAATGATTCTTATGAATTCTGCTGGTTAAATTACTTACTAATCTCTTGTAACTTTGGTATCTTTGTGTTGTTGTTGATGCCTTGTTCATTGTTCATGCAATCCTGTTTTTGTTTTTTTTATATTCGTGAGTGTCCGGGCCAGCCAACTTGTTCCTTTATATGTACCTCATGAGTTGTGTAGTTTGTGTTATAAAAATACTTTATCTATTTGACTTAATTCGTAATATTCATGATAGATTCAAGGGTATATCACATTACGAGGGATCCGAGGAACAGAACCGTACAATACTTCCATGTCCTGGCGAGCTCCTCGTTGAAGAGCACCATAGTAACTATGGTGAACCTTGGGCAGGTGGGCGAGACGTGTTTGAATTCCTAGCGGAGTTCTCTCATGTAGCACCGGATGCACGTGTTTTGGAGATTGGATGTGGCACTCTCCGAGTTGGCTTGCATTTCATTCGATACCTTAAGCCTGGACATTACCATTGTCTTGAGAGGGATGAGCTCTCTTTGATGGCCACCTTTAGGTACGAGCTTCCATCGCAAGGTCTTTTAAGCAAACGCCCGCTAATCGTAAAAGGGGACAACATGGACTTCACTGAGTTTGGCTCTGAAGTTGTATATGATTTAATATATGCTAGTGCTGTGTTTCTTCATATGCCTGGTAAGCTTGTATGGGTTGGACTGGAGAAGCTTGCTAACAAATTAAAGCCACATGAAGGCCGTATCTTTGTGTCGCACAACATAAAGTTCTGTTCGCGGTTAGGTGGGGAGGAATGTACCAAGCGTCTCACGAACTTGGGACTTGAATATGTAGGAAAGCGCACACACGATAGCTTACTTTTCAATCACTACGAGATTTGGTTCGAGTTCAAGCGATCAAAGGCTTAGTAAATACTAGCATTCTCTCTGTATCTGTATCATTAAGCCAGATATGTGAAGATGAATATAGGAAGCTATCATCAGTTCATATTCTTAGTCTTGCTGCTTGAGAATGCTCCTAACATTTTCAACTCCTTGAGTGGTTTATATAGAGAAACTAGGAGAAATTGAGGACCATAAACAAAATGGTGTTTCATTTGAATGCTGCTTAGTTTCAGAAGAAAAAAGTGGCCCCTCTCTTCTTCTGTGTGCTTAGATTTAAAGCTTAGGAC
mRNA sequence
ATTTGCCTAAATACAGGAGGCCCATGGAAGCCGGAAGAAGAAAACATTTATCCTCATTTTGTTCCTCAAAACACGCATTTCTCTTTCTCCGAGCTCGAGCTCCGTTAATGGCGCCGTGGTCGTCACCGTCCTCCTCTCCCAAAGGTATTTTCGTCACCTTTCCGGTGCTCTTCCTCGCCGCAATCGCTGCGATTCTCTTCTCTTTCTTCTTCCTCTCCGATCTCTCTTCTTGTCCCTGCCCTGCTTCTCCCCGCATTGTCGTCTCCGGCGCCGGAGCCCTCGTCGGCGATTGTCTTCTGACGAGCAAGGCCGATATCGACTGGGTGAAGGATCAGATCAGAGCCAATGGGCTTCAGATGCACGACAATGTGCTCCGGAAAGGTATCAACCCTCGCACTAGGGCTCAGCAGCTCGGAGATCTCAGACAATTCAAGGGTATATCACATTACGAGGGATCCGAGGAACAGAACCGTACAATACTTCCATGTCCTGGCGAGCTCCTCGTTGAAGAGCACCATAGTAACTATGGTGAACCTTGGGCAGGTGGGCGAGACGTGTTTGAATTCCTAGCGGAGTTCTCTCATGTAGCACCGGATGCACGTGTTTTGGAGATTGGATGTGGCACTCTCCGAGTTGGCTTGCATTTCATTCGATACCTTAAGCCTGGACATTACCATTGTCTTGAGAGGGATGAGCTCTCTTTGATGGCCACCTTTAGGTACGAGCTTCCATCGCAAGGTCTTTTAAGCAAACGCCCGCTAATCGTAAAAGGGGACAACATGGACTTCACTGAGTTTGGCTCTGAAGTTGTATATGATTTAATATATGCTAGTGCTGTGTTTCTTCATATGCCTGGTAAGCTTGTATGGGTTGGACTGGAGAAGCTTGCTAACAAATTAAAGCCACATGAAGGCCGTATCTTTGTGTCGCACAACATAAAGTTCTGTTCGCGGTTAGGTGGGGAGGAATGTACCAAGCGTCTCACGAACTTGGGACTTGAATATGTAGGAAAGCGCACACACGATAGCTTACTTTTCAATCACTACGAGATTTGGTTCGAGTTCAAGCGATCAAAGGCTTAGTAAATACTAGCATTCTCTCTGTATCTGTATCATTAAGCCAGATATGTGAAGATGAATATAGGAAGCTATCATCAGTTCATATTCTTAGTCTTGCTGCTTGAGAATGCTCCTAACATTTTCAACTCCTTGAGTGGTTTATATAGAGAAACTAGGAGAAATTGAGGACCATAAACAAAATGGTGTTTCATTTGAATGCTGCTTAGTTTCAGAAGAAAAAAGTGGCCCCTCTCTTCTTCTGTGTGCTTAGATTTAAAGCTTAGGAC
Coding sequence (CDS)
ATGGAAGCCGGAAGAAGAAAACATTTATCCTCATTTTGTTCCTCAAAACACGCATTTCTCTTTCTCCGAGCTCGAGCTCCGTTAATGGCGCCGTGGTCGTCACCGTCCTCCTCTCCCAAAGGTATTTTCGTCACCTTTCCGGTGCTCTTCCTCGCCGCAATCGCTGCGATTCTCTTCTCTTTCTTCTTCCTCTCCGATCTCTCTTCTTGTCCCTGCCCTGCTTCTCCCCGCATTGTCGTCTCCGGCGCCGGAGCCCTCGTCGGCGATTGTCTTCTGACGAGCAAGGCCGATATCGACTGGGTGAAGGATCAGATCAGAGCCAATGGGCTTCAGATGCACGACAATGTGCTCCGGAAAGGTATCAACCCTCGCACTAGGGCTCAGCAGCTCGGAGATCTCAGACAATTCAAGGGTATATCACATTACGAGGGATCCGAGGAACAGAACCGTACAATACTTCCATGTCCTGGCGAGCTCCTCGTTGAAGAGCACCATAGTAACTATGGTGAACCTTGGGCAGGTGGGCGAGACGTGTTTGAATTCCTAGCGGAGTTCTCTCATGTAGCACCGGATGCACGTGTTTTGGAGATTGGATGTGGCACTCTCCGAGTTGGCTTGCATTTCATTCGATACCTTAAGCCTGGACATTACCATTGTCTTGAGAGGGATGAGCTCTCTTTGATGGCCACCTTTAGGTACGAGCTTCCATCGCAAGGTCTTTTAAGCAAACGCCCGCTAATCGTAAAAGGGGACAACATGGACTTCACTGAGTTTGGCTCTGAAGTTGTATATGATTTAATATATGCTAGTGCTGTGTTTCTTCATATGCCTGGTAAGCTTGTATGGGTTGGACTGGAGAAGCTTGCTAACAAATTAAAGCCACATGAAGGCCGTATCTTTGTGTCGCACAACATAAAGTTCTGTTCGCGGTTAGGTGGGGAGGAATGTACCAAGCGTCTCACGAACTTGGGACTTGAATATGTAGGAAAGCGCACACACGATAGCTTACTTTTCAATCACTACGAGATTTGGTTCGAGTTCAAGCGATCAAAGGCTTAG
Protein sequence
MEAGRRKHLSSFCSSKHAFLFLRARAPLMAPWSSPSSSPKGIFVTFPVLFLAAIAAILFSFFFLSDLSSCPCPASPRIVVSGAGALVGDCLLTSKADIDWVKDQIRANGLQMHDNVLRKGINPRTRAQQLGDLRQFKGISHYEGSEEQNRTILPCPGELLVEEHHSNYGEPWAGGRDVFEFLAEFSHVAPDARVLEIGCGTLRVGLHFIRYLKPGHYHCLERDELSLMATFRYELPSQGLLSKRPLIVKGDNMDFTEFGSEVVYDLIYASAVFLHMPGKLVWVGLEKLANKLKPHEGRIFVSHNIKFCSRLGGEECTKRLTNLGLEYVGKRTHDSLLFNHYEIWFEFKRSKA
Homology
BLAST of Sed0017257 vs. NCBI nr
Match:
XP_022142977.1 (uncharacterized protein LOC111012976 [Momordica charantia])
HSP 1 Score: 588.2 bits (1515), Expect = 4.7e-164
Identity = 286/328 (87.20%), Postives = 303/328 (92.38%), Query Frame = 0
Query: 29 MAPWSSPSSSPKGIFVTFPVLFLAAIAAILFSFFFLSDLSSCPCPASPRIVVS----GAG 88
MA WSS SSSPKGI VTFPVL L A AAILF FFF S+LSSC CPASPRIVVS GAG
Sbjct: 1 MALWSS-SSSPKGIVVTFPVLLLTASAAILFLFFFFSNLSSCSCPASPRIVVSGTAAGAG 60
Query: 89 ALVGDCLLTSKADIDWVKDQIRANGLQMHDNVLRKGINPRTRAQQLGDLRQFKGISHYEG 148
VGD + TSK D+DWVKDQIRANGLQMH+NVLRKGINPRTRAQQL DLRQFKGISHYEG
Sbjct: 61 GCVGDGVRTSKDDVDWVKDQIRANGLQMHENVLRKGINPRTRAQQLEDLRQFKGISHYEG 120
Query: 149 SEEQNRTILPCPGELLVEEHHSNYGEPWAGGRDVFEFLAEFSHVAPDARVLEIGCGTLRV 208
S+EQNRT PCPGELLVEEHHSNYGEPWAGGRDVFEFLAEFSH+ PDA VLEIGCGTLRV
Sbjct: 121 SDEQNRTAFPCPGELLVEEHHSNYGEPWAGGRDVFEFLAEFSHLKPDAHVLEIGCGTLRV 180
Query: 209 GLHFIRYLKPGHYHCLERDELSLMATFRYELPSQGLLSKRPLIVKGDNMDFTEFGSEVVY 268
GLHFIRYLKPGHYHCLERDELS+MA FRYELPSQGLLSKRPLIVKG++MDFT+FGSEVVY
Sbjct: 181 GLHFIRYLKPGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFTKFGSEVVY 240
Query: 269 DLIYASAVFLHMPGKLVWVGLEKLANKLKPHEGRIFVSHNIKFCSRLGGEECTKRLTNLG 328
DLIYASAVFLHMP KLVWVGLE+LA+KLKP++GRIFVSHNIKFCSRLGGEECTKRLTNLG
Sbjct: 241 DLIYASAVFLHMPDKLVWVGLERLASKLKPYDGRIFVSHNIKFCSRLGGEECTKRLTNLG 300
Query: 329 LEYVGKRTHDSLLFNHYEIWFEFKRSKA 353
LEY+GKRTHDSLLFNHYEIWFEF++SKA
Sbjct: 301 LEYLGKRTHDSLLFNHYEIWFEFRQSKA 327
BLAST of Sed0017257 vs. NCBI nr
Match:
KAG6590086.1 (hypothetical protein SDJN03_15509, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023755.1 hypothetical protein SDJN02_14781 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 579.3 bits (1492), Expect = 2.2e-161
Identity = 279/331 (84.29%), Postives = 300/331 (90.63%), Query Frame = 0
Query: 29 MAPWSSPSSSPKGIFVTFPVLFLAAIAAILFSFFFLSDLSSCPCPASPRIVVS------- 88
MA WSS SSSPKGI VTFPVL L+A A ILF FFF+S+ SSCPCP SP IVVS
Sbjct: 1 MALWSS-SSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAG 60
Query: 89 -GAGALVGDCLLTSKADIDWVKDQIRANGLQMHDNVLRKGINPRTRAQQLGDLRQFKGIS 148
GAGA + D +LT+K D+DWVKDQI+ANGLQMHDNVLRKGINPRTRAQQL DLRQFKGIS
Sbjct: 61 AGAGAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRTRAQQLEDLRQFKGIS 120
Query: 149 HYEGSEEQNRTILPCPGELLVEEHHSNYGEPWAGGRDVFEFLAEFSHVAPDARVLEIGCG 208
HYEGS+EQNRT LPCPGELLVEEHHSNYGEPWAGGRDVFE+LAEFSH+ PDA VLEIGCG
Sbjct: 121 HYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCG 180
Query: 209 TLRVGLHFIRYLKPGHYHCLERDELSLMATFRYELPSQGLLSKRPLIVKGDNMDFTEFGS 268
TLRVGLHFIRYLK GHYHCLERDELS+MA FRYELPSQGLLSKRPLIVKG++MDF +FGS
Sbjct: 181 TLRVGLHFIRYLKRGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGS 240
Query: 269 EVVYDLIYASAVFLHMPGKLVWVGLEKLANKLKPHEGRIFVSHNIKFCSRLGGEECTKRL 328
EV+YDLIYASAVFLHMP KLVWVGLE+LANKLKP++GRIFVSHNIKFCSRLGGEECTKRL
Sbjct: 241 EVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRL 300
Query: 329 TNLGLEYVGKRTHDSLLFNHYEIWFEFKRSK 352
NLGLEY+GKRTHDSLLFNHYEIWFEF+RSK
Sbjct: 301 MNLGLEYLGKRTHDSLLFNHYEIWFEFRRSK 330
BLAST of Sed0017257 vs. NCBI nr
Match:
XP_022961141.1 (uncharacterized protein LOC111461742 [Cucurbita moschata] >XP_022961142.1 uncharacterized protein LOC111461742 [Cucurbita moschata])
HSP 1 Score: 578.6 bits (1490), Expect = 3.8e-161
Identity = 278/327 (85.02%), Postives = 299/327 (91.44%), Query Frame = 0
Query: 29 MAPWSSPSSSPKGIFVTFPVLFLAAIAAILFSFFFLSDLSSCPCPASPRIVVSG----AG 88
MA WSS SSSPKGI VTFPVL L+A A ILF FFF+S+ SSCPCP SP IVVS AG
Sbjct: 1 MALWSS-SSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAG 60
Query: 89 ALVGDCLLTSKADIDWVKDQIRANGLQMHDNVLRKGINPRTRAQQLGDLRQFKGISHYEG 148
A + D +LT+K D+DWVKDQI+ANGLQMHDNVLRKGINPRTRAQQL DLRQFKGISHYEG
Sbjct: 61 AQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRTRAQQLEDLRQFKGISHYEG 120
Query: 149 SEEQNRTILPCPGELLVEEHHSNYGEPWAGGRDVFEFLAEFSHVAPDARVLEIGCGTLRV 208
S+EQNRT LPCPGELLVEEHHSNYGEPWAGGRDVFE+LAEFSH+ PDA VLEIGCGTLRV
Sbjct: 121 SDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRV 180
Query: 209 GLHFIRYLKPGHYHCLERDELSLMATFRYELPSQGLLSKRPLIVKGDNMDFTEFGSEVVY 268
GLHFIRYLK GHYHCLERDELS+MA FRYELPSQGLLSKRPLIVKG++MDF +FGSEV+Y
Sbjct: 181 GLHFIRYLKRGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLY 240
Query: 269 DLIYASAVFLHMPGKLVWVGLEKLANKLKPHEGRIFVSHNIKFCSRLGGEECTKRLTNLG 328
DLIYASAVFLHMP KLVWVGLE+LANKLKP++GRIFVSHNIKFCSRLGGEECTKRL NLG
Sbjct: 241 DLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMNLG 300
Query: 329 LEYVGKRTHDSLLFNHYEIWFEFKRSK 352
LEY+GKRTHDSLLFNHYEIWFEF+RSK
Sbjct: 301 LEYLGKRTHDSLLFNHYEIWFEFRRSK 326
BLAST of Sed0017257 vs. NCBI nr
Match:
XP_023516022.1 (uncharacterized protein LOC111780012 [Cucurbita pepo subsp. pepo] >XP_023516023.1 uncharacterized protein LOC111780012 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 578.2 bits (1489), Expect = 4.9e-161
Identity = 278/333 (83.48%), Postives = 300/333 (90.09%), Query Frame = 0
Query: 29 MAPWSSPSSSPKGIFVTFPVLFLAAIAAILFSFFFLSDLSSCPCPASPRIVVS------- 88
MA WSS SSSPKGI VTFPVL L+A + ILF FFF+S+ SSCPCP SP IVVS
Sbjct: 1 MALWSS-SSSPKGIVVTFPVLLLSAFSVILFCFFFISNFSSCPCPVSPHIVVSSIAAGAG 60
Query: 89 ---GAGALVGDCLLTSKADIDWVKDQIRANGLQMHDNVLRKGINPRTRAQQLGDLRQFKG 148
G GA +GD +LT+K D+DWVKDQI+ANGLQMHDNVLRKGINPRTRAQQL DLRQFKG
Sbjct: 61 AGAGDGAQIGDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRTRAQQLEDLRQFKG 120
Query: 149 ISHYEGSEEQNRTILPCPGELLVEEHHSNYGEPWAGGRDVFEFLAEFSHVAPDARVLEIG 208
ISHYEGS+EQNRT LPCPGELLVEEHHSNYGEPWAGGRDVFE+LAEFSH+ PDA VLEIG
Sbjct: 121 ISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIG 180
Query: 209 CGTLRVGLHFIRYLKPGHYHCLERDELSLMATFRYELPSQGLLSKRPLIVKGDNMDFTEF 268
CGTLRVGLHFIRYLK GHYHCLERDELS+MA FRYELPSQGLLSKRPLIVKG++MDF +F
Sbjct: 181 CGTLRVGLHFIRYLKRGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKF 240
Query: 269 GSEVVYDLIYASAVFLHMPGKLVWVGLEKLANKLKPHEGRIFVSHNIKFCSRLGGEECTK 328
GSEV+YDLIYASAVFLHMP KLVWVGLE+LANKLKP++GRIFVSHNIKFCSRLGGEECTK
Sbjct: 241 GSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTK 300
Query: 329 RLTNLGLEYVGKRTHDSLLFNHYEIWFEFKRSK 352
RL NLGLEY+GKRTHDSLLFNHYEIWFEF+RSK
Sbjct: 301 RLMNLGLEYLGKRTHDSLLFNHYEIWFEFRRSK 332
BLAST of Sed0017257 vs. NCBI nr
Match:
XP_022987105.1 (uncharacterized protein LOC111484758 [Cucurbita maxima] >XP_022987106.1 uncharacterized protein LOC111484758 [Cucurbita maxima])
HSP 1 Score: 577.8 bits (1488), Expect = 6.4e-161
Identity = 278/331 (83.99%), Postives = 300/331 (90.63%), Query Frame = 0
Query: 29 MAPWSSPSSSPKGIFVTFPVLFLAAIAAILFSFFFLSDLSSCPCPASPRIVVS------- 88
MA WSS SSSPKGI VTFPVL L+A A ILF FFF+S+ SSCPCP SP IVVS
Sbjct: 1 MALWSS-SSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAV 60
Query: 89 -GAGALVGDCLLTSKADIDWVKDQIRANGLQMHDNVLRKGINPRTRAQQLGDLRQFKGIS 148
GAGA + D +LT++ D+DWVKDQI+ANGLQMHDNVLRKGINPRTRAQQL DLRQFKGIS
Sbjct: 61 AGAGAQIRDGVLTNEEDVDWVKDQIKANGLQMHDNVLRKGINPRTRAQQLEDLRQFKGIS 120
Query: 149 HYEGSEEQNRTILPCPGELLVEEHHSNYGEPWAGGRDVFEFLAEFSHVAPDARVLEIGCG 208
HYEGS+EQNRT LPCPGELLVEEHHSNYGEPWAGGRDVFE+LAEFSH+ PDA VLEIGCG
Sbjct: 121 HYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCG 180
Query: 209 TLRVGLHFIRYLKPGHYHCLERDELSLMATFRYELPSQGLLSKRPLIVKGDNMDFTEFGS 268
TLRVGLHFIRYLK GHYHCLERDELS+MA FRYELPSQGLLSKRPLIVKG++MDF +FGS
Sbjct: 181 TLRVGLHFIRYLKRGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGS 240
Query: 269 EVVYDLIYASAVFLHMPGKLVWVGLEKLANKLKPHEGRIFVSHNIKFCSRLGGEECTKRL 328
EV+YDLIYASAVFLHMP KLVWVGLE+LANKLKP++GRIFVSHNIKFCSRLGGEECTKRL
Sbjct: 241 EVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRL 300
Query: 329 TNLGLEYVGKRTHDSLLFNHYEIWFEFKRSK 352
NLGLEY+GKRTHDSLLFNHYEIWFEF+RSK
Sbjct: 301 MNLGLEYLGKRTHDSLLFNHYEIWFEFRRSK 330
BLAST of Sed0017257 vs. ExPASy TrEMBL
Match:
A0A6J1CPF7 (uncharacterized protein LOC111012976 OS=Momordica charantia OX=3673 GN=LOC111012976 PE=4 SV=1)
HSP 1 Score: 588.2 bits (1515), Expect = 2.3e-164
Identity = 286/328 (87.20%), Postives = 303/328 (92.38%), Query Frame = 0
Query: 29 MAPWSSPSSSPKGIFVTFPVLFLAAIAAILFSFFFLSDLSSCPCPASPRIVVS----GAG 88
MA WSS SSSPKGI VTFPVL L A AAILF FFF S+LSSC CPASPRIVVS GAG
Sbjct: 1 MALWSS-SSSPKGIVVTFPVLLLTASAAILFLFFFFSNLSSCSCPASPRIVVSGTAAGAG 60
Query: 89 ALVGDCLLTSKADIDWVKDQIRANGLQMHDNVLRKGINPRTRAQQLGDLRQFKGISHYEG 148
VGD + TSK D+DWVKDQIRANGLQMH+NVLRKGINPRTRAQQL DLRQFKGISHYEG
Sbjct: 61 GCVGDGVRTSKDDVDWVKDQIRANGLQMHENVLRKGINPRTRAQQLEDLRQFKGISHYEG 120
Query: 149 SEEQNRTILPCPGELLVEEHHSNYGEPWAGGRDVFEFLAEFSHVAPDARVLEIGCGTLRV 208
S+EQNRT PCPGELLVEEHHSNYGEPWAGGRDVFEFLAEFSH+ PDA VLEIGCGTLRV
Sbjct: 121 SDEQNRTAFPCPGELLVEEHHSNYGEPWAGGRDVFEFLAEFSHLKPDAHVLEIGCGTLRV 180
Query: 209 GLHFIRYLKPGHYHCLERDELSLMATFRYELPSQGLLSKRPLIVKGDNMDFTEFGSEVVY 268
GLHFIRYLKPGHYHCLERDELS+MA FRYELPSQGLLSKRPLIVKG++MDFT+FGSEVVY
Sbjct: 181 GLHFIRYLKPGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFTKFGSEVVY 240
Query: 269 DLIYASAVFLHMPGKLVWVGLEKLANKLKPHEGRIFVSHNIKFCSRLGGEECTKRLTNLG 328
DLIYASAVFLHMP KLVWVGLE+LA+KLKP++GRIFVSHNIKFCSRLGGEECTKRLTNLG
Sbjct: 241 DLIYASAVFLHMPDKLVWVGLERLASKLKPYDGRIFVSHNIKFCSRLGGEECTKRLTNLG 300
Query: 329 LEYVGKRTHDSLLFNHYEIWFEFKRSKA 353
LEY+GKRTHDSLLFNHYEIWFEF++SKA
Sbjct: 301 LEYLGKRTHDSLLFNHYEIWFEFRQSKA 327
BLAST of Sed0017257 vs. ExPASy TrEMBL
Match:
A0A6J1H9D1 (uncharacterized protein LOC111461742 OS=Cucurbita moschata OX=3662 GN=LOC111461742 PE=4 SV=1)
HSP 1 Score: 578.6 bits (1490), Expect = 1.8e-161
Identity = 278/327 (85.02%), Postives = 299/327 (91.44%), Query Frame = 0
Query: 29 MAPWSSPSSSPKGIFVTFPVLFLAAIAAILFSFFFLSDLSSCPCPASPRIVVSG----AG 88
MA WSS SSSPKGI VTFPVL L+A A ILF FFF+S+ SSCPCP SP IVVS AG
Sbjct: 1 MALWSS-SSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAG 60
Query: 89 ALVGDCLLTSKADIDWVKDQIRANGLQMHDNVLRKGINPRTRAQQLGDLRQFKGISHYEG 148
A + D +LT+K D+DWVKDQI+ANGLQMHDNVLRKGINPRTRAQQL DLRQFKGISHYEG
Sbjct: 61 AQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRTRAQQLEDLRQFKGISHYEG 120
Query: 149 SEEQNRTILPCPGELLVEEHHSNYGEPWAGGRDVFEFLAEFSHVAPDARVLEIGCGTLRV 208
S+EQNRT LPCPGELLVEEHHSNYGEPWAGGRDVFE+LAEFSH+ PDA VLEIGCGTLRV
Sbjct: 121 SDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRV 180
Query: 209 GLHFIRYLKPGHYHCLERDELSLMATFRYELPSQGLLSKRPLIVKGDNMDFTEFGSEVVY 268
GLHFIRYLK GHYHCLERDELS+MA FRYELPSQGLLSKRPLIVKG++MDF +FGSEV+Y
Sbjct: 181 GLHFIRYLKRGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLY 240
Query: 269 DLIYASAVFLHMPGKLVWVGLEKLANKLKPHEGRIFVSHNIKFCSRLGGEECTKRLTNLG 328
DLIYASAVFLHMP KLVWVGLE+LANKLKP++GRIFVSHNIKFCSRLGGEECTKRL NLG
Sbjct: 241 DLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMNLG 300
Query: 329 LEYVGKRTHDSLLFNHYEIWFEFKRSK 352
LEY+GKRTHDSLLFNHYEIWFEF+RSK
Sbjct: 301 LEYLGKRTHDSLLFNHYEIWFEFRRSK 326
BLAST of Sed0017257 vs. ExPASy TrEMBL
Match:
A0A6J1JFW2 (uncharacterized protein LOC111484758 OS=Cucurbita maxima OX=3661 GN=LOC111484758 PE=4 SV=1)
HSP 1 Score: 577.8 bits (1488), Expect = 3.1e-161
Identity = 278/331 (83.99%), Postives = 300/331 (90.63%), Query Frame = 0
Query: 29 MAPWSSPSSSPKGIFVTFPVLFLAAIAAILFSFFFLSDLSSCPCPASPRIVVS------- 88
MA WSS SSSPKGI VTFPVL L+A A ILF FFF+S+ SSCPCP SP IVVS
Sbjct: 1 MALWSS-SSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAV 60
Query: 89 -GAGALVGDCLLTSKADIDWVKDQIRANGLQMHDNVLRKGINPRTRAQQLGDLRQFKGIS 148
GAGA + D +LT++ D+DWVKDQI+ANGLQMHDNVLRKGINPRTRAQQL DLRQFKGIS
Sbjct: 61 AGAGAQIRDGVLTNEEDVDWVKDQIKANGLQMHDNVLRKGINPRTRAQQLEDLRQFKGIS 120
Query: 149 HYEGSEEQNRTILPCPGELLVEEHHSNYGEPWAGGRDVFEFLAEFSHVAPDARVLEIGCG 208
HYEGS+EQNRT LPCPGELLVEEHHSNYGEPWAGGRDVFE+LAEFSH+ PDA VLEIGCG
Sbjct: 121 HYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCG 180
Query: 209 TLRVGLHFIRYLKPGHYHCLERDELSLMATFRYELPSQGLLSKRPLIVKGDNMDFTEFGS 268
TLRVGLHFIRYLK GHYHCLERDELS+MA FRYELPSQGLLSKRPLIVKG++MDF +FGS
Sbjct: 181 TLRVGLHFIRYLKRGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGS 240
Query: 269 EVVYDLIYASAVFLHMPGKLVWVGLEKLANKLKPHEGRIFVSHNIKFCSRLGGEECTKRL 328
EV+YDLIYASAVFLHMP KLVWVGLE+LANKLKP++GRIFVSHNIKFCSRLGGEECTKRL
Sbjct: 241 EVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRL 300
Query: 329 TNLGLEYVGKRTHDSLLFNHYEIWFEFKRSK 352
NLGLEY+GKRTHDSLLFNHYEIWFEF+RSK
Sbjct: 301 MNLGLEYLGKRTHDSLLFNHYEIWFEFRRSK 330
BLAST of Sed0017257 vs. ExPASy TrEMBL
Match:
A0A0A0M070 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G660190 PE=4 SV=1)
HSP 1 Score: 569.7 bits (1467), Expect = 8.5e-159
Identity = 271/327 (82.87%), Postives = 299/327 (91.44%), Query Frame = 0
Query: 29 MAPWSSPSSSPKGIFVTFPVLFLAAIAAILFSFFFLSDLSSCPCPASPRIVVSGA----G 88
MA WSS S+SPKGI +TFPVL L A ILF FFF+S+LSSC CP +PRIVVSG G
Sbjct: 1 MALWSS-STSPKGIVITFPVLLLTGFAVILFCFFFISNLSSCSCPVTPRIVVSGTAASNG 60
Query: 89 ALVGDCLLTSKADIDWVKDQIRANGLQMHDNVLRKGINPRTRAQQLGDLRQFKGISHYEG 148
A +GD +LT+K D+DW+KDQI+ANGLQMH+NVLRKGINPRTRAQQL DLRQFKGISHYEG
Sbjct: 61 AHIGDGVLTNKDDVDWLKDQIKANGLQMHENVLRKGINPRTRAQQLEDLRQFKGISHYEG 120
Query: 149 SEEQNRTILPCPGELLVEEHHSNYGEPWAGGRDVFEFLAEFSHVAPDARVLEIGCGTLRV 208
E+QNRT LPCPGELLVEEHHSNYGEPWAGGRDVFEFLAEFSH+ P+A VLEIGCGTLRV
Sbjct: 121 PEDQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEFLAEFSHITPNAHVLEIGCGTLRV 180
Query: 209 GLHFIRYLKPGHYHCLERDELSLMATFRYELPSQGLLSKRPLIVKGDNMDFTEFGSEVVY 268
GLHFIRYLK GHYHCLERDELS+MA FRYELPSQGLLSKRPLIVKG++M+F +FGSEV+Y
Sbjct: 181 GLHFIRYLKRGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMNFNKFGSEVLY 240
Query: 269 DLIYASAVFLHMPGKLVWVGLEKLANKLKPHEGRIFVSHNIKFCSRLGGEECTKRLTNLG 328
DLIYASAVFLH+P KLVWVGLE+L+NKLKP++GRIFVSHNIKFCSRLGGEECTKRLTNLG
Sbjct: 241 DLIYASAVFLHIPDKLVWVGLERLSNKLKPYDGRIFVSHNIKFCSRLGGEECTKRLTNLG 300
Query: 329 LEYVGKRTHDSLLFNHYEIWFEFKRSK 352
LEY+GKRTHDSLLFNHYEIWFEF+RSK
Sbjct: 301 LEYLGKRTHDSLLFNHYEIWFEFRRSK 326
BLAST of Sed0017257 vs. ExPASy TrEMBL
Match:
A0A5D3D8G7 (Ribosomal RNA small subunit methyltransferase A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold811G00580 PE=4 SV=1)
HSP 1 Score: 567.4 bits (1461), Expect = 4.2e-158
Identity = 271/327 (82.87%), Postives = 297/327 (90.83%), Query Frame = 0
Query: 29 MAPWSSPSSSPKGIFVTFPVLFLAAIAAILFSFFFLSDLSSCPCPASPRIVVSGA----G 88
MA WSS SSSPKGI VTFPVL L A ILF FFF+S+LSSC CP +PRIVVSG G
Sbjct: 1 MALWSS-SSSPKGIVVTFPVLLLTGFAVILFCFFFISNLSSCSCPVTPRIVVSGTAANNG 60
Query: 89 ALVGDCLLTSKADIDWVKDQIRANGLQMHDNVLRKGINPRTRAQQLGDLRQFKGISHYEG 148
+G+ +LT+K D++WVKDQI+ANGLQMH+NVLRKGINPRTRAQQL DLRQFKGISHYEG
Sbjct: 61 VHIGEGVLTNKDDVEWVKDQIKANGLQMHENVLRKGINPRTRAQQLEDLRQFKGISHYEG 120
Query: 149 SEEQNRTILPCPGELLVEEHHSNYGEPWAGGRDVFEFLAEFSHVAPDARVLEIGCGTLRV 208
E+QNRT PCPGELLVEEHHSNYGEPWAGGRDVFEFLAEFSH+ PDA VLEIGCGTLRV
Sbjct: 121 PEDQNRTAFPCPGELLVEEHHSNYGEPWAGGRDVFEFLAEFSHITPDAHVLEIGCGTLRV 180
Query: 209 GLHFIRYLKPGHYHCLERDELSLMATFRYELPSQGLLSKRPLIVKGDNMDFTEFGSEVVY 268
GLHFIRYL+ GHYHCLERDELS+MA FRYELPSQGLLSKRPLIVKG++M+F++FGSEV Y
Sbjct: 181 GLHFIRYLRRGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMNFSKFGSEVHY 240
Query: 269 DLIYASAVFLHMPGKLVWVGLEKLANKLKPHEGRIFVSHNIKFCSRLGGEECTKRLTNLG 328
DLIYASAVFLHMP KLVWVGLE+L+NKLKP++GRIFVSHNIKFCSRLGGEECTKRLTNLG
Sbjct: 241 DLIYASAVFLHMPDKLVWVGLERLSNKLKPYDGRIFVSHNIKFCSRLGGEECTKRLTNLG 300
Query: 329 LEYVGKRTHDSLLFNHYEIWFEFKRSK 352
LEY+GKRTHDSLLFNHYEIWFEF+RSK
Sbjct: 301 LEYLGKRTHDSLLFNHYEIWFEFRRSK 326
BLAST of Sed0017257 vs. TAIR 10
Match:
AT3G05100.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )
HSP 1 Score: 453.8 bits (1166), Expect = 1.3e-127
Identity = 222/333 (66.67%), Postives = 259/333 (77.78%), Query Frame = 0
Query: 32 WSSPSSSP---KGIFVTFPVLFLAAIAAILFSFFFLSDLSSCPCP----ASPRIVV---- 91
+SS SSSP KGIFV+ PVL L F S SSC CP +SP V
Sbjct: 3 FSSSSSSPAMQKGIFVSMPVLVLTVSFVAAVFFLLSSSFSSCSCPEALSSSPTDAVEASV 62
Query: 92 --SGAGALVGDCLLTSKADIDWVKDQIRANGLQMHDNVLRKGINPRTRAQQLGDLRQFKG 151
SG D + ++ DI+WV+D IR+NGL M N LRKGINPRTR QQL DL Q+KG
Sbjct: 63 GGSGGDVRFEDRISPTQDDIEWVRDLIRSNGLHMQKNELRKGINPRTRDQQLADLIQYKG 122
Query: 152 ISHYEGSEEQNRTILPCPGELLVEEHHSNYGEPWAGGRDVFEFLAEFSHVAPDARVLEIG 211
ISHYEG E N T LPCPGELLVE+HHSNYGEPWAGGRDVFEFLAE S + P++RVLEIG
Sbjct: 123 ISHYEGDEANNHTALPCPGELLVEQHHSNYGEPWAGGRDVFEFLAESSSLKPNSRVLEIG 182
Query: 212 CGTLRVGLHFIRYLKPGHYHCLERDELSLMATFRYELPSQGLLSKRPLIVKGDNMDFTEF 271
CGTLRVGLHFIRYL P H+HCLE+DELSLMA RYELPSQGLL KRPLIV+GD+M+F++F
Sbjct: 183 CGTLRVGLHFIRYLSPQHFHCLEKDELSLMAALRYELPSQGLLHKRPLIVRGDDMEFSKF 242
Query: 272 GSEVVYDLIYASAVFLHMPGKLVWVGLEKLANKLKPHEGRIFVSHNIKFCSRLGGEECTK 331
GS+ YDLIYASAVFLHMP KLVW GLE+L ++LKP++GRIFVSHN+KFCSRLG ++C++
Sbjct: 243 GSDTAYDLIYASAVFLHMPDKLVWTGLERLVDRLKPYDGRIFVSHNVKFCSRLGQDKCSQ 302
Query: 332 RLTNLGLEYVGKRTHDSLLFNHYEIWFEFKRSK 352
+L +LGLEY+GK+THDSLLFNHYEIWF F+R K
Sbjct: 303 KLASLGLEYLGKQTHDSLLFNHYEIWFGFRRFK 335
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022142977.1 | 4.7e-164 | 87.20 | uncharacterized protein LOC111012976 [Momordica charantia] | [more] |
| KAG6590086.1 | 2.2e-161 | 84.29 | hypothetical protein SDJN03_15509, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_022961141.1 | 3.8e-161 | 85.02 | uncharacterized protein LOC111461742 [Cucurbita moschata] >XP_022961142.1 unchar... | [more] |
| XP_023516022.1 | 4.9e-161 | 83.48 | uncharacterized protein LOC111780012 [Cucurbita pepo subsp. pepo] >XP_023516023.... | [more] |
| XP_022987105.1 | 6.4e-161 | 83.99 | uncharacterized protein LOC111484758 [Cucurbita maxima] >XP_022987106.1 uncharac... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1CPF7 | 2.3e-164 | 87.20 | uncharacterized protein LOC111012976 OS=Momordica charantia OX=3673 GN=LOC111012... | [more] |
| A0A6J1H9D1 | 1.8e-161 | 85.02 | uncharacterized protein LOC111461742 OS=Cucurbita moschata OX=3662 GN=LOC1114617... | [more] |
| A0A6J1JFW2 | 3.1e-161 | 83.99 | uncharacterized protein LOC111484758 OS=Cucurbita maxima OX=3661 GN=LOC111484758... | [more] |
| A0A0A0M070 | 8.5e-159 | 82.87 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G660190 PE=4 SV=1 | [more] |
| A0A5D3D8G7 | 4.2e-158 | 82.87 | Ribosomal RNA small subunit methyltransferase A OS=Cucumis melo var. makuwa OX=1... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G05100.1 | 1.3e-127 | 66.67 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | [more] |
