Sed0017197 (gene) Chayote v1

Overview


Name	Sed0017197
Type	gene
Organism	Sechium edule (Chayote v1)
Description	centromere protein S isoform X2
Location	LG01: 11116667 .. 11118899 (+)
RNA-Seq Expression	Sed0017197
Synteny	Sed0017197

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGCCGTCCCGGTTGCGAGTGCCATTTCTGGAGGGAATAAAAGGCAGATGGAAACAGATGCACCCAAGTGAAGTTGTTAAAGGCTCTTCAATGGAGACCAGGATCGAAGAAGACGACTCCACGGCCGACCTCTTGAGGGACCGATTCCGGCTCTCCACCATTTTCATCGCTGAAGCTCAAGGTTAATCATCTTCATTTTCAACGCTCTCTGATTCTACGCCTAGTACAAGCAGAATCGACAAGAGAAAGGCAAAGCATTATCCTCCGATGATTGAATGCCTACAGGGACTGTTCATGTCTGTGTTTGTCTTGCTTTAATTTTTGAACTGATTGATTTGTTTTTTCAGCGAAGAAAAGCGGCATGGAAATCTCTGAACCGGTCATGACTTGTGTCGCTGAGTTAGCCTTCAAATATACAAGTTAGTTTGCTTTCGTTTTCTGAATTTCTTGATTACGCAGTGTTATTTTGAGTACTTAGTTTCTACATGACTACATCTGATAATGTATAGATCACCGAAATTCTTGCATTCTGCATTATGTTGTTAACCTAATTGCTAATTGTTTTAATATCCATTCTCTTCTAGCTGCGTTTTCATCGTTTTAGGTAGTTTATATGCAGTTTCAATTAGAAATTTCCTTATTATTTAGCATGCATTCGGTTTGTTTGGATGCCTTTTCTGTGATTTGTAGTTAAATTTGGTGACCTAGTTTGAAGGAAACTACATAAGTTTGGTATAGTCTAAGTCAAGAAAATAGTTACGATTGCGAGTAGAACAAAGGATGGAGATACTATTATGATAACTTAGAGAATGACTTTGCACGATACGTTCGGATTCAAGTAAAATGTTCCTATCGTTCATATCAAGGGCAAAAAACATGTTCCTCATTCTACCTTGAGGCTTGCACCTTTAAGTGATCAAGTTAGGTATAAAGCTTTAACACCCTTATGATCTTGCTGGGAGTGGATGCTTCACTTGTGAAGCAAAAATGCTGTAAATCTTGAGGCTTAAGATTTGTGTGTTGCCTTGACCTTGAGGTATACCGTGGGAAGGAGAGTTCTCATCATCTTGTGTTACTTTGTTTATATTTCAATCTCGTAAAGAAGTCAGTTATTATTTTAATTTATATCTATATATTAGTTTCAAGTCCGTTTTCTGTTACAAATGAATACTTTATTCATTGTGTTAAAGAAGAAAATATATACATATATATCATATCCATTAAGTTAAGGTATTCTTTCATCATACATGTGAATGATTTGGTAGGTTTACAAGGTTTCGACCATACTTTGAGTTCAAACCATGGTGTAGGGTCATGCTTATGTTTGTAGTCACAAGACTATCATGTGAACTGCCAATAGTATAACATATGCAATGCAAGATAAACAAAGTTTTGTTTACTCTGCTGCTATGCAGCCTATGCTTGCATTGCATCTCAGGCAGCAAGAAGATGATAATTTGGTCATATTTGTGTTTCATTCGTTTTTATGATTTTCGAGGTATTGCAATGAGGTAACGGAATGGTAACTTGTGTAACAGAACAGTTGGCAAAAGACCTTGAGTTATTTGCTCATCATGGTGGTCGAAAAACTGCGAATACAGAAGACGTCATACTCTCAGGTCAGCTTGTCTGATTCCCAGCTTTGCGAGTGCTGGTATCTGCTGATCTCAGCTTGCACTCCGATTTTTCATTTGTTTTGTTGTAGTATTGTCCAGTTAGTCAATATGCAGCATACTTTTCAAGAAATTAGTACTTAATCGCTTGAACTTTATTTTGATCTCAGCCCATAGAAATGAACATCTGGCTGCCTCATTAGCATCTTTCTGCAACGATTTAAAGACAAAAGAACCTCAAAGTGGAAAACGGAAAAAGGCACCGAAAAGGGAAGATAGAGATCGAGGTGTCGTGCATATTACTGATGCATAACCACATCACCCACTTGGCAGATCTCTTGTTACAAAGGGTACATACTAAGTAATGACAATATTTTATGATTCTCTTCCTGTTTCTAGGATTCTTTTTAATATAGTGGATCATCCACCAGACTTTTGTTCTCATCTCCTTAGAACTCAAGGACAACATAGAACATATAAAGAAACCTTGTTGTTTATTGATTCCTAGGTTTCAAAATTGAACTATTTTACCTTCTTGGACTAATTTTATGTAGTTGAGAATTGAGATGGGGAATCTATAGATTACTGTCTAAAGACATGAGAACAAATCTTGTTCAAGG

mRNA sequence

AAGCCGTCCCGGTTGCGAGTGCCATTTCTGGAGGGAATAAAAGGCAGATGGAAACAGATGCACCCAAGTGAAGTTGTTAAAGGCTCTTCAATGGAGACCAGGATCGAAGAAGACGACTCCACGGCCGACCTCTTGAGGGACCGATTCCGGCTCTCCACCATTTTCATCGCTGAAGCTCAAGCGAAGAAAAGCGGCATGGAAATCTCTGAACCGGTCATGACTTGTGTCGCTGAGTTAGCCTTCAAATATACAAAACAGTTGGCAAAAGACCTTGAGTTATTTGCTCATCATGGTGGTCGAAAAACTGCGAATACAGAAGACGTCATACTCTCAGCCCATAGAAATGAACATCTGGCTGCCTCATTAGCATCTTTCTGCAACGATTTAAAGACAAAAGAACCTCAAAGTGGAAAACGGAAAAAGGCACCGAAAAGGGAAGATAGAGATCGAGGTGTCGTGCATATTACTGATGCATAACCACATCACCCACTTGGCAGATCTCTTGTTACAAAGGGTACATACTAAGTAATGACAATATTTTATGATTCTCTTCCTGTTTCTAGGATTCTTTTTAATATAGTGGATCATCCACCAGACTTTTGTTCTCATCTCCTTAGAACTCAAGGACAACATAGAACATATAAAGAAACCTTGTTGTTTATTGATTCCTAGGTTTCAAAATTGAACTATTTTACCTTCTTGGACTAATTTTATGTAGTTGAGAATTGAGATGGGGAATCTATAGATTACTGTCTAAAGACATGAGAACAAATCTTGTTCAAGG

Coding sequence (CDS)

ATGCACCCAAGTGAAGTTGTTAAAGGCTCTTCAATGGAGACCAGGATCGAAGAAGACGACTCCACGGCCGACCTCTTGAGGGACCGATTCCGGCTCTCCACCATTTTCATCGCTGAAGCTCAAGCGAAGAAAAGCGGCATGGAAATCTCTGAACCGGTCATGACTTGTGTCGCTGAGTTAGCCTTCAAATATACAAAACAGTTGGCAAAAGACCTTGAGTTATTTGCTCATCATGGTGGTCGAAAAACTGCGAATACAGAAGACGTCATACTCTCAGCCCATAGAAATGAACATCTGGCTGCCTCATTAGCATCTTTCTGCAACGATTTAAAGACAAAAGAACCTCAAAGTGGAAAACGGAAAAAGGCACCGAAAAGGGAAGATAGAGATCGAGGTGTCGTGCATATTACTGATGCATAA

Protein sequence

MHPSEVVKGSSMETRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLKTKEPQSGKRKKAPKREDRDRGVVHITDA

Homology

[Close]

BLAST of Sed0017197 vs. NCBI nr
Match: XP_022994496.1 (protein MHF1 homolog [Cucurbita maxima] >XP_023542796.1 protein MHF1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204.5 bits (519), Expect = 5.8e-49
Identity = 107/129 (82.95%), Postives = 118/129 (91.47%), Query Frame = 0


Query: 12  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKD 71
           MET +EEDDSTA+LLRDRFRLS I IAEA+AK+SGMEIS PVMTCVAELAFKYTKQLAKD
Sbjct: 1   METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKD 60

Query: 72  LELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLKTKEPQS-GKRKKAPKREDRD 131
           LELFAHHGGRK+ NTEDVILSAHRNEHLAASL+SFC++LKTKEPQS  KRKKAPK+E  D
Sbjct: 61  LELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELKTKEPQSERKRKKAPKKE--D 120

Query: 132 RGVVHITDA 140
           +  +HITDA
Sbjct: 121 KSAIHITDA 127

[Close]

BLAST of Sed0017197 vs. NCBI nr
Match: KAG7012337.1 (Protein MHF1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 204.5 bits (519), Expect = 5.8e-49
Identity = 107/129 (82.95%), Postives = 118/129 (91.47%), Query Frame = 0


Query: 12  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKD 71
           MET +EEDDSTA+LLRDRFRLS I IAEA+AK+SGMEIS PVMTCVAELAFKYTKQLAKD
Sbjct: 1   METGMEEDDSTAELLRDRFRLSAICIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKD 60

Query: 72  LELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLKTKEPQS-GKRKKAPKREDRD 131
           LELFAHHGGRK+ NTEDVILSAHRNEHLAASL+SFC++LKTKEPQS  KRKKAPK+E  D
Sbjct: 61  LELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELKTKEPQSERKRKKAPKKE--D 120

Query: 132 RGVVHITDA 140
           +  +HITDA
Sbjct: 121 KSAIHITDA 127

[Close]

BLAST of Sed0017197 vs. NCBI nr
Match: XP_004154006.1 (protein MHF1 homolog isoform X2 [Cucumis sativus] >XP_004154007.1 protein MHF1 homolog isoform X2 [Cucumis sativus] >KGN64440.1 hypothetical protein Csa_013391 [Cucumis sativus])

HSP 1 Score: 204.1 bits (518), Expect = 7.6e-49
Identity = 105/129 (81.40%), Postives = 115/129 (89.15%), Query Frame = 0


Query: 12  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKD 71
           MET +EEDDS ++LLRDRFRLS+I IAEA+A KSGMEISEPVMTCVA+LAFKYTKQLAKD
Sbjct: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYTKQLAKD 60

Query: 72  LELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLKTKEPQS-GKRKKAPKREDRD 131
           LELFA H GRK+ NTEDVIL+AHRNEHLAA L S CNDLKTKEPQS  KRKKAPK++DRD
Sbjct: 61  LELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRKKAPKKDDRD 120

Query: 132 RGVVHITDA 140
           RG VHI DA
Sbjct: 121 RGAVHIADA 129

[Close]

BLAST of Sed0017197 vs. NCBI nr
Match: XP_008440159.1 (PREDICTED: centromere protein S isoform X2 [Cucumis melo] >TYJ99282.1 centromere protein S isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 203.4 bits (516), Expect = 1.3e-48
Identity = 104/129 (80.62%), Postives = 115/129 (89.15%), Query Frame = 0


Query: 12  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKD 71
           METR+EEDDS ++LLRDRFRLSTI IAEA+A KSGMEISEPVMTCVA+LAFK+TKQLAKD
Sbjct: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTKQLAKD 60

Query: 72  LELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLKTKEPQS-GKRKKAPKREDRD 131
           LELFA H GRK+ NTEDVIL+AHRNEHLAA L S CNDLK KEPQS  KRKKAPK++DRD
Sbjct: 61  LELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDRD 120

Query: 132 RGVVHITDA 140
           RG VHI +A
Sbjct: 121 RGAVHIAEA 129

[Close]

BLAST of Sed0017197 vs. NCBI nr
Match: KAG6573152.1 (Protein MHF1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 203.0 bits (515), Expect = 1.7e-48
Identity = 106/129 (82.17%), Postives = 117/129 (90.70%), Query Frame = 0


Query: 12  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKD 71
           MET +EEDDSTA+LLRDRFRLS I IAEA+AK+SGMEIS PVMTCVAELAFKYTKQLAKD
Sbjct: 1   METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKD 60

Query: 72  LELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLKTKEPQS-GKRKKAPKREDRD 131
           LELFAHHGGRK+ NTEDVILS HRNEHLAASL+SFC++LKTKEPQS  KRKKAPK+E  D
Sbjct: 61  LELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELKTKEPQSERKRKKAPKKE--D 120

Query: 132 RGVVHITDA 140
           +  +HITDA
Sbjct: 121 KSAIHITDA 127

[Close]

BLAST of Sed0017197 vs. ExPASy Swiss-Prot
Match: Q9FI55 (Protein MHF1 homolog OS=Arabidopsis thaliana OX=3702 GN=MHF1 PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 8.5e-35
Identity = 75/117 (64.10%), Postives = 95/117 (81.20%), Query Frame = 0


Query: 15  RIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLEL 74
           +I E+ S  DL+RDRFRLS I IAEA+AKK+GMEI  PV+ CVA+LAFKY + +AKDLEL
Sbjct: 113 QIVEEYSMDDLIRDRFRLSAISIAEAEAKKNGMEIGGPVVACVADLAFKYAENVAKDLEL 172

Query: 75  FAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLKTKEPQSGKRKK--APKREDR 130
           FAHH GRK  N +DV+LSAHRN++LAASL S CN+LK KEPQS +++K  + K+ED+
Sbjct: 173 FAHHAGRKVVNMDDVVLSAHRNDNLAASLRSLCNELKAKEPQSERKRKKGSAKKEDK 229

[Close]

BLAST of Sed0017197 vs. ExPASy Swiss-Prot
Match: Q2TBR7 (Centromere protein S OS=Bos taurus OX=9913 GN=CENPS PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.4e-07
Identity = 35/103 (33.98%), Postives = 50/103 (48.54%), Query Frame = 0


Query: 37  IAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRN 96
           + E  A    M+ S+  +  ++E+ F   +  AKDLE+FA H  R T NTEDV L A R+
Sbjct: 30  LCEEVASDKDMQFSKQTIAAISEVTFGQCENFAKDLEMFARHAKRSTINTEDVKLLARRS 89

Query: 97  EHLAASLASFCNDLKTKEPQSGKRKKAPKREDRDRGVVHITDA 140
             L   +     D+     +  K KK  K ED +R  V   +A
Sbjct: 90  HSLLKYITEKNEDIAQLNLEK-KAKKKKKLEDENRNSVESAEA 131

[Close]

BLAST of Sed0017197 vs. ExPASy Swiss-Prot
Match: Q8N2Z9 (Centromere protein S OS=Homo sapiens OX=9606 GN=CENPS PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.7e-06
Identity = 37/120 (30.83%), Postives = 57/120 (47.50%), Query Frame = 0


Query: 13  ETRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDL 72
           ET  ++  S    L+     +   + E  A    M+ S+  +  ++EL F+  +  AKDL
Sbjct: 6   ETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCENFAKDL 65

Query: 73  ELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLKTKEPQSGKRKKAPKREDRDRG 132
           E+FA H  R T NTEDV L A R+     SL  +  D   +  Q    +KA K++  + G
Sbjct: 66  EMFARHAKRTTINTEDVKLLARRSN----SLLKYITDKSEEIAQINLERKAQKKKKSEDG 121

[Close]

BLAST of Sed0017197 vs. ExPASy Swiss-Prot
Match: E1BSW7 (Centromere protein S OS=Gallus gallus OX=9031 GN=CENPS PE=1 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 2.4e-05
Identity = 35/130 (26.92%), Postives = 60/130 (46.15%), Query Frame = 0


Query: 17  EEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFA 76
           E+ +     LR     +T  + +  A+  G+  S+  +  ++E+ F+  +  A+DLE+FA
Sbjct: 7   EQRELLIQRLRAAVHYTTGCLCQDVAEDKGVLFSKQTVAAISEITFRQCENFARDLEMFA 66

Query: 77  HHGGRKTANTEDVILSAHRNEHL-------AASLASFCNDLKTKEPQSGKRKKAPKREDR 136
            H  R T  +EDV L A R+  L       +  LAS   + K K+ +     K  K E+ 
Sbjct: 67  RHAKRSTITSEDVKLLARRSNSLLKYITQKSDELASSNMEQKEKKKKKSSAAKGRKTEEN 126

Query: 137 DRGVVHITDA 140
           +  V    D+
Sbjct: 127 ETPVTESEDS 136

[Close]

BLAST of Sed0017197 vs. ExPASy Swiss-Prot
Match: Q9D084 (Centromere protein S OS=Mus musculus OX=10090 GN=Cenps PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 4.1e-05
Identity = 31/85 (36.47%), Postives = 43/85 (50.59%), Query Frame = 0


Query: 47  MEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASF 106
           +  S+  +  ++E+ F+  +  AKDLE+FA H  R T  TEDV L A RN  L   +   
Sbjct: 39  VNFSKQTIAAISEVTFRQCENFAKDLEMFARHAKRSTVTTEDVKLLARRNNSLLKYITE- 98

Query: 107 CNDLKTKEPQSGKRKKAPKREDRDR 132
            N+   +    GK KK  K ED  R
Sbjct: 99  KNEEIAQLNLKGKAKKKRKPEDESR 122

[Close]

BLAST of Sed0017197 vs. ExPASy TrEMBL
Match: A0A6J1JZB0 (protein MHF1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490201 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.8e-49
Identity = 107/129 (82.95%), Postives = 118/129 (91.47%), Query Frame = 0


Query: 12  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKD 71
           MET +EEDDSTA+LLRDRFRLS I IAEA+AK+SGMEIS PVMTCVAELAFKYTKQLAKD
Sbjct: 1   METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKD 60

Query: 72  LELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLKTKEPQS-GKRKKAPKREDRD 131
           LELFAHHGGRK+ NTEDVILSAHRNEHLAASL+SFC++LKTKEPQS  KRKKAPK+E  D
Sbjct: 61  LELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELKTKEPQSERKRKKAPKKE--D 120

Query: 132 RGVVHITDA 140
           +  +HITDA
Sbjct: 121 KSAIHITDA 127

[Close]

BLAST of Sed0017197 vs. ExPASy TrEMBL
Match: A0A0A0LR97 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051770 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.7e-49
Identity = 105/129 (81.40%), Postives = 115/129 (89.15%), Query Frame = 0


Query: 12  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKD 71
           MET +EEDDS ++LLRDRFRLS+I IAEA+A KSGMEISEPVMTCVA+LAFKYTKQLAKD
Sbjct: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYTKQLAKD 60

Query: 72  LELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLKTKEPQS-GKRKKAPKREDRD 131
           LELFA H GRK+ NTEDVIL+AHRNEHLAA L S CNDLKTKEPQS  KRKKAPK++DRD
Sbjct: 61  LELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRKKAPKKDDRD 120

Query: 132 RGVVHITDA 140
           RG VHI DA
Sbjct: 121 RGAVHIADA 129

[Close]

BLAST of Sed0017197 vs. ExPASy TrEMBL
Match: A0A5D3BHQ8 (Centromere protein S isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004950 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 6.3e-49
Identity = 104/129 (80.62%), Postives = 115/129 (89.15%), Query Frame = 0


Query: 12  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKD 71
           METR+EEDDS ++LLRDRFRLSTI IAEA+A KSGMEISEPVMTCVA+LAFK+TKQLAKD
Sbjct: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTKQLAKD 60

Query: 72  LELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLKTKEPQS-GKRKKAPKREDRD 131
           LELFA H GRK+ NTEDVIL+AHRNEHLAA L S CNDLK KEPQS  KRKKAPK++DRD
Sbjct: 61  LELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDRD 120

Query: 132 RGVVHITDA 140
           RG VHI +A
Sbjct: 121 RGAVHIAEA 129

[Close]

BLAST of Sed0017197 vs. ExPASy TrEMBL
Match: A0A1S3B173 (centromere protein S isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484694 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 6.3e-49
Identity = 104/129 (80.62%), Postives = 115/129 (89.15%), Query Frame = 0


Query: 12  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKD 71
           METR+EEDDS ++LLRDRFRLSTI IAEA+A KSGMEISEPVMTCVA+LAFK+TKQLAKD
Sbjct: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTKQLAKD 60

Query: 72  LELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLKTKEPQS-GKRKKAPKREDRD 131
           LELFA H GRK+ NTEDVIL+AHRNEHLAA L S CNDLK KEPQS  KRKKAPK++DRD
Sbjct: 61  LELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDRD 120

Query: 132 RGVVHITDA 140
           RG VHI +A
Sbjct: 121 RGAVHIAEA 129

[Close]

BLAST of Sed0017197 vs. ExPASy TrEMBL
Match: A0A6J1GTB4 (protein MHF1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111457277 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.8e-48
Identity = 106/129 (82.17%), Postives = 117/129 (90.70%), Query Frame = 0


Query: 12  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKD 71
           MET +EEDDSTA+LLR RFRLS I IAEA+AK+SGMEIS PVMTCVAELAFKYTKQLAKD
Sbjct: 1   METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKD 60

Query: 72  LELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLKTKEPQS-GKRKKAPKREDRD 131
           LELFAHHGGRK+ NTEDVILSAHRNEHLAASL+SFC++LKTKEPQS  KRKKAPK+E  D
Sbjct: 61  LELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELKTKEPQSERKRKKAPKKE--D 120

Query: 132 RGVVHITDA 140
           +  +HITDA
Sbjct: 121 KSAIHITDA 127

[Close]

BLAST of Sed0017197 vs. TAIR 10
Match: AT5G50930.1 (Histone superfamily protein )

HSP 1 Score: 147.9 bits (372), Expect = 6.0e-36
Identity = 75/117 (64.10%), Postives = 95/117 (81.20%), Query Frame = 0


Query: 15  RIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLEL 74
           +I E+ S  DL+RDRFRLS I IAEA+AKK+GMEI  PV+ CVA+LAFKY + +AKDLEL
Sbjct: 113 QIVEEYSMDDLIRDRFRLSAISIAEAEAKKNGMEIGGPVVACVADLAFKYAENVAKDLEL 172

Query: 75  FAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLKTKEPQSGKRKK--APKREDR 130
           FAHH GRK  N +DV+LSAHRN++LAASL S CN+LK KEPQS +++K  + K+ED+
Sbjct: 173 FAHHAGRKVVNMDDVVLSAHRNDNLAASLRSLCNELKAKEPQSERKRKKGSAKKEDK 229

The following BLAST results are available for this feature:

BLAST of Sed0017197 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022994496.1	5.8e-49	82.95	protein MHF1 homolog [Cucurbita maxima] >XP_023542796.1 protein MHF1 homolog [Cu...	[more]
KAG7012337.1	5.8e-49	82.95	Protein MHF1-like protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_004154006.1	7.6e-49	81.40	protein MHF1 homolog isoform X2 [Cucumis sativus] >XP_004154007.1 protein MHF1 h...	[more]
XP_008440159.1	1.3e-48	80.62	PREDICTED: centromere protein S isoform X2 [Cucumis melo] >TYJ99282.1 centromere...	[more]
KAG6573152.1	1.7e-48	82.17	Protein MHF1-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0017197 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FI55	8.5e-35	64.10	Protein MHF1 homolog OS=Arabidopsis thaliana OX=3702 GN=MHF1 PE=3 SV=1	[more]
Q2TBR7	3.4e-07	33.98	Centromere protein S OS=Bos taurus OX=9913 GN=CENPS PE=2 SV=1	[more]
Q8N2Z9	3.7e-06	30.83	Centromere protein S OS=Homo sapiens OX=9606 GN=CENPS PE=1 SV=1	[more]
E1BSW7	2.4e-05	26.92	Centromere protein S OS=Gallus gallus OX=9031 GN=CENPS PE=1 SV=2	[more]
Q9D084	4.1e-05	36.47	Centromere protein S OS=Mus musculus OX=10090 GN=Cenps PE=2 SV=1	[more]

BLAST of Sed0017197 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JZB0	2.8e-49	82.95	protein MHF1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490201 PE=3 SV=1	[more]
A0A0A0LR97	3.7e-49	81.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051770 PE=3 SV=1	[more]
A0A5D3BHQ8	6.3e-49	80.62	Centromere protein S isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3B173	6.3e-49	80.62	centromere protein S isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484694 PE=3 SV=...	[more]
A0A6J1GTB4	1.8e-48	82.17	protein MHF1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111457277 PE=3 SV=1	[more]

BLAST of Sed0017197 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50930.1	6.0e-36	64.10	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029003	CENP-S/Mhf1	PFAM	PF15630	CENP-S	coord: 32..99 e-value: 4.3E-17 score: 62.3
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 6..122 e-value: 6.3E-29 score: 102.5
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 7..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..139
None	No IPR available	PANTHER	PTHR22980:SF0	CENTROMERE PROTEIN S	coord: 12..130
None	No IPR available	PANTHER	PTHR22980	CORTISTATIN	coord: 12..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017197.1	Sed0017197.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007129	homologous chromosome pairing at meiosis
biological_process	GO:0036297	interstrand cross-link repair
biological_process	GO:0006312	mitotic recombination
biological_process	GO:0031297	replication fork processing
biological_process	GO:0000712	resolution of meiotic recombination intermediates
cellular_component	GO:0071821	FANCM-MHF complex
cellular_component	GO:0043240	Fanconi anaemia nuclear complex
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0046982	protein heterodimerization activity