Sed0017190 (gene) Chayote v1

Overview


Name	Sed0017190
Type	gene
Organism	Sechium edule (Chayote v1)
Description	chromo domain-containing protein LHP1-like
Location	LG02: 51310020 .. 51314525 (+)
RNA-Seq Expression	Sed0017190
Synteny	Sed0017190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTATTAATGTTGGAGATAAATTGAAACGAAAAAAAGAGAGGGAAAGGAAAGATAAAACGAAAATGGGGAGAGGGAGGAAGAAGGCGGTGAAAAGCTCCGAGCCTGACGCATTGGCGCTTTCAATCCATGGAAATGGCGATTCAGTTCCTTCGAACTCGAACGACAATGGCGGCCAACCCATAATTGCGTCCCCATTGCAAGCTTCTTCGCTTCTCGACGCTTCTCTCCAAATTCCGCTACTCACCGACGGAACCGGAGAAGGTAGCGCCGCCGCCAACGCTTCTGCTTCCGAACCGCCAAAGCTCGATGAAGGATACTTCGAAATCGAAACTATTCGACGGAAACGAGTTCGTAAGGTATTTTGGAATTTTGCAAGATTTAGCCTCTTTTTCTCGATTAGAATGTGGATTTCTTGACGTCGGTGCACTCAATGTTCTTGAGAAATCATAGATGTTTGTTGTGAAAACGGAACAACTGAAGAATTTACGTGGTTCACTAAGTTAAGTATGTCAGGGTAGAAGAAAGAATACAAAATGTCGATTGACTACGCTAGGGTTTTAAAAGAGTTTATGTAGTGTACTCTCGTAAAACCATATTTGACCGAAATACATAAAATGCCCATATGTTATTTCGTCTAGGTTTTGGGAGTGGTGGCTCCTTGCCCTTGGGACCCTGATTCGATGACCGAGATCTCCACTTTCTGACCGGGCAGCGAGACTCCGACTAAGTAATGTTGTTATATCAAACAGTTACAATGTTTATGAGAAAGAACCTGTTTTAGTTAATTTATGATGAATTTATCTCATGCTTCAATGTACTGTGCCAATAGCTTTTCAGGTGTTTCTGTTTTCTCGGATTTATGGGTCTGATTTTATATTTTTCTTGTTTTCAATTATAGGGTCAGCTCCAGTACCTCGTCAAATGGTATGTACAATTTTGTTGTTTCCCTTTTTCGTTTATTGGTCGGTTCTTGATATACGTGAAAGTAGCTTCAGAAATTTGTGTTTGATAGGCATGGCTGGCCAGAGACGGCCAATACATGGGAACCCTCGGACAATCTCCAAGCATGCTCTGAATTTATCGAGGAATTTGAGGAAAGGATGGAAATGTATGGCTAATGAAAATGTAATTGCAACATTTCCTCACAATTAGGAACTGCACACCCTAATTCTTTGTTCATTTTTTGTAGTTCGCGATCAGGTAAGCAGCGGAAGCGCAAGCGAACGGATGGAGATAGTGATAATCAACCCCACGAGCGAAAACAGCACCGCAGCTTAGCTACTACTAGTGTCACAGAGGTTAATATTAGTTCTGTGGATGATCGTCTATTGGCCGCTCCTTTAAAAATTCTCTGTGACCTCCCTATTGGATCAGTTGATGTTGAAAATGGACATATGGATGAGAGATTTAAGGGTAGTAGAAAAGGAGATGAGTATGATCTGAAACTTATTGAGCTCAAGGATAAAACAGCAGAGGCTTCTAAAGATCCCGGCCTTGTTCATGATGATTCCAATGCTGATTGCGGGCTAGGTTCCACCCAGGGAAGTCACTCCATTGGAGCCAAGAGAAGGAAGTCTAGTAGGGTGAAAAGGTTCACCAAGGATACAACCTTGTCTGAAAACTCTGGACAAGGATCAAAACAAAATGGGGTCACGGGAAGCATCGAGCCGACTGATCGAAATGAACAATTGGGGTCCAAGAATCCTAGTTTGAGAAATGTGTCTACTATCACAAAGATTATCAAGCCTGTTGGTTATTCAGTTTCAGTATCAAATAACATTGCAGATGTAGTCGTAACCTTCTTGGCTTTGAGGTTGGTTATACAACACTAACCATACTTCCCTTGTGCTATTGAGTATTACTGTGCGTTTTCTCTATTTTTAGTCACTGGGTGAACACTTCATGTGAAAGAACATTAGCCTATGTGAATAATTTTTATATCGCTCTTTAAACCGGATAAAAGTGTCCCCAAGGCGCAACCTTGTTGGTAGAGGCTAGGGGTCTTTAAAACTCATGAGTGAGCTTAATTGTAAATTCCTTGCTGTCTTCCGAGTCGTCATTGAGGCGAACGTGGGTGCCCTTAGGTATATGTAGTAGTGAAGTTCCAATTCCCACTTTTCGAAAAAAAAAACCAACTGGGTGAAAGCATTGAAACTTAAGATCACTTGATTCCCATAGTCAAACTTCCCACCATTCACACAAAAATTGAGCTTCGTCATTGGTTAAAACTTTATTATACAATTCTTCAATTCTCTTTCCCTTGGCATCATTTTTATTGACACCGCAAACTTTGATAATTTCTTATTCTTTTTGGTTCGCTTTAAGCCGAAATTGTTAATCTCTTTCTTTTTTGCATGTAGCACTGATGGAAAAGAAGTGACTGTGAATAACAAATTTCTTAAGGTCGACAATCCACTTCTGGTAATTGATAAAAAATTCGTACTCTAGCTTACATATTTTTCTTATTTGGTTTCTGACTTACTCGTATTTAAACTACTCTCTCATTGCAGTTGATTAACTTCTACGAGCAACATCTCCGATATAATCCAACATCATGAAAGAGCTACAAGTGTATCTGACCACCACCAACTATATGGTTTACAAGCTTTAGTTTTGTAATTTTAGGTGATTCAGTTTTCAGTATATGAATTCTTGGTAGATGAAACCATTTTCTTGCTATGTTTTTCTTTTCACATGGGGATGAATGGAAAGTTATATTCTTTTTGGATATTAAAGATCCAGTCAAACAATTTAAAGACTTGCTA

mRNA sequence

CTTTTATTAATGTTGGAGATAAATTGAAACGAAAAAAAGAGAGGGAAAGGAAAGATAAAACGAAAATGGGGAGAGGGAGGAAGAAGGCGGTGAAAAGCTCCGAGCCTGACGCATTGGCGCTTTCAATCCATGGAAATGGCGATTCAGTTCCTTCGAACTCGAACGACAATGGCGGCCAACCCATAATTGCGTCCCCATTGCAAGCTTCTTCGCTTCTCGACGCTTCTCTCCAAATTCCGCTACTCACCGACGGAACCGGAGAAGGTAGCGCCGCCGCCAACGCTTCTGCTTCCGAACCGCCAAAGCTCGATGAAGGATACTTCGAAATCGAAACTATTCGACGGAAACGAGTTCGTAAGGGTCAGCTCCAGTACCTCGTCAAATGGCATGGCTGGCCAGAGACGGCCAATACATGGGAACCCTCGGACAATCTCCAAGCATGCTCTGAATTTATCGAGGAATTTGAGGAAAGGATGGAAATTTCGCGATCAGGTAAGCAGCGGAAGCGCAAGCGAACGGATGGAGATAGTGATAATCAACCCCACGAGCGAAAACAGCACCGCAGCTTAGCTACTACTAGTGTCACAGAGGTTAATATTAGTTCTGTGGATGATCGTCTATTGGCCGCTCCTTTAAAAATTCTCTGTGACCTCCCTATTGGATCAGTTGATGTTGAAAATGGACATATGGATGAGAGATTTAAGGGTAGTAGAAAAGGAGATGAGTATGATCTGAAACTTATTGAGCTCAAGGATAAAACAGCAGAGGCTTCTAAAGATCCCGGCCTTGTTCATGATGATTCCAATGCTGATTGCGGGCTAGGTTCCACCCAGGGAAGTCACTCCATTGGAGCCAAGAGAAGGAAGTCTAGTAGGGTGAAAAGGTTCACCAAGGATACAACCTTGTCTGAAAACTCTGGACAAGGATCAAAACAAAATGGGGTCACGGGAAGCATCGAGCCGACTGATCGAAATGAACAATTGGGGTCCAAGAATCCTAGTTTGAGAAATGTGTCTACTATCACAAAGATTATCAAGCCTGTTGGTTATTCAGTTTCAGTATCAAATAACATTGCAGATGTAGTCGTAACCTTCTTGGCTTTGAGCACTGATGGAAAAGAAGTGACTGTGAATAACAAATTTCTTAAGGTCGACAATCCACTTCTGTTGATTAACTTCTACGAGCAACATCTCCGATATAATCCAACATCATGAAAGAGCTACAAGTGTATCTGACCACCACCAACTATATGGTTTACAAGCTTTAGTTTTGTAATTTTAGGTGATTCAGTTTTCAGTATATGAATTCTTGGTAGATGAAACCATTTTCTTGCTATGTTTTTCTTTTCACATGGGGATGAATGGAAAGTTATATTCTTTTTGGATATTAAAGATCCAGTCAAACAATTTAAAGACTTGCTA

Coding sequence (CDS)

ATGGGGAGAGGGAGGAAGAAGGCGGTGAAAAGCTCCGAGCCTGACGCATTGGCGCTTTCAATCCATGGAAATGGCGATTCAGTTCCTTCGAACTCGAACGACAATGGCGGCCAACCCATAATTGCGTCCCCATTGCAAGCTTCTTCGCTTCTCGACGCTTCTCTCCAAATTCCGCTACTCACCGACGGAACCGGAGAAGGTAGCGCCGCCGCCAACGCTTCTGCTTCCGAACCGCCAAAGCTCGATGAAGGATACTTCGAAATCGAAACTATTCGACGGAAACGAGTTCGTAAGGGTCAGCTCCAGTACCTCGTCAAATGGCATGGCTGGCCAGAGACGGCCAATACATGGGAACCCTCGGACAATCTCCAAGCATGCTCTGAATTTATCGAGGAATTTGAGGAAAGGATGGAAATTTCGCGATCAGGTAAGCAGCGGAAGCGCAAGCGAACGGATGGAGATAGTGATAATCAACCCCACGAGCGAAAACAGCACCGCAGCTTAGCTACTACTAGTGTCACAGAGGTTAATATTAGTTCTGTGGATGATCGTCTATTGGCCGCTCCTTTAAAAATTCTCTGTGACCTCCCTATTGGATCAGTTGATGTTGAAAATGGACATATGGATGAGAGATTTAAGGGTAGTAGAAAAGGAGATGAGTATGATCTGAAACTTATTGAGCTCAAGGATAAAACAGCAGAGGCTTCTAAAGATCCCGGCCTTGTTCATGATGATTCCAATGCTGATTGCGGGCTAGGTTCCACCCAGGGAAGTCACTCCATTGGAGCCAAGAGAAGGAAGTCTAGTAGGGTGAAAAGGTTCACCAAGGATACAACCTTGTCTGAAAACTCTGGACAAGGATCAAAACAAAATGGGGTCACGGGAAGCATCGAGCCGACTGATCGAAATGAACAATTGGGGTCCAAGAATCCTAGTTTGAGAAATGTGTCTACTATCACAAAGATTATCAAGCCTGTTGGTTATTCAGTTTCAGTATCAAATAACATTGCAGATGTAGTCGTAACCTTCTTGGCTTTGAGCACTGATGGAAAAGAAGTGACTGTGAATAACAAATTTCTTAAGGTCGACAATCCACTTCTGTTGATTAACTTCTACGAGCAACATCTCCGATATAATCCAACATCATGA

Protein sequence

MGRGRKKAVKSSEPDALALSIHGNGDSVPSNSNDNGGQPIIASPLQASSLLDASLQIPLLTDGTGEGSAAANASASEPPKLDEGYFEIETIRRKRVRKGQLQYLVKWHGWPETANTWEPSDNLQACSEFIEEFEERMEISRSGKQRKRKRTDGDSDNQPHERKQHRSLATTSVTEVNISSVDDRLLAAPLKILCDLPIGSVDVENGHMDERFKGSRKGDEYDLKLIELKDKTAEASKDPGLVHDDSNADCGLGSTQGSHSIGAKRRKSSRVKRFTKDTTLSENSGQGSKQNGVTGSIEPTDRNEQLGSKNPSLRNVSTITKIIKPVGYSVSVSNNIADVVVTFLALSTDGKEVTVNNKFLKVDNPLLLINFYEQHLRYNPTS

Homology

[Close]

BLAST of Sed0017190 vs. NCBI nr
Match: KAG6597211.1 (Chromo domain protein LHP1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 484.2 bits (1245), Expect = 1.0e-132
Identity = 274/416 (65.87%), Postives = 319/416 (76.68%), Query Frame = 0


Query: 1   MGRGRKKAVKSSEPDALALSIHG-------NGDSVPSNSNDNGGQPIIASPLQASSLLDA 60
           MGRG+KKAV SSE +A+AL + G       NGDS PSNSN+NG + II+S   ASS+ ++
Sbjct: 1   MGRGKKKAVGSSETEAMALPVPGFTDSTLVNGDSAPSNSNNNGNELIISSRFPASSIQNS 60

Query: 61  SLQIPLLT----DGTGEGSAAANASASEPPKLDEGYFEIETIRRKRVRKGQLQYLVKWHG 120
           S+Q PLL     +  GE +A A+ +ASE  KLD+G+F +E IRRKRVRKGQLQYLVKWHG
Sbjct: 61  SVQTPLLAGEGGEVHGEENAVADVTASELTKLDDGFFVVEAIRRKRVRKGQLQYLVKWHG 120

Query: 121 WPETANTWEPSDNLQACSEFIEEFEERMEISRSGKQRKRKRTDGDSDNQPHERKQHRSLA 180
           WPETANTWEP DNLQ+C+EFIEEFE+RMEISRSGKQRKRKR DGD +NQ  E KQ+R +A
Sbjct: 121 WPETANTWEPWDNLQSCAEFIEEFEKRMEISRSGKQRKRKRKDGDGNNQLQEEKQYRVIA 180

Query: 181 TTSVTEVNISSVDDRLLAAPLK--ILCDLP--------IGSVDVENGHMDERFKGSRKGD 240
           T +VT V +S+VDD L A PL   I  DLP         G+ +VENG M E+F GSR+ D
Sbjct: 181 TDNVTNVYMSTVDDCLSATPLNSIIHYDLPTPQVLIDSTGTFNVENGDMGEKFDGSRRRD 240

Query: 241 EYDLKLIELK----------DKTAEASKDPGLVHDDSNADCGLGSTQGSHSIGAKRRKSS 300
           EYDLKLIELK          D  AE+SKD GLV+DDS ADC +GSTQGSHSIGAKRRKSS
Sbjct: 241 EYDLKLIELKAAISANMVDSDNKAESSKDLGLVYDDSKADCAVGSTQGSHSIGAKRRKSS 300

Query: 301 RVKRFTKDTTLSENSGQGSKQNGVTGSIEPTDRNEQLGSKNPSL----RNVSTITKIIKP 360
           RVKRFTK+   SENS Q  KQNG+  ++EPTD+NEQLG +NPSL    RNV+TI +IIKP
Sbjct: 301 RVKRFTKEAVSSENSEQRLKQNGIAVNMEPTDQNEQLGPENPSLSGHSRNVATIRRIIKP 360

Query: 361 VGYSVSVSNNIADVVVTFLALSTDGKEVTVNNKFLKVDNPLLLINFYEQHLRYNPT 382
           VGYSVSVSNNI DVVVTFLA+ +DGKEVTVNNKFLK +NPLLLINFYEQHLRYNPT
Sbjct: 361 VGYSVSVSNNIPDVVVTFLAVRSDGKEVTVNNKFLKANNPLLLINFYEQHLRYNPT 416

[Close]

BLAST of Sed0017190 vs. NCBI nr
Match: XP_022950639.1 (chromo domain-containing protein LHP1-like [Cucurbita moschata])

HSP 1 Score: 481.9 bits (1239), Expect = 5.2e-132
Identity = 273/416 (65.62%), Postives = 318/416 (76.44%), Query Frame = 0


Query: 1   MGRGRKKAVKSSEPDALALSIHG-------NGDSVPSNSNDNGGQPIIASPLQASSLLDA 60
           MGRG+KKAV SSE +A+AL + G       NGDS PSNSN+NG +  I+S   ASS+ ++
Sbjct: 1   MGRGKKKAVGSSETEAMALPVPGFTDSTLVNGDSAPSNSNNNGNELKISSRFPASSIQNS 60

Query: 61  SLQIPLLT----DGTGEGSAAANASASEPPKLDEGYFEIETIRRKRVRKGQLQYLVKWHG 120
           S+Q PLL     +  GE +A A+ +ASE  KLD+G+F +E IRRKRVRKGQLQYLVKWHG
Sbjct: 61  SVQTPLLAGEGGEVHGEENAVADVTASELTKLDDGFFVVEAIRRKRVRKGQLQYLVKWHG 120

Query: 121 WPETANTWEPSDNLQACSEFIEEFEERMEISRSGKQRKRKRTDGDSDNQPHERKQHRSLA 180
           WPETANTWEP DNLQ+C+EFIEEFE+RMEISRSGKQRKRKR DGD +NQ  E KQ+R +A
Sbjct: 121 WPETANTWEPWDNLQSCAEFIEEFEKRMEISRSGKQRKRKRKDGDGNNQLQEEKQYRVIA 180

Query: 181 TTSVTEVNISSVDDRLLAAPLK--ILCDLP--------IGSVDVENGHMDERFKGSRKGD 240
           T +VT V +S+VDD L A PL   I  DLP         G+ +VENG M E+F GSR+ D
Sbjct: 181 TDNVTNVYMSTVDDCLSATPLNSIIHYDLPTPQVLIDSTGTFNVENGDMGEKFDGSRRRD 240

Query: 241 EYDLKLIELK----------DKTAEASKDPGLVHDDSNADCGLGSTQGSHSIGAKRRKSS 300
           EYDLKLIELK          DK AE+SKD GLV+DDS ADC +GSTQGSHSIGAKRRKSS
Sbjct: 241 EYDLKLIELKAAISANMVDSDKKAESSKDLGLVYDDSKADCAVGSTQGSHSIGAKRRKSS 300

Query: 301 RVKRFTKDTTLSENSGQGSKQNGVTGSIEPTDRNEQLGSKNPSL----RNVSTITKIIKP 360
           RVKRFTK+   SENS    KQNG+  ++EPTD+NEQLG +NPSL    RNV+TI +IIKP
Sbjct: 301 RVKRFTKEAVSSENSDHRLKQNGIAVNMEPTDQNEQLGPENPSLSGHSRNVATIRRIIKP 360

Query: 361 VGYSVSVSNNIADVVVTFLALSTDGKEVTVNNKFLKVDNPLLLINFYEQHLRYNPT 382
           VGYSVSVSNNI DVVVTFLA+ +DGKEVTVNNKFLK +NPLLLINFYEQHLRYNPT
Sbjct: 361 VGYSVSVSNNIPDVVVTFLAVRSDGKEVTVNNKFLKANNPLLLINFYEQHLRYNPT 416

[Close]

BLAST of Sed0017190 vs. NCBI nr
Match: XP_023540194.1 (chromo domain-containing protein LHP1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 479.9 bits (1234), Expect = 2.0e-131
Identity = 273/416 (65.62%), Postives = 316/416 (75.96%), Query Frame = 0


Query: 1   MGRGRKKAVKSSEPDALALSIHG-------NGDSVPSNSNDNGGQPIIASPLQASSLLDA 60
           MGRG+KKAV SSE +A+AL + G       NGDS PSNSN+NG + II+S   A S+ ++
Sbjct: 1   MGRGKKKAVGSSETEAMALPVPGFTDSTLVNGDSAPSNSNNNGNELIISSRFPAFSIQNS 60

Query: 61  SLQIPLLT----DGTGEGSAAANASASEPPKLDEGYFEIETIRRKRVRKGQLQYLVKWHG 120
           S+Q PLL     +  GE +A A+ +ASE  KLD+G+F +E IRRKRVRKGQLQYLVKWHG
Sbjct: 61  SVQTPLLAGEGGEVNGEENAVADVTASELTKLDDGFFVVEAIRRKRVRKGQLQYLVKWHG 120

Query: 121 WPETANTWEPSDNLQACSEFIEEFEERMEISRSGKQRKRKRTDGDSDNQPHERKQHRSLA 180
           WPETANTWEP DNLQ+C+EFIEEFE+RMEISRSGKQRKRKR DGD +NQ  E KQ+R +A
Sbjct: 121 WPETANTWEPWDNLQSCAEFIEEFEKRMEISRSGKQRKRKRKDGDGNNQLQEEKQYRVIA 180

Query: 181 TTSVTEVNISSVDDRLLAAPLK--ILCDLPIGSV--------DVENGHMDERFKGSRKGD 240
           T +VT V +S+VDD L A PL   I  DLP   V        +VENG M E+F GSR  D
Sbjct: 181 TDNVTNVYMSTVDDCLSATPLNSIIHYDLPTPQVLIDSTATFNVENGDMGEKFDGSRTRD 240

Query: 241 EYDLKLIELK----------DKTAEASKDPGLVHDDSNADCGLGSTQGSHSIGAKRRKSS 300
           EYDLKLIELK          D  AE+SKD GLV+DDS ADC +GSTQGSHSIGAKRRKSS
Sbjct: 241 EYDLKLIELKAAISANMVDSDNKAESSKDLGLVYDDSKADCAVGSTQGSHSIGAKRRKSS 300

Query: 301 RVKRFTKDTTLSENSGQGSKQNGVTGSIEPTDRNEQLGSKNPSL----RNVSTITKIIKP 360
           RVKRFTK+   SENS Q  KQNG+  ++EPTD+NEQLG +NPSL    RNV+TI +IIKP
Sbjct: 301 RVKRFTKEAVSSENSEQRLKQNGIAVNMEPTDQNEQLGPENPSLSGHSRNVATIRRIIKP 360

Query: 361 VGYSVSVSNNIADVVVTFLALSTDGKEVTVNNKFLKVDNPLLLINFYEQHLRYNPT 382
           VGYSVSVSNNI DVVVTFLA+ +DGKEVTVNNKFLK +NPLLLINFYEQHLRYNPT
Sbjct: 361 VGYSVSVSNNIPDVVVTFLAVRSDGKEVTVNNKFLKANNPLLLINFYEQHLRYNPT 416

[Close]

BLAST of Sed0017190 vs. NCBI nr
Match: KAG7028682.1 (Chromo domain protein LHP1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 475.7 bits (1223), Expect = 3.7e-130
Identity = 274/426 (64.32%), Postives = 318/426 (74.65%), Query Frame = 0


Query: 1   MGRGRKKAVKSSEPDALALSIHG-------NGDSVPSNSNDNGGQPIIASPLQASSLLDA 60
           MGRG+KKAV SSE +A+AL + G       NGDS PSNSN+NG + II S   ASS+ ++
Sbjct: 1   MGRGKKKAVGSSETEAMALPVPGFTDSTLVNGDSAPSNSNNNGNELIIPSRFPASSIQNS 60

Query: 61  SLQIPLLT----DGTGEGSAAANASASEPPKLDEGYFEIETIRRKRVRKGQLQYLVKW-- 120
           S+Q PLL     +  GE +A A+ +ASE  KLD+G+F +E IRRKRVRKGQLQYLVKW  
Sbjct: 61  SVQTPLLAGEGGEVHGEENAVADVTASELTKLDDGFFVVEAIRRKRVRKGQLQYLVKWYL 120

Query: 121 --------HGWPETANTWEPSDNLQACSEFIEEFEERMEISRSGKQRKRKRTDGDSDNQP 180
                   HGWPETANTWEP DNLQ+C+EFIEEFE+RMEISRSGKQRKRKR DGD +NQ 
Sbjct: 121 RQKNFVDRHGWPETANTWEPWDNLQSCAEFIEEFEKRMEISRSGKQRKRKRKDGDGNNQL 180

Query: 181 HERKQHRSLATTSVTEVNISSVDDRLLAAPLK--ILCDLP--------IGSVDVENGHMD 240
            E KQ+R +AT +VT V +S+VDD L A PL   I  DLP         G+ +VENG M 
Sbjct: 181 QEEKQYRVIATDNVTNVYMSTVDDCLSATPLNSIIHYDLPTPQVLIDSTGTFNVENGDMG 240

Query: 241 ERFKGSRKGDEYDLKLIELK----------DKTAEASKDPGLVHDDSNADCGLGSTQGSH 300
           E+F GSR+ DEYDLKLIELK          D  AE+SKD GLV+DDS ADCG+GSTQGSH
Sbjct: 241 EKFDGSRRRDEYDLKLIELKAAISANMVDSDNKAESSKDLGLVYDDSKADCGVGSTQGSH 300

Query: 301 SIGAKRRKSSRVKRFTKDTTLSENSGQGSKQNGVTGSIEPTDRNEQLGSKNPSL----RN 360
           SIGAKRRKSSRVKRFTK+   SENS Q  K NG+  ++EPTD+NEQLG +NPSL    RN
Sbjct: 301 SIGAKRRKSSRVKRFTKEAVSSENSEQRLKHNGIAVNMEPTDQNEQLGPENPSLSGHSRN 360

Query: 361 VSTITKIIKPVGYSVSVSNNIADVVVTFLALSTDGKEVTVNNKFLKVDNPLLLINFYEQH 382
           V+TI +IIKPVGYSVSVSNNI DVVVTFLA+ +DGKEVTVNNKFLK +NPLLLINFYEQH
Sbjct: 361 VATIRRIIKPVGYSVSVSNNIPDVVVTFLAVRSDGKEVTVNNKFLKANNPLLLINFYEQH 420

[Close]

BLAST of Sed0017190 vs. NCBI nr
Match: XP_022974186.1 (chromo domain-containing protein LHP1-like [Cucurbita maxima] >XP_022975510.1 chromo domain-containing protein LHP1-like [Cucurbita maxima])

HSP 1 Score: 475.3 bits (1222), Expect = 4.9e-130
Identity = 269/416 (64.66%), Postives = 316/416 (75.96%), Query Frame = 0


Query: 1   MGRGRKKAVKSSEPDALALSIHG-------NGDSVPSNSNDNGGQPIIASPLQASSLLDA 60
           MGRG+KKAV SSE +A+AL + G       NGDS PSNSN+NG + +I+S   ASS+ ++
Sbjct: 1   MGRGKKKAVGSSETEAMALPVPGFTDSTLVNGDSAPSNSNNNGNELLISSRFPASSIQNS 60

Query: 61  SLQIPLLT----DGTGEGSAAANASASEPPKLDEGYFEIETIRRKRVRKGQLQYLVKWHG 120
           S+Q PLL     +  GE +A A+ +ASE  KLD+G+F +E IRRKRVRKGQLQYLVKWHG
Sbjct: 61  SVQTPLLAGEGGEVNGEENAVADVTASELTKLDDGFFVVEAIRRKRVRKGQLQYLVKWHG 120

Query: 121 WPETANTWEPSDNLQACSEFIEEFEERMEISRSGKQRKRKRTDGDSDNQPHERKQHRSLA 180
           WPETANTWEP DNLQ+C+EFIEEFE+RMEISRSGKQRKRKR DGD +NQ  E KQ+R +A
Sbjct: 121 WPETANTWEPWDNLQSCAEFIEEFEKRMEISRSGKQRKRKRKDGDGNNQLQEEKQYRVIA 180

Query: 181 TTSVTEVNISSVDDRLLAAPLK--ILCDLP--------IGSVDVENGHMDERFKGSRKGD 240
           T +VT V +S+VDD L A PL   I  DLP         G+ +VENG M E+F GSRK D
Sbjct: 181 TDNVTNVYMSTVDDCLSATPLNSIIHYDLPTPQVLIDSTGTFNVENGDMGEKFDGSRKRD 240

Query: 241 EYDLKLIEL----------KDKTAEASKDPGLVHDDSNADCGLGSTQGSHSIGAKRRKSS 300
           EYDLKL+EL           D  AE+SKD GLV+DDS ADC +GSTQGSHSIGAKRRKSS
Sbjct: 241 EYDLKLVELNAAISANMVDSDNKAESSKDLGLVYDDSKADCAVGSTQGSHSIGAKRRKSS 300

Query: 301 RVKRFTKDTTLSENSGQGSKQNGVTGSIEPTDRNEQLGSKNPSL----RNVSTITKIIKP 360
           RVKRFTK+   +ENS Q  KQNGVT ++   D+NEQ+G +NPSL    RNV+TI +IIKP
Sbjct: 301 RVKRFTKEAASAENSEQRLKQNGVTVNMGAIDQNEQMGPENPSLSGHSRNVATIRRIIKP 360

Query: 361 VGYSVSVSNNIADVVVTFLALSTDGKEVTVNNKFLKVDNPLLLINFYEQHLRYNPT 382
           VGYSVSVSNNI DVVVTFLA+ +DGKEVTVNNKFLK +NPLLLINFYEQHLRYNPT
Sbjct: 361 VGYSVSVSNNIPDVVVTFLAVRSDGKEVTVNNKFLKANNPLLLINFYEQHLRYNPT 416

[Close]

BLAST of Sed0017190 vs. ExPASy Swiss-Prot
Match: Q946J8 (Chromo domain-containing protein LHP1 OS=Arabidopsis thaliana OX=3702 GN=LHP1 PE=1 SV=2)

HSP 1 Score: 191.0 bits (484), Expect = 2.4e-47
Identity = 143/367 (38.96%), Postives = 202/367 (55.04%), Query Frame = 0


Query: 62  DGTGEGSAAANASASEPPKLDEGYFEIETIRRKRVRKGQLQYLVKWHGWPETANTWEPSD 121
           +G GEG         E PKLDEG++EIE IRRKRVRKG++QYL+KW GWPETANTWEP +
Sbjct: 90  EGEGEG------GQEERPKLDEGFYEIEAIRRKRVRKGKVQYLIKWRGWPETANTWEPLE 149

Query: 122 NLQACSEFIEEFEERMEISRSGKQRKRKRTDGDSDNQPHERKQHRSLATT----SVTEVN 181
           NLQ+ ++ I+ FE  ++  + G++RKRK     S  +  +R    S   T    S T +N
Sbjct: 150 NLQSIADVIDAFEGSLKPGKPGRKRKRKYAGPHSQMKKKQRLTSTSHDATEKSDSSTSLN 209

Query: 182 ISSVDDRLLAAPLKIL-CDLPIGSVDVENGHMDERFKGSRKGDEYDLKLIELKDKTAEAS 241
            SS+ D  +  PL +    L    V+ +N ++  + + +  G     + + L D   E  
Sbjct: 210 NSSLPD--IPDPLDLSGSSLLNRDVEAKNAYVSNQVE-ANSGSVGMARQVRLIDN--EKE 269

Query: 242 KDP------GLVHDDSNADC----GLGS------------------TQGSHSIGAKRRKS 301
            DP      G V++ + A C    G+GS                   + S  IGAKRRKS
Sbjct: 270 YDPTLNELRGPVNNSNGAGCSQGGGIGSEGDNVRPNGLLKVYPKELDKNSRFIGAKRRKS 329

Query: 302 SRVKRFTKDTTLSENSGQGSKQNGVTGSIEPTD---RNEQLGSKNPSLR---NVS----- 361
             VKRF +D + S N    + QN +T  +   D   R  ++G++ P +    N+S     
Sbjct: 330 GSVKRFKQDGSTSNNHTAPTDQN-LTPDLTTLDSFGRIARMGNEYPGVMENCNLSQKTKI 389

Query: 362 ---TITKIIKPVGYSVSVSNNIADVVVTFLALSTDGKEVTVNNKFLKVDNPLLLINFYEQ 382
               ITKI+KP+ ++ SVS+N+ +V+VTFLAL +DGKE  V+N+FLK  NP LLI FYEQ
Sbjct: 390 EELDITKILKPMSFTASVSDNVQEVLVTFLALRSDGKEALVDNRFLKAHNPHLLIEFYEQ 444

[Close]

BLAST of Sed0017190 vs. ExPASy Swiss-Prot
Match: Q944N1 (Chromo domain protein LHP1 OS=Solanum lycopersicum OX=4081 GN=LHP1 PE=1 SV=2)

HSP 1 Score: 186.0 bits (471), Expect = 7.7e-46
Identity = 131/349 (37.54%), Postives = 197/349 (56.45%), Query Frame = 0


Query: 52  DASLQIPLLTDGTGEGSAAANASASEPPKLDEGYFEIETIRRKRVRKGQLQYLVKWHGWP 111
           D + ++  +  G G+G A         PKL EG++EIET+RR+R  KG++ YL+KW GWP
Sbjct: 64  DEAPEVVRVEKGDGDGVA-----KKVKPKLAEGFYEIETVRRRRTVKGKVYYLIKWRGWP 123

Query: 112 ETANTWEPSDNLQACSEFIEEFEERMEISRSGKQRKRKRTDGDSDNQPHERKQHR---SL 171
           E+ANTWEP  NL +C++ I+ +EE +   +SGK R+RKR  G +   P  ++Q R    +
Sbjct: 124 ESANTWEPETNLSSCTDIIDAYEESL---KSGKLRRRKRKFGATQTHPMIKQQRRFSAPV 183

Query: 172 ATTSVTEVNISSVDDRLLAAPLKIL--CDLPIGSVDVENGHMDERFKGS----RKGDEYD 231
           AT +   V +  +++   + PL +L   DL   +    N  +DE   G+    R+ +E +
Sbjct: 184 ATYNGPAVKVRIIEEPTPSPPLNVLKATDLVDSNGSELNSKVDEVVNGNGLRLREQNELN 243

Query: 232 LKLIELKDKTAEAS-----KDPGLVHDDSNADCGLGSTQGSHSIGAKRRKSSRVKRFTKD 291
           LKL ELK  T+           GL +     + G    Q     GAK+RKS  V+RF ++
Sbjct: 244 LKLSELKGATSTNGNPVDISGNGLTNGFPKVN-GAEFYQSDRCTGAKKRKSGCVRRFKRE 303

Query: 292 TTLSENSGQGSKQNGVTGSIEPTDRNEQLGSKNPSL-----RNVSTITKIIKPVGYSVSV 351
           TT   ++ +   Q+ + G   P     Q GS N  +     ++  TIT+++ PV Y  S 
Sbjct: 304 TT---SAVKDDTQDALAGG--PLATFMQDGSHNHVMVADDSKDGYTITQLVNPVSYKASF 363

Query: 352 SNNIADVVVTFLALSTDGKEVTVNNKFLKVDNPLLLINFYEQHLRYNPT 382
           SN++ DV VTF+A   DG  V V+NKFLK++NPLLLINFYE+++RY+PT
Sbjct: 364 SNDMLDVSVTFVAKRADGNLVLVDNKFLKMNNPLLLINFYEENMRYHPT 398

[Close]

BLAST of Sed0017190 vs. ExPASy Swiss-Prot
Match: Q339W7 (Probable chromo domain-containing protein LHP1 OS=Oryza sativa subsp. japonica OX=39947 GN=LHP1 PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.6e-43
Identity = 126/332 (37.95%), Postives = 174/332 (52.41%), Query Frame = 0


Query: 66  EGSAAANASASEPPKLDEGYFEIETIRRKRVRKGQLQYLVKWHGWPETANTWEPSDNLQA 125
           E  AAA      PPKL EGY+EIE IRR+R+RKG+LQYLVKW GWPE+ANTWEP +NL A
Sbjct: 87  EAEAAAPVVDGSPPKLAEGYYEIEDIRRRRLRKGKLQYLVKWRGWPESANTWEPLENLSA 146

Query: 126 CSEFIEEFEERMEISRSGKQRKRK--RTDGDSDNQPH--------ERKQHRSLATTSVTE 185
           CS+ I+ FE R++  R G++RKRK   T     N  H        + K H         +
Sbjct: 147 CSDIIDAFEMRLQSPRPGRKRKRKITTTPVAGSNPSHGKRGRPRLDAKSHTRAPAPEPKQ 206

Query: 186 VNISSVDDRLLAAPLKILCDLPIGSVDVENGHMDERFK--GSRKGDEYDLKLIELKDKTA 245
           +   +   R      K +  L      V N       +   S        + + L  +  
Sbjct: 207 LPCRTSCRRATNCSSKTVAGLDASGSVVRNQLAQNIVQEGSSSVISRTPCQELPLSIRLT 266

Query: 246 EASKDPGLVHDDSNAD--CGLGSTQGSHSIGAKRRKSSRVKRFTKDTTLSENSGQGS-KQ 305
           +   +  LV+  SN++    +  +QG    GAK+RKS  V+RF ++       GQG    
Sbjct: 267 DQQNEHHLVNGSSNSENLVKVPPSQGGQVTGAKKRKSGNVRRFEQN---KPTQGQGECGA 326

Query: 306 NGVTGSIEPTDRNEQLGSKNPSLRNVSTITKIIKPVGYSVSVSNNIADVVVTFLALSTDG 365
             V   +  T+       K     N   ITKIIKPV ++ +V+N++  V +TF AL +DG
Sbjct: 327 LVVAEDVGSTEGETGDKKKTEGCPNRVHITKIIKPVRFAAAVNNDVQQVSITFKALRSDG 386

Query: 366 KEVTVNNKFLKVDNPLLLINFYEQHLRYNPTS 383
           +EV V++K LK +NPLLLI++YEQ LRYNPTS
Sbjct: 387 QEVMVDDKELKANNPLLLISYYEQCLRYNPTS 415

[Close]

BLAST of Sed0017190 vs. ExPASy Swiss-Prot
Match: O95931 (Chromobox protein homolog 7 OS=Homo sapiens OX=9606 GN=CBX7 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.0e-09
Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 0


Query: 81  LDEGYFEIETIRRKRVRKGQLQYLVKWHGWPETANTWEPSDNLQACSEFIEEFEERMEIS 140
           + E  F +E+IR+KRVRKG+++YLVKW GWP   +TWEP +++      +  +EE+ E  
Sbjct: 6   IGEQVFAVESIRKKRVRKGKVEYLVKWKGWPPKYSTWEPEEHI-LDPRLVMAYEEKEERD 65

Query: 141 RSGKQRKR 149
           R+   RKR
Sbjct: 66  RASGYRKR 72

[Close]

BLAST of Sed0017190 vs. ExPASy Swiss-Prot
Match: Q8VDS3 (Chromobox protein homolog 7 OS=Mus musculus OX=10090 GN=Cbx7 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.0e-09
Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 0


Query: 81  LDEGYFEIETIRRKRVRKGQLQYLVKWHGWPETANTWEPSDNLQACSEFIEEFEERMEIS 140
           + E  F +E+IR+KRVRKG+++YLVKW GWP   +TWEP +++      +  +EE+ E  
Sbjct: 6   IGEQVFAVESIRKKRVRKGKVEYLVKWKGWPPKYSTWEPEEHI-LDPRLVMAYEEKEERD 65

Query: 141 RSGKQRKR 149
           R+   RKR
Sbjct: 66  RASGYRKR 72

[Close]

BLAST of Sed0017190 vs. ExPASy TrEMBL
Match: A0A6J1GGE8 (chromo domain-containing protein LHP1-like OS=Cucurbita moschata OX=3662 GN=LOC111453676 PE=4 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 2.5e-132
Identity = 273/416 (65.62%), Postives = 318/416 (76.44%), Query Frame = 0


Query: 1   MGRGRKKAVKSSEPDALALSIHG-------NGDSVPSNSNDNGGQPIIASPLQASSLLDA 60
           MGRG+KKAV SSE +A+AL + G       NGDS PSNSN+NG +  I+S   ASS+ ++
Sbjct: 1   MGRGKKKAVGSSETEAMALPVPGFTDSTLVNGDSAPSNSNNNGNELKISSRFPASSIQNS 60

Query: 61  SLQIPLLT----DGTGEGSAAANASASEPPKLDEGYFEIETIRRKRVRKGQLQYLVKWHG 120
           S+Q PLL     +  GE +A A+ +ASE  KLD+G+F +E IRRKRVRKGQLQYLVKWHG
Sbjct: 61  SVQTPLLAGEGGEVHGEENAVADVTASELTKLDDGFFVVEAIRRKRVRKGQLQYLVKWHG 120

Query: 121 WPETANTWEPSDNLQACSEFIEEFEERMEISRSGKQRKRKRTDGDSDNQPHERKQHRSLA 180
           WPETANTWEP DNLQ+C+EFIEEFE+RMEISRSGKQRKRKR DGD +NQ  E KQ+R +A
Sbjct: 121 WPETANTWEPWDNLQSCAEFIEEFEKRMEISRSGKQRKRKRKDGDGNNQLQEEKQYRVIA 180

Query: 181 TTSVTEVNISSVDDRLLAAPLK--ILCDLP--------IGSVDVENGHMDERFKGSRKGD 240
           T +VT V +S+VDD L A PL   I  DLP         G+ +VENG M E+F GSR+ D
Sbjct: 181 TDNVTNVYMSTVDDCLSATPLNSIIHYDLPTPQVLIDSTGTFNVENGDMGEKFDGSRRRD 240

Query: 241 EYDLKLIELK----------DKTAEASKDPGLVHDDSNADCGLGSTQGSHSIGAKRRKSS 300
           EYDLKLIELK          DK AE+SKD GLV+DDS ADC +GSTQGSHSIGAKRRKSS
Sbjct: 241 EYDLKLIELKAAISANMVDSDKKAESSKDLGLVYDDSKADCAVGSTQGSHSIGAKRRKSS 300

Query: 301 RVKRFTKDTTLSENSGQGSKQNGVTGSIEPTDRNEQLGSKNPSL----RNVSTITKIIKP 360
           RVKRFTK+   SENS    KQNG+  ++EPTD+NEQLG +NPSL    RNV+TI +IIKP
Sbjct: 301 RVKRFTKEAVSSENSDHRLKQNGIAVNMEPTDQNEQLGPENPSLSGHSRNVATIRRIIKP 360

Query: 361 VGYSVSVSNNIADVVVTFLALSTDGKEVTVNNKFLKVDNPLLLINFYEQHLRYNPT 382
           VGYSVSVSNNI DVVVTFLA+ +DGKEVTVNNKFLK +NPLLLINFYEQHLRYNPT
Sbjct: 361 VGYSVSVSNNIPDVVVTFLAVRSDGKEVTVNNKFLKANNPLLLINFYEQHLRYNPT 416

[Close]

BLAST of Sed0017190 vs. ExPASy TrEMBL
Match: A0A6J1IGX1 (chromo domain-containing protein LHP1-like OS=Cucurbita maxima OX=3661 GN=LOC111474921 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 2.4e-130
Identity = 269/416 (64.66%), Postives = 316/416 (75.96%), Query Frame = 0


Query: 1   MGRGRKKAVKSSEPDALALSIHG-------NGDSVPSNSNDNGGQPIIASPLQASSLLDA 60
           MGRG+KKAV SSE +A+AL + G       NGDS PSNSN+NG + +I+S   ASS+ ++
Sbjct: 1   MGRGKKKAVGSSETEAMALPVPGFTDSTLVNGDSAPSNSNNNGNELLISSRFPASSIQNS 60

Query: 61  SLQIPLLT----DGTGEGSAAANASASEPPKLDEGYFEIETIRRKRVRKGQLQYLVKWHG 120
           S+Q PLL     +  GE +A A+ +ASE  KLD+G+F +E IRRKRVRKGQLQYLVKWHG
Sbjct: 61  SVQTPLLAGEGGEVNGEENAVADVTASELTKLDDGFFVVEAIRRKRVRKGQLQYLVKWHG 120

Query: 121 WPETANTWEPSDNLQACSEFIEEFEERMEISRSGKQRKRKRTDGDSDNQPHERKQHRSLA 180
           WPETANTWEP DNLQ+C+EFIEEFE+RMEISRSGKQRKRKR DGD +NQ  E KQ+R +A
Sbjct: 121 WPETANTWEPWDNLQSCAEFIEEFEKRMEISRSGKQRKRKRKDGDGNNQLQEEKQYRVIA 180

Query: 181 TTSVTEVNISSVDDRLLAAPLK--ILCDLP--------IGSVDVENGHMDERFKGSRKGD 240
           T +VT V +S+VDD L A PL   I  DLP         G+ +VENG M E+F GSRK D
Sbjct: 181 TDNVTNVYMSTVDDCLSATPLNSIIHYDLPTPQVLIDSTGTFNVENGDMGEKFDGSRKRD 240

Query: 241 EYDLKLIEL----------KDKTAEASKDPGLVHDDSNADCGLGSTQGSHSIGAKRRKSS 300
           EYDLKL+EL           D  AE+SKD GLV+DDS ADC +GSTQGSHSIGAKRRKSS
Sbjct: 241 EYDLKLVELNAAISANMVDSDNKAESSKDLGLVYDDSKADCAVGSTQGSHSIGAKRRKSS 300

Query: 301 RVKRFTKDTTLSENSGQGSKQNGVTGSIEPTDRNEQLGSKNPSL----RNVSTITKIIKP 360
           RVKRFTK+   +ENS Q  KQNGVT ++   D+NEQ+G +NPSL    RNV+TI +IIKP
Sbjct: 301 RVKRFTKEAASAENSEQRLKQNGVTVNMGAIDQNEQMGPENPSLSGHSRNVATIRRIIKP 360

Query: 361 VGYSVSVSNNIADVVVTFLALSTDGKEVTVNNKFLKVDNPLLLINFYEQHLRYNPT 382
           VGYSVSVSNNI DVVVTFLA+ +DGKEVTVNNKFLK +NPLLLINFYEQHLRYNPT
Sbjct: 361 VGYSVSVSNNIPDVVVTFLAVRSDGKEVTVNNKFLKANNPLLLINFYEQHLRYNPT 416

[Close]

BLAST of Sed0017190 vs. ExPASy TrEMBL
Match: A0A6J1EA84 (chromo domain-containing protein LHP1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432131 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 4.9e-120
Identity = 260/418 (62.20%), Postives = 301/418 (72.01%), Query Frame = 0


Query: 1   MGRGRKKAVKSSEPDALAL-------SIHGNGDSVPSNSNDNGGQPIIASPLQASSLLDA 60
           MGR +KKA  SSEP+ + L       S H NGDS  S  NDNG +P+IASP  ASS+ ++
Sbjct: 6   MGRRKKKAAGSSEPETVTLPISGITDSTHVNGDSGFSIFNDNGNEPLIASPYPASSVQNS 65

Query: 61  SLQIPLLTD-----------GTGEGSAAANASASEPPKLDEGYFEIETIRRKRVRKGQLQ 120
           S+Q PL+TD             GE +AA + SA E  K DEG+FE+E+I RKRVRKGQLQ
Sbjct: 66  SVQTPLVTDEAGEVNGGDDGDRGEVNAAGDVSAYEQTKFDEGFFEVESILRKRVRKGQLQ 125

Query: 121 YLVKWHGWPETANTWEPSDNLQACSEFIEEFEERMEISRSGKQRKRKRTDGDSDNQPHER 180
           YLVKWHGWP+TANTWEPSDNLQ+CSE I+EFEE    SRSGKQRKRKR  G  +NQ  E+
Sbjct: 126 YLVKWHGWPKTANTWEPSDNLQSCSELIDEFEES---SRSGKQRKRKRKVGGVENQSREK 185

Query: 181 KQHRSLATTSVTEVNISSVDDRLLAAPL--KILCDLPI--GSVDVENGHMDERFKGSRKG 240
           K+H +LAT +VT++ IS+VDD + A PL  KI CDLP     VDVENGHM+  F GSRK 
Sbjct: 186 KRHHNLATNNVTDIVISTVDDCISATPLNIKIHCDLPTPQAPVDVENGHMEGTFYGSRKR 245

Query: 241 DEYDLKLIELK----------DKTAEASKDPGLVHDDSNADCGLGSTQGSHSIGAKRRKS 300
           D++DLKL ELK          DK A AS D  LV+D S  DC +GS Q SHSIG+KRRKS
Sbjct: 246 DDHDLKLSELKAAMSANMVDSDKKAVASNDLVLVYDVSKVDCVVGSNQESHSIGSKRRKS 305

Query: 301 SRVKRFTKDTTLSENSGQGSKQNGVTGSIEPTDRNEQLGSKNPSL----RNVSTITKIIK 360
           SRVKRFTKD  LSE+S QG K+N  T SIEPTDRNE+L  +NPSL    R VS IT+IIK
Sbjct: 306 SRVKRFTKDAALSEDSEQGLKRNASTLSIEPTDRNEELELENPSLSGHSRKVSDITRIIK 365

Query: 361 PVGYSVSVSNNIADVVVTFLALSTDGKEVTVNNKFLKVDNPLLLINFYEQHLRYNPTS 383
           PVGYSVSVSN I DV VTFL L +DGKEVTV+NKFLK +NP LLINFYEQHLRYNPTS
Sbjct: 366 PVGYSVSVSNGIPDVTVTFLVLRSDGKEVTVSNKFLKTNNPHLLINFYEQHLRYNPTS 420

[Close]

BLAST of Sed0017190 vs. ExPASy TrEMBL
Match: A0A6J1EFU6 (chromo domain-containing protein LHP1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432131 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 4.9e-120
Identity = 260/418 (62.20%), Postives = 301/418 (72.01%), Query Frame = 0


Query: 1   MGRGRKKAVKSSEPDALAL-------SIHGNGDSVPSNSNDNGGQPIIASPLQASSLLDA 60
           MGR +KKA  SSEP+ + L       S H NGDS  S  NDNG +P+IASP  ASS+ ++
Sbjct: 1   MGRRKKKAAGSSEPETVTLPISGITDSTHVNGDSGFSIFNDNGNEPLIASPYPASSVQNS 60

Query: 61  SLQIPLLTD-----------GTGEGSAAANASASEPPKLDEGYFEIETIRRKRVRKGQLQ 120
           S+Q PL+TD             GE +AA + SA E  K DEG+FE+E+I RKRVRKGQLQ
Sbjct: 61  SVQTPLVTDEAGEVNGGDDGDRGEVNAAGDVSAYEQTKFDEGFFEVESILRKRVRKGQLQ 120

Query: 121 YLVKWHGWPETANTWEPSDNLQACSEFIEEFEERMEISRSGKQRKRKRTDGDSDNQPHER 180
           YLVKWHGWP+TANTWEPSDNLQ+CSE I+EFEE    SRSGKQRKRKR  G  +NQ  E+
Sbjct: 121 YLVKWHGWPKTANTWEPSDNLQSCSELIDEFEES---SRSGKQRKRKRKVGGVENQSREK 180

Query: 181 KQHRSLATTSVTEVNISSVDDRLLAAPL--KILCDLPI--GSVDVENGHMDERFKGSRKG 240
           K+H +LAT +VT++ IS+VDD + A PL  KI CDLP     VDVENGHM+  F GSRK 
Sbjct: 181 KRHHNLATNNVTDIVISTVDDCISATPLNIKIHCDLPTPQAPVDVENGHMEGTFYGSRKR 240

Query: 241 DEYDLKLIELK----------DKTAEASKDPGLVHDDSNADCGLGSTQGSHSIGAKRRKS 300
           D++DLKL ELK          DK A AS D  LV+D S  DC +GS Q SHSIG+KRRKS
Sbjct: 241 DDHDLKLSELKAAMSANMVDSDKKAVASNDLVLVYDVSKVDCVVGSNQESHSIGSKRRKS 300

Query: 301 SRVKRFTKDTTLSENSGQGSKQNGVTGSIEPTDRNEQLGSKNPSL----RNVSTITKIIK 360
           SRVKRFTKD  LSE+S QG K+N  T SIEPTDRNE+L  +NPSL    R VS IT+IIK
Sbjct: 301 SRVKRFTKDAALSEDSEQGLKRNASTLSIEPTDRNEELELENPSLSGHSRKVSDITRIIK 360

Query: 361 PVGYSVSVSNNIADVVVTFLALSTDGKEVTVNNKFLKVDNPLLLINFYEQHLRYNPTS 383
           PVGYSVSVSN I DV VTFL L +DGKEVTV+NKFLK +NP LLINFYEQHLRYNPTS
Sbjct: 361 PVGYSVSVSNGIPDVTVTFLVLRSDGKEVTVSNKFLKTNNPHLLINFYEQHLRYNPTS 415

[Close]

BLAST of Sed0017190 vs. ExPASy TrEMBL
Match: A0A6J1IT89 (chromo domain protein LHP1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479720 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 1.0e-117
Identity = 257/418 (61.48%), Postives = 297/418 (71.05%), Query Frame = 0


Query: 1   MGRGRKKAVKSSEPDALALSIHG-------NGDSVPSNSNDNGGQPIIASPLQASSLLDA 60
           MGR +K A  SSEP+ + L I G       NGDS  S  NDNG +P+I SP  ASS+ ++
Sbjct: 1   MGRRKKAAAGSSEPETVTLPISGITDSTRVNGDSGFSIFNDNGNEPLIVSPYPASSVQNS 60

Query: 61  SLQIPLLTDGT-----------GEGSAAANASASEPPKLDEGYFEIETIRRKRVRKGQLQ 120
            +Q P +TD             GE +AA + SASE  KLDEG+FE+E+I RKRV KGQLQ
Sbjct: 61  PVQTPPVTDEAGEVNGGDDGDHGEVNAAGDVSASEQTKLDEGFFEVESILRKRVSKGQLQ 120

Query: 121 YLVKWHGWPETANTWEPSDNLQACSEFIEEFEERMEISRSGKQRKRKRTDGDSDNQPHER 180
           YLVKWHGWP+TANTWEPSDNLQ+CSE I+EFEE    SRSGKQRKRKR  G  +NQ  E+
Sbjct: 121 YLVKWHGWPKTANTWEPSDNLQSCSELIDEFEES---SRSGKQRKRKRKVGGVENQYREK 180

Query: 181 KQHRSLATTSVTEVNISSVDDRLLAAPL--KILCDLPI--GSVDVENGHMDERFKGSRKG 240
           K+H + AT +VT++ IS+VDD L AAPL  KI CDLP     +DVENGHM+  F GSRK 
Sbjct: 181 KRHHNFATNNVTDIVISTVDDCLSAAPLNIKIRCDLPTPQAPIDVENGHMEGTFYGSRKR 240

Query: 241 DEYDLKLIELK----------DKTAEASKDPGLVHDDSNADCGLGSTQGSHSIGAKRRKS 300
           D++DLKL ELK          DK A AS D  LV+D S  DC +G  Q SHSIGAK+RKS
Sbjct: 241 DDHDLKLSELKAAMSANMVDSDKKAVASNDLVLVYDVSKVDCVVGFNQESHSIGAKKRKS 300

Query: 301 SRVKRFTKDTTLSENSGQGSKQNGVTGSIEPTDRNEQLGSKNPSL----RNVSTITKIIK 360
           SRVKRFTKD  LSE+S QG K+N  T SIEPTDRNE+L  +NPSL    RNVS IT+IIK
Sbjct: 301 SRVKRFTKDAALSEDSEQGLKRNASTLSIEPTDRNEELELENPSLSGHSRNVSDITRIIK 360

Query: 361 PVGYSVSVSNNIADVVVTFLALSTDGKEVTVNNKFLKVDNPLLLINFYEQHLRYNPTS 383
           PVGYSVSVSN I DV VTFL L  DGKEVTV+NKFLK +NP LLINFYEQHLRYNPTS
Sbjct: 361 PVGYSVSVSNGIPDVTVTFLVLRCDGKEVTVSNKFLKTNNPPLLINFYEQHLRYNPTS 415

[Close]

BLAST of Sed0017190 vs. TAIR 10
Match: AT5G17690.1 (like heterochromatin protein (LHP1) )

HSP 1 Score: 191.0 bits (484), Expect = 1.7e-48
Identity = 143/367 (38.96%), Postives = 202/367 (55.04%), Query Frame = 0


Query: 62  DGTGEGSAAANASASEPPKLDEGYFEIETIRRKRVRKGQLQYLVKWHGWPETANTWEPSD 121
           +G GEG         E PKLDEG++EIE IRRKRVRKG++QYL+KW GWPETANTWEP +
Sbjct: 90  EGEGEG------GQEERPKLDEGFYEIEAIRRKRVRKGKVQYLIKWRGWPETANTWEPLE 149

Query: 122 NLQACSEFIEEFEERMEISRSGKQRKRKRTDGDSDNQPHERKQHRSLATT----SVTEVN 181
           NLQ+ ++ I+ FE  ++  + G++RKRK     S  +  +R    S   T    S T +N
Sbjct: 150 NLQSIADVIDAFEGSLKPGKPGRKRKRKYAGPHSQMKKKQRLTSTSHDATEKSDSSTSLN 209

Query: 182 ISSVDDRLLAAPLKIL-CDLPIGSVDVENGHMDERFKGSRKGDEYDLKLIELKDKTAEAS 241
            SS+ D  +  PL +    L    V+ +N ++  + + +  G     + + L D   E  
Sbjct: 210 NSSLPD--IPDPLDLSGSSLLNRDVEAKNAYVSNQVE-ANSGSVGMARQVRLIDN--EKE 269

Query: 242 KDP------GLVHDDSNADC----GLGS------------------TQGSHSIGAKRRKS 301
            DP      G V++ + A C    G+GS                   + S  IGAKRRKS
Sbjct: 270 YDPTLNELRGPVNNSNGAGCSQGGGIGSEGDNVRPNGLLKVYPKELDKNSRFIGAKRRKS 329

Query: 302 SRVKRFTKDTTLSENSGQGSKQNGVTGSIEPTD---RNEQLGSKNPSLR---NVS----- 361
             VKRF +D + S N    + QN +T  +   D   R  ++G++ P +    N+S     
Sbjct: 330 GSVKRFKQDGSTSNNHTAPTDQN-LTPDLTTLDSFGRIARMGNEYPGVMENCNLSQKTKI 389

Query: 362 ---TITKIIKPVGYSVSVSNNIADVVVTFLALSTDGKEVTVNNKFLKVDNPLLLINFYEQ 382
               ITKI+KP+ ++ SVS+N+ +V+VTFLAL +DGKE  V+N+FLK  NP LLI FYEQ
Sbjct: 390 EELDITKILKPMSFTASVSDNVQEVLVTFLALRSDGKEALVDNRFLKAHNPHLLIEFYEQ 444

The following BLAST results are available for this feature:

BLAST of Sed0017190 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597211.1	1.0e-132	65.87	Chromo domain protein LHP1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022950639.1	5.2e-132	65.63	chromo domain-containing protein LHP1-like [Cucurbita moschata]	[more]
XP_023540194.1	2.0e-131	65.63	chromo domain-containing protein LHP1-like [Cucurbita pepo subsp. pepo]	[more]
KAG7028682.1	3.7e-130	64.32	Chromo domain protein LHP1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022974186.1	4.9e-130	64.66	chromo domain-containing protein LHP1-like [Cucurbita maxima] >XP_022975510.1 ch...	[more]

BLAST of Sed0017190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q946J8	2.4e-47	38.96	Chromo domain-containing protein LHP1 OS=Arabidopsis thaliana OX=3702 GN=LHP1 PE...	[more]
Q944N1	7.7e-46	37.54	Chromo domain protein LHP1 OS=Solanum lycopersicum OX=4081 GN=LHP1 PE=1 SV=2	[more]
Q339W7	3.6e-43	37.95	Probable chromo domain-containing protein LHP1 OS=Oryza sativa subsp. japonica O...	[more]
O95931	2.0e-09	44.12	Chromobox protein homolog 7 OS=Homo sapiens OX=9606 GN=CBX7 PE=1 SV=1	[more]
Q8VDS3	2.0e-09	44.12	Chromobox protein homolog 7 OS=Mus musculus OX=10090 GN=Cbx7 PE=1 SV=1	[more]

BLAST of Sed0017190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GGE8	2.5e-132	65.63	chromo domain-containing protein LHP1-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1IGX1	2.4e-130	64.66	chromo domain-containing protein LHP1-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1EA84	4.9e-120	62.20	chromo domain-containing protein LHP1-like isoform X2 OS=Cucurbita moschata OX=3...	[more]
A0A6J1EFU6	4.9e-120	62.20	chromo domain-containing protein LHP1-like isoform X1 OS=Cucurbita moschata OX=3...	[more]
A0A6J1IT89	1.0e-117	61.48	chromo domain protein LHP1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Sed0017190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17690.1	1.7e-48	38.96	like heterochromatin protein (LHP1)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000953	Chromo/chromo shadow domain	SMART	SM00298	chromo_7	coord: 85..138 e-value: 6.5E-14 score: 62.2
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 86..145 score: 18.186602
IPR008251	Chromo shadow domain	SMART	SM00300	ChS_2	coord: 308..381 e-value: 1.5E-4 score: 30.1
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 86..136 e-value: 1.3E-15 score: 57.0
None	No IPR available	GENE3D	2.40.50.40		coord: 72..137 e-value: 1.4E-21 score: 77.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..311
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 278..311
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..80
None	No IPR available	CDD	cd00024	CD_CSD	coord: 86..135 e-value: 7.90145E-21 score: 82.91
IPR044251	Chromo domain-containing protein LHP1	PANTHER	PTHR47240	CHROMO DOMAIN-CONTAINING PROTEIN LHP1	coord: 64..381
IPR023779	Chromo domain, conserved site	PROSITE	PS00598	CHROMO_1	coord: 103..123
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 77..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017190.1	Sed0017190.1	mRNA
Sed0017190.2	Sed0017190.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031507	heterochromatin assembly
biological_process	GO:0006325	chromatin organization
cellular_component	GO:0005634	nucleus