Sed0017156 (gene) Chayote v1

Overview


Name	Sed0017156
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Pentatricopeptide repeat-containing protein
Location	LG11: 7706369 .. 7708494 (-)
RNA-Seq Expression	Sed0017156
Synteny	Sed0017156

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCCTCTTTCGCAGCTCTCCTCCAGCCAGCATCTCAGTCTCCGACGACGACGGCGATTGAATGCCTGAAATTTTTTTGTTACAAGTTTTGGTTTAGATAAATGTTTCCATGTTGATTTGCAAAATGTCAAGAGAGAAAGCCATTATCACTCTCTTGCAAGGCTGCAACAGCCTGAACAAGCTTCGAAAAATCCAAGCGCATGTTATAGTGAGCGGCCTCCGCCATAGCGCTGCCATTGGCAACAAGCTTTTGAACTTCTGTGCCATCTCCGTTTCAGGTTCTCTTCCCTACGCCCTGCTTCTCTTCCATCAAATGGAGAACCCACAAACCGAAGCCTGGAACTCCCTCATCAGAGCCTTCGCTCAGAGCTCATCTCCCATGGACGCCGTTCTTCATTACAATCGAATGGTATGTGCCTCTTTCTCTTCACCCGACACGTTTACTTTCTCATTTGTGATCAAAGCCTGTGAAAGACTCAAAGCTGAGCGTAAGTTTAAAGAGGTTCATGGATCTGTGATTCGATTTGGTTACAATGGGGATGTTATTGTTTGTACAAATCTTGTTAAATGTTATGCGGCAGTGGGGTCTGTTTGTGATGCCCAGCAGGTGTTTGATGAAATGCATGTGAGAGACTTGGTGGCTTGGAATGCTATGATTTCTTGCTTTTCTCAACAGGGGCTGCACCAGGAGGCATTGCTGGTGTATAATCGGATGAGAAGTGAAAATGTGGATGTTGATGGGTTTACTCTTGTTGGGTTGATTTCGTCGTGTGCGCATCTTGGAGCCTTTAATATTGGGGTTCAGATGCATAGAGTTGCTCGTGGAAAGGGTCTTGTGGAGAGTCTTTATGTTGGAAATGCGTTGATAGATATGTATGCTAAATGTGGTAGTTTGGATCAAGCTATTCATATCTTTAATAGAATGCAGAGGAAGGACATTTTCACTTGGAATTCGATGATTGTTGGATATGGAGTGCATGGTCGAGGGAGTGAAGCTATATTTTACTTCCAACAGATGTTAGAAGCAAGAATGCAGCCAAACTCTGTCACATTTTTGGGTTTGCTTTGTGGATGTAGTCATCAAGGTTTGGTCCAAGAAGGTGTTAAGTACTTCAATTTGATGAGCTCTAAGTTTAGAATAAGACCTGAGGTTAAACACTACGGATGCCTTGTGGATTTATATGGTCGGGCTGGGAAGCTTGAAACGGCGCTTGAAACTATATTGAATTTGTCACAAAATGATTCGGTTTTGTGGCGGATCTTACTTGGCTCTTGCAAAATTCATAAAAATGTGAGTATAGGAGAAATTGCCATGAAAAATCTCTCTGAGCTTGGAGCTACAAATGCAGGGGATTGTATATTGCTGGCTACAATCTATGCTGGAGTGAAGGATACAGCTGGTGTAGCAAGAATGAGAAAAATGATCAAGAGCCAAGGGATAAAAACTACCCCTGGTTGGAGTTGGATTGAAATTGGGGAACAAGTTCATAAATTCGTGGTTGATGACAAGTCCCATCGTTATTCCATTGAAATTTATGAGAAATTGAGGGAAGTTATTCATCAAGCTTCCTTGTTTGGATACATAGGAGATGAGTCTGCTTTTTCACTGGATGTGTTTTCCACCGCAGAGACTTTGGATTCTTCATGTACATATCATAGTGAAAAACTCGCAATTGCATTTGGATTGGCAAGAACCAGAGATGGAACTCAGCTACGTATCGTTAAAAATCTTAGAGTTTGCAGAGATTGTCATTCATTCATAAAAGCTGTCTCAGTGGCATTCAACCGAGAAATAATTGTTAGAGATCGAGTTCGGTTCCATCACTTCAAGGATGGCCAATGTTCCTGTAATGACTACTGGTGAAAAGTGAAATATATGCTTCCACTTCTCCCTATTCAAGTCTGCATTAGCAATGTAAAGTCGTCCCGAACATGTAAGGAGAAAAAAGTGAGCTTCAAGTTATTATGCACTTCTTTTGTGTAACTTGACTTCTGACCTACCGCAGCATGGTGGGCTTATGTAATTACTCATGTGCATCTCAATAGCCATGAAGACCACATAGCAAGCACAAATTTACCATCATAAGGAGGATACTATACAGGTTGGAAGAAACTTCTCTTGCTTTC

mRNA sequence

GTCCTCTTTCGCAGCTCTCCTCCAGCCAGCATCTCAGTCTCCGACGACGACGGCGATTGAATGCCTGAAATTTTTTTGTTACAAGTTTTGGTTTAGATAAATGTTTCCATGTTGATTTGCAAAATGTCAAGAGAGAAAGCCATTATCACTCTCTTGCAAGGCTGCAACAGCCTGAACAAGCTTCGAAAAATCCAAGCGCATGTTATAGTGAGCGGCCTCCGCCATAGCGCTGCCATTGGCAACAAGCTTTTGAACTTCTGTGCCATCTCCGTTTCAGGTTCTCTTCCCTACGCCCTGCTTCTCTTCCATCAAATGGAGAACCCACAAACCGAAGCCTGGAACTCCCTCATCAGAGCCTTCGCTCAGAGCTCATCTCCCATGGACGCCGTTCTTCATTACAATCGAATGGTATGTGCCTCTTTCTCTTCACCCGACACGTTTACTTTCTCATTTGTGATCAAAGCCTGTGAAAGACTCAAAGCTGAGCGTAAGTTTAAAGAGGTTCATGGATCTGTGATTCGATTTGGTTACAATGGGGATGTTATTGTTTGTACAAATCTTGTTAAATGTTATGCGGCAGTGGGGTCTGTTTGTGATGCCCAGCAGGTGTTTGATGAAATGCATGTGAGAGACTTGGTGGCTTGGAATGCTATGATTTCTTGCTTTTCTCAACAGGGGCTGCACCAGGAGGCATTGCTGGTGTATAATCGGATGAGAAGTGAAAATGTGGATGTTGATGGGTTTACTCTTGTTGGGTTGATTTCGTCGTGTGCGCATCTTGGAGCCTTTAATATTGGGGTTCAGATGCATAGAGTTGCTCGTGGAAAGGGTCTTGTGGAGAGTCTTTATGTTGGAAATGCGTTGATAGATATGTATGCTAAATGTGGTAGTTTGGATCAAGCTATTCATATCTTTAATAGAATGCAGAGGAAGGACATTTTCACTTGGAATTCGATGATTGTTGGATATGGAGTGCATGGTCGAGGGAGTGAAGCTATATTTTACTTCCAACAGATGTTAGAAGCAAGAATGCAGCCAAACTCTGTCACATTTTTGGGTTTGCTTTGTGGATGTAGTCATCAAGGTTTGGTCCAAGAAGGTGTTAAGTACTTCAATTTGATGAGCTCTAAGTTTAGAATAAGACCTGAGGTTAAACACTACGGATGCCTTGTGGATTTATATGGTCGGGCTGGGAAGCTTGAAACGGCGCTTGAAACTATATTGAATTTGTCACAAAATGATTCGGTTTTGTGGCGGATCTTACTTGGCTCTTGCAAAATTCATAAAAATGTGAGTATAGGAGAAATTGCCATGAAAAATCTCTCTGAGCTTGGAGCTACAAATGCAGGGGATTGTATATTGCTGGCTACAATCTATGCTGGAGTGAAGGATACAGCTGGTGTAGCAAGAATGAGAAAAATGATCAAGAGCCAAGGGATAAAAACTACCCCTGGTTGGAGTTGGATTGAAATTGGGGAACAAGTTCATAAATTCGTGGTTGATGACAAGTCCCATCGTTATTCCATTGAAATTTATGAGAAATTGAGGGAAGTTATTCATCAAGCTTCCTTGTTTGGATACATAGGAGATGAGTCTGCTTTTTCACTGGATGTGTTTTCCACCGCAGAGACTTTGGATTCTTCATGTACATATCATAGTGAAAAACTCGCAATTGCATTTGGATTGGCAAGAACCAGAGATGGAACTCAGCTACGTATCGTTAAAAATCTTAGAGTTTGCAGAGATTGTCATTCATTCATAAAAGCTGTCTCAGTGGCATTCAACCGAGAAATAATTGTTAGAGATCGAGTTCGGTTCCATCACTTCAAGGATGGCCAATGTTCCTGTAATGACTACTGGTGAAAAGTGAAATATATGCTTCCACTTCTCCCTATTCAAGTCTGCATTAGCAATGTAAAGTCGTCCCGAACATGTAAGGAGAAAAAAGTGAGCTTCAAGTTATTATGCACTTCTTTTGTGTAACTTGACTTCTGACCTACCGCAGCATGGTGGGCTTATGTAATTACTCATGTGCATCTCAATAGCCATGAAGACCACATAGCAAGCACAAATTTACCATCATAAGGAGGATACTATACAGGTTGGAAGAAACTTCTCTTGCTTTC

Coding sequence (CDS)

ATGTTGATTTGCAAAATGTCAAGAGAGAAAGCCATTATCACTCTCTTGCAAGGCTGCAACAGCCTGAACAAGCTTCGAAAAATCCAAGCGCATGTTATAGTGAGCGGCCTCCGCCATAGCGCTGCCATTGGCAACAAGCTTTTGAACTTCTGTGCCATCTCCGTTTCAGGTTCTCTTCCCTACGCCCTGCTTCTCTTCCATCAAATGGAGAACCCACAAACCGAAGCCTGGAACTCCCTCATCAGAGCCTTCGCTCAGAGCTCATCTCCCATGGACGCCGTTCTTCATTACAATCGAATGGTATGTGCCTCTTTCTCTTCACCCGACACGTTTACTTTCTCATTTGTGATCAAAGCCTGTGAAAGACTCAAAGCTGAGCGTAAGTTTAAAGAGGTTCATGGATCTGTGATTCGATTTGGTTACAATGGGGATGTTATTGTTTGTACAAATCTTGTTAAATGTTATGCGGCAGTGGGGTCTGTTTGTGATGCCCAGCAGGTGTTTGATGAAATGCATGTGAGAGACTTGGTGGCTTGGAATGCTATGATTTCTTGCTTTTCTCAACAGGGGCTGCACCAGGAGGCATTGCTGGTGTATAATCGGATGAGAAGTGAAAATGTGGATGTTGATGGGTTTACTCTTGTTGGGTTGATTTCGTCGTGTGCGCATCTTGGAGCCTTTAATATTGGGGTTCAGATGCATAGAGTTGCTCGTGGAAAGGGTCTTGTGGAGAGTCTTTATGTTGGAAATGCGTTGATAGATATGTATGCTAAATGTGGTAGTTTGGATCAAGCTATTCATATCTTTAATAGAATGCAGAGGAAGGACATTTTCACTTGGAATTCGATGATTGTTGGATATGGAGTGCATGGTCGAGGGAGTGAAGCTATATTTTACTTCCAACAGATGTTAGAAGCAAGAATGCAGCCAAACTCTGTCACATTTTTGGGTTTGCTTTGTGGATGTAGTCATCAAGGTTTGGTCCAAGAAGGTGTTAAGTACTTCAATTTGATGAGCTCTAAGTTTAGAATAAGACCTGAGGTTAAACACTACGGATGCCTTGTGGATTTATATGGTCGGGCTGGGAAGCTTGAAACGGCGCTTGAAACTATATTGAATTTGTCACAAAATGATTCGGTTTTGTGGCGGATCTTACTTGGCTCTTGCAAAATTCATAAAAATGTGAGTATAGGAGAAATTGCCATGAAAAATCTCTCTGAGCTTGGAGCTACAAATGCAGGGGATTGTATATTGCTGGCTACAATCTATGCTGGAGTGAAGGATACAGCTGGTGTAGCAAGAATGAGAAAAATGATCAAGAGCCAAGGGATAAAAACTACCCCTGGTTGGAGTTGGATTGAAATTGGGGAACAAGTTCATAAATTCGTGGTTGATGACAAGTCCCATCGTTATTCCATTGAAATTTATGAGAAATTGAGGGAAGTTATTCATCAAGCTTCCTTGTTTGGATACATAGGAGATGAGTCTGCTTTTTCACTGGATGTGTTTTCCACCGCAGAGACTTTGGATTCTTCATGTACATATCATAGTGAAAAACTCGCAATTGCATTTGGATTGGCAAGAACCAGAGATGGAACTCAGCTACGTATCGTTAAAAATCTTAGAGTTTGCAGAGATTGTCATTCATTCATAAAAGCTGTCTCAGTGGCATTCAACCGAGAAATAATTGTTAGAGATCGAGTTCGGTTCCATCACTTCAAGGATGGCCAATGTTCCTGTAATGACTACTGGTGA

Protein sequence

MLICKMSREKAIITLLQGCNSLNKLRKIQAHVIVSGLRHSAAIGNKLLNFCAISVSGSLPYALLLFHQMENPQTEAWNSLIRAFAQSSSPMDAVLHYNRMVCASFSSPDTFTFSFVIKACERLKAERKFKEVHGSVIRFGYNGDVIVCTNLVKCYAAVGSVCDAQQVFDEMHVRDLVAWNAMISCFSQQGLHQEALLVYNRMRSENVDVDGFTLVGLISSCAHLGAFNIGVQMHRVARGKGLVESLYVGNALIDMYAKCGSLDQAIHIFNRMQRKDIFTWNSMIVGYGVHGRGSEAIFYFQQMLEARMQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRIRPEVKHYGCLVDLYGRAGKLETALETILNLSQNDSVLWRILLGSCKIHKNVSIGEIAMKNLSELGATNAGDCILLATIYAGVKDTAGVARMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSHRYSIEIYEKLREVIHQASLFGYIGDESAFSLDVFSTAETLDSSCTYHSEKLAIAFGLARTRDGTQLRIVKNLRVCRDCHSFIKAVSVAFNREIIVRDRVRFHHFKDGQCSCNDYW

Homology

[Close]

BLAST of Sed0017156 vs. NCBI nr
Match: XP_038890323.1 (pentatricopeptide repeat-containing protein At3g56550 [Benincasa hispida] >XP_038890324.1 pentatricopeptide repeat-containing protein At3g56550 [Benincasa hispida] >XP_038890325.1 pentatricopeptide repeat-containing protein At3g56550 [Benincasa hispida])

HSP 1 Score: 1048.9 bits (2711), Expect = 1.6e-302
Identity = 512/579 (88.43%), Postives = 541/579 (93.44%), Query Frame = 0


Query: 6   MSREKAIITLLQGCNSLNKLRKIQAHVIVSGLRHSAAIGNKLLNFCAISVSGSLPYALLL 65
           MS+EKAI+TLLQGCNSLN+LRKI AHVIVSGLRH  AIGNKLLNFCAISVSGSL YA LL
Sbjct: 1   MSKEKAILTLLQGCNSLNRLRKIHAHVIVSGLRHHVAIGNKLLNFCAISVSGSLAYAQLL 60

Query: 66  FHQMENPQTEAWNSLIRAFAQSSSPMDAVLHYNRMVCASFSSPDTFTFSFVIKACERLKA 125
           FHQME PQTEAWNS+IR FAQSSSP+DA++ YN+MV ASFSSPDTFTFSFV+KACER+KA
Sbjct: 61  FHQMECPQTEAWNSIIRGFAQSSSPIDAIIFYNQMVWASFSSPDTFTFSFVLKACERIKA 120

Query: 126 ERKFKEVHGSVIRFGYNGDVIVCTNLVKCYAAVGSVCDAQQVFDEMHVRDLVAWNAMISC 185
           ERK  EVHGSVIR GY+GDVIVCTNLVKCY+A+GS+C AQQVFD+M  RDLVAWNAMISC
Sbjct: 121 ERKCNEVHGSVIRCGYDGDVIVCTNLVKCYSAMGSICIAQQVFDKMPARDLVAWNAMISC 180

Query: 186 FSQQGLHQEALLVYNRMRSENVDVDGFTLVGLISSCAHLGAFNIGVQMHRVARGKGLVES 245
           FSQQGLHQEAL  YN+MRSENVDVDGFTLVGLISSCAHLGA NIGVQMHR AR KGLV+S
Sbjct: 181 FSQQGLHQEALQTYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQS 240

Query: 246 LYVGNALIDMYAKCGSLDQAIHIFNRMQRKDIFTWNSMIVGYGVHGRGSEAIFYFQQMLE 305
           LYVGNALIDMYAKCGSLD+AI IF+RMQRKDIFTWNSMIVGYGVHGRGSEAI+ FQ+MLE
Sbjct: 241 LYVGNALIDMYAKCGSLDEAIFIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQKMLE 300

Query: 306 ARMQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRIRPEVKHYGCLVDLYGRAGKLE 365
           ARMQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFR+RPEVKHYGCLVDLYGRAGKLE
Sbjct: 301 ARMQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRLRPEVKHYGCLVDLYGRAGKLE 360

Query: 366 TALETILNLSQNDSVLWRILLGSCKIHKNVSIGEIAMKNLSELGATNAGDCILLATIYAG 425
            ALE +LN SQND VLWRILLGSCKIHKN+ IGEIAMK+LSELGATNAGDCILLATIYAG
Sbjct: 361 KALEIVLNSSQNDPVLWRILLGSCKIHKNMKIGEIAMKSLSELGATNAGDCILLATIYAG 420

Query: 426 VKDTAGVARMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSHRYSIEIYEKLREVIHQ 485
            KDT GVARMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSHRYSIE+YEKLREVIHQ
Sbjct: 421 EKDTVGVARMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSHRYSIEVYEKLREVIHQ 480

Query: 486 ASLFGYIGDESAFSLDVFSTAETLDSSCTYHSEKLAIAFGLARTRDGTQLRIVKNLRVCR 545
           ASLFGY+GD S  SLDV ST ETL +SCTYHSEKLAIAFGLART DGTQ+RIVKNLRVCR
Sbjct: 481 ASLFGYVGDASVSSLDVLSTTETLKTSCTYHSEKLAIAFGLARTTDGTQIRIVKNLRVCR 540

Query: 546 DCHSFIKAVSVAFNREIIVRDRVRFHHFKDGQCSCNDYW 585
           DCHSFIKAVS AFNREIIVRDRVRFHHFK GQCSCNDYW
Sbjct: 541 DCHSFIKAVSEAFNREIIVRDRVRFHHFKGGQCSCNDYW 579

[Close]

BLAST of Sed0017156 vs. NCBI nr
Match: XP_022149932.1 (pentatricopeptide repeat-containing protein At3g56550 [Momordica charantia] >XP_022149933.1 pentatricopeptide repeat-containing protein At3g56550 [Momordica charantia] >XP_022149934.1 pentatricopeptide repeat-containing protein At3g56550 [Momordica charantia] >XP_022149935.1 pentatricopeptide repeat-containing protein At3g56550 [Momordica charantia])

HSP 1 Score: 1023.1 bits (2644), Expect = 9.6e-295
Identity = 496/579 (85.66%), Postives = 539/579 (93.09%), Query Frame = 0


Query: 6   MSREKAIITLLQGCNSLNKLRKIQAHVIVSGLRHSAAIGNKLLNFCAISVSGSLPYALLL 65
           MS EKAI+TLLQGCNSLNKLRKI AHVI+SGLRH AAIGNKLLNFCAISVSGSLPYA LL
Sbjct: 1   MSNEKAILTLLQGCNSLNKLRKIHAHVILSGLRHHAAIGNKLLNFCAISVSGSLPYARLL 60

Query: 66  FHQMENPQTEAWNSLIRAFAQSSSPMDAVLHYNRMVCASFSSPDTFTFSFVIKACERLKA 125
           F  M+ PQTEAWNS+IR FAQS+SP++AV++YN+MV AS S PDTFTFSFV+KACERLKA
Sbjct: 61  FRHMDCPQTEAWNSIIRGFAQSASPIEAVVYYNQMVWASLSPPDTFTFSFVLKACERLKA 120

Query: 126 ERKFKEVHGSVIRFGYNGDVIVCTNLVKCYAAVGSVCDAQQVFDEMHVRDLVAWNAMISC 185
           ERK +EVHGSVIR+GY+GDVI+CTNL+KCYAA+G +C AQQVFD+M  RDLVAWNAMISC
Sbjct: 121 ERKCREVHGSVIRWGYDGDVIICTNLMKCYAAMGFICVAQQVFDKMPTRDLVAWNAMISC 180

Query: 186 FSQQGLHQEALLVYNRMRSENVDVDGFTLVGLISSCAHLGAFNIGVQMHRVARGKGLVES 245
           +SQQGLHQEAL  YN+MRS NVDVDGFTLVGL+SSCAHLGA NIGVQMHR AR KGLVES
Sbjct: 181 YSQQGLHQEALETYNQMRSGNVDVDGFTLVGLLSSCAHLGALNIGVQMHRFAREKGLVES 240

Query: 246 LYVGNALIDMYAKCGSLDQAIHIFNRMQRKDIFTWNSMIVGYGVHGRGSEAIFYFQQMLE 305
           LYVGNALIDMYAKCGSLDQAI IF+RMQRKD+FTWNSMIVGYGVHGRG+EAIF FQQMLE
Sbjct: 241 LYVGNALIDMYAKCGSLDQAILIFDRMQRKDVFTWNSMIVGYGVHGRGTEAIFCFQQMLE 300

Query: 306 ARMQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRIRPEVKHYGCLVDLYGRAGKLE 365
           AR+QP+SVTFLGLLCGCSHQGLVQEGVK+FNLMSSKFR+RPEVKHYGCLVDLYGRAGKLE
Sbjct: 301 ARIQPSSVTFLGLLCGCSHQGLVQEGVKFFNLMSSKFRLRPEVKHYGCLVDLYGRAGKLE 360

Query: 366 TALETILNLSQNDSVLWRILLGSCKIHKNVSIGEIAMKNLSELGATNAGDCILLATIYAG 425
            ALE ILN SQND VLWRILLGSCKIHKNV IGEIAM NLS+LGATNAGDCILLATIYAG
Sbjct: 361 KALEIILNSSQNDPVLWRILLGSCKIHKNVGIGEIAMNNLSQLGATNAGDCILLATIYAG 420

Query: 426 VKDTAGVARMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSHRYSIEIYEKLREVIHQ 485
           VK+T+GV RMRKMI+SQGIKTTPGWSWIEIGEQVHKFVVDDKSHRY IE+YEKL+EVIHQ
Sbjct: 421 VKNTSGVVRMRKMIRSQGIKTTPGWSWIEIGEQVHKFVVDDKSHRYYIEVYEKLKEVIHQ 480

Query: 486 ASLFGYIGDESAFSLDVFSTAETLDSSCTYHSEKLAIAFGLARTRDGTQLRIVKNLRVCR 545
           ASLFGYIGD    + DVFST+E L++SC+YHSEKLAIAFGLART DGTQ+RIVKNLRVCR
Sbjct: 481 ASLFGYIGDGYFSTTDVFSTSEILETSCSYHSEKLAIAFGLARTADGTQIRIVKNLRVCR 540

Query: 546 DCHSFIKAVSVAFNREIIVRDRVRFHHFKDGQCSCNDYW 585
           DCHSF+KAVS+AFNREIIVRDRVRFHHFK GQCSCNDYW
Sbjct: 541 DCHSFVKAVSLAFNREIIVRDRVRFHHFKGGQCSCNDYW 579

[Close]

BLAST of Sed0017156 vs. NCBI nr
Match: XP_004152881.1 (pentatricopeptide repeat-containing protein At3g56550 isoform X1 [Cucumis sativus] >XP_011648994.1 pentatricopeptide repeat-containing protein At3g56550 isoform X1 [Cucumis sativus] >XP_031737318.1 pentatricopeptide repeat-containing protein At3g56550 isoform X1 [Cucumis sativus])

HSP 1 Score: 1017.7 bits (2630), Expect = 4.0e-293
Identity = 496/579 (85.66%), Postives = 529/579 (91.36%), Query Frame = 0


Query: 6   MSREKAIITLLQGCNSLNKLRKIQAHVIVSGLRHSAAIGNKLLNFCAISVSGSLPYALLL 65
           MS EKAI+ LLQGCNSL +LRKI AHVIVSGL H   I NKLLNFCAISVSGSL YA LL
Sbjct: 1   MSNEKAILALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQLL 60

Query: 66  FHQMENPQTEAWNSLIRAFAQSSSPMDAVLHYNRMVCASFSSPDTFTFSFVIKACERLKA 125
           FHQME PQTEAWNS+IR FAQSSSP+DA++ YN+MVC SFS PDTFTFSFV+KACER+KA
Sbjct: 61  FHQMECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIKA 120

Query: 126 ERKFKEVHGSVIRFGYNGDVIVCTNLVKCYAAVGSVCDAQQVFDEMHVRDLVAWNAMISC 185
           ERK KEVHGSVIR GY+ DVIVCTNLVKCY+A+GSVC A+QVFD+M  RDLVAWNAMISC
Sbjct: 121 ERKCKEVHGSVIRCGYDADVIVCTNLVKCYSAMGSVCIARQVFDKMPARDLVAWNAMISC 180

Query: 186 FSQQGLHQEALLVYNRMRSENVDVDGFTLVGLISSCAHLGAFNIGVQMHRVARGKGLVES 245
           FSQQGLHQEAL  YN+MRSENVD+DGFTLVGLISSCAHLGA NIGVQMHR AR  GL +S
Sbjct: 181 FSQQGLHQEALQTYNQMRSENVDIDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQS 240

Query: 246 LYVGNALIDMYAKCGSLDQAIHIFNRMQRKDIFTWNSMIVGYGVHGRGSEAIFYFQQMLE 305
           LYVGNALIDMYAKCGSLDQAI IF+RMQRKDIFTWNSMIVGYGVHGRGSEAI+ FQQMLE
Sbjct: 241 LYVGNALIDMYAKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE 300

Query: 306 ARMQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRIRPEVKHYGCLVDLYGRAGKLE 365
           AR+QPN VTFLGLLCGCSHQGLVQEGVKYFNLMSSKFR++PEVKHYGCLVDLYGRAGKL+
Sbjct: 301 ARIQPNPVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLD 360

Query: 366 TALETILNLSQNDSVLWRILLGSCKIHKNVSIGEIAMKNLSELGATNAGDCILLATIYAG 425
            ALE + N S NDSVLWRILLGSCKIHKNV+IGEIAM  LSELGAT+AGDCILLATIYAG
Sbjct: 361 KALEIVSNSSHNDSVLWRILLGSCKIHKNVTIGEIAMNRLSELGATSAGDCILLATIYAG 420

Query: 426 VKDTAGVARMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSHRYSIEIYEKLREVIHQ 485
            KD AGVARMRKMIKSQG KTTPGWSWIEIGEQVHKFVVDDKSHRYS+E+YEKLREVIHQ
Sbjct: 421 EKDKAGVARMRKMIKSQGKKTTPGWSWIEIGEQVHKFVVDDKSHRYSVEVYEKLREVIHQ 480

Query: 486 ASLFGYIGDESAFSLDVFSTAETLDSSCTYHSEKLAIAFGLARTRDGTQLRIVKNLRVCR 545
           AS FGY+GDES  SLD+ ST ETL +SCTYHSEKLAIAFGLART DGTQ+RIVKNLRVCR
Sbjct: 481 ASFFGYVGDESISSLDMLSTMETLKTSCTYHSEKLAIAFGLARTADGTQIRIVKNLRVCR 540

Query: 546 DCHSFIKAVSVAFNREIIVRDRVRFHHFKDGQCSCNDYW 585
           DCHSFIKAVSVAFNREIIVRDRVRFHHFK G+CSCNDYW
Sbjct: 541 DCHSFIKAVSVAFNREIIVRDRVRFHHFKGGECSCNDYW 579

[Close]

BLAST of Sed0017156 vs. NCBI nr
Match: XP_023537237.1 (pentatricopeptide repeat-containing protein At3g56550 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1014.6 bits (2622), Expect = 3.4e-292
Identity = 500/579 (86.36%), Postives = 530/579 (91.54%), Query Frame = 0


Query: 6   MSREKAIITLLQGCNSLNKLRKIQAHVIVSGLRHSAAIGNKLLNFCAISVSGSLPYALLL 65
           MS+EKAIITLLQGCNSLNKLRKI AHV+VSGLRH  AI NKLLNFCAISVSGSL YA LL
Sbjct: 1   MSKEKAIITLLQGCNSLNKLRKIHAHVLVSGLRHHVAINNKLLNFCAISVSGSLAYAQLL 60

Query: 66  FHQMENPQTEAWNSLIRAFAQSSSPMDAVLHYNRMVCASFSSPDTFTFSFVIKACERLKA 125
           FHQME  QTEAWNS+IR FAQSSSP+DAV++YN+MVCASFSSPDTFTFSFV+KACERLKA
Sbjct: 61  FHQMECLQTEAWNSIIRGFAQSSSPIDAVVYYNQMVCASFSSPDTFTFSFVLKACERLKA 120

Query: 126 ERKFKEVHGSVIRFGYNGDVIVCTNLVKCYAAVGSVCDAQQVFDEMHVRDLVAWNAMISC 185
           ERK KE+HG++IR GY+GDVI+CTNLVKCYAA+GSVC AQQVFDEM VRDLVAWNAMISC
Sbjct: 121 ERKCKEIHGTIIRCGYDGDVIICTNLVKCYAAMGSVCIAQQVFDEMPVRDLVAWNAMISC 180

Query: 186 FSQQGLHQEALLVYNRMRSENVDVDGFTLVGLISSCAHLGAFNIGVQMHRVARGKGLVES 245
           FSQQGLH EAL VYN+MRSENVDVDGFTLVGLISSCAHLGA NIGVQMHR AR KGLVES
Sbjct: 181 FSQQGLHGEALQVYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVES 240

Query: 246 LYVGNALIDMYAKCGSLDQAIHIFNRMQRKDIFTWNSMIVGYGVHGRGSEAIFYFQQMLE 305
           LYVGNALIDMYAKCGSLDQAI IF+RM RKDIFTWNSMIVGYGVHGRG+EAIF F++MLE
Sbjct: 241 LYVGNALIDMYAKCGSLDQAIFIFDRMHRKDIFTWNSMIVGYGVHGRGTEAIFCFERMLE 300

Query: 306 ARMQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRIRPEVKHYGCLVDLYGRAGKLE 365
           ARMQPNS+TFLGLLCGCSHQGLVQEGVKYFNLMSSKFR+RPEVKHYGCLVDLYGRAGKLE
Sbjct: 301 ARMQPNSITFLGLLCGCSHQGLVQEGVKYFNLMSSKFRLRPEVKHYGCLVDLYGRAGKLE 360

Query: 366 TALETILNLSQNDSVLWRILLGSCKIHKNVSIGEIAMKNLSELGATNAGDCILLATIYAG 425
            ALETI N S ND VLWRILLGSCKIHKNV +GEIAM NLSELGATNAGDCILLATIYAG
Sbjct: 361 KALETIQNSSPNDPVLWRILLGSCKIHKNVGVGEIAMNNLSELGATNAGDCILLATIYAG 420

Query: 426 VKDTAGVARMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSHRYSIEIYEKLREVIHQ 485
           V DTAGVA MRK IKSQGIKT+PGWSWIEIGEQVHKFVVDDKSHR SIE+YEKLREV+HQ
Sbjct: 421 VNDTAGVASMRKTIKSQGIKTSPGWSWIEIGEQVHKFVVDDKSHRDSIEVYEKLREVLHQ 480

Query: 486 ASLFGYIGDESAFSLDVFSTAETLDSSCTYHSEKLAIAFGLARTRDGTQLRIVKNLRVCR 545
           ASLFGY+ D           AETL +S TYHSEKLAIAFGLART DGT +RIVKNLRVCR
Sbjct: 481 ASLFGYVRD-----------AETLKTSSTYHSEKLAIAFGLARTADGTPIRIVKNLRVCR 540

Query: 546 DCHSFIKAVSVAFNREIIVRDRVRFHHFKDGQCSCNDYW 585
           DCHSF+KAVSVAF+REIIVRDRVRFHHFK GQCSCNDYW
Sbjct: 541 DCHSFMKAVSVAFDREIIVRDRVRFHHFKGGQCSCNDYW 568

[Close]

BLAST of Sed0017156 vs. NCBI nr
Match: XP_022937704.1 (pentatricopeptide repeat-containing protein At3g56550 [Cucurbita moschata])

HSP 1 Score: 1010.7 bits (2612), Expect = 4.9e-291
Identity = 498/579 (86.01%), Postives = 529/579 (91.36%), Query Frame = 0


Query: 6   MSREKAIITLLQGCNSLNKLRKIQAHVIVSGLRHSAAIGNKLLNFCAISVSGSLPYALLL 65
           MS+EKAI+TLLQGCNSLNKLRKI AHV+VSGLRH  AI NKLLNFCAISVSGSL YA LL
Sbjct: 1   MSKEKAIVTLLQGCNSLNKLRKIHAHVLVSGLRHHVAINNKLLNFCAISVSGSLAYAQLL 60

Query: 66  FHQMENPQTEAWNSLIRAFAQSSSPMDAVLHYNRMVCASFSSPDTFTFSFVIKACERLKA 125
           FHQME  QTEAWNS+IR FAQSSSP+DAV++YN+MVCASFSSPDTFTFSFV+KACERLKA
Sbjct: 61  FHQMECLQTEAWNSIIRGFAQSSSPIDAVVYYNQMVCASFSSPDTFTFSFVLKACERLKA 120

Query: 126 ERKFKEVHGSVIRFGYNGDVIVCTNLVKCYAAVGSVCDAQQVFDEMHVRDLVAWNAMISC 185
           ERK KE+HG++IR GY+GDVI+CTNLVKCYAA+GSVC A QVFDEM VRDLVAWNAMISC
Sbjct: 121 ERKCKEIHGTIIRCGYDGDVIICTNLVKCYAAMGSVCIAHQVFDEMPVRDLVAWNAMISC 180

Query: 186 FSQQGLHQEALLVYNRMRSENVDVDGFTLVGLISSCAHLGAFNIGVQMHRVARGKGLVES 245
           FSQQGLH EAL VYN+MRSENVDVDGFTLVGLISSCAHLGA NIGVQMHR AR KGLVES
Sbjct: 181 FSQQGLHGEALQVYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVES 240

Query: 246 LYVGNALIDMYAKCGSLDQAIHIFNRMQRKDIFTWNSMIVGYGVHGRGSEAIFYFQQMLE 305
           LYVGNALIDMYAKCGSLDQAI IF+RM RKDIFTWNSMIVGYGVHGRG+EAIF F++MLE
Sbjct: 241 LYVGNALIDMYAKCGSLDQAIFIFDRMHRKDIFTWNSMIVGYGVHGRGTEAIFCFERMLE 300

Query: 306 ARMQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRIRPEVKHYGCLVDLYGRAGKLE 365
           ARMQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFR+RPEVKHYGCLVDLYGRAGKLE
Sbjct: 301 ARMQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRLRPEVKHYGCLVDLYGRAGKLE 360

Query: 366 TALETILNLSQNDSVLWRILLGSCKIHKNVSIGEIAMKNLSELGATNAGDCILLATIYAG 425
            ALETI N S ND VLWRILLGSCKIHKNV +GEIAM NL+ELGATNAGDCILLATIYAG
Sbjct: 361 KALETIRNSSPNDPVLWRILLGSCKIHKNVGVGEIAMNNLNELGATNAGDCILLATIYAG 420

Query: 426 VKDTAGVARMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSHRYSIEIYEKLREVIHQ 485
           V DTAGVA MRK IKSQGIKT+PGWSWIEIGEQVHKFVVDDKSHR SIE+YEKLREV+HQ
Sbjct: 421 VNDTAGVASMRKTIKSQGIKTSPGWSWIEIGEQVHKFVVDDKSHRDSIEVYEKLREVLHQ 480

Query: 486 ASLFGYIGDESAFSLDVFSTAETLDSSCTYHSEKLAIAFGLARTRDGTQLRIVKNLRVCR 545
           ASLFGY+ D           AETL +S TYHSEKLAIAFGLART DGT +RIVKNLRVCR
Sbjct: 481 ASLFGYVID-----------AETLKTSSTYHSEKLAIAFGLARTADGTPIRIVKNLRVCR 540

Query: 546 DCHSFIKAVSVAFNREIIVRDRVRFHHFKDGQCSCNDYW 585
           DCHSF+KAVSVAF+REIIVRDRVRFHHFK GQCSCNDYW
Sbjct: 541 DCHSFMKAVSVAFDREIIVRDRVRFHHFKGGQCSCNDYW 568

[Close]

BLAST of Sed0017156 vs. ExPASy Swiss-Prot
Match: Q9LXY5 (Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H80 PE=2 SV=1)

HSP 1 Score: 706.1 bits (1821), Expect = 3.4e-202
Identity = 345/579 (59.59%), Postives = 436/579 (75.30%), Query Frame = 0


Query: 8   REKAIITLLQGCNSLNKLRKIQAHVIVSGLRHSAAIGNKLLNFCAISVSGSLPYALLLF- 67
           + + I+ +LQGCNS+ KLRKI +HVI++GL+H  +I N LL FCA+SV+GSL +A LLF 
Sbjct: 4   KARVIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFD 63

Query: 68  HQMENPQTEAWNSLIRAFAQSSSPMDAVLHYNRMVCASFSSPDTFTFSFVIKACERLKAE 127
           H   +P T  WN LIR F+ SSSP++++L YNRM+ +S S PD FTF+F +K+CER+K+ 
Sbjct: 64  HFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSI 123

Query: 128 RKFKEVHGSVIRFGYNGDVIVCTNLVKCYAAVGSVCDAQQVFDEMHVRDLVAWNAMISCF 187
            K  E+HGSVIR G+  D IV T+LV+CY+A GSV  A +VFDEM VRDLV+WN MI CF
Sbjct: 124 PKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCF 183

Query: 188 SQQGLHQEALLVYNRMRSENVDVDGFTLVGLISSCAHLGAFNIGVQMHRVARGKGLVESL 247
           S  GLH +AL +Y RM +E V  D +TLV L+SSCAH+ A N+GV +HR+A        +
Sbjct: 184 SHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCV 243

Query: 248 YVGNALIDMYAKCGSLDQAIHIFNRMQRKDIFTWNSMIVGYGVHGRGSEAIFYFQQMLEA 307
           +V NALIDMYAKCGSL+ AI +FN M+++D+ TWNSMI+GYGVHG G EAI +F++M+ +
Sbjct: 244 FVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVAS 303

Query: 308 RMQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRIRPEVKHYGCLVDLYGRAGKLET 367
            ++PN++TFLGLL GCSHQGLV+EGV++F +MSS+F + P VKHYGC+VDLYGRAG+LE 
Sbjct: 304 GVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLEN 363

Query: 368 ALETILNLS-QNDSVLWRILLGSCKIHKNVSIGEIAMKNLSELGATNAGDCILLATIYAG 427
           +LE I   S   D VLWR LLGSCKIH+N+ +GE+AMK L +L A NAGD +L+ +IY+ 
Sbjct: 364 SLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSA 423

Query: 428 VKDTAGVARMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSHRYSIEIYEKLREVIHQ 487
             D    A MRK+I+S  ++T PGWSWIEIG+QVHKFVVDDK H  S  IY +L EVI++
Sbjct: 424 ANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINR 483

Query: 488 ASLFGYIGDESAFSLDVFSTAETLDSSCTYHSEKLAIAFGLARTRDGTQLRIVKNLRVCR 547
           A L GY  ++S  +    S    L S+ T HSEKLAIA+GL RT  GT LRI KNLRVCR
Sbjct: 484 AILAGYKPEDSNRTAPTLSD-RCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCR 543

Query: 548 DCHSFIKAVSVAFNREIIVRDRVRFHHFKDGQCSCNDYW 585
           DCHSF K VS AFNREIIVRDRVRFHHF DG CSCNDYW
Sbjct: 544 DCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581

[Close]

BLAST of Sed0017156 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 446.0 bits (1146), Expect = 6.3e-124
Identity = 236/579 (40.76%), Postives = 354/579 (61.14%), Query Frame = 0


Query: 13  ITLLQ--GCNSLNKLRKIQAHVIVSGLRHSAAIGNKLLNFCAISVSGSLP--YALLLFHQ 72
           I LLQ  G +S+ KLR+I A  I  G+  S A   K L F  +S+    P  YA  +F +
Sbjct: 19  INLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSK 78

Query: 73  MENP-QTEAWNSLIRAFAQSSSPMDAVLHYNRMVCASFSSPDTFTFSFVIKACERLKAER 132
           +E P     WN+LIR +A+  + + A   Y  M  +    PDT T+ F+IKA   +   R
Sbjct: 79  IEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVR 138

Query: 133 KFKEVHGSVIRFGYNGDVIVCTNLVKCYAAVGSVCDAQQVFDEMHVRDLVAWNAMISCFS 192
             + +H  VIR G+   + V  +L+  YA  G V  A +VFD+M  +DLVAWN++I+ F+
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 198

Query: 193 QQGLHQEALLVYNRMRSENVDVDGFTLVGLISSCAHLGAFNIGVQMHRVARGKGLVESLY 252
           + G  +EAL +Y  M S+ +  DGFT+V L+S+CA +GA  +G ++H      GL  +L+
Sbjct: 199 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 258

Query: 253 VGNALIDMYAKCGSLDQAIHIFNRMQRKDIFTWNSMIVGYGVHGRGSEAIFYFQQMLEAR 312
             N L+D+YA+CG +++A  +F+ M  K+  +W S+IVG  V+G G EAI  F+ M    
Sbjct: 259 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 318

Query: 313 -MQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRIRPEVKHYGCLVDLYGRAGKLET 372
            + P  +TF+G+L  CSH G+V+EG +YF  M  +++I P ++H+GC+VDL  RAG+++ 
Sbjct: 319 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 378

Query: 373 ALETILNL-SQNDSVLWRILLGSCKIHKNVSIGEIAMKNLSELGATNAGDCILLATIYAG 432
           A E I ++  Q + V+WR LLG+C +H +  + E A   + +L   ++GD +LL+ +YA 
Sbjct: 379 AYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYAS 438

Query: 433 VKDTAGVARMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSHRYSIEIYEKLREVIHQ 492
            +  + V ++RK +   G+K  PG S +E+G +VH+F++ DKSH  S  IY KL+E+  +
Sbjct: 439 EQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGR 498

Query: 493 ASLFGYIGDESAFSLDVFSTAETLDSSCTYHSEKLAIAFGLARTRDGTQLRIVKNLRVCR 552
               GY+   S   +DV    E  +++  YHSEK+AIAF L  T + + + +VKNLRVC 
Sbjct: 499 LRSEGYVPQISNVYVDV--EEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCA 558

Query: 553 DCHSFIKAVSVAFNREIIVRDRVRFHHFKDGQCSCNDYW 585
           DCH  IK VS  +NREI+VRDR RFHHFK+G CSC DYW
Sbjct: 559 DCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595

[Close]

BLAST of Sed0017156 vs. ExPASy Swiss-Prot
Match: Q8LK93 (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H26 PE=2 SV=2)

HSP 1 Score: 419.1 bits (1076), Expect = 8.3e-116
Identity = 221/574 (38.50%), Postives = 341/574 (59.41%), Query Frame = 0


Query: 13  ITLLQGCNSLNKLRKIQAHVIVSGLRHSAAIGNKLLNFCAIS-VSGSLPYALLLFHQMEN 72
           I L+  CNSL +L +IQA+ I S +   + +  KL+NFC  S    S+ YA  LF  M  
Sbjct: 33  ILLISKCNSLRELMQIQAYAIKSHIEDVSFVA-KLINFCTESPTESSMSYARHLFEAMSE 92

Query: 73  PQTEAWNSLIRAFAQSSSPMDAVLHYNRMVCASFSSPDTFTFSFVIKACERLKAERKFKE 132
           P    +NS+ R +++ ++P++ V      +      PD +TF  ++KAC   KA  + ++
Sbjct: 93  PDIVIFNSMARGYSRFTNPLE-VFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQ 152

Query: 133 VHGSVIRFGYNGDVIVCTNLVKCYAAVGSVCDAQQVFDEMHVRDLVAWNAMISCFSQQGL 192
           +H   ++ G + +V VC  L+  Y     V  A+ VFD +    +V +NAMI+ ++++  
Sbjct: 153 LHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNR 212

Query: 193 HQEALLVYNRMRSENVDVDGFTLVGLISSCAHLGAFNIGVQMHRVARGKGLVESLYVGNA 252
             EAL ++  M+ + +  +  TL+ ++SSCA LG+ ++G  +H+ A+     + + V  A
Sbjct: 213 PNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTA 272

Query: 253 LIDMYAKCGSLDQAIHIFNRMQRKDIFTWNSMIVGYGVHGRGSEAIFYFQQMLEARMQPN 312
           LIDM+AKCGSLD A+ IF +M+ KD   W++MIV Y  HG+  +++  F++M    +QP+
Sbjct: 273 LIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPD 332

Query: 313 SVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRIRPEVKHYGCLVDLYGRAGKLETALETI 372
            +TFLGLL  CSH G V+EG KYF+ M SKF I P +KHYG +VDL  RAG LE A E I
Sbjct: 333 EITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFI 392

Query: 373 LNLSQNDS-VLWRILLGSCKIHKNVSIGEIAMKNLSELGATNAGDCILLATIYAGVKDTA 432
             L  + + +LWRILL +C  H N+ + E   + + EL  ++ GD ++L+ +YA  K   
Sbjct: 393 DKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWE 452

Query: 433 GVARMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSHRYSIEIYEKLREVIHQASLFG 492
            V  +RK++K +     PG S IE+   VH+F   D     + +++  L E++ +  L G
Sbjct: 453 YVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSG 512

Query: 493 YIGDESAFSLDVFSTAETLDSSCTYHSEKLAIAFGLARTRDGTQLRIVKNLRVCRDCHSF 552
           Y+ D S   +      +  + +  YHSEKLAI FGL  T  GT +R+VKNLRVCRDCH+ 
Sbjct: 513 YVPDTS-MVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNA 572

Query: 553 IKAVSVAFNREIIVRDRVRFHHFKDGQCSCNDYW 585
            K +S+ F R++++RD  RFHHF+DG+CSC D+W
Sbjct: 573 AKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603

[Close]

BLAST of Sed0017156 vs. ExPASy Swiss-Prot
Match: Q9FX24 (Pentatricopeptide repeat-containing protein At1g34160 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H68 PE=2 SV=2)

HSP 1 Score: 417.2 bits (1071), Expect = 3.2e-115
Identity = 219/581 (37.69%), Postives = 336/581 (57.83%), Query Frame = 0


Query: 14  TLLQGCNSLNKLRKIQAHVIVSGLRHSAAIGNKLLNFCAISVSGSLPYALLLFHQMENPQ 73
           T++Q C S ++++++Q+H + +G   S+ + ++LL  CAIS  G L +A+ +F  +  P 
Sbjct: 8   TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL 67

Query: 74  TEAWNSLIRAFAQSSSPMDAVLHYNRMVCASFSSP-----DTFTFSFVIKACERLKAERK 133
           T  WN++IR FA SS P  A   Y  M+  S SS      D  T SF +KAC R      
Sbjct: 68  TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127

Query: 134 FKEVHGSVIRFGYNGDVIVCTNLVKCYAAVGSVCDAQQVFDEMHVRDLVAWNAMISCFSQ 193
             ++H  + R G + D ++CT L+  Y+  G +  A ++FDEM VRD+ +WNA+I+    
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVS 187

Query: 194 QGLHQEALLVYNRMRSENVDVDGFTLVGLISSCAHLGAFNIGVQMHRVARGKGLVESLYV 253
                EA+ +Y RM +E +     T+V  + +C+HLG    G  +          +++ V
Sbjct: 188 GNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSN----DNVIV 247

Query: 254 GNALIDMYAKCGSLDQAIHIFNRMQ-RKDIFTWNSMIVGYGVHGRGSEAIFYFQQMLEAR 313
            NA IDMY+KCG +D+A  +F +   +K + TWN+MI G+ VHG    A+  F ++ +  
Sbjct: 248 SNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNG 307

Query: 314 MQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRIRPEVKHYGCLVDLYGRAGKLETA 373
           ++P+ V++L  L  C H GLV+ G+  FN M+ K  +   +KHYGC+VDL  RAG+L  A
Sbjct: 308 IKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREA 367

Query: 374 LETILNLSQ-NDSVLWRILLGSCKIHKNVSIGEIAMKNLSELGATNAGDCILLATIYAGV 433
            + I ++S   D VLW+ LLG+ +I+ +V + EIA + + E+G  N GD +LL+ +YA  
Sbjct: 368 HDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQ 427

Query: 434 KDTAGVARMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSHRYSIEIYEKLREVIHQA 493
                V R+R  ++S+ +K  PG S+IE    +H+F   DKSH    EIYEK+ E+  + 
Sbjct: 428 GRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKI 487

Query: 494 SLFGYIGDESAFSLDVFSTAETLDSSCTYHSEKLAIAFGLAR---TRDGTQLRIVKNLRV 553
              GY+        D+    E  +++  YHSEKLA+A+GL       + + +R++ NLR+
Sbjct: 488 REDGYVAQTGLVLHDI--GEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRI 547

Query: 554 CRDCHSFIKAVSVAFNREIIVRDRVRFHHFKDGQCSCNDYW 585
           C DCH   K +S  + REIIVRDRVRFH FKDG CSC D+W
Sbjct: 548 CGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581

[Close]

BLAST of Sed0017156 vs. ExPASy Swiss-Prot
Match: Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 4.6e-114
Identity = 222/628 (35.35%), Postives = 351/628 (55.89%), Query Frame = 0


Query: 7   SREKAIITLLQGCNSLNKLRKIQAHVIVSGLRHSAAIGNKLLNFCAIS--VSGSLPYALL 66
           S   ++   +  C ++  L +I A  I SG         ++L FCA S      L YA  
Sbjct: 21  SHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHK 80

Query: 67  LFHQMENPQTEAWNSLIRAFAQS--SSPMDAVLHYNRMVCASFSSPDTFTFSFVIKACER 126
           +F+QM      +WN++IR F++S     + A+  +  M+   F  P+ FTF  V+KAC +
Sbjct: 81  IFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAK 140

Query: 127 LKAERKFKEVHGSVIRFGYNGDVIVCTNLVKCYAAVGSVCD------------------- 186
               ++ K++HG  +++G+ GD  V +NLV+ Y   G + D                   
Sbjct: 141 TGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTD 200

Query: 187 --------------------------AQQVFDEMHVRDLVAWNAMISCFSQQGLHQEALL 246
                                     A+ +FD+M  R +V+WN MIS +S  G  ++A+ 
Sbjct: 201 RRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVE 260

Query: 247 VYNRMRSENVDVDGFTLVGLISSCAHLGAFNIGVQMHRVARGKGLVESLYVGNALIDMYA 306
           V+  M+  ++  +  TLV ++ + + LG+  +G  +H  A   G+     +G+ALIDMY+
Sbjct: 261 VFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYS 320

Query: 307 KCGSLDQAIHIFNRMQRKDIFTWNSMIVGYGVHGRGSEAIFYFQQMLEARMQPNSVTFLG 366
           KCG +++AIH+F R+ R+++ TW++MI G+ +HG+  +AI  F +M +A ++P+ V ++ 
Sbjct: 321 KCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYIN 380

Query: 367 LLCGCSHQGLVQEGVKYFNLMSSKFRIRPEVKHYGCLVDLYGRAGKLETALETILNLS-Q 426
           LL  CSH GLV+EG +YF+ M S   + P ++HYGC+VDL GR+G L+ A E ILN+  +
Sbjct: 381 LLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIK 440

Query: 427 NDSVLWRILLGSCKIHKNVSIGEIAMKNLSELGATNAGDCILLATIYAGVKDTAGVARMR 486
            D V+W+ LLG+C++  NV +G+     L ++   ++G  + L+ +YA   + + V+ MR
Sbjct: 441 PDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMR 500

Query: 487 KMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSHRYSIEIYEKLREVIHQASLFGYIGDES 546
             +K + I+  PG S I+I   +H+FVV+D SH  + EI   L E+  +  L GY    +
Sbjct: 501 LRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITT 560

Query: 547 AFSLDVFSTAETLDSSCTYHSEKLAIAFGLARTRDGTQLRIVKNLRVCRDCHSFIKAVSV 585
              L++    E  ++   YHSEK+A AFGL  T  G  +RIVKNLR+C DCHS IK +S 
Sbjct: 561 QVLLNL--EEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISK 620

[Close]

BLAST of Sed0017156 vs. ExPASy TrEMBL
Match: A0A6J1D832 (pentatricopeptide repeat-containing protein At3g56550 OS=Momordica charantia OX=3673 GN=LOC111018226 PE=3 SV=1)

HSP 1 Score: 1023.1 bits (2644), Expect = 4.6e-295
Identity = 496/579 (85.66%), Postives = 539/579 (93.09%), Query Frame = 0


Query: 6   MSREKAIITLLQGCNSLNKLRKIQAHVIVSGLRHSAAIGNKLLNFCAISVSGSLPYALLL 65
           MS EKAI+TLLQGCNSLNKLRKI AHVI+SGLRH AAIGNKLLNFCAISVSGSLPYA LL
Sbjct: 1   MSNEKAILTLLQGCNSLNKLRKIHAHVILSGLRHHAAIGNKLLNFCAISVSGSLPYARLL 60

Query: 66  FHQMENPQTEAWNSLIRAFAQSSSPMDAVLHYNRMVCASFSSPDTFTFSFVIKACERLKA 125
           F  M+ PQTEAWNS+IR FAQS+SP++AV++YN+MV AS S PDTFTFSFV+KACERLKA
Sbjct: 61  FRHMDCPQTEAWNSIIRGFAQSASPIEAVVYYNQMVWASLSPPDTFTFSFVLKACERLKA 120

Query: 126 ERKFKEVHGSVIRFGYNGDVIVCTNLVKCYAAVGSVCDAQQVFDEMHVRDLVAWNAMISC 185
           ERK +EVHGSVIR+GY+GDVI+CTNL+KCYAA+G +C AQQVFD+M  RDLVAWNAMISC
Sbjct: 121 ERKCREVHGSVIRWGYDGDVIICTNLMKCYAAMGFICVAQQVFDKMPTRDLVAWNAMISC 180

Query: 186 FSQQGLHQEALLVYNRMRSENVDVDGFTLVGLISSCAHLGAFNIGVQMHRVARGKGLVES 245
           +SQQGLHQEAL  YN+MRS NVDVDGFTLVGL+SSCAHLGA NIGVQMHR AR KGLVES
Sbjct: 181 YSQQGLHQEALETYNQMRSGNVDVDGFTLVGLLSSCAHLGALNIGVQMHRFAREKGLVES 240

Query: 246 LYVGNALIDMYAKCGSLDQAIHIFNRMQRKDIFTWNSMIVGYGVHGRGSEAIFYFQQMLE 305
           LYVGNALIDMYAKCGSLDQAI IF+RMQRKD+FTWNSMIVGYGVHGRG+EAIF FQQMLE
Sbjct: 241 LYVGNALIDMYAKCGSLDQAILIFDRMQRKDVFTWNSMIVGYGVHGRGTEAIFCFQQMLE 300

Query: 306 ARMQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRIRPEVKHYGCLVDLYGRAGKLE 365
           AR+QP+SVTFLGLLCGCSHQGLVQEGVK+FNLMSSKFR+RPEVKHYGCLVDLYGRAGKLE
Sbjct: 301 ARIQPSSVTFLGLLCGCSHQGLVQEGVKFFNLMSSKFRLRPEVKHYGCLVDLYGRAGKLE 360

Query: 366 TALETILNLSQNDSVLWRILLGSCKIHKNVSIGEIAMKNLSELGATNAGDCILLATIYAG 425
            ALE ILN SQND VLWRILLGSCKIHKNV IGEIAM NLS+LGATNAGDCILLATIYAG
Sbjct: 361 KALEIILNSSQNDPVLWRILLGSCKIHKNVGIGEIAMNNLSQLGATNAGDCILLATIYAG 420

Query: 426 VKDTAGVARMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSHRYSIEIYEKLREVIHQ 485
           VK+T+GV RMRKMI+SQGIKTTPGWSWIEIGEQVHKFVVDDKSHRY IE+YEKL+EVIHQ
Sbjct: 421 VKNTSGVVRMRKMIRSQGIKTTPGWSWIEIGEQVHKFVVDDKSHRYYIEVYEKLKEVIHQ 480

Query: 486 ASLFGYIGDESAFSLDVFSTAETLDSSCTYHSEKLAIAFGLARTRDGTQLRIVKNLRVCR 545
           ASLFGYIGD    + DVFST+E L++SC+YHSEKLAIAFGLART DGTQ+RIVKNLRVCR
Sbjct: 481 ASLFGYIGDGYFSTTDVFSTSEILETSCSYHSEKLAIAFGLARTADGTQIRIVKNLRVCR 540

Query: 546 DCHSFIKAVSVAFNREIIVRDRVRFHHFKDGQCSCNDYW 585
           DCHSF+KAVS+AFNREIIVRDRVRFHHFK GQCSCNDYW
Sbjct: 541 DCHSFVKAVSLAFNREIIVRDRVRFHHFKGGQCSCNDYW 579

[Close]

BLAST of Sed0017156 vs. ExPASy TrEMBL
Match: A0A0A0LH20 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G074120 PE=3 SV=1)

HSP 1 Score: 1017.7 bits (2630), Expect = 1.9e-293
Identity = 496/579 (85.66%), Postives = 529/579 (91.36%), Query Frame = 0


Query: 6   MSREKAIITLLQGCNSLNKLRKIQAHVIVSGLRHSAAIGNKLLNFCAISVSGSLPYALLL 65
           MS EKAI+ LLQGCNSL +LRKI AHVIVSGL H   I NKLLNFCAISVSGSL YA LL
Sbjct: 1   MSNEKAILALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQLL 60

Query: 66  FHQMENPQTEAWNSLIRAFAQSSSPMDAVLHYNRMVCASFSSPDTFTFSFVIKACERLKA 125
           FHQME PQTEAWNS+IR FAQSSSP+DA++ YN+MVC SFS PDTFTFSFV+KACER+KA
Sbjct: 61  FHQMECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIKA 120

Query: 126 ERKFKEVHGSVIRFGYNGDVIVCTNLVKCYAAVGSVCDAQQVFDEMHVRDLVAWNAMISC 185
           ERK KEVHGSVIR GY+ DVIVCTNLVKCY+A+GSVC A+QVFD+M  RDLVAWNAMISC
Sbjct: 121 ERKCKEVHGSVIRCGYDADVIVCTNLVKCYSAMGSVCIARQVFDKMPARDLVAWNAMISC 180

Query: 186 FSQQGLHQEALLVYNRMRSENVDVDGFTLVGLISSCAHLGAFNIGVQMHRVARGKGLVES 245
           FSQQGLHQEAL  YN+MRSENVD+DGFTLVGLISSCAHLGA NIGVQMHR AR  GL +S
Sbjct: 181 FSQQGLHQEALQTYNQMRSENVDIDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQS 240

Query: 246 LYVGNALIDMYAKCGSLDQAIHIFNRMQRKDIFTWNSMIVGYGVHGRGSEAIFYFQQMLE 305
           LYVGNALIDMYAKCGSLDQAI IF+RMQRKDIFTWNSMIVGYGVHGRGSEAI+ FQQMLE
Sbjct: 241 LYVGNALIDMYAKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE 300

Query: 306 ARMQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRIRPEVKHYGCLVDLYGRAGKLE 365
           AR+QPN VTFLGLLCGCSHQGLVQEGVKYFNLMSSKFR++PEVKHYGCLVDLYGRAGKL+
Sbjct: 301 ARIQPNPVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLD 360

Query: 366 TALETILNLSQNDSVLWRILLGSCKIHKNVSIGEIAMKNLSELGATNAGDCILLATIYAG 425
            ALE + N S NDSVLWRILLGSCKIHKNV+IGEIAM  LSELGAT+AGDCILLATIYAG
Sbjct: 361 KALEIVSNSSHNDSVLWRILLGSCKIHKNVTIGEIAMNRLSELGATSAGDCILLATIYAG 420

Query: 426 VKDTAGVARMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSHRYSIEIYEKLREVIHQ 485
            KD AGVARMRKMIKSQG KTTPGWSWIEIGEQVHKFVVDDKSHRYS+E+YEKLREVIHQ
Sbjct: 421 EKDKAGVARMRKMIKSQGKKTTPGWSWIEIGEQVHKFVVDDKSHRYSVEVYEKLREVIHQ 480

Query: 486 ASLFGYIGDESAFSLDVFSTAETLDSSCTYHSEKLAIAFGLARTRDGTQLRIVKNLRVCR 545
           AS FGY+GDES  SLD+ ST ETL +SCTYHSEKLAIAFGLART DGTQ+RIVKNLRVCR
Sbjct: 481 ASFFGYVGDESISSLDMLSTMETLKTSCTYHSEKLAIAFGLARTADGTQIRIVKNLRVCR 540

Query: 546 DCHSFIKAVSVAFNREIIVRDRVRFHHFKDGQCSCNDYW 585
           DCHSFIKAVSVAFNREIIVRDRVRFHHFK G+CSCNDYW
Sbjct: 541 DCHSFIKAVSVAFNREIIVRDRVRFHHFKGGECSCNDYW 579

[Close]

BLAST of Sed0017156 vs. ExPASy TrEMBL
Match: A0A6J1FBZ0 (pentatricopeptide repeat-containing protein At3g56550 OS=Cucurbita moschata OX=3662 GN=LOC111444025 PE=3 SV=1)

HSP 1 Score: 1010.7 bits (2612), Expect = 2.4e-291
Identity = 498/579 (86.01%), Postives = 529/579 (91.36%), Query Frame = 0


Query: 6   MSREKAIITLLQGCNSLNKLRKIQAHVIVSGLRHSAAIGNKLLNFCAISVSGSLPYALLL 65
           MS+EKAI+TLLQGCNSLNKLRKI AHV+VSGLRH  AI NKLLNFCAISVSGSL YA LL
Sbjct: 1   MSKEKAIVTLLQGCNSLNKLRKIHAHVLVSGLRHHVAINNKLLNFCAISVSGSLAYAQLL 60

Query: 66  FHQMENPQTEAWNSLIRAFAQSSSPMDAVLHYNRMVCASFSSPDTFTFSFVIKACERLKA 125
           FHQME  QTEAWNS+IR FAQSSSP+DAV++YN+MVCASFSSPDTFTFSFV+KACERLKA
Sbjct: 61  FHQMECLQTEAWNSIIRGFAQSSSPIDAVVYYNQMVCASFSSPDTFTFSFVLKACERLKA 120

Query: 126 ERKFKEVHGSVIRFGYNGDVIVCTNLVKCYAAVGSVCDAQQVFDEMHVRDLVAWNAMISC 185
           ERK KE+HG++IR GY+GDVI+CTNLVKCYAA+GSVC A QVFDEM VRDLVAWNAMISC
Sbjct: 121 ERKCKEIHGTIIRCGYDGDVIICTNLVKCYAAMGSVCIAHQVFDEMPVRDLVAWNAMISC 180

Query: 186 FSQQGLHQEALLVYNRMRSENVDVDGFTLVGLISSCAHLGAFNIGVQMHRVARGKGLVES 245
           FSQQGLH EAL VYN+MRSENVDVDGFTLVGLISSCAHLGA NIGVQMHR AR KGLVES
Sbjct: 181 FSQQGLHGEALQVYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVES 240

Query: 246 LYVGNALIDMYAKCGSLDQAIHIFNRMQRKDIFTWNSMIVGYGVHGRGSEAIFYFQQMLE 305
           LYVGNALIDMYAKCGSLDQAI IF+RM RKDIFTWNSMIVGYGVHGRG+EAIF F++MLE
Sbjct: 241 LYVGNALIDMYAKCGSLDQAIFIFDRMHRKDIFTWNSMIVGYGVHGRGTEAIFCFERMLE 300

Query: 306 ARMQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRIRPEVKHYGCLVDLYGRAGKLE 365
           ARMQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFR+RPEVKHYGCLVDLYGRAGKLE
Sbjct: 301 ARMQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRLRPEVKHYGCLVDLYGRAGKLE 360

Query: 366 TALETILNLSQNDSVLWRILLGSCKIHKNVSIGEIAMKNLSELGATNAGDCILLATIYAG 425
            ALETI N S ND VLWRILLGSCKIHKNV +GEIAM NL+ELGATNAGDCILLATIYAG
Sbjct: 361 KALETIRNSSPNDPVLWRILLGSCKIHKNVGVGEIAMNNLNELGATNAGDCILLATIYAG 420

Query: 426 VKDTAGVARMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSHRYSIEIYEKLREVIHQ 485
           V DTAGVA MRK IKSQGIKT+PGWSWIEIGEQVHKFVVDDKSHR SIE+YEKLREV+HQ
Sbjct: 421 VNDTAGVASMRKTIKSQGIKTSPGWSWIEIGEQVHKFVVDDKSHRDSIEVYEKLREVLHQ 480

Query: 486 ASLFGYIGDESAFSLDVFSTAETLDSSCTYHSEKLAIAFGLARTRDGTQLRIVKNLRVCR 545
           ASLFGY+ D           AETL +S TYHSEKLAIAFGLART DGT +RIVKNLRVCR
Sbjct: 481 ASLFGYVID-----------AETLKTSSTYHSEKLAIAFGLARTADGTPIRIVKNLRVCR 540

Query: 546 DCHSFIKAVSVAFNREIIVRDRVRFHHFKDGQCSCNDYW 585
           DCHSF+KAVSVAF+REIIVRDRVRFHHFK GQCSCNDYW
Sbjct: 541 DCHSFMKAVSVAFDREIIVRDRVRFHHFKGGQCSCNDYW 568

[Close]

BLAST of Sed0017156 vs. ExPASy TrEMBL
Match: A0A6J1HP16 (pentatricopeptide repeat-containing protein At3g56550 OS=Cucurbita maxima OX=3661 GN=LOC111465370 PE=3 SV=1)

HSP 1 Score: 1007.7 bits (2604), Expect = 2.0e-290
Identity = 498/580 (85.86%), Postives = 529/580 (91.21%), Query Frame = 0


Query: 5   KMSREKAIITLLQGCNSLNKLRKIQAHVIVSGLRHSAAIGNKLLNFCAISVSGSLPYALL 64
           +MS+EKAIITLLQGCNSLNKLRKI AHV+VSGLRH  AI NKLLNFCAISVSGSL YA L
Sbjct: 7   EMSKEKAIITLLQGCNSLNKLRKIHAHVLVSGLRHHVAINNKLLNFCAISVSGSLAYAQL 66

Query: 65  LFHQMENPQTEAWNSLIRAFAQSSSPMDAVLHYNRMVCASFSSPDTFTFSFVIKACERLK 124
           LFHQME  QTEAWNS+IR FAQSSSP+DAV +YN+MVCASFSSPDTFTFSFV+KACERLK
Sbjct: 67  LFHQMECLQTEAWNSIIRGFAQSSSPIDAVAYYNQMVCASFSSPDTFTFSFVLKACERLK 126

Query: 125 AERKFKEVHGSVIRFGYNGDVIVCTNLVKCYAAVGSVCDAQQVFDEMHVRDLVAWNAMIS 184
           AERK KE+HG+VIR GY+GDVI+CTNLVKCYAA+GSVC AQQVFD+M VRDLVAWNA+IS
Sbjct: 127 AERKCKEIHGTVIRCGYDGDVIICTNLVKCYAAMGSVCIAQQVFDKMPVRDLVAWNALIS 186

Query: 185 CFSQQGLHQEALLVYNRMRSENVDVDGFTLVGLISSCAHLGAFNIGVQMHRVARGKGLVE 244
           CFSQQGLH EAL VYN+MRSENV VDGFTLVGLISSCAHLGA NIGVQMHR AR KGLVE
Sbjct: 187 CFSQQGLHGEALQVYNQMRSENVGVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVE 246

Query: 245 SLYVGNALIDMYAKCGSLDQAIHIFNRMQRKDIFTWNSMIVGYGVHGRGSEAIFYFQQML 304
           SLYVGNALIDMYAKCGSLDQAI IF+RM RKDIFTWNSMIVGYGVHGRG+EAIF F++ML
Sbjct: 247 SLYVGNALIDMYAKCGSLDQAIFIFDRMHRKDIFTWNSMIVGYGVHGRGTEAIFCFERML 306

Query: 305 EARMQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRIRPEVKHYGCLVDLYGRAGKL 364
           EARMQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFR+RPEVKHYGCLVDLYGRAGKL
Sbjct: 307 EARMQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRLRPEVKHYGCLVDLYGRAGKL 366

Query: 365 ETALETILNLSQNDSVLWRILLGSCKIHKNVSIGEIAMKNLSELGATNAGDCILLATIYA 424
           E ALETI N S ND VLWRILLGSCKIHKNV +GEIAM NL+ELGATNAGDCILLATIYA
Sbjct: 367 EKALETIRNSSPNDPVLWRILLGSCKIHKNVGVGEIAMNNLNELGATNAGDCILLATIYA 426

Query: 425 GVKDTAGVARMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSHRYSIEIYEKLREVIH 484
           GV DTAGVA MRK IKSQGIKT+PGWSWIEIGEQVHKFVVDDKSHR SIE+YE+LREV+H
Sbjct: 427 GVNDTAGVASMRKTIKSQGIKTSPGWSWIEIGEQVHKFVVDDKSHRDSIEVYERLREVLH 486

Query: 485 QASLFGYIGDESAFSLDVFSTAETLDSSCTYHSEKLAIAFGLARTRDGTQLRIVKNLRVC 544
           QASLFGYI D           AETL +S TYHSEKLAIAFGLART DGT +RIVKNLRVC
Sbjct: 487 QASLFGYIRD-----------AETLKTSTTYHSEKLAIAFGLARTADGTPIRIVKNLRVC 546

Query: 545 RDCHSFIKAVSVAFNREIIVRDRVRFHHFKDGQCSCNDYW 585
           RDCHSF+KAVSVAF+REIIVRDRVRFHHFK GQCSCNDYW
Sbjct: 547 RDCHSFMKAVSVAFDREIIVRDRVRFHHFKGGQCSCNDYW 575

[Close]

BLAST of Sed0017156 vs. ExPASy TrEMBL
Match: A0A1S4DU66 (pentatricopeptide repeat-containing protein At3g56550 OS=Cucumis melo OX=3656 GN=LOC103485901 PE=3 SV=1)

HSP 1 Score: 1003.0 bits (2592), Expect = 5.0e-289
Identity = 492/579 (84.97%), Postives = 527/579 (91.02%), Query Frame = 0


Query: 6   MSREKAIITLLQGCNSLNKLRKIQAHVIVSGLRHSAAIGNKLLNFCAISVSGSLPYALLL 65
           MS+EKAI+TLLQGCNSL +LRKI AHVIVSGL H  AI NKLLNFCAISVSGSL YA LL
Sbjct: 1   MSKEKAILTLLQGCNSLKRLRKIHAHVIVSGLHHHVAIANKLLNFCAISVSGSLAYAQLL 60

Query: 66  FHQMENPQTEAWNSLIRAFAQSSSPMDAVLHYNRMVCASFSSPDTFTFSFVIKACERLKA 125
           FHQ E PQTEAWNS+IR FAQSSSP+DA++ YN+MV  SFS  DTFTFSFV+KACER+KA
Sbjct: 61  FHQTEFPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVWDSFSMRDTFTFSFVLKACERIKA 120

Query: 126 ERKFKEVHGSVIRFGYNGDVIVCTNLVKCYAAVGSVCDAQQVFDEMHVRDLVAWNAMISC 185
           ERK KEVHG+VIR GY+ DVIVCTNLVKCY+A+GSV  A+QVFD+M  RDLVAWNAMISC
Sbjct: 121 ERKCKEVHGTVIRCGYDADVIVCTNLVKCYSAMGSVYIARQVFDKMPARDLVAWNAMISC 180

Query: 186 FSQQGLHQEALLVYNRMRSENVDVDGFTLVGLISSCAHLGAFNIGVQMHRVARGKGLVES 245
           FSQQGLHQEAL  YN+MRSENVD+DGFTLVGLISSCAHLGA NIGVQMHR AR  GL +S
Sbjct: 181 FSQQGLHQEALQTYNQMRSENVDIDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQS 240

Query: 246 LYVGNALIDMYAKCGSLDQAIHIFNRMQRKDIFTWNSMIVGYGVHGRGSEAIFYFQQMLE 305
           LYVGNALIDMYAKCGSLDQAI IF+RMQRKDIFTWNSMIVGYGVHGRGSEAI+ FQQMLE
Sbjct: 241 LYVGNALIDMYAKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE 300

Query: 306 ARMQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRIRPEVKHYGCLVDLYGRAGKLE 365
           AR+QPNS+TFLGLLCGCSHQGLVQEGVKYFNLMSSKFR+RPEVKHYGCLVDLYGRAGKLE
Sbjct: 301 ARIQPNSITFLGLLCGCSHQGLVQEGVKYFNLMSSKFRLRPEVKHYGCLVDLYGRAGKLE 360

Query: 366 TALETILNLSQNDSVLWRILLGSCKIHKNVSIGEIAMKNLSELGATNAGDCILLATIYAG 425
            ALE + N S NDSVLWR LLGSCKIHKNV+IGEIAM  L ELGAT+AGDCILLATIYAG
Sbjct: 361 KALEIVSNSSHNDSVLWRTLLGSCKIHKNVTIGEIAMNRLFELGATSAGDCILLATIYAG 420

Query: 426 VKDTAGVARMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSHRYSIEIYEKLREVIHQ 485
             D AGV+RMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKS+RYSIE+YEKLREVI+Q
Sbjct: 421 ENDKAGVSRMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSNRYSIEVYEKLREVIYQ 480

Query: 486 ASLFGYIGDESAFSLDVFSTAETLDSSCTYHSEKLAIAFGLARTRDGTQLRIVKNLRVCR 545
           AS FGY+GDES  SLDV ST ETL +SCTYHSEKLAIAFGLART DGTQ+RIVKNLRVCR
Sbjct: 481 ASFFGYVGDESVSSLDVLSTIETLKTSCTYHSEKLAIAFGLARTADGTQIRIVKNLRVCR 540

Query: 546 DCHSFIKAVSVAFNREIIVRDRVRFHHFKDGQCSCNDYW 585
           DCHSFIKAVSVAFNREIIVRDRVRFHHFK G+CSCNDYW
Sbjct: 541 DCHSFIKAVSVAFNREIIVRDRVRFHHFKGGKCSCNDYW 579

[Close]

BLAST of Sed0017156 vs. TAIR 10
Match: AT3G56550.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 706.1 bits (1821), Expect = 2.4e-203
Identity = 345/579 (59.59%), Postives = 436/579 (75.30%), Query Frame = 0


Query: 8   REKAIITLLQGCNSLNKLRKIQAHVIVSGLRHSAAIGNKLLNFCAISVSGSLPYALLLF- 67
           + + I+ +LQGCNS+ KLRKI +HVI++GL+H  +I N LL FCA+SV+GSL +A LLF 
Sbjct: 4   KARVIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFD 63

Query: 68  HQMENPQTEAWNSLIRAFAQSSSPMDAVLHYNRMVCASFSSPDTFTFSFVIKACERLKAE 127
           H   +P T  WN LIR F+ SSSP++++L YNRM+ +S S PD FTF+F +K+CER+K+ 
Sbjct: 64  HFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSI 123

Query: 128 RKFKEVHGSVIRFGYNGDVIVCTNLVKCYAAVGSVCDAQQVFDEMHVRDLVAWNAMISCF 187
            K  E+HGSVIR G+  D IV T+LV+CY+A GSV  A +VFDEM VRDLV+WN MI CF
Sbjct: 124 PKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCF 183

Query: 188 SQQGLHQEALLVYNRMRSENVDVDGFTLVGLISSCAHLGAFNIGVQMHRVARGKGLVESL 247
           S  GLH +AL +Y RM +E V  D +TLV L+SSCAH+ A N+GV +HR+A        +
Sbjct: 184 SHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCV 243

Query: 248 YVGNALIDMYAKCGSLDQAIHIFNRMQRKDIFTWNSMIVGYGVHGRGSEAIFYFQQMLEA 307
           +V NALIDMYAKCGSL+ AI +FN M+++D+ TWNSMI+GYGVHG G EAI +F++M+ +
Sbjct: 244 FVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVAS 303

Query: 308 RMQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRIRPEVKHYGCLVDLYGRAGKLET 367
            ++PN++TFLGLL GCSHQGLV+EGV++F +MSS+F + P VKHYGC+VDLYGRAG+LE 
Sbjct: 304 GVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLEN 363

Query: 368 ALETILNLS-QNDSVLWRILLGSCKIHKNVSIGEIAMKNLSELGATNAGDCILLATIYAG 427
           +LE I   S   D VLWR LLGSCKIH+N+ +GE+AMK L +L A NAGD +L+ +IY+ 
Sbjct: 364 SLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSA 423

Query: 428 VKDTAGVARMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSHRYSIEIYEKLREVIHQ 487
             D    A MRK+I+S  ++T PGWSWIEIG+QVHKFVVDDK H  S  IY +L EVI++
Sbjct: 424 ANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINR 483

Query: 488 ASLFGYIGDESAFSLDVFSTAETLDSSCTYHSEKLAIAFGLARTRDGTQLRIVKNLRVCR 547
           A L GY  ++S  +    S    L S+ T HSEKLAIA+GL RT  GT LRI KNLRVCR
Sbjct: 484 AILAGYKPEDSNRTAPTLSD-RCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCR 543

Query: 548 DCHSFIKAVSVAFNREIIVRDRVRFHHFKDGQCSCNDYW 585
           DCHSF K VS AFNREIIVRDRVRFHHF DG CSCNDYW
Sbjct: 544 DCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581

[Close]

BLAST of Sed0017156 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 446.0 bits (1146), Expect = 4.5e-125
Identity = 236/579 (40.76%), Postives = 354/579 (61.14%), Query Frame = 0


Query: 13  ITLLQ--GCNSLNKLRKIQAHVIVSGLRHSAAIGNKLLNFCAISVSGSLP--YALLLFHQ 72
           I LLQ  G +S+ KLR+I A  I  G+  S A   K L F  +S+    P  YA  +F +
Sbjct: 19  INLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSK 78

Query: 73  MENP-QTEAWNSLIRAFAQSSSPMDAVLHYNRMVCASFSSPDTFTFSFVIKACERLKAER 132
           +E P     WN+LIR +A+  + + A   Y  M  +    PDT T+ F+IKA   +   R
Sbjct: 79  IEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVR 138

Query: 133 KFKEVHGSVIRFGYNGDVIVCTNLVKCYAAVGSVCDAQQVFDEMHVRDLVAWNAMISCFS 192
             + +H  VIR G+   + V  +L+  YA  G V  A +VFD+M  +DLVAWN++I+ F+
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 198

Query: 193 QQGLHQEALLVYNRMRSENVDVDGFTLVGLISSCAHLGAFNIGVQMHRVARGKGLVESLY 252
           + G  +EAL +Y  M S+ +  DGFT+V L+S+CA +GA  +G ++H      GL  +L+
Sbjct: 199 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 258

Query: 253 VGNALIDMYAKCGSLDQAIHIFNRMQRKDIFTWNSMIVGYGVHGRGSEAIFYFQQMLEAR 312
             N L+D+YA+CG +++A  +F+ M  K+  +W S+IVG  V+G G EAI  F+ M    
Sbjct: 259 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 318

Query: 313 -MQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRIRPEVKHYGCLVDLYGRAGKLET 372
            + P  +TF+G+L  CSH G+V+EG +YF  M  +++I P ++H+GC+VDL  RAG+++ 
Sbjct: 319 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 378

Query: 373 ALETILNL-SQNDSVLWRILLGSCKIHKNVSIGEIAMKNLSELGATNAGDCILLATIYAG 432
           A E I ++  Q + V+WR LLG+C +H +  + E A   + +L   ++GD +LL+ +YA 
Sbjct: 379 AYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYAS 438

Query: 433 VKDTAGVARMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSHRYSIEIYEKLREVIHQ 492
            +  + V ++RK +   G+K  PG S +E+G +VH+F++ DKSH  S  IY KL+E+  +
Sbjct: 439 EQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGR 498

Query: 493 ASLFGYIGDESAFSLDVFSTAETLDSSCTYHSEKLAIAFGLARTRDGTQLRIVKNLRVCR 552
               GY+   S   +DV    E  +++  YHSEK+AIAF L  T + + + +VKNLRVC 
Sbjct: 499 LRSEGYVPQISNVYVDV--EEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCA 558

Query: 553 DCHSFIKAVSVAFNREIIVRDRVRFHHFKDGQCSCNDYW 585
           DCH  IK VS  +NREI+VRDR RFHHFK+G CSC DYW
Sbjct: 559 DCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595

[Close]

BLAST of Sed0017156 vs. TAIR 10
Match: AT2G02980.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 419.1 bits (1076), Expect = 5.9e-117
Identity = 221/574 (38.50%), Postives = 341/574 (59.41%), Query Frame = 0


Query: 13  ITLLQGCNSLNKLRKIQAHVIVSGLRHSAAIGNKLLNFCAIS-VSGSLPYALLLFHQMEN 72
           I L+  CNSL +L +IQA+ I S +   + +  KL+NFC  S    S+ YA  LF  M  
Sbjct: 33  ILLISKCNSLRELMQIQAYAIKSHIEDVSFVA-KLINFCTESPTESSMSYARHLFEAMSE 92

Query: 73  PQTEAWNSLIRAFAQSSSPMDAVLHYNRMVCASFSSPDTFTFSFVIKACERLKAERKFKE 132
           P    +NS+ R +++ ++P++ V      +      PD +TF  ++KAC   KA  + ++
Sbjct: 93  PDIVIFNSMARGYSRFTNPLE-VFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQ 152

Query: 133 VHGSVIRFGYNGDVIVCTNLVKCYAAVGSVCDAQQVFDEMHVRDLVAWNAMISCFSQQGL 192
           +H   ++ G + +V VC  L+  Y     V  A+ VFD +    +V +NAMI+ ++++  
Sbjct: 153 LHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNR 212

Query: 193 HQEALLVYNRMRSENVDVDGFTLVGLISSCAHLGAFNIGVQMHRVARGKGLVESLYVGNA 252
             EAL ++  M+ + +  +  TL+ ++SSCA LG+ ++G  +H+ A+     + + V  A
Sbjct: 213 PNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTA 272

Query: 253 LIDMYAKCGSLDQAIHIFNRMQRKDIFTWNSMIVGYGVHGRGSEAIFYFQQMLEARMQPN 312
           LIDM+AKCGSLD A+ IF +M+ KD   W++MIV Y  HG+  +++  F++M    +QP+
Sbjct: 273 LIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPD 332

Query: 313 SVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRIRPEVKHYGCLVDLYGRAGKLETALETI 372
            +TFLGLL  CSH G V+EG KYF+ M SKF I P +KHYG +VDL  RAG LE A E I
Sbjct: 333 EITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFI 392

Query: 373 LNLSQNDS-VLWRILLGSCKIHKNVSIGEIAMKNLSELGATNAGDCILLATIYAGVKDTA 432
             L  + + +LWRILL +C  H N+ + E   + + EL  ++ GD ++L+ +YA  K   
Sbjct: 393 DKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWE 452

Query: 433 GVARMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSHRYSIEIYEKLREVIHQASLFG 492
            V  +RK++K +     PG S IE+   VH+F   D     + +++  L E++ +  L G
Sbjct: 453 YVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSG 512

Query: 493 YIGDESAFSLDVFSTAETLDSSCTYHSEKLAIAFGLARTRDGTQLRIVKNLRVCRDCHSF 552
           Y+ D S   +      +  + +  YHSEKLAI FGL  T  GT +R+VKNLRVCRDCH+ 
Sbjct: 513 YVPDTS-MVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNA 572

Query: 553 IKAVSVAFNREIIVRDRVRFHHFKDGQCSCNDYW 585
            K +S+ F R++++RD  RFHHF+DG+CSC D+W
Sbjct: 573 AKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603

[Close]

BLAST of Sed0017156 vs. TAIR 10
Match: AT1G34160.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 417.2 bits (1071), Expect = 2.2e-116
Identity = 219/581 (37.69%), Postives = 336/581 (57.83%), Query Frame = 0


Query: 14  TLLQGCNSLNKLRKIQAHVIVSGLRHSAAIGNKLLNFCAISVSGSLPYALLLFHQMENPQ 73
           T++Q C S ++++++Q+H + +G   S+ + ++LL  CAIS  G L +A+ +F  +  P 
Sbjct: 8   TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL 67

Query: 74  TEAWNSLIRAFAQSSSPMDAVLHYNRMVCASFSSP-----DTFTFSFVIKACERLKAERK 133
           T  WN++IR FA SS P  A   Y  M+  S SS      D  T SF +KAC R      
Sbjct: 68  TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127

Query: 134 FKEVHGSVIRFGYNGDVIVCTNLVKCYAAVGSVCDAQQVFDEMHVRDLVAWNAMISCFSQ 193
             ++H  + R G + D ++CT L+  Y+  G +  A ++FDEM VRD+ +WNA+I+    
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVS 187

Query: 194 QGLHQEALLVYNRMRSENVDVDGFTLVGLISSCAHLGAFNIGVQMHRVARGKGLVESLYV 253
                EA+ +Y RM +E +     T+V  + +C+HLG    G  +          +++ V
Sbjct: 188 GNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSN----DNVIV 247

Query: 254 GNALIDMYAKCGSLDQAIHIFNRMQ-RKDIFTWNSMIVGYGVHGRGSEAIFYFQQMLEAR 313
            NA IDMY+KCG +D+A  +F +   +K + TWN+MI G+ VHG    A+  F ++ +  
Sbjct: 248 SNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNG 307

Query: 314 MQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRIRPEVKHYGCLVDLYGRAGKLETA 373
           ++P+ V++L  L  C H GLV+ G+  FN M+ K  +   +KHYGC+VDL  RAG+L  A
Sbjct: 308 IKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREA 367

Query: 374 LETILNLSQ-NDSVLWRILLGSCKIHKNVSIGEIAMKNLSELGATNAGDCILLATIYAGV 433
            + I ++S   D VLW+ LLG+ +I+ +V + EIA + + E+G  N GD +LL+ +YA  
Sbjct: 368 HDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQ 427

Query: 434 KDTAGVARMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSHRYSIEIYEKLREVIHQA 493
                V R+R  ++S+ +K  PG S+IE    +H+F   DKSH    EIYEK+ E+  + 
Sbjct: 428 GRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKI 487

Query: 494 SLFGYIGDESAFSLDVFSTAETLDSSCTYHSEKLAIAFGLAR---TRDGTQLRIVKNLRV 553
              GY+        D+    E  +++  YHSEKLA+A+GL       + + +R++ NLR+
Sbjct: 488 REDGYVAQTGLVLHDI--GEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRI 547

Query: 554 CRDCHSFIKAVSVAFNREIIVRDRVRFHHFKDGQCSCNDYW 585
           C DCH   K +S  + REIIVRDRVRFH FKDG CSC D+W
Sbjct: 548 CGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581

[Close]

BLAST of Sed0017156 vs. TAIR 10
Match: AT1G31920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 413.3 bits (1061), Expect = 3.2e-115
Identity = 212/581 (36.49%), Postives = 352/581 (60.59%), Query Frame = 0


Query: 8   REKAIITLLQGCNSLNKLRKIQAHVIVSGLRHSAAI-GNKLLNFCAIS-VSGSLPYALLL 67
           +E+  + LL+ C+++++ +++ A  I   L +S++   + +L  CA S    S+ YA  +
Sbjct: 29  KEQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASI 88

Query: 68  FHQMENPQTEAWNSLIRAFAQSSSPMDAVLHYNRMVCASFSSPDTFTFSFVIKACERLKA 127
           F  +++P T  +N++IR +    S  +A+  YN M+    + PD FT+  ++KAC RLK+
Sbjct: 89  FRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRG-NEPDNFTYPCLLKACTRLKS 148

Query: 128 ERKFKEVHGSVIRFGYNGDVIVCTNLVKCYAAVGSVCDAQQVFDEMHVRDLVAWNAMISC 187
            R+ K++HG V + G   DV V  +L+  Y   G +  +  VF+++  +   +W++M+S 
Sbjct: 149 IREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSA 208

Query: 188 FSQQGLHQEALLVYNRMRSE-NVDVDGFTLVGLISSCAHLGAFNIGVQMHRVARGKGLVE 247
            +  G+  E LL++  M SE N+  +   +V  + +CA+ GA N+G+ +H          
Sbjct: 209 RAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISEL 268

Query: 248 SLYVGNALIDMYAKCGSLDQAIHIFNRMQRKDIFTWNSMIVGYGVHGRGSEAIFYFQQML 307
           ++ V  +L+DMY KCG LD+A+HIF +M++++  T+++MI G  +HG G  A+  F +M+
Sbjct: 269 NIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMI 328

Query: 308 EARMQPNSVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRIRPEVKHYGCLVDLYGRAGKL 367
           +  ++P+ V ++ +L  CSH GLV+EG + F  M  + ++ P  +HYGCLVDL GRAG L
Sbjct: 329 KEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLL 388

Query: 368 ETALETILNLS-QNDSVLWRILLGSCKIHKNVSIGEIAMKNLSELGATNAGDCILLATIY 427
           E ALETI ++  + + V+WR  L  C++ +N+ +G+IA + L +L + N GD +L++ +Y
Sbjct: 389 EEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLY 448

Query: 428 AGVKDTAGVARMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSHRYSIEIYEKLREVI 487
           +  +    VAR R  I  +G+K TPG+S +E+  + H+FV  D+SH    EIY+ L ++ 
Sbjct: 449 SQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQME 508

Query: 488 HQASLFGYIGDESAFSLDVFSTAETLDSSCTYHSEKLAIAFGLARTRDGTQLRIVKNLRV 547
            Q    GY  D +   L+V    E        HS+K+AIAFGL  T  G+ ++I +NLR+
Sbjct: 509 WQLKFEGYSPDLTQILLNV--DEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRM 568

Query: 548 CRDCHSFIKAVSVAFNREIIVRDRVRFHHFKDGQCSCNDYW 585
           C DCH++ K +S+ + REI+VRDR RFH FK G CSC DYW
Sbjct: 569 CSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606

The following BLAST results are available for this feature:

BLAST of Sed0017156 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890323.1	1.6e-302	88.43	pentatricopeptide repeat-containing protein At3g56550 [Benincasa hispida] >XP_03...	[more]
XP_022149932.1	9.6e-295	85.66	pentatricopeptide repeat-containing protein At3g56550 [Momordica charantia] >XP_...	[more]
XP_004152881.1	4.0e-293	85.66	pentatricopeptide repeat-containing protein At3g56550 isoform X1 [Cucumis sativu...	[more]
XP_023537237.1	3.4e-292	86.36	pentatricopeptide repeat-containing protein At3g56550 [Cucurbita pepo subsp. pep...	[more]
XP_022937704.1	4.9e-291	86.01	pentatricopeptide repeat-containing protein At3g56550 [Cucurbita moschata]	[more]

BLAST of Sed0017156 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXY5	3.4e-202	59.59	Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana OX...	[more]
A8MQA3	6.3e-124	40.76	Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX...	[more]
Q8LK93	8.3e-116	38.50	Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidop...	[more]
Q9FX24	3.2e-115	37.69	Pentatricopeptide repeat-containing protein At1g34160 OS=Arabidopsis thaliana OX...	[more]
Q9FI80	4.6e-114	35.35	Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX...	[more]

BLAST of Sed0017156 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D832	4.6e-295	85.66	pentatricopeptide repeat-containing protein At3g56550 OS=Momordica charantia OX=...	[more]
A0A0A0LH20	1.9e-293	85.66	DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G0741...	[more]
A0A6J1FBZ0	2.4e-291	86.01	pentatricopeptide repeat-containing protein At3g56550 OS=Cucurbita moschata OX=3...	[more]
A0A6J1HP16	2.0e-290	85.86	pentatricopeptide repeat-containing protein At3g56550 OS=Cucurbita maxima OX=366...	[more]
A0A1S4DU66	5.0e-289	84.97	pentatricopeptide repeat-containing protein At3g56550 OS=Cucumis melo OX=3656 GN...	[more]

BLAST of Sed0017156 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56550.1	2.4e-203	59.59	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G21065.1	4.5e-125	40.76	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G02980.1	5.9e-117	38.50	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G34160.1	2.2e-116	37.69	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G31920.1	3.2e-115	36.49	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 351..369 e-value: 0.64 score: 10.4 coord: 76..102 e-value: 0.061 score: 13.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 177..210 e-value: 3.3E-7 score: 28.1 coord: 250..277 e-value: 3.7E-5 score: 21.6 coord: 313..346 e-value: 0.0023 score: 16.0 coord: 278..311 e-value: 2.0E-6 score: 25.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 175..222 e-value: 1.1E-8 score: 35.2 coord: 275..323 e-value: 1.1E-8 score: 35.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 276..310 score: 11.257313
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 245..275 score: 9.185627
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 175..209 score: 11.027125
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 7..123 e-value: 2.1E-10 score: 42.5 coord: 249..485 e-value: 3.3E-35 score: 124.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 124..241 e-value: 8.7E-19 score: 70.1
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 448..574 e-value: 6.8E-33 score: 113.3
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 15..557
None	No IPR available	PANTHER	PTHR47928:SF8	SUBFAMILY NOT NAMED	coord: 15..557

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017156.1	Sed0017156.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding