Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGATTTTTCCTTTTCTCACTCTTTCAACGGTCCTGAAATTTGGAATAAACAAGAAGATTAAAATATGACCGTTCGATGAGTTAAGATCTCTACAGTTTCCAGTTTCTCTTCCAAATAAACTCCATTTTTTTCACTTCTGCATTTTCCCCTTGTTTTTCGTGCAAAGTTTTTGAGCTTTCAACTTTCCCTTTCCCAATCGCCGATTTCATCTTCAACCCCCCGTTTCTCAGCCCTCAGGTAATTTTCTCCATTTTTTTTAATCTGGGTTTCTGTTTTTTCGCCGTTTTGTTGCGTTGTTTGATTAGGTTTCTTCAATTTGTGTGCTTGTGGGTGGGTTTTTCTTCATTTATTTTCCGATTCCCCATTTGCCCATTTTGGATTTGAGGGTTTTTCTTCTGTTTCTAGGGTTTGTTTTTTTGTTGATTTCTACGAGGATGGATTTTGCGCGATGTTCTGATGAATCTAAGGAATCTGAAAATTCATCGTGTTGCGGCAAAGTGGAAGCTCAGCCGGAGATTGTTGAGCTGCGTGTTCCTATTGAGCCTTCAACGCCTGATGCTGATCGAGAGAGTTGTGATTTTGGTTCTGATTCAAAATCCCCACTTACCCTTTTGTTAACTTGTGTTGATTCTTTAGGGGAAAGGGTTATTGAAACAGCCCCTTTAAAGGGTCTTGATTCTGTTGATCCTATTGATCCCATTGATCCCATCGATCCATTATGTAGCCCTAGCACTCCTAAGGATGGTGTTTTTGATCCATTTTCCCCTGGCCCTTCTCATTTGGCTTTAGCTCCAATCACTAGAAAGCATTTTAGTTGCTCGGTTGGGTCGGTTTCTCGTCGTCTTCGGTTCGGTTCTTCTTCTTCTTCTTCATTGCAATTGGTGGAAGCTGAAGAAGAACAATCCATTTCTGATGGTGAGCTTTTGGAAGCTGTTTATGAAAGTCTATTGGAAGTTATTGTCTTCCATCAGGCTGAGGAGTCTCTTGCTCAGCTCTCAAGCTCTCAAAGTGACTGTCCTGATTGTATTACCCCTCCTGCTTCCTTGATTAGTGGGGTTGCTCAAAATTGTCCCGCCGCGCCTGTCAAGCCGTCGAGAAAGGTTCGAAACTTCGACTTGGGTTTGTGCAGAAAGCTTGAGTTCTGACTGTTGTTGCCCTTATGGTGGTTAGCTGCTGATCGTTGCATAGAAGAATGTAGGTAACTGACTCTCGAGATGAATTGCTTGCTAATTTTTCACATCTGACCGTGTTTGTGTACTGGATTATATGACTAGCAAGATCTATGCTGATTATTGTAAATTTTGGAAGTTTTCTTTTGTTGAACAAGCTTGTTGGGTTTGATGTAGTTCTGTATCTTATCAACCCAATTTGGCTAAGAATAGGATTGTTATAAATTATATTGACCAATAAGCCAGTCCTTTTGTTACCCTGATCAGTAAGTTGTTAATATGATATCACTGTTGTTTCATTTGTTGGTTTTATTTGATCTCCTAGGCAG
mRNA sequence
AAAGATTTTTCCTTTTCTCACTCTTTCAACGGTCCTGAAATTTGGAATAAACAAGAAGATTAAAATATGACCGTTCGATGAGTTAAGATCTCTACAGTTTCCAGTTTCTCTTCCAAATAAACTCCATTTTTTTCACTTCTGCATTTTCCCCTTGTTTTTCGTGCAAAGTTTTTGAGCTTTCAACTTTCCCTTTCCCAATCGCCGATTTCATCTTCAACCCCCCGTTTCTCAGCCCTCAGGGTTTGTTTTTTTGTTGATTTCTACGAGGATGGATTTTGCGCGATGTTCTGATGAATCTAAGGAATCTGAAAATTCATCGTGTTGCGGCAAAGTGGAAGCTCAGCCGGAGATTGTTGAGCTGCGTGTTCCTATTGAGCCTTCAACGCCTGATGCTGATCGAGAGAGTTGTGATTTTGGTTCTGATTCAAAATCCCCACTTACCCTTTTGTTAACTTGTGTTGATTCTTTAGGGGAAAGGGTTATTGAAACAGCCCCTTTAAAGGGTCTTGATTCTGTTGATCCTATTGATCCCATTGATCCCATCGATCCATTATGTAGCCCTAGCACTCCTAAGGATGGTGTTTTTGATCCATTTTCCCCTGGCCCTTCTCATTTGGCTTTAGCTCCAATCACTAGAAAGCATTTTAGTTGCTCGGTTGGGTCGGTTTCTCGTCGTCTTCGGTTCGGTTCTTCTTCTTCTTCTTCATTGCAATTGGTGGAAGCTGAAGAAGAACAATCCATTTCTGATGGTGAGCTTTTGGAAGCTGTTTATGAAAGTCTATTGGAAGTTATTGTCTTCCATCAGGCTGAGGAGTCTCTTGCTCAGCTCTCAAGCTCTCAAAGTGACTGTCCTGATTGTATTACCCCTCCTGCTTCCTTGATTAGTGGGGTTGCTCAAAATTGTCCCGCCGCGCCTGTCAAGCCGTCGAGAAAGGTTCGAAACTTCGACTTGGGTTTGTGCAGAAAGCTTGAGTTCTGACTGTTGTTGCCCTTATGGTGGTTAGCTGCTGATCGTTGCATAGAAGAATGTAGGTAACTGACTCTCGAGATGAATTGCTTGCTAATTTTTCACATCTGACCGTGTTTGTGTACTGGATTATATGACTAGCAAGATCTATGCTGATTATTGTAAATTTTGGAAGTTTTCTTTTGTTGAACAAGCTTGTTGGGTTTGATGTAGTTCTGTATCTTATCAACCCAATTTGGCTAAGAATAGGATTGTTATAAATTATATTGACCAATAAGCCAGTCCTTTTGTTACCCTGATCAGTAAGTTGTTAATATGATATCACTGTTGTTTCATTTGTTGGTTTTATTTGATCTCCTAGGCAG
Coding sequence (CDS)
ATGGATTTTGCGCGATGTTCTGATGAATCTAAGGAATCTGAAAATTCATCGTGTTGCGGCAAAGTGGAAGCTCAGCCGGAGATTGTTGAGCTGCGTGTTCCTATTGAGCCTTCAACGCCTGATGCTGATCGAGAGAGTTGTGATTTTGGTTCTGATTCAAAATCCCCACTTACCCTTTTGTTAACTTGTGTTGATTCTTTAGGGGAAAGGGTTATTGAAACAGCCCCTTTAAAGGGTCTTGATTCTGTTGATCCTATTGATCCCATTGATCCCATCGATCCATTATGTAGCCCTAGCACTCCTAAGGATGGTGTTTTTGATCCATTTTCCCCTGGCCCTTCTCATTTGGCTTTAGCTCCAATCACTAGAAAGCATTTTAGTTGCTCGGTTGGGTCGGTTTCTCGTCGTCTTCGGTTCGGTTCTTCTTCTTCTTCTTCATTGCAATTGGTGGAAGCTGAAGAAGAACAATCCATTTCTGATGGTGAGCTTTTGGAAGCTGTTTATGAAAGTCTATTGGAAGTTATTGTCTTCCATCAGGCTGAGGAGTCTCTTGCTCAGCTCTCAAGCTCTCAAAGTGACTGTCCTGATTGTATTACCCCTCCTGCTTCCTTGATTAGTGGGGTTGCTCAAAATTGTCCCGCCGCGCCTGTCAAGCCGTCGAGAAAGGTTCGAAACTTCGACTTGGGTTTGTGCAGAAAGCTTGAGTTCTGA
Protein sequence
MDFARCSDESKESENSSCCGKVEAQPEIVELRVPIEPSTPDADRESCDFGSDSKSPLTLLLTCVDSLGERVIETAPLKGLDSVDPIDPIDPIDPLCSPSTPKDGVFDPFSPGPSHLALAPITRKHFSCSVGSVSRRLRFGSSSSSSLQLVEAEEEQSISDGELLEAVYESLLEVIVFHQAEESLAQLSSSQSDCPDCITPPASLISGVAQNCPAAPVKPSRKVRNFDLGLCRKLEF
Homology
BLAST of Sed0017124 vs. NCBI nr
Match:
XP_004142723.1 (cyclin-dependent protein kinase inhibitor SMR11 isoform X1 [Cucumis sativus] >KGN54478.1 hypothetical protein Csa_012105 [Cucumis sativus])
HSP 1 Score: 335.1 bits (858), Expect = 4.9e-88
Identity = 188/245 (76.73%), Postives = 200/245 (81.63%), Query Frame = 0
Query: 1 MDFARCSDESKESENSS--CCGKVEAQPEIVELRVPIEPSTPDADRESCDFGSDSKSPLT 60
MDFARC+DESKESENSS CC KVE Q EIVELRVPIEPSTPDADRES DF SDSKSP+T
Sbjct: 1 MDFARCTDESKESENSSTKCCSKVETQVEIVELRVPIEPSTPDADRESGDFPSDSKSPIT 60
Query: 61 -------LLLTCVDSLGERVIETAPLKGLDSVDPIDPIDPIDPLCSPSTPKDGVFDPFSP 120
LLLTC+DSLGER APL+ DS DPLCSP TPKDGVFDPFSP
Sbjct: 61 QVVTSKPLLLTCLDSLGERT--EAPLESSDS---------FDPLCSPRTPKDGVFDPFSP 120
Query: 121 GPSHLALAPITRKHFSCSVGSVSRRLRFGSSSSSSLQLVEAEEEQSISDGELLEAVYESL 180
P+HLALAPI+RK+FS SVG V RRL+FG SSSSSLQLVEAEEEQSISD ELLEAVYE+L
Sbjct: 121 APAHLALAPISRKYFSGSVGFVPRRLQFG-SSSSSLQLVEAEEEQSISDSELLEAVYENL 180
Query: 181 LEVIVFHQAEESLAQLSSSQSDCPDCITPPASLISGVAQNCPAAPVKPSRKVRNFDLGLC 237
LEVIV HQAE SLAQLSSSQSD PDC TPP S +SGVAQ CPAAPVKPSRK+RN D+GLC
Sbjct: 181 LEVIVSHQAESSLAQLSSSQSDSPDCNTPPTSFMSGVAQTCPAAPVKPSRKLRNLDMGLC 233
BLAST of Sed0017124 vs. NCBI nr
Match:
XP_008463308.1 (PREDICTED: uncharacterized protein LOC103501496 [Cucumis melo])
HSP 1 Score: 331.3 bits (848), Expect = 7.0e-87
Identity = 186/245 (75.92%), Postives = 199/245 (81.22%), Query Frame = 0
Query: 1 MDFARCSDESKESENSS--CCGKVEAQPEIVELRVPIEPSTPDADRESCDFGSDSKSPLT 60
MDFARC+DESKESEN S CC KVE Q EIVELRVPIEPSTPDADRES DF SDSKSP+T
Sbjct: 76 MDFARCTDESKESENLSTKCCSKVETQLEIVELRVPIEPSTPDADRESGDFPSDSKSPIT 135
Query: 61 -------LLLTCVDSLGERVIETAPLKGLDSVDPIDPIDPIDPLCSPSTPKDGVFDPFSP 120
LLLTC+DSLGER+ APL+ DS DPLCSP TPKDGVFDPFSP
Sbjct: 136 QVVTSKPLLLTCLDSLGERI--EAPLESSDS---------FDPLCSPRTPKDGVFDPFSP 195
Query: 121 GPSHLALAPITRKHFSCSVGSVSRRLRFGSSSSSSLQLVEAEEEQSISDGELLEAVYESL 180
P+HLALAPI+RK+FS SVG V RRL+FG SSSSSLQLVEAEEEQSISD ELLEAVYE+L
Sbjct: 196 APAHLALAPISRKYFSGSVGFVPRRLQFG-SSSSSLQLVEAEEEQSISDSELLEAVYENL 255
Query: 181 LEVIVFHQAEESLAQLSSSQSDCPDCITPPASLISGVAQNCPAAPVKPSRKVRNFDLGLC 237
LEVIV HQAE SLAQ SSSQSD PDC TPP S +SGVAQ CPAAPVKPSRK+RN D+GLC
Sbjct: 256 LEVIVSHQAESSLAQPSSSQSDSPDCNTPPTSFLSGVAQTCPAAPVKPSRKLRNLDMGLC 308
BLAST of Sed0017124 vs. NCBI nr
Match:
KAA0055894.1 (PR domain zinc finger protein 8, putative isoform 1 [Cucumis melo var. makuwa] >TYK06202.1 PR domain zinc finger protein 8, putative isoform 1 [Cucumis melo var. makuwa])
HSP 1 Score: 331.3 bits (848), Expect = 7.0e-87
Identity = 186/245 (75.92%), Postives = 199/245 (81.22%), Query Frame = 0
Query: 1 MDFARCSDESKESENSS--CCGKVEAQPEIVELRVPIEPSTPDADRESCDFGSDSKSPLT 60
MDFARC+DESKESEN S CC KVE Q EIVELRVPIEPSTPDADRES DF SDSKSP+T
Sbjct: 1 MDFARCTDESKESENLSTKCCSKVETQLEIVELRVPIEPSTPDADRESGDFPSDSKSPIT 60
Query: 61 -------LLLTCVDSLGERVIETAPLKGLDSVDPIDPIDPIDPLCSPSTPKDGVFDPFSP 120
LLLTC+DSLGER+ APL+ DS DPLCSP TPKDGVFDPFSP
Sbjct: 61 QVVTSKPLLLTCLDSLGERI--EAPLESSDS---------FDPLCSPRTPKDGVFDPFSP 120
Query: 121 GPSHLALAPITRKHFSCSVGSVSRRLRFGSSSSSSLQLVEAEEEQSISDGELLEAVYESL 180
P+HLALAPI+RK+FS SVG V RRL+FG SSSSSLQLVEAEEEQSISD ELLEAVYE+L
Sbjct: 121 APAHLALAPISRKYFSGSVGFVPRRLQFG-SSSSSLQLVEAEEEQSISDSELLEAVYENL 180
Query: 181 LEVIVFHQAEESLAQLSSSQSDCPDCITPPASLISGVAQNCPAAPVKPSRKVRNFDLGLC 237
LEVIV HQAE SLAQ SSSQSD PDC TPP S +SGVAQ CPAAPVKPSRK+RN D+GLC
Sbjct: 181 LEVIVSHQAESSLAQPSSSQSDSPDCNTPPTSFLSGVAQTCPAAPVKPSRKLRNLDMGLC 233
BLAST of Sed0017124 vs. NCBI nr
Match:
XP_038883894.1 (unknown protein 1 [Benincasa hispida] >XP_038883895.1 unknown protein 1 [Benincasa hispida] >XP_038883896.1 unknown protein 1 [Benincasa hispida])
HSP 1 Score: 322.8 bits (826), Expect = 2.5e-84
Identity = 181/246 (73.58%), Postives = 197/246 (80.08%), Query Frame = 0
Query: 1 MDFARCSDESKESENSS--CCGKVEAQPEIVELRVPIEPSTPDADRESCDFGSDSKSPLT 60
MDFARC+DESKESEN S CC KVEAQPEIVELR P+ PSTPDADRES DF SDSKSPLT
Sbjct: 1 MDFARCTDESKESENLSTKCCNKVEAQPEIVELRAPLGPSTPDADRESGDFLSDSKSPLT 60
Query: 61 -------LLLTCVDSLGERVIETAPLKGLDSVDPIDPIDPIDPLCSPSTPKDGVFDPFSP 120
L LTC+DSL E++ APL+ DS DPLCSP TPKDGVFDPFSP
Sbjct: 61 QVVTSKPLSLTCIDSLDEKI--EAPLEDSDS---------FDPLCSPRTPKDGVFDPFSP 120
Query: 121 GPSHLALAPITRKHFSCSVGSVSRRLRFGSSSSSS-LQLVEAEEEQSISDGELLEAVYES 180
GP+HLALAPI+RK F+ SVG V+RRL+FGSSSSSS LQ+VEAEEEQSISD ELLEAVYE+
Sbjct: 121 GPAHLALAPISRKCFNGSVGFVARRLQFGSSSSSSFLQIVEAEEEQSISDNELLEAVYEN 180
Query: 181 LLEVIVFHQAEESLAQLSSSQSDCPDCITPPASLISGVAQNCPAAPVKPSRKVRNFDLGL 237
LLEVIV HQAE SL QLSSSQSD DC TPP S +SGVAQ CPAAPVKP RK+RN D+GL
Sbjct: 181 LLEVIVSHQAESSLGQLSSSQSDSSDCSTPPTSFVSGVAQTCPAAPVKPLRKLRNLDMGL 235
BLAST of Sed0017124 vs. NCBI nr
Match:
XP_022156261.1 (uncharacterized protein LOC111023190 [Momordica charantia])
HSP 1 Score: 300.1 bits (767), Expect = 1.7e-77
Identity = 172/253 (67.98%), Postives = 195/253 (77.08%), Query Frame = 0
Query: 1 MDFARCSDESKESE--NSSCCGKVEAQPEIVELR-------VPIEPSTPDADRESCDFGS 60
MDFARCSDESKESE +S CC KVEAQPE+VELR P+ P+TPDADRES DF S
Sbjct: 1 MDFARCSDESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPS 60
Query: 61 DSKSPLT-------LLLTCVDSLGERVIETAPLKGLDSVDPIDPIDPIDPLCSPSTPKDG 120
DSKSP T L LTC+DSLGER APL+ + ++ DPLCSP TPKDG
Sbjct: 61 DSKSPHTQVVPNRSLQLTCLDSLGER--SEAPLE--------EGLESSDPLCSPRTPKDG 120
Query: 121 VFDPFSPGPSHLALAPITRKHFSCSVGSVSRRLRFG-SSSSSSLQLVEAEEEQSISDGEL 180
VFDPFSPGP+HLALAP++RK+FS SVG V+RRL+FG SSSSSS+QL E EEQSISD EL
Sbjct: 121 VFDPFSPGPAHLALAPLSRKYFSGSVGFVARRLQFGSSSSSSSMQLEEEAEEQSISDSEL 180
Query: 181 LEAVYESLLEVIVFHQAEESLAQLSSSQSDCPDCITPPASLISGVAQNCPAAPVKPSRKV 237
LEAVYE+LLEVIV +QAE SLAQLSSSQSD +CITPPA +SG+AQ CP AP+KP K
Sbjct: 181 LEAVYENLLEVIVSNQAEASLAQLSSSQSDSSNCITPPAQYLSGIAQTCPPAPIKPLGKF 240
BLAST of Sed0017124 vs. ExPASy Swiss-Prot
Match:
P85192 (Unknown protein 1 OS=Helianthus annuus OX=4232 PE=1 SV=1)
HSP 1 Score: 60.8 bits (146), Expect = 2.3e-08
Identity = 42/117 (35.90%), Postives = 63/117 (53.85%), Query Frame = 0
Query: 126 FSCSVGSVSRRLRFGSSSSSSLQLVEAEE---EQSISDGELLEAVYESLLEVIVFHQAEE 185
F V +++ G+S++ + + E E +G L+E VYES+LE I+ QAE+
Sbjct: 62 FDMCVSGSNQKNNLGTSAAKKKLVFSSNEYVSENECENGSLMETVYESVLEDIICKQAED 121
Query: 186 SLAQLSSSQSDCPDCITPP-ASLISGVAQNCPAAPVKPS--RKVRNFDLGLCRKLEF 237
LA++ S S TPP A+ G+ + CP AP+K R R D+ LCRKL+F
Sbjct: 122 ILAEILVSGSSRDVLKTPPSAARADGLVETCPGAPMKRKQVRNKRTVDMNLCRKLDF 178
BLAST of Sed0017124 vs. ExPASy TrEMBL
Match:
A0A0A0KYB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G337350 PE=4 SV=1)
HSP 1 Score: 335.1 bits (858), Expect = 2.4e-88
Identity = 188/245 (76.73%), Postives = 200/245 (81.63%), Query Frame = 0
Query: 1 MDFARCSDESKESENSS--CCGKVEAQPEIVELRVPIEPSTPDADRESCDFGSDSKSPLT 60
MDFARC+DESKESENSS CC KVE Q EIVELRVPIEPSTPDADRES DF SDSKSP+T
Sbjct: 1 MDFARCTDESKESENSSTKCCSKVETQVEIVELRVPIEPSTPDADRESGDFPSDSKSPIT 60
Query: 61 -------LLLTCVDSLGERVIETAPLKGLDSVDPIDPIDPIDPLCSPSTPKDGVFDPFSP 120
LLLTC+DSLGER APL+ DS DPLCSP TPKDGVFDPFSP
Sbjct: 61 QVVTSKPLLLTCLDSLGERT--EAPLESSDS---------FDPLCSPRTPKDGVFDPFSP 120
Query: 121 GPSHLALAPITRKHFSCSVGSVSRRLRFGSSSSSSLQLVEAEEEQSISDGELLEAVYESL 180
P+HLALAPI+RK+FS SVG V RRL+FG SSSSSLQLVEAEEEQSISD ELLEAVYE+L
Sbjct: 121 APAHLALAPISRKYFSGSVGFVPRRLQFG-SSSSSLQLVEAEEEQSISDSELLEAVYENL 180
Query: 181 LEVIVFHQAEESLAQLSSSQSDCPDCITPPASLISGVAQNCPAAPVKPSRKVRNFDLGLC 237
LEVIV HQAE SLAQLSSSQSD PDC TPP S +SGVAQ CPAAPVKPSRK+RN D+GLC
Sbjct: 181 LEVIVSHQAESSLAQLSSSQSDSPDCNTPPTSFMSGVAQTCPAAPVKPSRKLRNLDMGLC 233
BLAST of Sed0017124 vs. ExPASy TrEMBL
Match:
A0A5A7UL34 (PR domain zinc finger protein 8, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00600 PE=4 SV=1)
HSP 1 Score: 331.3 bits (848), Expect = 3.4e-87
Identity = 186/245 (75.92%), Postives = 199/245 (81.22%), Query Frame = 0
Query: 1 MDFARCSDESKESENSS--CCGKVEAQPEIVELRVPIEPSTPDADRESCDFGSDSKSPLT 60
MDFARC+DESKESEN S CC KVE Q EIVELRVPIEPSTPDADRES DF SDSKSP+T
Sbjct: 1 MDFARCTDESKESENLSTKCCSKVETQLEIVELRVPIEPSTPDADRESGDFPSDSKSPIT 60
Query: 61 -------LLLTCVDSLGERVIETAPLKGLDSVDPIDPIDPIDPLCSPSTPKDGVFDPFSP 120
LLLTC+DSLGER+ APL+ DS DPLCSP TPKDGVFDPFSP
Sbjct: 61 QVVTSKPLLLTCLDSLGERI--EAPLESSDS---------FDPLCSPRTPKDGVFDPFSP 120
Query: 121 GPSHLALAPITRKHFSCSVGSVSRRLRFGSSSSSSLQLVEAEEEQSISDGELLEAVYESL 180
P+HLALAPI+RK+FS SVG V RRL+FG SSSSSLQLVEAEEEQSISD ELLEAVYE+L
Sbjct: 121 APAHLALAPISRKYFSGSVGFVPRRLQFG-SSSSSLQLVEAEEEQSISDSELLEAVYENL 180
Query: 181 LEVIVFHQAEESLAQLSSSQSDCPDCITPPASLISGVAQNCPAAPVKPSRKVRNFDLGLC 237
LEVIV HQAE SLAQ SSSQSD PDC TPP S +SGVAQ CPAAPVKPSRK+RN D+GLC
Sbjct: 181 LEVIVSHQAESSLAQPSSSQSDSPDCNTPPTSFLSGVAQTCPAAPVKPSRKLRNLDMGLC 233
BLAST of Sed0017124 vs. ExPASy TrEMBL
Match:
A0A1S3CIW8 (uncharacterized protein LOC103501496 OS=Cucumis melo OX=3656 GN=LOC103501496 PE=4 SV=1)
HSP 1 Score: 331.3 bits (848), Expect = 3.4e-87
Identity = 186/245 (75.92%), Postives = 199/245 (81.22%), Query Frame = 0
Query: 1 MDFARCSDESKESENSS--CCGKVEAQPEIVELRVPIEPSTPDADRESCDFGSDSKSPLT 60
MDFARC+DESKESEN S CC KVE Q EIVELRVPIEPSTPDADRES DF SDSKSP+T
Sbjct: 76 MDFARCTDESKESENLSTKCCSKVETQLEIVELRVPIEPSTPDADRESGDFPSDSKSPIT 135
Query: 61 -------LLLTCVDSLGERVIETAPLKGLDSVDPIDPIDPIDPLCSPSTPKDGVFDPFSP 120
LLLTC+DSLGER+ APL+ DS DPLCSP TPKDGVFDPFSP
Sbjct: 136 QVVTSKPLLLTCLDSLGERI--EAPLESSDS---------FDPLCSPRTPKDGVFDPFSP 195
Query: 121 GPSHLALAPITRKHFSCSVGSVSRRLRFGSSSSSSLQLVEAEEEQSISDGELLEAVYESL 180
P+HLALAPI+RK+FS SVG V RRL+FG SSSSSLQLVEAEEEQSISD ELLEAVYE+L
Sbjct: 196 APAHLALAPISRKYFSGSVGFVPRRLQFG-SSSSSLQLVEAEEEQSISDSELLEAVYENL 255
Query: 181 LEVIVFHQAEESLAQLSSSQSDCPDCITPPASLISGVAQNCPAAPVKPSRKVRNFDLGLC 237
LEVIV HQAE SLAQ SSSQSD PDC TPP S +SGVAQ CPAAPVKPSRK+RN D+GLC
Sbjct: 256 LEVIVSHQAESSLAQPSSSQSDSPDCNTPPTSFLSGVAQTCPAAPVKPSRKLRNLDMGLC 308
BLAST of Sed0017124 vs. ExPASy TrEMBL
Match:
A0A6J1DUE1 (uncharacterized protein LOC111023190 OS=Momordica charantia OX=3673 GN=LOC111023190 PE=4 SV=1)
HSP 1 Score: 300.1 bits (767), Expect = 8.4e-78
Identity = 172/253 (67.98%), Postives = 195/253 (77.08%), Query Frame = 0
Query: 1 MDFARCSDESKESE--NSSCCGKVEAQPEIVELR-------VPIEPSTPDADRESCDFGS 60
MDFARCSDESKESE +S CC KVEAQPE+VELR P+ P+TPDADRES DF S
Sbjct: 1 MDFARCSDESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPS 60
Query: 61 DSKSPLT-------LLLTCVDSLGERVIETAPLKGLDSVDPIDPIDPIDPLCSPSTPKDG 120
DSKSP T L LTC+DSLGER APL+ + ++ DPLCSP TPKDG
Sbjct: 61 DSKSPHTQVVPNRSLQLTCLDSLGER--SEAPLE--------EGLESSDPLCSPRTPKDG 120
Query: 121 VFDPFSPGPSHLALAPITRKHFSCSVGSVSRRLRFG-SSSSSSLQLVEAEEEQSISDGEL 180
VFDPFSPGP+HLALAP++RK+FS SVG V+RRL+FG SSSSSS+QL E EEQSISD EL
Sbjct: 121 VFDPFSPGPAHLALAPLSRKYFSGSVGFVARRLQFGSSSSSSSMQLEEEAEEQSISDSEL 180
Query: 181 LEAVYESLLEVIVFHQAEESLAQLSSSQSDCPDCITPPASLISGVAQNCPAAPVKPSRKV 237
LEAVYE+LLEVIV +QAE SLAQLSSSQSD +CITPPA +SG+AQ CP AP+KP K
Sbjct: 181 LEAVYENLLEVIVSNQAEASLAQLSSSQSDSSNCITPPAQYLSGIAQTCPPAPIKPLGKF 240
BLAST of Sed0017124 vs. ExPASy TrEMBL
Match:
A0A6J1GG30 (uncharacterized protein LOC111453838 OS=Cucurbita moschata OX=3662 GN=LOC111453838 PE=4 SV=1)
HSP 1 Score: 295.0 bits (754), Expect = 2.7e-76
Identity = 165/242 (68.18%), Postives = 188/242 (77.69%), Query Frame = 0
Query: 1 MDFARCSDESKESEN--SSCCGKVEAQPEIVELRVPIEPSTPDADRESCDFGSDSKSPLT 60
MDFARC+DESKES++ S CC K EAQPEIVELR PIEPSTPDADRES DF SDSKSPLT
Sbjct: 1 MDFARCTDESKESDHSPSKCCSKDEAQPEIVELRAPIEPSTPDADRESSDFPSDSKSPLT 60
Query: 61 LLLTCVDSLGERVIETAPLKGLDSVDPIDPIDPIDPLCSPSTPKDGVFDPFSPGPSHLAL 120
++T R + L S DP++P PLCSP TPKDGVFDPFSPGP+HLAL
Sbjct: 61 QVVT------SRALV------LSSSDPLEP-----PLCSPRTPKDGVFDPFSPGPAHLAL 120
Query: 121 APITRKHFSCSVGSVSRRLRFGS----SSSSSLQLVEAEEEQSISDGELLEAVYESLLEV 180
AP+ RK FS SVG V+RRL+F S SSSSSLQ VE+EEEQ+I+D ELLEAVYE+LLE+
Sbjct: 121 APVCRKCFSGSVGFVARRLQFDSSSSASSSSSLQFVESEEEQTITDSELLEAVYENLLEL 180
Query: 181 IVFHQAEESLAQLSSSQSDCPDCITPPASLISGVAQNCPAAPVKPSRKVRNFDLGLCRKL 237
I+ HQAE SLA ++SS +D DC TPPAS I+G+AQ CPAAPVKPSRK RN DLGLCRKL
Sbjct: 181 IISHQAESSLAMITSSHTDSLDCNTPPASFITGIAQTCPAAPVKPSRKSRNLDLGLCRKL 225
BLAST of Sed0017124 vs. TAIR 10
Match:
AT2G28330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08035.1); Has 18 Blast hits to 18 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 44.7 bits (104), Expect = 1.2e-04
Identity = 50/163 (30.67%), Postives = 76/163 (46.63%), Query Frame = 0
Query: 80 LDSVDPIDPIDPIDPLCSPSTPKDGVFDPFSPGPSHLALAP---ITRKHFSCSVGSVSRR 139
++ +P + + P TP V D S +L+ +T K S +
Sbjct: 1 MEQEEPCEAKETASSSIEPKTPNPNVPDSIPAIDSDSSLSEEEIVTEKDRGIVTLSPLCK 60
Query: 140 LRFGSSSSSSLQLVEAEEEQSISDGELLEAVYESLLEVIVFHQAEESLAQLSSSQSDCPD 199
R S+S S LV SD E++E++Y++LL VI+ Q +S+A + + C D
Sbjct: 61 QRIDSASISDCVLV--------SDDEIIESLYQNLLRVILSLQQIQSVAVV--PEIWCFD 120
Query: 200 -CITPPASL----ISGVAQNCPAAPVKPSRKVRNFDLGLCRKL 235
C TPP S + V+ CP AP+K ++ RN D GL RKL
Sbjct: 121 GCKTPPPSSRNLDSNMVSDTCPGAPMKLTKISRNIDSGLRRKL 153
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_004142723.1 | 4.9e-88 | 76.73 | cyclin-dependent protein kinase inhibitor SMR11 isoform X1 [Cucumis sativus] >KG... | [more] |
XP_008463308.1 | 7.0e-87 | 75.92 | PREDICTED: uncharacterized protein LOC103501496 [Cucumis melo] | [more] |
KAA0055894.1 | 7.0e-87 | 75.92 | PR domain zinc finger protein 8, putative isoform 1 [Cucumis melo var. makuwa] >... | [more] |
XP_038883894.1 | 2.5e-84 | 73.58 | unknown protein 1 [Benincasa hispida] >XP_038883895.1 unknown protein 1 [Beninca... | [more] |
XP_022156261.1 | 1.7e-77 | 67.98 | uncharacterized protein LOC111023190 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
P85192 | 2.3e-08 | 35.90 | Unknown protein 1 OS=Helianthus annuus OX=4232 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KYB8 | 2.4e-88 | 76.73 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G337350 PE=4 SV=1 | [more] |
A0A5A7UL34 | 3.4e-87 | 75.92 | PR domain zinc finger protein 8, putative isoform 1 OS=Cucumis melo var. makuwa ... | [more] |
A0A1S3CIW8 | 3.4e-87 | 75.92 | uncharacterized protein LOC103501496 OS=Cucumis melo OX=3656 GN=LOC103501496 PE=... | [more] |
A0A6J1DUE1 | 8.4e-78 | 67.98 | uncharacterized protein LOC111023190 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1GG30 | 2.7e-76 | 68.18 | uncharacterized protein LOC111453838 OS=Cucurbita moschata OX=3662 GN=LOC1114538... | [more] |
Match Name | E-value | Identity | Description | |
AT2G28330.1 | 1.2e-04 | 30.67 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |