Sed0017102 (gene) Chayote v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCCTAAAAAGGTACGCCGCCGATTGTTGCAATTTCCAGATTCAAATATGCGAATTGAGAAGAAAGATTCATGAATTGAAATATAATTGCTAGTCTGGTAGAGATGAAATTTAGCTGAATTTGATCCGACTTTTCTGCTGGAAAACTGACTTAGGTTTCTCTAGAATTCGTTTTTCCCTTTCGCATAATCAAAATCAAATAACTGTTAGTCCCCGAGGGGTGGTTTAGTGGTTGAAAACTTGGGCTTTGAGGGTATACTCCCTTCAAGGTCTCGAGTTCGAAGTTCACTTTTCACATTACTCCTTCAATGTCTTTGGTGTCTGGCCGGGACGGACGTGCTTATCTTGGTTCAAAAAAAAAGTTTATGAACATAGTTAAAAGTAGCGGAGAAGCCTTTGAATTTTACTTGCATTCATAGTTGGGGTGCTAACAGAACAGTTCTCGACGGGACCCTAGTTTTGGATTCGGCTAACAAGGTATCTGTTAATCATGCGCTTGGCTTGAACTTGTAAACTGAAGTACACATACTAGCACGAGGGGGCAGCGCTATCGAACCTTCTTACGACATTGCGAAGAATTCGTGGGATTTCTCTGTTTCAAGGAAGTTTTATGGCGATGATGCATTCAAGGCTACGTGCCAGACTACAACCAAGGAACTGGGATTAGAATGGACAAGGAATGTGAAGTCCAATGGAAATTTCAAGGTAGGTGATTTTGTTATTTTATTTTTGTAACTTTTTAATGCTTAATCCAGAATTTCTGGTAGGGTAACCTAGCAGTCAAAGGACATTAAGAAACCGAAAAGGTGTGAGTTTAATTGTGTTGACCACCTACCTTGAAATTAATTTTTATTAGTTTTCTTGTCGTGAGAATAGTCAAGGTAACGCATAAGCTGACTCGGAAATTCACGGATAAAAAAGATAAAGAAAAAAAAGAATCTGTGGTATGATTAGTCATTCAAAAGAAGGGAGCTCATATGATGTTTTGTGTACTTTTGAACATGTCTGATTCTTCTAATTGAATCACTATTTAGGAGTTTGATATAATGAAATTATATCGAGCCATATCTGTGAAGGCGCAGGGTTTCCAATAGCTATTACTTGATTTTCTATTGACTTTGCCTCCGGTAATCTGATGTTGATGATTACCCTTTTTATAAAAAAAACATACTTGTTTGGTTTGGGTCGATTATTTTGGGGACTTTATCATCAAGTCTTTGAAAAAAACTCCCTCTCCCACGTGGGGGATTTGAGGAAATTCAAGACATTATTTATTTGGGCCATAGACAAGCGCAGTGTACAAAAGCAAACAGGATAGACACATTCATTGAGTTAGGCTCTGCATTTCCACATTTGTTAACTCTTACTTGGATTCGAAAGTAGTTAGTTTGGGTTCCGTAAAGAGTGGCACGGTGGTCAAAGACTTGGGTTTTGAAGATGTGCTCTCCTCAAGATCTTAGGTTCAAAACTCACATGTGACATTAATTTGTACACCTCCTGCGTCTCCATTCCTTCGATGTCTCCTGGTGCCTGATGTAGGGACAGACATGGTTACCCCGAGTATAGTGGAGTAAAACTTTGATTTCTCGGGTTAAAAAAAAAAGTAGACTAATAGTTGGGGTTGAGTTACACAATGCAGTTCTTTGGAGTGTTAACCTTTCTTTTTAATAAGAAACGAAAACCATTTTCGTTGATTAAGAGGAGAGGGTCAATCTAAGAACAATAAAGCATCAACAAGTCTTGTAACTTTGTTTTGATAGGAGCTGAATCTTATAACTCTCGGGAAGTTGAACATCCAATTCCGGCACCTATGAAAGAAAGAGAGAAGTAGGGTGCGGTTCACTCGAGAAAGAGCAATTGTTTCGCTCACATGAACAATCGCCTTCTTGTCAACAGCTAAATCCATACGAGTTTAAAGGGTGTGGAAGCACTAATAAGAAATGAGTTCAATCCATACGAGTTTTCGGGGTGGGGCTCCATTGACACCCACTTACATGTAGCCAGTTGAAATGAGAACAAAAGTGGTTTCAAGCTGAGGTTCTGGTTGGAATCTGCTGTGTATTTCCACTGAAACTGGTTTGTGGTTTTATCAATTCGTAACTAGATTGTTTATCCTTGGTGGAAATGGCATTGACATTATGGGATAAAAATGTAATAACACCTGACTCAGTGCTGTGCTCTGGTAGCTGAACACGATAGAGAGCCCAGTGGTTAAGAGAGTTTGAAAACCAACAAAATTATGGATTCAATTTATAGCGATTATCTATTTAAGAAATATTTTTCACAAGTTTCTTTAGCATCCAAATATTATACGGTCAGACGATATGTTTGATGAAAATAATTTATTGAAGTGGACGTAAGTTGATTCTAAGTTGATTCTCGATCAAATTATTGCGATAAAATTAATGTAAACTTTCATGTCAGTTTCTTTTAAGCAATCTTTTGTTGTGCAGATTGTAGCATCAGTCTACCTGGCAGATGAATAAATGTCCCTAAAAAGTTGGGGTGCTAACAGAACAGTTCTCGACGGGACCCTAGTTTTGGATTCGGCTAACAAGTTTTATGGCGATGATGCATTCAAGGCTACGTGCCAGACTACAACCAAGGAACTGGGATTAGAATGGACAAGGAATGTGAAGTCCAATGGAAATTTCAAGATTGTAGCATCAGTCTACCTGGCAGATGAATAA ATGTCCCTAAAAAGTTGGGGTGCTAACAGAACAGTTCTCGACGGGACCCTAGTTTTGGATTCGGCTAACAAGTTTTATGGCGATGATGCATTCAAGGCTACGTGCCAGACTACAACCAAGGAACTGGGATTAGAATGGACAAGGAATGTGAAGTCCAATGGAAATTTCAAGATTGTAGCATCAGTCTACCTGGCAGATGAATAA MSLKSWGANRTVLDGTLVLDSANKFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKIVASVYLADE Homology
BLAST of Sed0017102 vs. NCBI nr
Match: XP_038903165.1 (outer envelope pore protein 24, chloroplastic [Benincasa hispida]) HSP 1 Score: 89.4 bits (220), Expect = 1.3e-14 Identity = 53/109 (48.62%), Postives = 57/109 (52.29%), Query Frame = 0
BLAST of Sed0017102 vs. NCBI nr
Match: KAG7037850.1 (Outer envelope pore protein 24, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 86.3 bits (212), Expect = 1.1e-13 Identity = 51/109 (46.79%), Postives = 54/109 (49.54%), Query Frame = 0
BLAST of Sed0017102 vs. NCBI nr
Match: XP_023525922.1 (outer envelope pore protein 24, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 86.3 bits (212), Expect = 1.1e-13 Identity = 51/109 (46.79%), Postives = 54/109 (49.54%), Query Frame = 0
BLAST of Sed0017102 vs. NCBI nr
Match: XP_008466586.1 (PREDICTED: outer envelope pore protein 24, chloroplastic-like [Cucumis melo] >TYK19617.1 outer envelope pore protein 24 [Cucumis melo var. makuwa]) HSP 1 Score: 85.9 bits (211), Expect = 1.5e-13 Identity = 49/109 (44.95%), Postives = 56/109 (51.38%), Query Frame = 0
BLAST of Sed0017102 vs. NCBI nr
Match: XP_022976348.1 (outer envelope pore protein 24B, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 85.5 bits (210), Expect = 1.9e-13 Identity = 51/109 (46.79%), Postives = 54/109 (49.54%), Query Frame = 0
BLAST of Sed0017102 vs. ExPASy Swiss-Prot
Match: O49929 (Outer envelope pore protein 24, chloroplastic OS=Pisum sativum OX=3888 GN=OEP24 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 1.2e-10 Identity = 42/109 (38.53%), Postives = 51/109 (46.79%), Query Frame = 0
BLAST of Sed0017102 vs. ExPASy Swiss-Prot
Match: Q1H5C9 (Outer envelope pore protein 24A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP24A PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.5e-08 Identity = 36/105 (34.29%), Postives = 47/105 (44.76%), Query Frame = 0
BLAST of Sed0017102 vs. ExPASy Swiss-Prot
Match: Q8H0Y1 (Outer envelope pore protein 24B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP24B PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.2e-07 Identity = 37/103 (35.92%), Postives = 49/103 (47.57%), Query Frame = 0
BLAST of Sed0017102 vs. ExPASy Swiss-Prot
Match: B8ANR3 (Outer envelope pore protein 24, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OEP24 PE=3 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 1.2e-05 Identity = 23/44 (52.27%), Postives = 30/44 (68.18%), Query Frame = 0
BLAST of Sed0017102 vs. ExPASy Swiss-Prot
Match: Q75IQ4 (Outer envelope pore protein 24, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=OEP24 PE=2 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 1.2e-05 Identity = 23/44 (52.27%), Postives = 30/44 (68.18%), Query Frame = 0
BLAST of Sed0017102 vs. ExPASy TrEMBL
Match: A0A5D3D7T8 (Outer envelope pore protein 24 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00030 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 7.1e-14 Identity = 49/109 (44.95%), Postives = 56/109 (51.38%), Query Frame = 0
BLAST of Sed0017102 vs. ExPASy TrEMBL
Match: A0A1S3CRS8 (outer envelope pore protein 24, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103503959 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 7.1e-14 Identity = 49/109 (44.95%), Postives = 56/109 (51.38%), Query Frame = 0
BLAST of Sed0017102 vs. ExPASy TrEMBL
Match: A0A6J1ILV0 (outer envelope pore protein 24B, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111476776 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 9.2e-14 Identity = 51/109 (46.79%), Postives = 54/109 (49.54%), Query Frame = 0
BLAST of Sed0017102 vs. ExPASy TrEMBL
Match: A0A6J1J3S8 (outer envelope pore protein 24, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111481014 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.1e-13 Identity = 50/109 (45.87%), Postives = 54/109 (49.54%), Query Frame = 0
BLAST of Sed0017102 vs. ExPASy TrEMBL
Match: A0A0A0LIV8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G855400 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.7e-13 Identity = 48/109 (44.04%), Postives = 56/109 (51.38%), Query Frame = 0
BLAST of Sed0017102 vs. TAIR 10
Match: AT1G45170.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42960.1); Has 60 Blast hits to 60 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 67.4 bits (163), Expect = 5.0e-12 Identity = 32/61 (52.46%), Postives = 45/61 (73.77%), Query Frame = 0
BLAST of Sed0017102 vs. TAIR 10
Match: AT1G45170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42960.1); Has 62 Blast hits to 62 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 58.9 bits (141), Expect = 1.8e-09 Identity = 36/105 (34.29%), Postives = 47/105 (44.76%), Query Frame = 0
BLAST of Sed0017102 vs. TAIR 10
Match: AT5G42960.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 56.6 bits (135), Expect = 8.8e-09 Identity = 37/103 (35.92%), Postives = 49/103 (47.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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