Sed0017099 (gene) Chayote v1

Overview


Name	Sed0017099
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Pentatricopeptide repeat-containing protein
Location	LG01: 15716752 .. 15719090 (+)
RNA-Seq Expression	Sed0017099
Synteny	Sed0017099

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGGGGTTTCGAAATGAAGCTTTTACTTCCACGAAAACGAATGCATCTGATTGCATTCCAAAGAGAATTGGTGCATTTTTACTCTACAACTTCGAAGGATTCACTTTACAGAAGGATTTCACCGGTGGGTGACCCTAATGTCTCTGTAATTCCTGTTCTTGATCAGTGGGTGCTACAAGGCTGGCCTGTTCAGAGAGAAGAACTTCAAAAGATCGTCAAGGAATTGAGGATTTACAAGCGCTTCAATCATGCTCTTGAGGTTTGATTTCTCGTTTTTTTCTTGTTTTTAACGTCGTCATATTTGATTTGTTTGCATCTCTAAGTTGCGGTGCTAGTAGTCGATATACATAGTGATAATCTGGTTGATTGTTTTGGATGATTGAAGCAAATGGGTCCTTGGAATAGTTGGCTTAAGACATTAAGCATACAAACGATTAGCCATTTTTTAACTCTTGAAATGATCTGGTAGATTCGTCTGGTCTCTCCTATGAACTTGTTAAGGCACTAGGATTTTTTTTTTTTTTTTGGATATCTGTGACTGTCTCGGCCTCACCCTACACCGTTTGGATGTCAAGTAAACCTCTATGAAATAAATTCTTAGATGGGTGGTCAGCATGGATGGAACCGGTAACTACTAGGCCACTCCATGATGGTTGGATCACTAGGATTTTGTTTGCGTACTCAATGAAACCATGAAACAAAGTTAGACTCTTGAGGGAGGAGATCTTTTCTATTTACCTTGTAGATTACAAGTGATAGTTGATTTGGGCTGAAATCATATCAGGTAGCTTTCTTTTGTCATTGATAGTTGCATTGCAGCTCTGCCAATACCTTTTGTTGCTGCATAGGTCATTTTCACGCTTATCCTCTGGCTCTCTTTCTCTATTTAAGTTGTTAGCTCTTCTTAAAATGTTTCTTTCAAGAATAACAAATACATTGGGGAGTTGTTTACTTTCCTTATGGTTCTGACATATCAAGGAAGAGAACTTTTGGCTTATTGATTTCATGTTGAAGTTGAGTTATTTGCTATGTTTTATTCGGTATTCTTGTTCTGTATCTTCTCTTGAAACCCCCTTATTCTTCAGGTATCAAAATGGATGAGTGATAAAAGATACCTTCCACTATCGGCTGTTGATATTTCAGAACGGATGAATTTGATCTTAAGAGTTCATGGGTTGGAACAAGTAGAGGATTATTTCAACAGCATTCCAAGTCAATTGAAAAAGTTTCAGGTTCATGTAGCTCTTCTGAATTGCTATGCTCATGAAAAGTGTGTGGATAAAGCCAATATCGTCCTGCAAAAGATGAAGGAAATGGGTTTTGATAGAACACCCCTACCATACAATATCATGATGAATATTTATTATAAAATTGGAGAATATGAGAAATTAGATCCTTTGATGCAAGAAATGGAAGAAAAGGATGTTTCTTATGATCGATTCACATATAGCATCCGGCTGAGTGCATATTCTGCTGCTTCTGATATCGAGGGAGTCGATAAGATTTTGGAACAAATGGAATCAGATCCCAAAATTGTTCTAGATTGGAACTGTTGTGTCATTGCTGCAAATGGTTACCTTAAAGTTGGCTTAGTAGACAAATCCCTTTCTATGCTGAAGAAATCAGAAGGTCTCCTAGCAACTGCCAGAAGGAGAGGTTCTCCTTTTGACATCCTTCTCAAACTATATGCTACAAGTGGAAAGAAAGACGAGTTACACCGTGTCTGGAATCTCTACAAGAAGGAAAAAGTCTACAACAAAGGTTATATGAGTATGATGAGATCACTTTTGATATTGGACGATATCAAAGCTGCCGAGCATATATTCAAGGAGTGGGAGACCCGGAAACTGTCGTATGACTTGCGAATTCCAAACATGTTGCTCGATGCATATTGCAGAAAAGGTCTGATGGAGAAGGCTGAAGCCTTCATTAACGAGACGATGACCGGTAGAGGCAAGTTTTCTATCAATTCGTGGTGCTATATGGCAAGCGGATATATTCAGAAAGATCAACTACCTCTAGCAGTTGACAAACTGAAAAAAGCAGCCACTTTATGCCCATCAGAACTGAAAAACGTCAAGGAAATTTTGGTAACTTTTTTGGATGGCAAGCAAGATGTAAAAGAAGCTGAGAAAGTCGTTGATTTGTTGAGGGCTAAAGATAAATCCTATTTTTCTCATGATGTATTGATAGTGTGATGATGAATGTGCATAATTTGATAAGTTACTTTAATTCTTAAAGAACACTCTGCCCTTTTGTTTAGGTTTTTTTAGCTTTTGAAATTGAAGGATGGATAACTATTGATCCACAAAGGGCGATCTCATTGATAAGGGTTTGGG

mRNA sequence

ACGGGGTTTCGAAATGAAGCTTTTACTTCCACGAAAACGAATGCATCTGATTGCATTCCAAAGAGAATTGGTGCATTTTTACTCTACAACTTCGAAGGATTCACTTTACAGAAGGATTTCACCGGTGGGTGACCCTAATGTCTCTGTAATTCCTGTTCTTGATCAGTGGGTGCTACAAGGCTGGCCTGTTCAGAGAGAAGAACTTCAAAAGATCGTCAAGGAATTGAGGATTTACAAGCGCTTCAATCATGCTCTTGAGGTATCAAAATGGATGAGTGATAAAAGATACCTTCCACTATCGGCTGTTGATATTTCAGAACGGATGAATTTGATCTTAAGAGTTCATGGGTTGGAACAAGTAGAGGATTATTTCAACAGCATTCCAAGTCAATTGAAAAAGTTTCAGGTTCATGTAGCTCTTCTGAATTGCTATGCTCATGAAAAGTGTGTGGATAAAGCCAATATCGTCCTGCAAAAGATGAAGGAAATGGGTTTTGATAGAACACCCCTACCATACAATATCATGATGAATATTTATTATAAAATTGGAGAATATGAGAAATTAGATCCTTTGATGCAAGAAATGGAAGAAAAGGATGTTTCTTATGATCGATTCACATATAGCATCCGGCTGAGTGCATATTCTGCTGCTTCTGATATCGAGGGAGTCGATAAGATTTTGGAACAAATGGAATCAGATCCCAAAATTGTTCTAGATTGGAACTGTTGTGTCATTGCTGCAAATGGTTACCTTAAAGTTGGCTTAGTAGACAAATCCCTTTCTATGCTGAAGAAATCAGAAGGTCTCCTAGCAACTGCCAGAAGGAGAGGTTCTCCTTTTGACATCCTTCTCAAACTATATGCTACAAGTGGAAAGAAAGACGAGTTACACCGTGTCTGGAATCTCTACAAGAAGGAAAAAGTCTACAACAAAGGTTATATGAGTATGATGAGATCACTTTTGATATTGGACGATATCAAAGCTGCCGAGCATATATTCAAGGAGTGGGAGACCCGGAAACTGTCGTATGACTTGCGAATTCCAAACATGTTGCTCGATGCATATTGCAGAAAAGGTCTGATGGAGAAGGCTGAAGCCTTCATTAACGAGACGATGACCGGTAGAGGCAAGTTTTCTATCAATTCGTGGTGCTATATGGCAAGCGGATATATTCAGAAAGATCAACTACCTCTAGCAGTTGACAAACTGAAAAAAGCAGCCACTTTATGCCCATCAGAACTGAAAAACGTCAAGGAAATTTTGGTAACTTTTTTGGATGGCAAGCAAGATGTAAAAGAAGCTGAGAAAGTCGTTGATTTGTTGAGGGCTAAAGATAAATCCTATTTTTCTCATGATGTATTGATAGTGTGATGATGAATGTGCATAATTTGATAAGTTACTTTAATTCTTAAAGAACACTCTGCCCTTTTGTTTAGGTTTTTTTAGCTTTTGAAATTGAAGGATGGATAACTATTGATCCACAAAGGGCGATCTCATTGATAAGGGTTTGGG

Coding sequence (CDS)

ATGAAGCTTTTACTTCCACGAAAACGAATGCATCTGATTGCATTCCAAAGAGAATTGGTGCATTTTTACTCTACAACTTCGAAGGATTCACTTTACAGAAGGATTTCACCGGTGGGTGACCCTAATGTCTCTGTAATTCCTGTTCTTGATCAGTGGGTGCTACAAGGCTGGCCTGTTCAGAGAGAAGAACTTCAAAAGATCGTCAAGGAATTGAGGATTTACAAGCGCTTCAATCATGCTCTTGAGGTATCAAAATGGATGAGTGATAAAAGATACCTTCCACTATCGGCTGTTGATATTTCAGAACGGATGAATTTGATCTTAAGAGTTCATGGGTTGGAACAAGTAGAGGATTATTTCAACAGCATTCCAAGTCAATTGAAAAAGTTTCAGGTTCATGTAGCTCTTCTGAATTGCTATGCTCATGAAAAGTGTGTGGATAAAGCCAATATCGTCCTGCAAAAGATGAAGGAAATGGGTTTTGATAGAACACCCCTACCATACAATATCATGATGAATATTTATTATAAAATTGGAGAATATGAGAAATTAGATCCTTTGATGCAAGAAATGGAAGAAAAGGATGTTTCTTATGATCGATTCACATATAGCATCCGGCTGAGTGCATATTCTGCTGCTTCTGATATCGAGGGAGTCGATAAGATTTTGGAACAAATGGAATCAGATCCCAAAATTGTTCTAGATTGGAACTGTTGTGTCATTGCTGCAAATGGTTACCTTAAAGTTGGCTTAGTAGACAAATCCCTTTCTATGCTGAAGAAATCAGAAGGTCTCCTAGCAACTGCCAGAAGGAGAGGTTCTCCTTTTGACATCCTTCTCAAACTATATGCTACAAGTGGAAAGAAAGACGAGTTACACCGTGTCTGGAATCTCTACAAGAAGGAAAAAGTCTACAACAAAGGTTATATGAGTATGATGAGATCACTTTTGATATTGGACGATATCAAAGCTGCCGAGCATATATTCAAGGAGTGGGAGACCCGGAAACTGTCGTATGACTTGCGAATTCCAAACATGTTGCTCGATGCATATTGCAGAAAAGGTCTGATGGAGAAGGCTGAAGCCTTCATTAACGAGACGATGACCGGTAGAGGCAAGTTTTCTATCAATTCGTGGTGCTATATGGCAAGCGGATATATTCAGAAAGATCAACTACCTCTAGCAGTTGACAAACTGAAAAAAGCAGCCACTTTATGCCCATCAGAACTGAAAAACGTCAAGGAAATTTTGGTAACTTTTTTGGATGGCAAGCAAGATGTAAAAGAAGCTGAGAAAGTCGTTGATTTGTTGAGGGCTAAAGATAAATCCTATTTTTCTCATGATGTATTGATAGTGTGA

Protein sequence

MKLLLPRKRMHLIAFQRELVHFYSTTSKDSLYRRISPVGDPNVSVIPVLDQWVLQGWPVQREELQKIVKELRIYKRFNHALEVSKWMSDKRYLPLSAVDISERMNLILRVHGLEQVEDYFNSIPSQLKKFQVHVALLNCYAHEKCVDKANIVLQKMKEMGFDRTPLPYNIMMNIYYKIGEYEKLDPLMQEMEEKDVSYDRFTYSIRLSAYSAASDIEGVDKILEQMESDPKIVLDWNCCVIAANGYLKVGLVDKSLSMLKKSEGLLATARRRGSPFDILLKLYATSGKKDELHRVWNLYKKEKVYNKGYMSMMRSLLILDDIKAAEHIFKEWETRKLSYDLRIPNMLLDAYCRKGLMEKAEAFINETMTGRGKFSINSWCYMASGYIQKDQLPLAVDKLKKAATLCPSELKNVKEILVTFLDGKQDVKEAEKVVDLLRAKDKSYFSHDVLIV

Homology

[Close]

BLAST of Sed0017099 vs. NCBI nr
Match: XP_022140106.1 (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Momordica charantia])

HSP 1 Score: 739.6 bits (1908), Expect = 1.6e-209
Identity = 362/451 (80.27%), Postives = 408/451 (90.47%), Query Frame = 0


Query: 1   MKLLLPRKRMHLIAFQRELVHFYSTTSKDSLYRRISPVGDPNVSVIPVLDQWVLQGWPVQ 60
           MKLL+P K++H +AF+R L HFYS  ++DSLYRRISPVGDPNVSVIPVLDQWV +G PVQ
Sbjct: 1   MKLLVPGKQVHPVAFRRILGHFYSMIARDSLYRRISPVGDPNVSVIPVLDQWVREGRPVQ 60

Query: 61  REELQKIVKELRIYKRFNHALEVSKWMSDKRYLPLSAVDISERMNLILRVHGLEQVEDYF 120
           REELQKI+KELRIYKR  HALE+SKWM DKRYLPLS+VDI+ RMNLILRVHGLEQVEDYF
Sbjct: 61  REELQKIIKELRIYKRSKHALEISKWMGDKRYLPLSSVDIATRMNLILRVHGLEQVEDYF 120

Query: 121 NSIPSQLKKFQVHVALLNCYAHEKCVDKANIVLQKMKEMGFDRTPLPYNIMMNIYYKIGE 180
           NSIPSQLKKFQVHVALLNCYAHEKCVDKAN +LQK+KEMGFD  PLPYNIMMN+YY+IGE
Sbjct: 121 NSIPSQLKKFQVHVALLNCYAHEKCVDKANAILQKIKEMGFDGAPLPYNIMMNLYYQIGE 180

Query: 181 YEKLDPLMQEMEEKDVSYDRFTYSIRLSAYSAASDIEGVDKILEQMESDPKIVLDWNCCV 240
           +E+LDPL+QEMEEK VSYDR+TYSIRLSAY+ ASDI+GVD I+E+ME DP+IV DW+C V
Sbjct: 181 FERLDPLLQEMEEKGVSYDRYTYSIRLSAYAVASDIKGVDNIVERMELDPRIVPDWSCYV 240

Query: 241 IAANGYLKVGLVDKSLSMLKKSEGLLATARRRGSPFDILLKLYATSGKKDELHRVWNLYK 300
           IAANGYLKVGLVDKSLSML+KSE LLATA+RRGS FDILLKLYA SGKKDELHR+W LYK
Sbjct: 241 IAANGYLKVGLVDKSLSMLRKSEALLATAKRRGSAFDILLKLYAESGKKDELHRIWKLYK 300

Query: 301 KEKVYNKGYMSMMRSLLILDDIKAAEHIFKEWETRKLSYDLRIPNMLLDAYCRKGLMEKA 360
           KEKVYNKGYMSMMRSLLILDDI+AAEHIFK+WET KLS DLRIPNML++AYCR+GLMEKA
Sbjct: 301 KEKVYNKGYMSMMRSLLILDDIEAAEHIFKDWETWKLSNDLRIPNMLIEAYCRRGLMEKA 360

Query: 361 EAFINETMTGRGKFSINSWCYMASGYIQKDQLPLAVDKLKKAATLCPSELKNVKEILVTF 420
           EA IN+ +TG+ KFS++SWCY+A+ YIQKDQL   V+ LKKAATLCP EL + KEIL TF
Sbjct: 361 EALINKAVTGKSKFSVHSWCYLANAYIQKDQLQHTVEALKKAATLCPPELNHFKEILATF 420

Query: 421 LDGKQDVKEAEKVVDLLRAKDKSYFSHDVLI 452
           L+GKQDVKEAEKVV LLRA+  S F+HDVLI
Sbjct: 421 LEGKQDVKEAEKVVGLLRAEANSLFAHDVLI 451

[Close]

BLAST of Sed0017099 vs. NCBI nr
Match: KAA0056984.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 674.9 bits (1740), Expect = 5.0e-190
Identity = 325/453 (71.74%), Postives = 394/453 (86.98%), Query Frame = 0


Query: 1   MKLLLPRKRMHLIAFQRELVHFYSTTSKDSLYRRISPVGDPNVSVIPVLDQWVLQGWPVQ 60
           MKLL   K  +LIA +R LV+FYST  KD+LYRRISPVGDPN+SVIPVLDQWVL+G  VQ
Sbjct: 507 MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ 566

Query: 61  REELQKIVKELRIYKRFNHALEVSKWMSDKRYLPLSAVDISERMNLILRVHGLEQVEDYF 120
           +EELQKI+KELR+YKRF HALE+SKWMSDKRYLPLS  D++ RMNLILRVHGLEQVEDYF
Sbjct: 567 KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF 626

Query: 121 NSIPSQLKKFQVHVALLNCYAHEKCVDKANIVLQKMKEMGFDRTPLPYNIMMNIYYKIGE 180
           N++PSQLK++ VH+ALLNCYAHEKCVDKAN  LQK+KEMG+ ++ LPYNIMMN+Y++IGE
Sbjct: 627 NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE 686

Query: 181 YEKLDPLMQEMEEKDVSYDRFTYSIRLSAYSAASDIEGVDKILEQMESDPKIVLDWNCCV 240
           +E+LD L++EM+EK V YDRFTYSIRLSAY+AASD  G++K++EQMES+  IVLDWNC V
Sbjct: 687 FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV 746

Query: 241 IAANGYLKVGLVDKSLSMLKKSEGLLATARRRGSPFDILLKLYATSGKKDELHRVWNLYK 300
           IAAN Y KVGL+DKS+SMLKKSEG LAT +++G  F++ LKLYA +GKKDE+HR+WNLYK
Sbjct: 747 IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK 806

Query: 301 KEKVYNKGYMSMMRSLLILDDIKAAEHIFKEWETRKLSYDLRIPNMLLDAYCRKGLMEKA 360
           KEK++NKG++SM+RSLLILDDI+ AE I+KEWET+KLSYD+RIPN+L+DAYCR GL+EKA
Sbjct: 807 KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA 866

Query: 361 EAFINETMTGRGKFSINSWCYMASGYIQKDQLPLAVDKLKKAATLCPSELKNVKEILVTF 420
           E  +NE +  RGKFS+ SWCY+ASGY+QKDQLP AV+ LKKAA+LCPSEL  VKEIL  F
Sbjct: 867 EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF 926

Query: 421 LDGKQDVKEAEKVVDLLRAKD--KSYFSHDVLI 452
            DGKQDV+EAEKVV+LLR KD      +HD+L+
Sbjct: 927 SDGKQDVEEAEKVVNLLREKDNLNPARAHDILV 959

[Close]

BLAST of Sed0017099 vs. NCBI nr
Match: XP_008442434.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis melo] >TYK26412.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 674.9 bits (1740), Expect = 5.0e-190
Identity = 325/453 (71.74%), Postives = 394/453 (86.98%), Query Frame = 0


Query: 1   MKLLLPRKRMHLIAFQRELVHFYSTTSKDSLYRRISPVGDPNVSVIPVLDQWVLQGWPVQ 60
           MKLL   K  +LIA +R LV+FYST  KD+LYRRISPVGDPN+SVIPVLDQWVL+G  VQ
Sbjct: 1   MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ 60

Query: 61  REELQKIVKELRIYKRFNHALEVSKWMSDKRYLPLSAVDISERMNLILRVHGLEQVEDYF 120
           +EELQKI+KELR+YKRF HALE+SKWMSDKRYLPLS  D++ RMNLILRVHGLEQVEDYF
Sbjct: 61  KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF 120

Query: 121 NSIPSQLKKFQVHVALLNCYAHEKCVDKANIVLQKMKEMGFDRTPLPYNIMMNIYYKIGE 180
           N++PSQLK++ VH+ALLNCYAHEKCVDKAN  LQK+KEMG+ ++ LPYNIMMN+Y++IGE
Sbjct: 121 NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE 180

Query: 181 YEKLDPLMQEMEEKDVSYDRFTYSIRLSAYSAASDIEGVDKILEQMESDPKIVLDWNCCV 240
           +E+LD L++EM+EK V YDRFTYSIRLSAY+AASD  G++K++EQMES+  IVLDWNC V
Sbjct: 181 FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV 240

Query: 241 IAANGYLKVGLVDKSLSMLKKSEGLLATARRRGSPFDILLKLYATSGKKDELHRVWNLYK 300
           IAAN Y KVGL+DKS+SMLKKSEG LAT +++G  F++ LKLYA +GKKDE+HR+WNLYK
Sbjct: 241 IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK 300

Query: 301 KEKVYNKGYMSMMRSLLILDDIKAAEHIFKEWETRKLSYDLRIPNMLLDAYCRKGLMEKA 360
           KEK++NKG++SM+RSLLILDDI+ AE I+KEWET+KLSYD+RIPN+L+DAYCR GL+EKA
Sbjct: 301 KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA 360

Query: 361 EAFINETMTGRGKFSINSWCYMASGYIQKDQLPLAVDKLKKAATLCPSELKNVKEILVTF 420
           E  +NE +  RGKFS+ SWCY+ASGY+QKDQLP AV+ LKKAA+LCPSEL  VKEIL  F
Sbjct: 361 EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF 420

Query: 421 LDGKQDVKEAEKVVDLLRAKD--KSYFSHDVLI 452
            DGKQDV+EAEKVV+LLR KD      +HD+L+
Sbjct: 421 SDGKQDVEEAEKVVNLLREKDNLNPARAHDILV 453

[Close]

BLAST of Sed0017099 vs. NCBI nr
Match: XP_011653157.2 (pentatricopeptide repeat-containing protein At2g20710, mitochondrial isoform X1 [Cucumis sativus] >KAE8652711.1 hypothetical protein Csa_013210 [Cucumis sativus])

HSP 1 Score: 671.4 bits (1731), Expect = 5.5e-189
Identity = 320/453 (70.64%), Postives = 391/453 (86.31%), Query Frame = 0


Query: 1   MKLLLPRKRMHLIAFQRELVHFYSTTSKDSLYRRISPVGDPNVSVIPVLDQWVLQGWPVQ 60
           MKLL   K ++LIAF+ E V+FYST  KD+LYRRISPVGDPN+SV P+LDQWVL+G  VQ
Sbjct: 1   MKLLQSLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQ 60

Query: 61  REELQKIVKELRIYKRFNHALEVSKWMSDKRYLPLSAVDISERMNLILRVHGLEQVEDYF 120
           ++EL+ I+KELR+YKRF HALE+SKWMSDKRY PLS  DI+ RMNLILRVHGLEQVEDYF
Sbjct: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYF 120

Query: 121 NSIPSQLKKFQVHVALLNCYAHEKCVDKANIVLQKMKEMGFDRTPLPYNIMMNIYYKIGE 180
           +++PSQLK++QVH+ALLNCYAHEKCVDKAN  +QK+KEMGF  +PLPYNIMMN+Y++IGE
Sbjct: 121 DNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMNLYHQIGE 180

Query: 181 YEKLDPLMQEMEEKDVSYDRFTYSIRLSAYSAASDIEGVDKILEQMESDPKIVLDWNCCV 240
           +E+LD L++EM+E+ V YDRFTYSIR+SAY+AASD  G++KI+EQMES+P IVLDWNC V
Sbjct: 181 FERLDSLLKEMKERGVYYDRFTYSIRISAYAAASDFRGIEKIMEQMESNPSIVLDWNCYV 240

Query: 241 IAANGYLKVGLVDKSLSMLKKSEGLLATARRRGSPFDILLKLYATSGKKDELHRVWNLYK 300
           IAAN Y KVGL+DKS+SMLKKSEGLLA  +++G  F++ LKLYA +GKKDE+HR+WNLYK
Sbjct: 241 IAANAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYK 300

Query: 301 KEKVYNKGYMSMMRSLLILDDIKAAEHIFKEWETRKLSYDLRIPNMLLDAYCRKGLMEKA 360
           KEK++NKG++SM+ SLLILDDIK AE I+KEWETRKLSYDLRIPN+L+DAYCR GLMEKA
Sbjct: 301 KEKIFNKGFISMITSLLILDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKA 360

Query: 361 EAFINETMTGRGKFSINSWCYMASGYIQKDQLPLAVDKLKKAATLCPSELKNVKEILVTF 420
           E  +NE +  R KFS+ SWCY+ASGY+QKDQLP AV+ LK AA++CPS L  VKEIL  F
Sbjct: 361 EVLLNEMVIVRRKFSVESWCYLASGYLQKDQLPQAVETLKLAASVCPSRLNYVKEILAAF 420

Query: 421 LDGKQDVKEAEKVVDLLRAKDKSY--FSHDVLI 452
           LDGKQDV+E EKVV+LLR KD S+   +HD ++
Sbjct: 421 LDGKQDVEETEKVVNLLREKDDSHPARAHDYIV 453

[Close]

BLAST of Sed0017099 vs. NCBI nr
Match: XP_008442448.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis melo] >TYK26411.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 629.0 bits (1621), Expect = 3.1e-176
Identity = 313/460 (68.04%), Postives = 380/460 (82.61%), Query Frame = 0


Query: 1   MKLLLPRKRMHLIAFQRELVHFYSTTSKDSLYRRISPVGDPNVSVIPVLDQWVLQGWPVQ 60
           MKLL   K ++LIAF+RELV+FYST   D LYRR+SPVGDPN+S++P+LDQWV +G PVQ
Sbjct: 1   MKLLQSVKSINLIAFRRELVNFYSTFVNDDLYRRLSPVGDPNISIVPILDQWVSEGRPVQ 60

Query: 61  REELQKIVKELRIYKRFNHALEVSKWMSDKRYLPLSAVDISERMNLILRVHGLEQVEDYF 120
             EL+ I+KELR+YKR+ HALE+SKWMSDK  LPLS  DI+ RMNLILRVHGLEQVEDYF
Sbjct: 61  IVELRLIIKELRVYKRYKHALEMSKWMSDKVCLPLSTADIATRMNLILRVHGLEQVEDYF 120

Query: 121 NSIPSQLKKFQVHVALLNCYAHEKCVDKANIVLQKMKEMGFDRTPLPYNIMMNIYYKIGE 180
           N++PS+LK++QVH+ALLNCYAHEKCVDKAN +LQK+KE+GF  TP PYNIMMN+Y++IGE
Sbjct: 121 NNMPSKLKRYQVHIALLNCYAHEKCVDKANALLQKIKELGFATTPHPYNIMMNLYHQIGE 180

Query: 181 YEKLDPLMQEMEEKDVSYDRFTYSIRLSAYSAASDIEGVDKILEQMESDPKIVLDWNCCV 240
           +E+LD LM+EM+E+ + YDRFTYSIRLSAY+ ASD  G++KI EQMES+  IVLDWNC V
Sbjct: 181 FERLDSLMKEMKERGLYYDRFTYSIRLSAYATASDCAGIEKITEQMESNTSIVLDWNCYV 240

Query: 241 IAANGYLKVGLVDKSLSMLKKSEGLLA-TARRRGSPFDILLKLYATSGKKDELHRVWNLY 300
           +AA+ Y KVGL+DKS+SMLKKSE LLA TA  +   F+I L LYA +GKKDE +R+WNLY
Sbjct: 241 VAADAYYKVGLIDKSISMLKKSEELLAKTAENKCHAFNIYLTLYAKNGKKDETYRIWNLY 300

Query: 301 KKEKVYNKGYMSMMRSLLILDDIKAAEHIFKE-----WETRKLSYDLRIPNMLLDAYCRK 360
           KKEKV+NKG++SM+ SLLILDDIK A  I +E     WET+KLSYDLRIPN+L+DAYCR 
Sbjct: 301 KKEKVFNKGFISMITSLLILDDIKGARRICEEWETQVWETQKLSYDLRIPNLLVDAYCRA 360

Query: 361 GLMEKAEAFINETMTGRGKFSINSWCYMASGYIQKDQLPLAVDKLKKAATLCPSELKNVK 420
           GLME+AE  + E MT R KFS+ SWCY+ASGY+QKDQLP AV+ LK AA+LCPS+L  VK
Sbjct: 361 GLMEEAEVLVYEMMTVRRKFSVKSWCYIASGYLQKDQLPEAVETLKIAASLCPSKLDYVK 420

Query: 421 EILVTFLDGKQDVKEAEKVVDLLRAKDKSY--FSHDVLIV 453
           EIL  FLDGKQDV+E EKVV+LLR KD S+    HD  I+
Sbjct: 421 EILAAFLDGKQDVEEVEKVVNLLREKDNSHPARGHDYAIM 460

[Close]

BLAST of Sed0017099 vs. ExPASy Swiss-Prot
Match: Q9SKU6 (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 6.5e-92
Identity = 179/460 (38.91%), Postives = 295/460 (64.13%), Query Frame = 0


Query: 1   MKLLLPRKRMHLIAFQRELVHFYSTTSK-----DSLYRRISPVGDPNVSVIPVLDQWVLQ 60
           ++L+LP+   + I  +  L H   TT       D+L RR++  GDP+ S+I VLD W+ Q
Sbjct: 7   LRLVLPKP--NYILRRSFLFHSGKTTPSPLDPYDTLQRRVARSGDPSASIIKVLDGWLDQ 66

Query: 61  GWPVQREELQKIVKELRIYKRFNHALEVSKWMSDKRYLPLSAVDISERMNLILRVHGLEQ 120
           G  V+  EL  I+K LR + RF+HAL++S WMS+ R   +S  D++ R++LI +V GL +
Sbjct: 67  GNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEHRVHEISEGDVAIRLDLIAKVGGLGE 126

Query: 121 VEDYFNSIPSQLKKFQVHVALLNCYAHEKCVDKANIVLQKMKEMGFDRTPLPYNIMMNIY 180
            E +F +IP + + + ++ ALLNCYA +K + KA  V Q+MKE+GF +  LPYN+M+N+Y
Sbjct: 127 AEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLY 186

Query: 181 YKIGEYEKLDPLMQEMEEKDVSYDRFTYSIRLSAYSAASDIEGVDKILEQMESDPKIVLD 240
            + G+Y  ++ L++EME++ V  D FT + RL AYS  SD+EG++K L + E+D  + LD
Sbjct: 187 VRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLD 246

Query: 241 WNCCVIAANGYLKVGLVDKSLSMLKKSEGLLATARRRGSPFDILLKLYATSGKKDELHRV 300
           W      ANGY+K GL +K+L ML+KSE ++  A++R   +++L+  Y  +GKK+E++R+
Sbjct: 247 WRTYADTANGYIKAGLTEKALEMLRKSEQMV-NAQKRKHAYEVLMSFYGAAGKKEEVYRL 306

Query: 301 WNLYKK-EKVYNKGYMSMMRSLLILDDIKAAEHIFKEWETRKLSYDLRIPNMLLDAYCRK 360
           W+LYK+ +  YN GY+S++ +LL +DDI+  E I +EWE     +D+RIP++L+  YC+K
Sbjct: 307 WSLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKK 366

Query: 361 GLMEKAEAFINETMTGRGKFSINSWCYMASGYIQKDQLPLAVDKLKKAATLCPSELKNVK 420
           G+MEKAE  +N  +        ++W  +A GY    ++  AV+K K+A  +     +  +
Sbjct: 367 GMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKAVEKWKRAIEVSKPGWRPHQ 426

Query: 421 EIL---VTFLDGKQDVKEAEKVVDLLRAKDKSYFSHDVLI 452
            +L   V +L+G++D++   K++ LL   ++ + S+D L+
Sbjct: 427 VVLMSCVDYLEGQRDMEGLRKILRLL--SERGHISYDQLL 461

[Close]

BLAST of Sed0017099 vs. ExPASy Swiss-Prot
Match: Q84JR3 (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.3e-68
Identity = 152/426 (35.68%), Postives = 247/426 (57.98%), Query Frame = 0


Query: 21  HFYSTTSKDSLYRRISPVGDPNVSVIPVLDQWVLQGWPVQREELQKIVKELRIYKRFNHA 80
           ++ +   K +LY +ISP+GDP  SV P L  WV  G  V   EL +IV +LR  KRF HA
Sbjct: 17  YYTNRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHA 76

Query: 81  LEVSKWMSDKRYLPLSAVDISERMNLILRVHGLEQVEDYFNSIPSQLKKFQVHVALLNCY 140
           LEVSKWM++      S  + +  ++LI RV+G    E+YF ++  Q K  + + ALLNCY
Sbjct: 77  LEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCY 136

Query: 141 AHEKCVDKANIVLQKMKEMGFDRTPLPYNIMMNIYYKIGEYEKLDPLMQEMEEKDVSYDR 200
             ++ V+K+ +  +KMKEMGF  + L YN +M +Y  IG++EK+  +++EM+E++V+ D 
Sbjct: 137 VRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDN 196

Query: 201 FTYSIRLSAYSAASDIEGVDKILEQMESDPKIVLDWNCCVIAANGYLKVGLVDKSLSMLK 260
           ++Y I ++A+ A  D+E +   L  ME    I +DWN   +AA  Y+  G  D+++ +LK
Sbjct: 197 YSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLK 256

Query: 261 KSEGLLATARRRGSPFDILLKLYATSGKKDELHRVWNLYKK--EKVYNKGYMSMMRSLLI 320
            SE  L   ++ G  ++ L+ LYA  GKK E+ R+W+L K   ++  N+ Y+++++SL+ 
Sbjct: 257 MSENRL--EKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVK 316

Query: 321 LDDIKAAEHIFKEWETRKLSYDLRIPNMLLDAYCRKGLMEKAEAFINETMTGRGKFSI-N 380
           +D +  AE +  EW++    YD R+PN ++  Y  K + EKAEA + E +  RGK +   
Sbjct: 317 IDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAML-EDLARRGKATTPE 376

Query: 381 SWCYMASGYIQKDQLPLAVDKLKKAATLCPSELK-----NVKEILVTFLDGKQDVKEAEK 439
           SW  +A+ Y +K  L  A   +K A  +     K      +   +++++  +  +KE E 
Sbjct: 377 SWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVES 436

[Close]

BLAST of Sed0017099 vs. ExPASy Swiss-Prot
Match: Q8LPS6 (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 259.6 bits (662), Expect = 6.5e-68
Identity = 149/429 (34.73%), Postives = 251/429 (58.51%), Query Frame = 0


Query: 29  DSLYRRISPVGDPNVSVIPVLDQWVLQGWPVQREELQKIVKELRIYKRFNHALEVSKWMS 88
           +++Y++IS +  P +    VL+QW   G  + + EL ++VKELR YKR N ALEV  WM+
Sbjct: 67  NAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMN 126

Query: 89  DK-RYLPLSAVDISERMNLILRVHGLEQVEDYFNSIPSQLKKFQVHVALLNCYAHEKCVD 148
           ++     LSA D + +++LI +V G+   E++F  +P   K  +V+ +LLN Y   K  +
Sbjct: 127 NRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSRE 186

Query: 149 KANIVLQKMKEMGFDRTPLPYNIMMNIYYKIGEYEKLDPLMQEMEEKDVSYDRFTYSIRL 208
           KA  +L  M++ G+   PLP+N+MM +Y  + EY+K+D ++ EM++KD+  D ++Y+I L
Sbjct: 187 KAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWL 246

Query: 209 SAYSAASDIEGVDKILEQMESDPKIVLDWNCCVIAANGYLKVGLVDKSLSMLKKSEGLLA 268
           S+  +   +E ++ + +QM+SD  I  +W      A  Y+K+G  +K+   L+K E  + 
Sbjct: 247 SSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARI- 306

Query: 269 TARRRGSPFDILLKLYATSGKKDELHRVWNLYKK--EKVYNKGYMSMMRSLLILDDIKAA 328
           T R R  P+  LL LY + G K EL+RVW++YK     + N GY +++ SL+ + DI+ A
Sbjct: 307 TGRNR-IPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGA 366

Query: 329 EHIFKEWETRKLSYDLRIPNMLLDAYCRKGLMEKAEAFINETMTGRGKFSINSWCYMASG 388
           E +++EW   K SYD RIPN+L++AY +   +E AE   +  +   GK S ++W  +A G
Sbjct: 367 EKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVG 426

Query: 389 YIQKDQLPLAVDKLKKAATLCPSELKNVKEILVT----FLDGKQDVKEAEKVVDLLR--- 447
           + +K  +  A+  L+ A +   S     K ++++      + + DV   E V++LLR   
Sbjct: 427 HTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSG 486

[Close]

BLAST of Sed0017099 vs. ExPASy Swiss-Prot
Match: Q9C7F1 (Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis thaliana OX=3702 GN=At1g28020 PE=3 SV=2)

HSP 1 Score: 228.0 bits (580), Expect = 2.1e-58
Identity = 129/335 (38.51%), Postives = 196/335 (58.51%), Query Frame = 0


Query: 34  RISPVGDPNVSVIPVLDQWVLQGWPVQREELQKIVKELRIYKRFNHALEVSKWMSDKRYL 93
           RI+     N  +IPVL+QW  QG  V    ++ I+K+LR   +   AL+VS+WMS ++  
Sbjct: 41  RITDALHRNAQIIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKIC 100

Query: 94  PLSAVDISERMNLILRVHGLEQVEDYFNSIPSQLKKFQVHVALLNCYAH-EKCVDKANIV 153
            L   D + R++LI  V GLE+ E +F SIP   +   V+ +LLN YA  +K + KA   
Sbjct: 101 NLIPEDFAARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEAT 160

Query: 154 LQKMKEMGFDRTPLPYNIMMNIYYKIGEYEKLDPLMQEMEEKDVSYDRFTYSIRLSAYSA 213
            QKM+++G    P+PYN MM++Y  +   EK++ L+ EM++ DV  D  T +  L  YSA
Sbjct: 161 FQKMRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSA 220

Query: 214 ASDIEGVDKILEQMESDPKIVLDWNCCVIAANGYLKVGLVDKSLSMLKKSEGLLATARRR 273
             D+  ++K L + E    I L+W+  +  A  YL+     K++ ML+ +E L+   +  
Sbjct: 221 VCDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLV-DQKSL 280

Query: 274 GSPFDILLKLYATSGKKDELHRVWNLYKKE--KVYNKGYMSMMRSLLILDDIKAAEHIFK 333
            S +D L+KLY  +G ++E+ RVW LYK +  +  N GY +++RSLL +DDI  AE I+K
Sbjct: 281 KSAYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYK 340

Query: 334 EWETRKLSYDLRIPNMLLDAYCRKGLMEKAEAFIN 366
            WE+  L +D RIP ML   Y  +G+ EKAE  +N
Sbjct: 341 VWESLPLEFDHRIPTMLASGYRDRGMTEKAEKLMN 374

[Close]

BLAST of Sed0017099 vs. ExPASy Swiss-Prot
Match: Q93WC5 (Pentatricopeptide repeat-containing protein At4g01990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g01990 PE=2 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.8e-52
Identity = 125/417 (29.98%), Postives = 225/417 (53.96%), Query Frame = 0


Query: 30  SLYRRISPVGDPNVSVI-PVLDQWVLQGWPVQREELQKIVKELRIYKRFNHALEVSKWMS 89
           S+Y+++S +G      +   L+Q+V++G PV++ +L +  K+LR +++   ALE+ +WM 
Sbjct: 40  SIYKKLSSLGTRGGGKMEETLNQFVMEGVPVKKHDLIRYAKDLRKFRQPQRALEIFEWM- 99

Query: 90  DKRYLPLSAVDISERMNLILRVHGLEQVEDYFNSIPSQLKKFQVHVALLNCYAHEKCVDK 149
           +++ +  +  D + R+NLI +  GLE  E YFNS+   +K    + +LLNCY  EK   K
Sbjct: 100 ERKEIAFTGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVK 159

Query: 150 ANIVLQKMKEMGFDRTPLPYNIMMNIYYKIGEYEKLDPLMQEMEEKDVSYDRFTYSIRLS 209
           A    + M ++      LP+N +M +Y  +G+ EK+  L+  M+EK ++    TYS+ + 
Sbjct: 160 AKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQ 219

Query: 210 AYSAASDIEGVDKILEQMESDPKIVLDWNCCVIAANGYLKVGLVDKSLSMLKKSEGLLAT 269
           +  +  D++GV+K+L++M+++ + +  WN     A  Y+KVGL  K+   LK  E  +  
Sbjct: 220 SCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEALKSLENNMNP 279

Query: 270 ARRRGSPFDILLKLYATSGKKDELHRVWNLYKKE--KVYNKGYMSMMRSLLILDDIKAAE 329
             R    +  L+ LY       E++RVW+L KK    V N  Y++M+R+L  LDDI   +
Sbjct: 280 DVR--DCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVK 339

Query: 330 HIFKEWETRKLSYDLRIPNMLLDAYCRKGLMEKAEAFINETMTG-RGKFSINSWCYMASG 389
            +F EWE+   +YD+R+ N+ + +Y ++ + E+AEA  N  M   +G+FS      M   
Sbjct: 340 KVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQFSKARQLLMMH- 399

Query: 390 YIQKDQLPLAVDKLKKAATLCPSELKNVKEILVTFLDGKQDVKEAEKVVDLLRAKDK 443
            ++ DQ  LA+   + A            E++ +F    ++ K+ +   +  +   K
Sbjct: 400 LLKNDQADLALKHFEAAVLDQDKNWTWSSELISSFFLHFEEAKDVDGAEEFCKTLTK 452

[Close]

BLAST of Sed0017099 vs. ExPASy TrEMBL
Match: A0A6J1CET9 (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111010842 PE=4 SV=1)

HSP 1 Score: 739.6 bits (1908), Expect = 7.9e-210
Identity = 362/451 (80.27%), Postives = 408/451 (90.47%), Query Frame = 0


Query: 1   MKLLLPRKRMHLIAFQRELVHFYSTTSKDSLYRRISPVGDPNVSVIPVLDQWVLQGWPVQ 60
           MKLL+P K++H +AF+R L HFYS  ++DSLYRRISPVGDPNVSVIPVLDQWV +G PVQ
Sbjct: 1   MKLLVPGKQVHPVAFRRILGHFYSMIARDSLYRRISPVGDPNVSVIPVLDQWVREGRPVQ 60

Query: 61  REELQKIVKELRIYKRFNHALEVSKWMSDKRYLPLSAVDISERMNLILRVHGLEQVEDYF 120
           REELQKI+KELRIYKR  HALE+SKWM DKRYLPLS+VDI+ RMNLILRVHGLEQVEDYF
Sbjct: 61  REELQKIIKELRIYKRSKHALEISKWMGDKRYLPLSSVDIATRMNLILRVHGLEQVEDYF 120

Query: 121 NSIPSQLKKFQVHVALLNCYAHEKCVDKANIVLQKMKEMGFDRTPLPYNIMMNIYYKIGE 180
           NSIPSQLKKFQVHVALLNCYAHEKCVDKAN +LQK+KEMGFD  PLPYNIMMN+YY+IGE
Sbjct: 121 NSIPSQLKKFQVHVALLNCYAHEKCVDKANAILQKIKEMGFDGAPLPYNIMMNLYYQIGE 180

Query: 181 YEKLDPLMQEMEEKDVSYDRFTYSIRLSAYSAASDIEGVDKILEQMESDPKIVLDWNCCV 240
           +E+LDPL+QEMEEK VSYDR+TYSIRLSAY+ ASDI+GVD I+E+ME DP+IV DW+C V
Sbjct: 181 FERLDPLLQEMEEKGVSYDRYTYSIRLSAYAVASDIKGVDNIVERMELDPRIVPDWSCYV 240

Query: 241 IAANGYLKVGLVDKSLSMLKKSEGLLATARRRGSPFDILLKLYATSGKKDELHRVWNLYK 300
           IAANGYLKVGLVDKSLSML+KSE LLATA+RRGS FDILLKLYA SGKKDELHR+W LYK
Sbjct: 241 IAANGYLKVGLVDKSLSMLRKSEALLATAKRRGSAFDILLKLYAESGKKDELHRIWKLYK 300

Query: 301 KEKVYNKGYMSMMRSLLILDDIKAAEHIFKEWETRKLSYDLRIPNMLLDAYCRKGLMEKA 360
           KEKVYNKGYMSMMRSLLILDDI+AAEHIFK+WET KLS DLRIPNML++AYCR+GLMEKA
Sbjct: 301 KEKVYNKGYMSMMRSLLILDDIEAAEHIFKDWETWKLSNDLRIPNMLIEAYCRRGLMEKA 360

Query: 361 EAFINETMTGRGKFSINSWCYMASGYIQKDQLPLAVDKLKKAATLCPSELKNVKEILVTF 420
           EA IN+ +TG+ KFS++SWCY+A+ YIQKDQL   V+ LKKAATLCP EL + KEIL TF
Sbjct: 361 EALINKAVTGKSKFSVHSWCYLANAYIQKDQLQHTVEALKKAATLCPPELNHFKEILATF 420

Query: 421 LDGKQDVKEAEKVVDLLRAKDKSYFSHDVLI 452
           L+GKQDVKEAEKVV LLRA+  S F+HDVLI
Sbjct: 421 LEGKQDVKEAEKVVGLLRAEANSLFAHDVLI 451

[Close]

BLAST of Sed0017099 vs. ExPASy TrEMBL
Match: A0A5D3DSH1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00760 PE=4 SV=1)

HSP 1 Score: 674.9 bits (1740), Expect = 2.4e-190
Identity = 325/453 (71.74%), Postives = 394/453 (86.98%), Query Frame = 0


Query: 1   MKLLLPRKRMHLIAFQRELVHFYSTTSKDSLYRRISPVGDPNVSVIPVLDQWVLQGWPVQ 60
           MKLL   K  +LIA +R LV+FYST  KD+LYRRISPVGDPN+SVIPVLDQWVL+G  VQ
Sbjct: 1   MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ 60

Query: 61  REELQKIVKELRIYKRFNHALEVSKWMSDKRYLPLSAVDISERMNLILRVHGLEQVEDYF 120
           +EELQKI+KELR+YKRF HALE+SKWMSDKRYLPLS  D++ RMNLILRVHGLEQVEDYF
Sbjct: 61  KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF 120

Query: 121 NSIPSQLKKFQVHVALLNCYAHEKCVDKANIVLQKMKEMGFDRTPLPYNIMMNIYYKIGE 180
           N++PSQLK++ VH+ALLNCYAHEKCVDKAN  LQK+KEMG+ ++ LPYNIMMN+Y++IGE
Sbjct: 121 NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE 180

Query: 181 YEKLDPLMQEMEEKDVSYDRFTYSIRLSAYSAASDIEGVDKILEQMESDPKIVLDWNCCV 240
           +E+LD L++EM+EK V YDRFTYSIRLSAY+AASD  G++K++EQMES+  IVLDWNC V
Sbjct: 181 FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV 240

Query: 241 IAANGYLKVGLVDKSLSMLKKSEGLLATARRRGSPFDILLKLYATSGKKDELHRVWNLYK 300
           IAAN Y KVGL+DKS+SMLKKSEG LAT +++G  F++ LKLYA +GKKDE+HR+WNLYK
Sbjct: 241 IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK 300

Query: 301 KEKVYNKGYMSMMRSLLILDDIKAAEHIFKEWETRKLSYDLRIPNMLLDAYCRKGLMEKA 360
           KEK++NKG++SM+RSLLILDDI+ AE I+KEWET+KLSYD+RIPN+L+DAYCR GL+EKA
Sbjct: 301 KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA 360

Query: 361 EAFINETMTGRGKFSINSWCYMASGYIQKDQLPLAVDKLKKAATLCPSELKNVKEILVTF 420
           E  +NE +  RGKFS+ SWCY+ASGY+QKDQLP AV+ LKKAA+LCPSEL  VKEIL  F
Sbjct: 361 EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF 420

Query: 421 LDGKQDVKEAEKVVDLLRAKD--KSYFSHDVLI 452
            DGKQDV+EAEKVV+LLR KD      +HD+L+
Sbjct: 421 SDGKQDVEEAEKVVNLLREKDNLNPARAHDILV 453

[Close]

BLAST of Sed0017099 vs. ExPASy TrEMBL
Match: A0A5A7UP59 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G001650 PE=4 SV=1)

HSP 1 Score: 674.9 bits (1740), Expect = 2.4e-190
Identity = 325/453 (71.74%), Postives = 394/453 (86.98%), Query Frame = 0


Query: 1   MKLLLPRKRMHLIAFQRELVHFYSTTSKDSLYRRISPVGDPNVSVIPVLDQWVLQGWPVQ 60
           MKLL   K  +LIA +R LV+FYST  KD+LYRRISPVGDPN+SVIPVLDQWVL+G  VQ
Sbjct: 507 MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ 566

Query: 61  REELQKIVKELRIYKRFNHALEVSKWMSDKRYLPLSAVDISERMNLILRVHGLEQVEDYF 120
           +EELQKI+KELR+YKRF HALE+SKWMSDKRYLPLS  D++ RMNLILRVHGLEQVEDYF
Sbjct: 567 KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF 626

Query: 121 NSIPSQLKKFQVHVALLNCYAHEKCVDKANIVLQKMKEMGFDRTPLPYNIMMNIYYKIGE 180
           N++PSQLK++ VH+ALLNCYAHEKCVDKAN  LQK+KEMG+ ++ LPYNIMMN+Y++IGE
Sbjct: 627 NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE 686

Query: 181 YEKLDPLMQEMEEKDVSYDRFTYSIRLSAYSAASDIEGVDKILEQMESDPKIVLDWNCCV 240
           +E+LD L++EM+EK V YDRFTYSIRLSAY+AASD  G++K++EQMES+  IVLDWNC V
Sbjct: 687 FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV 746

Query: 241 IAANGYLKVGLVDKSLSMLKKSEGLLATARRRGSPFDILLKLYATSGKKDELHRVWNLYK 300
           IAAN Y KVGL+DKS+SMLKKSEG LAT +++G  F++ LKLYA +GKKDE+HR+WNLYK
Sbjct: 747 IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK 806

Query: 301 KEKVYNKGYMSMMRSLLILDDIKAAEHIFKEWETRKLSYDLRIPNMLLDAYCRKGLMEKA 360
           KEK++NKG++SM+RSLLILDDI+ AE I+KEWET+KLSYD+RIPN+L+DAYCR GL+EKA
Sbjct: 807 KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA 866

Query: 361 EAFINETMTGRGKFSINSWCYMASGYIQKDQLPLAVDKLKKAATLCPSELKNVKEILVTF 420
           E  +NE +  RGKFS+ SWCY+ASGY+QKDQLP AV+ LKKAA+LCPSEL  VKEIL  F
Sbjct: 867 EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF 926

Query: 421 LDGKQDVKEAEKVVDLLRAKD--KSYFSHDVLI 452
            DGKQDV+EAEKVV+LLR KD      +HD+L+
Sbjct: 927 SDGKQDVEEAEKVVNLLREKDNLNPARAHDILV 959

[Close]

BLAST of Sed0017099 vs. ExPASy TrEMBL
Match: A0A1S3B572 (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103486303 PE=4 SV=1)

HSP 1 Score: 674.9 bits (1740), Expect = 2.4e-190
Identity = 325/453 (71.74%), Postives = 394/453 (86.98%), Query Frame = 0


Query: 1   MKLLLPRKRMHLIAFQRELVHFYSTTSKDSLYRRISPVGDPNVSVIPVLDQWVLQGWPVQ 60
           MKLL   K  +LIA +R LV+FYST  KD+LYRRISPVGDPN+SVIPVLDQWVL+G  VQ
Sbjct: 1   MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ 60

Query: 61  REELQKIVKELRIYKRFNHALEVSKWMSDKRYLPLSAVDISERMNLILRVHGLEQVEDYF 120
           +EELQKI+KELR+YKRF HALE+SKWMSDKRYLPLS  D++ RMNLILRVHGLEQVEDYF
Sbjct: 61  KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF 120

Query: 121 NSIPSQLKKFQVHVALLNCYAHEKCVDKANIVLQKMKEMGFDRTPLPYNIMMNIYYKIGE 180
           N++PSQLK++ VH+ALLNCYAHEKCVDKAN  LQK+KEMG+ ++ LPYNIMMN+Y++IGE
Sbjct: 121 NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE 180

Query: 181 YEKLDPLMQEMEEKDVSYDRFTYSIRLSAYSAASDIEGVDKILEQMESDPKIVLDWNCCV 240
           +E+LD L++EM+EK V YDRFTYSIRLSAY+AASD  G++K++EQMES+  IVLDWNC V
Sbjct: 181 FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV 240

Query: 241 IAANGYLKVGLVDKSLSMLKKSEGLLATARRRGSPFDILLKLYATSGKKDELHRVWNLYK 300
           IAAN Y KVGL+DKS+SMLKKSEG LAT +++G  F++ LKLYA +GKKDE+HR+WNLYK
Sbjct: 241 IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK 300

Query: 301 KEKVYNKGYMSMMRSLLILDDIKAAEHIFKEWETRKLSYDLRIPNMLLDAYCRKGLMEKA 360
           KEK++NKG++SM+RSLLILDDI+ AE I+KEWET+KLSYD+RIPN+L+DAYCR GL+EKA
Sbjct: 301 KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA 360

Query: 361 EAFINETMTGRGKFSINSWCYMASGYIQKDQLPLAVDKLKKAATLCPSELKNVKEILVTF 420
           E  +NE +  RGKFS+ SWCY+ASGY+QKDQLP AV+ LKKAA+LCPSEL  VKEIL  F
Sbjct: 361 EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF 420

Query: 421 LDGKQDVKEAEKVVDLLRAKD--KSYFSHDVLI 452
            DGKQDV+EAEKVV+LLR KD      +HD+L+
Sbjct: 421 SDGKQDVEEAEKVVNLLREKDNLNPARAHDILV 453

[Close]

BLAST of Sed0017099 vs. ExPASy TrEMBL
Match: A0A0A0LV44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073790 PE=4 SV=1)

HSP 1 Score: 669.5 bits (1726), Expect = 1.0e-188
Identity = 318/453 (70.20%), Postives = 390/453 (86.09%), Query Frame = 0


Query: 1   MKLLLPRKRMHLIAFQRELVHFYSTTSKDSLYRRISPVGDPNVSVIPVLDQWVLQGWPVQ 60
           MKLL   K ++LIAF+ E V+FYST  KD+LYRRISPVGDPN+SV P+LDQWVL+G  VQ
Sbjct: 1   MKLLQSLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQ 60

Query: 61  REELQKIVKELRIYKRFNHALEVSKWMSDKRYLPLSAVDISERMNLILRVHGLEQVEDYF 120
           ++EL+ I+KELR+YKRF HALE+SKWMSDKRY PLS  DI+ RMNLILRVHGLEQVEDYF
Sbjct: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYF 120

Query: 121 NSIPSQLKKFQVHVALLNCYAHEKCVDKANIVLQKMKEMGFDRTPLPYNIMMNIYYKIGE 180
           +++PSQLK++QVH+ALLNCYAHEKCVDKAN  +QK+KEMGF  +PLPYNIMMN+Y++IGE
Sbjct: 121 DNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMNLYHQIGE 180

Query: 181 YEKLDPLMQEMEEKDVSYDRFTYSIRLSAYSAASDIEGVDKILEQMESDPKIVLDWNCCV 240
           +E+LD L++EM+E+ V YDRFTYSIR+SAY+AASD  G++KI+EQMES+P IVLDWNC V
Sbjct: 181 FERLDSLLKEMKERGVYYDRFTYSIRISAYAAASDFRGIEKIMEQMESNPSIVLDWNCYV 240

Query: 241 IAANGYLKVGLVDKSLSMLKKSEGLLATARRRGSPFDILLKLYATSGKKDELHRVWNLYK 300
           IAAN Y KVGL+DKS+SMLKKSEGLLA  +++G  F++ LKLYA +GKKDE+HR+WNLYK
Sbjct: 241 IAANAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYK 300

Query: 301 KEKVYNKGYMSMMRSLLILDDIKAAEHIFKEWETRKLSYDLRIPNMLLDAYCRKGLMEKA 360
           KEK++NKG++SM+ SL +LDDIK AE I+KEWETRKLSYDLRIPN+L+DAYCR GLMEKA
Sbjct: 301 KEKIFNKGFISMITSLFVLDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKA 360

Query: 361 EAFINETMTGRGKFSINSWCYMASGYIQKDQLPLAVDKLKKAATLCPSELKNVKEILVTF 420
           E  +NE +  R KFS+ SWCY+ASGY+QKDQLP AV+ LK AA++CPS L  VKEIL  F
Sbjct: 361 EVLLNEMVIVRRKFSVESWCYLASGYLQKDQLPQAVETLKLAASVCPSRLNYVKEILAAF 420

Query: 421 LDGKQDVKEAEKVVDLLRAKDKSY--FSHDVLI 452
           LDGKQDV+E EKVV+LLR KD S+   +HD ++
Sbjct: 421 LDGKQDVEETEKVVNLLREKDDSHPARAHDYIV 453

[Close]

BLAST of Sed0017099 vs. TAIR 10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 339.3 bits (869), Expect = 4.6e-93
Identity = 179/460 (38.91%), Postives = 295/460 (64.13%), Query Frame = 0


Query: 1   MKLLLPRKRMHLIAFQRELVHFYSTTSK-----DSLYRRISPVGDPNVSVIPVLDQWVLQ 60
           ++L+LP+   + I  +  L H   TT       D+L RR++  GDP+ S+I VLD W+ Q
Sbjct: 7   LRLVLPKP--NYILRRSFLFHSGKTTPSPLDPYDTLQRRVARSGDPSASIIKVLDGWLDQ 66

Query: 61  GWPVQREELQKIVKELRIYKRFNHALEVSKWMSDKRYLPLSAVDISERMNLILRVHGLEQ 120
           G  V+  EL  I+K LR + RF+HAL++S WMS+ R   +S  D++ R++LI +V GL +
Sbjct: 67  GNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEHRVHEISEGDVAIRLDLIAKVGGLGE 126

Query: 121 VEDYFNSIPSQLKKFQVHVALLNCYAHEKCVDKANIVLQKMKEMGFDRTPLPYNIMMNIY 180
            E +F +IP + + + ++ ALLNCYA +K + KA  V Q+MKE+GF +  LPYN+M+N+Y
Sbjct: 127 AEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLY 186

Query: 181 YKIGEYEKLDPLMQEMEEKDVSYDRFTYSIRLSAYSAASDIEGVDKILEQMESDPKIVLD 240
            + G+Y  ++ L++EME++ V  D FT + RL AYS  SD+EG++K L + E+D  + LD
Sbjct: 187 VRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLD 246

Query: 241 WNCCVIAANGYLKVGLVDKSLSMLKKSEGLLATARRRGSPFDILLKLYATSGKKDELHRV 300
           W      ANGY+K GL +K+L ML+KSE ++  A++R   +++L+  Y  +GKK+E++R+
Sbjct: 247 WRTYADTANGYIKAGLTEKALEMLRKSEQMV-NAQKRKHAYEVLMSFYGAAGKKEEVYRL 306

Query: 301 WNLYKK-EKVYNKGYMSMMRSLLILDDIKAAEHIFKEWETRKLSYDLRIPNMLLDAYCRK 360
           W+LYK+ +  YN GY+S++ +LL +DDI+  E I +EWE     +D+RIP++L+  YC+K
Sbjct: 307 WSLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKK 366

Query: 361 GLMEKAEAFINETMTGRGKFSINSWCYMASGYIQKDQLPLAVDKLKKAATLCPSELKNVK 420
           G+MEKAE  +N  +        ++W  +A GY    ++  AV+K K+A  +     +  +
Sbjct: 367 GMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKAVEKWKRAIEVSKPGWRPHQ 426

Query: 421 EIL---VTFLDGKQDVKEAEKVVDLLRAKDKSYFSHDVLI 452
            +L   V +L+G++D++   K++ LL   ++ + S+D L+
Sbjct: 427 VVLMSCVDYLEGQRDMEGLRKILRLL--SERGHISYDQLL 461

[Close]

BLAST of Sed0017099 vs. TAIR 10
Match: AT2G20710.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 279.6 bits (714), Expect = 4.3e-75
Identity = 142/369 (38.48%), Postives = 240/369 (65.04%), Query Frame = 0


Query: 87  MSDKRYLPLSAVDISERMNLILRVHGLEQVEDYFNSIPSQLKKFQVHVALLNCYAHEKCV 146
           MS+ R   +S  D++ R++LI +V GL + E +F +IP + + + ++ ALLNCYA +K +
Sbjct: 1   MSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVL 60

Query: 147 DKANIVLQKMKEMGFDRTPLPYNIMMNIYYKIGEYEKLDPLMQEMEEKDVSYDRFTYSIR 206
            KA  V Q+MKE+GF +  LPYN+M+N+Y + G+Y  ++ L++EME++ V  D FT + R
Sbjct: 61  HKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTR 120

Query: 207 LSAYSAASDIEGVDKILEQMESDPKIVLDWNCCVIAANGYLKVGLVDKSLSMLKKSEGLL 266
           L AYS  SD+EG++K L + E+D  + LDW      ANGY+K GL +K+L ML+KSE ++
Sbjct: 121 LHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMV 180

Query: 267 ATARRRGSPFDILLKLYATSGKKDELHRVWNLYKK-EKVYNKGYMSMMRSLLILDDIKAA 326
             A++R   +++L+  Y  +GKK+E++R+W+LYK+ +  YN GY+S++ +LL +DDI+  
Sbjct: 181 -NAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEV 240

Query: 327 EHIFKEWETRKLSYDLRIPNMLLDAYCRKGLMEKAEAFINETMTGRGKFSINSWCYMASG 386
           E I +EWE     +D+RIP++L+  YC+KG+MEKAE  +N  +        ++W  +A G
Sbjct: 241 EKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALG 300

Query: 387 YIQKDQLPLAVDKLKKAATLCPSELKNVKEIL---VTFLDGKQDVKEAEKVVDLLRAKDK 446
           Y    ++  AV+K K+A  +     +  + +L   V +L+G++D++   K++ LL   ++
Sbjct: 301 YKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLL--SER 360

Query: 447 SYFSHDVLI 452
            + S+D L+
Sbjct: 361 GHISYDQLL 366

[Close]

BLAST of Sed0017099 vs. TAIR 10
Match: AT4G21705.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 261.9 bits (668), Expect = 9.3e-70
Identity = 152/426 (35.68%), Postives = 247/426 (57.98%), Query Frame = 0


Query: 21  HFYSTTSKDSLYRRISPVGDPNVSVIPVLDQWVLQGWPVQREELQKIVKELRIYKRFNHA 80
           ++ +   K +LY +ISP+GDP  SV P L  WV  G  V   EL +IV +LR  KRF HA
Sbjct: 17  YYTNRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHA 76

Query: 81  LEVSKWMSDKRYLPLSAVDISERMNLILRVHGLEQVEDYFNSIPSQLKKFQVHVALLNCY 140
           LEVSKWM++      S  + +  ++LI RV+G    E+YF ++  Q K  + + ALLNCY
Sbjct: 77  LEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCY 136

Query: 141 AHEKCVDKANIVLQKMKEMGFDRTPLPYNIMMNIYYKIGEYEKLDPLMQEMEEKDVSYDR 200
             ++ V+K+ +  +KMKEMGF  + L YN +M +Y  IG++EK+  +++EM+E++V+ D 
Sbjct: 137 VRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDN 196

Query: 201 FTYSIRLSAYSAASDIEGVDKILEQMESDPKIVLDWNCCVIAANGYLKVGLVDKSLSMLK 260
           ++Y I ++A+ A  D+E +   L  ME    I +DWN   +AA  Y+  G  D+++ +LK
Sbjct: 197 YSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLK 256

Query: 261 KSEGLLATARRRGSPFDILLKLYATSGKKDELHRVWNLYKK--EKVYNKGYMSMMRSLLI 320
            SE  L   ++ G  ++ L+ LYA  GKK E+ R+W+L K   ++  N+ Y+++++SL+ 
Sbjct: 257 MSENRL--EKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVK 316

Query: 321 LDDIKAAEHIFKEWETRKLSYDLRIPNMLLDAYCRKGLMEKAEAFINETMTGRGKFSI-N 380
           +D +  AE +  EW++    YD R+PN ++  Y  K + EKAEA + E +  RGK +   
Sbjct: 317 IDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAML-EDLARRGKATTPE 376

Query: 381 SWCYMASGYIQKDQLPLAVDKLKKAATLCPSELK-----NVKEILVTFLDGKQDVKEAEK 439
           SW  +A+ Y +K  L  A   +K A  +     K      +   +++++  +  +KE E 
Sbjct: 377 SWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVES 436

[Close]

BLAST of Sed0017099 vs. TAIR 10
Match: AT1G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 259.6 bits (662), Expect = 4.6e-69
Identity = 149/429 (34.73%), Postives = 251/429 (58.51%), Query Frame = 0


Query: 29  DSLYRRISPVGDPNVSVIPVLDQWVLQGWPVQREELQKIVKELRIYKRFNHALEVSKWMS 88
           +++Y++IS +  P +    VL+QW   G  + + EL ++VKELR YKR N ALEV  WM+
Sbjct: 67  NAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMN 126

Query: 89  DK-RYLPLSAVDISERMNLILRVHGLEQVEDYFNSIPSQLKKFQVHVALLNCYAHEKCVD 148
           ++     LSA D + +++LI +V G+   E++F  +P   K  +V+ +LLN Y   K  +
Sbjct: 127 NRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSRE 186

Query: 149 KANIVLQKMKEMGFDRTPLPYNIMMNIYYKIGEYEKLDPLMQEMEEKDVSYDRFTYSIRL 208
           KA  +L  M++ G+   PLP+N+MM +Y  + EY+K+D ++ EM++KD+  D ++Y+I L
Sbjct: 187 KAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWL 246

Query: 209 SAYSAASDIEGVDKILEQMESDPKIVLDWNCCVIAANGYLKVGLVDKSLSMLKKSEGLLA 268
           S+  +   +E ++ + +QM+SD  I  +W      A  Y+K+G  +K+   L+K E  + 
Sbjct: 247 SSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARI- 306

Query: 269 TARRRGSPFDILLKLYATSGKKDELHRVWNLYKK--EKVYNKGYMSMMRSLLILDDIKAA 328
           T R R  P+  LL LY + G K EL+RVW++YK     + N GY +++ SL+ + DI+ A
Sbjct: 307 TGRNR-IPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGA 366

Query: 329 EHIFKEWETRKLSYDLRIPNMLLDAYCRKGLMEKAEAFINETMTGRGKFSINSWCYMASG 388
           E +++EW   K SYD RIPN+L++AY +   +E AE   +  +   GK S ++W  +A G
Sbjct: 367 EKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVG 426

Query: 389 YIQKDQLPLAVDKLKKAATLCPSELKNVKEILVT----FLDGKQDVKEAEKVVDLLR--- 447
           + +K  +  A+  L+ A +   S     K ++++      + + DV   E V++LLR   
Sbjct: 427 HTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSG 486

[Close]

BLAST of Sed0017099 vs. TAIR 10
Match: AT1G28020.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 228.0 bits (580), Expect = 1.5e-59
Identity = 129/335 (38.51%), Postives = 196/335 (58.51%), Query Frame = 0


Query: 34  RISPVGDPNVSVIPVLDQWVLQGWPVQREELQKIVKELRIYKRFNHALEVSKWMSDKRYL 93
           RI+     N  +IPVL+QW  QG  V    ++ I+K+LR   +   AL+VS+WMS ++  
Sbjct: 41  RITDALHRNAQIIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKIC 100

Query: 94  PLSAVDISERMNLILRVHGLEQVEDYFNSIPSQLKKFQVHVALLNCYAH-EKCVDKANIV 153
            L   D + R++LI  V GLE+ E +F SIP   +   V+ +LLN YA  +K + KA   
Sbjct: 101 NLIPEDFAARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEAT 160

Query: 154 LQKMKEMGFDRTPLPYNIMMNIYYKIGEYEKLDPLMQEMEEKDVSYDRFTYSIRLSAYSA 213
            QKM+++G    P+PYN MM++Y  +   EK++ L+ EM++ DV  D  T +  L  YSA
Sbjct: 161 FQKMRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSA 220

Query: 214 ASDIEGVDKILEQMESDPKIVLDWNCCVIAANGYLKVGLVDKSLSMLKKSEGLLATARRR 273
             D+  ++K L + E    I L+W+  +  A  YL+     K++ ML+ +E L+   +  
Sbjct: 221 VCDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLV-DQKSL 280

Query: 274 GSPFDILLKLYATSGKKDELHRVWNLYKKE--KVYNKGYMSMMRSLLILDDIKAAEHIFK 333
            S +D L+KLY  +G ++E+ RVW LYK +  +  N GY +++RSLL +DDI  AE I+K
Sbjct: 281 KSAYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYK 340

Query: 334 EWETRKLSYDLRIPNMLLDAYCRKGLMEKAEAFIN 366
            WE+  L +D RIP ML   Y  +G+ EKAE  +N
Sbjct: 341 VWESLPLEFDHRIPTMLASGYRDRGMTEKAEKLMN 374

The following BLAST results are available for this feature:

BLAST of Sed0017099 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140106.1	1.6e-209	80.27	pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Momor...	[more]
KAA0056984.1	5.0e-190	71.74	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008442434.1	5.0e-190	71.74	PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-...	[more]
XP_011653157.2	5.5e-189	70.64	pentatricopeptide repeat-containing protein At2g20710, mitochondrial isoform X1 ...	[more]
XP_008442448.1	3.1e-176	68.04	PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-...	[more]

BLAST of Sed0017099 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKU6	6.5e-92	38.91	Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop...	[more]
Q84JR3	1.3e-68	35.68	Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop...	[more]
Q8LPS6	6.5e-68	34.73	Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX...	[more]
Q9C7F1	2.1e-58	38.51	Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis th...	[more]
Q93WC5	3.8e-52	29.98	Pentatricopeptide repeat-containing protein At4g01990, mitochondrial OS=Arabidop...	[more]

BLAST of Sed0017099 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CET9	7.9e-210	80.27	pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Mom...	[more]
A0A5D3DSH1	2.4e-190	71.74	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5A7UP59	2.4e-190	71.74	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B572	2.4e-190	71.74	pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cuc...	[more]
A0A0A0LV44	1.0e-188	70.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073790 PE=4 SV=1	[more]

BLAST of Sed0017099 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20710.1	4.6e-93	38.91	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G20710.2	4.3e-75	38.48	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21705.1	9.3e-70	35.68	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G02150.1	4.6e-69	34.73	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G28020.1	1.5e-59	38.51	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 168..210 e-value: 4.3E-7 score: 30.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 345..366 e-value: 0.0031 score: 15.6
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 345..366 e-value: 0.0027 score: 17.8 coord: 135..161 e-value: 0.0075 score: 16.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 61..218 e-value: 3.3E-16 score: 61.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 231..447 e-value: 1.2E-13 score: 53.1
None	No IPR available	PANTHER	PTHR45717	OS12G0527900 PROTEIN	coord: 16..441
None	No IPR available	PANTHER	PTHR45717:SF28	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 16..441

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017099.1	Sed0017099.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009058	biosynthetic process
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0005515	protein binding