Sed0017090 (gene) Chayote v1

Overview


Name	Sed0017090
Type	gene
Organism	Sechium edule (Chayote v1)
Description	transcription initiation factor TFIID subunit 4b
Location	LG11: 5706654 .. 5720491 (-)
RNA-Seq Expression	Sed0017090
Synteny	Sed0017090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAATTGATCTTGTTTCCCTCATGTAGCTTACAGGACGCCATTGATGGTGCTCTTCTTCTTCTTCTTCTTGCAAAGATCGTCGGTTTCTGCAAAAACAGAGAAGCATCTCAAGCTTATCTCAGCCTGCTTTTCTGGTATCTTCATTTTCTTCCTTAGGGTTCAACTTTTTTTCTCTCGCGCAATTCCTCAATTTTCAGGCCGTTAGCTTTTGGTTTTTCATGTGACGCGTTCCGATTGCTTTTTTTTTCCATGGAATCGTTCTAGATTATAGTCGCTTTTGAAAATTTCCTTTTTCGGGATTATGTTTTTGTTTTCTTCCGTTAATTGCTGTTATACCCAACTTTGGATTTGCTCATCGATTGATGATTTATGCTTCACTTGCTTCCCTTTCAATTTTTCTGCTGTTCATATCTGTAGTTTGTTTGTTTGTTCATCTTTTCAATTGGAGGAAAAAAAGGGAAATTAAGGAAAATCAAATTGGAATCCCTAATTTTAGTTTCTTATTATTCTTATTCACGCAACAAATAGCCGCCATAGCCTCTTCCCTCTCGCATTTTCTTCTCCAACGAGCCGTCTCAAAGGCCGACAACATTACCCACCATTCGATCTGCTTACTCCCTTGTGAAGAGCAACACCCCCGCACGCCCAAGTGGTCTGTCCGACGGCGAGAACGGGCTCTCATCGAGGCACATTGGACCCATGACACTTATGATACTTATGTTACTAGACTGGTTGTTTGAGCGAGCTCATATGTTTTGATTGAGCTTGACATGGTTTATGGTTTGCCATCTTTCGATTTACTTAGTTTGTGCGTGTTGAGCATGACACTTATGTTACTAGTTTTAAGAAGCATGTTGGATGAATTTGAACATGATGTTTGTTTGTTTGTTTGATGTTTGGTGGCTCACCAAGTGTGATACTTGCCGAGCAAATAGTTTTGCAAGTGGTTATTTTCTCTTGAGCTTGGTGATGCGGATAAAGAGGCAAGACGTGGACACCATCAGTGGCTTGAAGTTTTCTTTCAATAGTGATTTTGTTTAAGCAATTAAGTTTCAATATTTTGGAACTTAGATTGTGTGTAGGTTGCGTTCTTTGATTCTTAAGGTTGTTTTTGGGTACTAAGTTAACTCAAGTGCAGTTTGTTTTGTTTCAAAAGCTATATTTAGGTTTTTTTTTGCTAGAACATTGTTTCTAGAACAAAAGAATTTGCATGTTGTTAGAGTTTAACATTGTTCCTCGAAGCTTAGGGTTTAGAACCGTTATGTTTTCATTGTGCTAGAAGGTTGTGTTTGGTACATTGTCCTAGGAGAAGGGATTTTTGTTTTGATGTTATCCTCCTTTAGAAGTGCCTAGAATTTGTTTTCTGGTGTTCAAAATTTCTGGGTAGCTTATAGTTATGTTGTTATAAAGGTCGAGCGAGCACCAAATACAACTCTTTGGCAGCTTTGCCAGTCGTAGCTAGCTTCGCTGCACTTGCTTGTCTATGCTTTGTTCTACAATTTGTAATAGAATATATATATATAAACTCGGGAAGGATTCAACTTTTCAGTCGGCTGGCAGCTTCGCTTCTTGGCTTCTTGACTTATTAACCTCTGCAACTAGGATAGAAGTACTTGACTGTAAAGGTTATGGAAGTGTGTTAGAAGATTCGGGAGAGGTGCAAACAATGCTGCTTGAAAGAGTTTCCTTTTGTAGTTCTCCATTTTTTTGGTGTATCATGGATGTAAGTTGGGCAACATTCCTAGAGTAGACGGCCAAATTTTGGGGTTGTTACAGTTTCCCTATTATTTCAGTTGCGTCTGATTGGGTTGTCGTCTTGAAGAGCAGTGATTAAATCATTGCTCCTTTCTTTTGTTGTAGAACGCTGATTTCTTCCAGCTTCTTTTCATATTTTCTGATTTTTTTGTATCTGTTTTATTCAATCTAATTGATGTTAAATCTCTGAACAATTCCATCAATATTTTTCTAGAATCTGAATCCATTCTCAATCACTTGCATGCTCTATTACCAATTTGGTAGTAATAACCAGATCTGGAAATGATAACTAGAAAGAAATGGAGCAGAATTGAAAACATATTGCTGTACAAAGAAATTTGTTAAGCATTCCAAGCATTCGAAAGTTAATTTAAGGATCGATTATTCAAGAGGTTTAGTTCTCTATGATTAAGTTTGCTTGCCTAAAACCTCCGACATTCTCTATTTATCATTACTTTAATGAACTCCTTAACTAATGACTTGGATTTTTATTGTTCCTATTTCCCTACTAAGATGCCTAGAAATTTTATACTTTTGGCATCACGGGAATGAACTCGGCATTTTTCTTGTAATGGTATAAACTTGGTGTATCTAAAACTTGCATTATGTTAAACTGCGAATGTTGCAAATCAGTTTGAATCTCATTTGTAATTGTATAGGCCAGATCAAGCGCGCTAACTTGGTTTTCTATCTATTGGCTATGGGATGAATATAAATGATTAGTTTTTTTGTAATTATCATCCTAATTTATTTAACTTTGTCTTTCTTTCTCAGAGGAAGTAGATTTGCTGTTGTGTAAGGCACTTCTCAACTTGTTAGCTTCTATGCAATTTTAGAAGTTACATTGTTTGATTGCCTGTTAGCAAGGTCAAGTAGCCCAGGTTCATTGCACATATAGCTTGTTATGGATCCTTCTATTATGAAGCTTTTGGAGGATGACGAGGTTTTATCTCTTTCAGTGCTTGTGTATAAACGTTTATCCGGATTTAGAGGACATCATTTGTAAATTCTTACCGTATTGGATGTTTAATTATGAACAGGATGAAACAATGCATTCAGGTGCAGCTGTGGAGGCTTTTCAAGCTGCCTTGAATAGAGACATGGAAGGTGAGGGTTCGGCTGTTTCTCAGGCTTCTGAATCAGATGCAGGTATACATTATACTTCAGCCTGAACTTGTATAAATTGTTCTCGGTCTGAATAGATAATAAGAGAGGCTAAAATTTGTAGAGATCATATCAAAATGTGCATTTGCGGAATTGTACATGTATGATGTCGTTCCTATAGTATATAAATTAGGTAAATAAATTGCTATTCACAAGTTAAGATGATTCTTCTCTTGGTTTTAGTGAATTAGATGTTGAATTAACTTGAAAACACCCACTTTAGTATTTCTTTAGAGGCAACTAAATGAAAATGCTGTTTTCCAGAGAAGACATTTTTACCTTTTTGTATTTTTAGTTATTGCTTCATTGCCATAGCTTCACCTCCGGCTCCATCTGTATCTTGGATTTAATCTCGTGGGAAGATTTCACAGTTTAATACTGATTTTGTAATGTTGCATTTTAGGTTCCCATAATTCATTTTCACGCATTTTCTTATCATGAGATTTCTTTTGGCTTTTCAACTCCTCTGATCTTAAAACTGACTGTCATATCTTGTTCAAACTGCACTTTTTCCAGTAAATGATGAAAAGTTGTTGCAACTATGTAGGAAAAAATGTGTTTAAATTCAAACATAAAACTTTAGGTTGAGTGGCCTATGGATGTTCAGATTGAAAGTTGGAATGGCTGATTTGATTTTTGTTACTAAAATGCAGCCTTCACTCGAGGGAACAATAGCTCTTCTGGCCTCTCGCTACAAACTTCTAGTCAAAATGAAAACACTGAATCTAATGTACAACAAGATCAAAATTTTCGTCCGAAGCAGGAACAACATTCATCTTTGATGGAACTAGAGCGATGTGCATCATTACCTGAAAATCAGCAGCAACATAATGCTGCCCCCCTCCAAGCTTCAAAGAACCAACCCCAAGCAGGTGGTGAACAAGGGGAGGCAGAACAAGTGTCTGCTCAGTTTTCTCAAACATCAGGGCTGCAAGTTTCTGAAAAAGCTCCAATCCTCGTGAATGACTCAAACAGAATGCAGAACCGGGACAATGAATCTCAATACTTGAAGTTGCAAAAGATGAGTAATCAGCAGGCGATGGTCTCGGAACAGGCAAATAACTCAATAAATCGTAGTAAACAGGTACCTTTTGCCTCATTGATGCCCGTGTTGATGCCTCAGCTTGATAAAGACAGAGCCATGCAGCTTCAGACTTTATTTAACAAATTGAAGGTAAGCGTACTAGTTATTGCTTATAACAGTCACAACATCTGTAAAATTGACATTACATGTGTTGACCTGAGCTTGGCTAGACATAGGGATTGCCGAGGGAGGATTTAGGAGATTCTTCTTCACTTTCCTTTTTGTGAGAAAGGAAGGTATTTGCAGGCTGGGGTGTTGTGTGGGGTCTTTTGGAGGAGATGAAAGACAAAGTCTTTAGAGGGCTTGAGAGATCATAGAGGAAACCATCTCTCTACAAAGGTTGTCAAAAGAAGAAGATAACAAAATAAGTGAATTCCAAGATAAAGATATAGAGGGGGTGGGTGGCGACCGTGTTCAGTGATTTTTTGCAACAGCCTATTGCACCCACTGAACATAATTGTGAGATCCATGTGCATTTAAACTCTCTCTCTCTCTCTCTCTCGCTTTGAACCAACCATCATTTAAAACAATTTTTTTTTTCATGGCCGTTTACAAAACCAGCTCTTAAATCAGTCCCTTTTCCACCTACACCAAAAAACCAAACCAACCTTTTGCATCCGGTACACATGCCTACCTTTCTAGTCCAACCACTCTTCGGAACAAGAAGCTTTTTAAAGCCCACCTCTATGATTTAACCATATTTTGAGATAACCCATCCATAGAGCATGTAGAACCTCTTGAACCCTTGCCACCTTTACCCATCGATATCTTCTTTCTACCAGGGGATCAATCAATGAAAGTTCGAACATGCCTTCTTCTTCTACTCATCATGTTTCATCTAATCAATTGCCTGTTAATCTTCGGGAGATCCTTACTGAAAATGGCCTTTGATTATGTCCATTTCGCCCACGCTTCAAGTTATACGTAAAAAAAATAGCACTTTTCCACTACTGTGAAGAGGAATAAACAGAAGGGGGAATTGAAAATTTTGAAATCTAATAATCACTACGATAAATCAACAACCAAGGATTTATTAGTGGTAGCTACGATGGAGCAACGAGTCTTACTTTGTTTGTAGATAGTTTCTTTTTTTGGTTTATTCGTCATTGTTTTTCGTTGTTCGATGTTCTCTTAGTTTTCGTTTTTTGTTTTAATGTTTTTTTATATTCGTGACTACTCGAGGCCAGCTTGCGTGCATCTCGACTAATGTCACAAGATTTACTGCCTGACCCTGTAACATGTGGATGTCAAAGAAACTTGTAGGAAATTGATTCCTAGGTAGGTGGCTACCATGGATTGAATCCATCCCCTCTTAGCTCAACAAGACCCTCTTGACCACTAAGTCACTCCATGATAGTTTTCTCTTGGTTTTCGTTTTTCTCCTTGTGGAGTCTTTTCATGTATTCCTCATTTCATCTTATAGTGCTGGAAGTTCTATCCAGTTTCATTTATCAACGAAATGTGTTCTATTAAAAAAAAATGATGTTAGGTGCATGAATCTGCCCTAAGCAAAGGATTAACTAGAGAAGTAGTAGGGTTGTATTTACCAATTGATCTATGTCATTTCATATTCCTTCTAATATGCATGGTTTAAATCATTTCTTTATTATAAAAAATTATAAATATACGAGTCTTGTTTGTGTGACTGTGCCTTTCTTTTCAATCTTATTAATTTATGAAGAAATGTGTTGAATAAAATGGTTGGACGATTCATGATTGTATAGGTTGTCTCATATGATTGTAACTTGTATTTTAGAGGAATGAAATGAACAAAGATGATTTTATCCGGCTCATGAGGGGTGTTGTGGGCGATCAGATGCTCAGATTAGCAGTTTGTCAAGTTCAATCTCAGGTCAGCTTTAAATTGATTTCTTGTTATGAAGATTTTATTTTGTATATACTAATTACTTTCAATCAGAAATTATTCGTGGTTCCAGTCTTAACCTTTTTCATTTGCAGCCTCCACCTTCAGTAAGGCAACTTTCTCCTAGAATGTCATCTATGGGTCCCGGTGCACCAAATTTCTCTGATCCACGACCGTTCGCACAACTTCATCAGAAAGGCATGAATTCCCCTGGAGTTCAATCATACATCCCCTCTTCAGCATCCCAAGCGCGGACTAGTTCAGGCTATCCTGCCATGGACAAGAATATGCAATCCTTACGAGAAGTAGAACAGAGAACTGATGGTAATGGAAATCAACTAACTTCATCCAGCCCTGGCACCATTCAGGAAAGGGAACGCTCCTCAGTTCCTGTTTCAGGACTTGAGAAGCAGCAACTACACTTCCAACAGAAATCTTTTGCCATGTATGGAAATAGTGGTAATTATCACCCGTATACGGGGTCAAACATGAATGCCCCTTCATTGTCTCATAAACCCCACACTCATGAGGGTCAAGTGAAGCAAATTCCCCAGCAGGCTCCCAGTTTTGACAGGCTAGTTACTATAAATGATTCCAAGCGTGTGCAGGGTGGAAACATTCCACACTTGCATAACAACTTAGCTTCGCAGCAAAATCCAGTTTCCTGGAAACCCTCAAGTAAAGAGCAGAACATGGGCCCTTTGTCATCAATGGGTTACATTAAACAAGAACCTTCCGATCAGGGTTCAGAGCAGAACAAACCCCAACTTTCGAATTTGCAGGGTTTGTCTTCAGTTTCTGGCATCCAGGCTGAACAAGTTAACGCAACCCCTGGAATTGCGAAGGATGCTCTTGAAAAACAAACTTCTAAAATGGGTTTTCCTACATCAAGCAATGTTATGCCTCCAACATCTACCAACGCAGCAAATTCAATTTCTTCCGATGCAAATTTCCTACATGAGTCTAGTCCTGCAGTAAGTATTGCTAGATTATACTTTGGTCCTACATTTAACTCTGTAAAAGTCAAAATTGCATGTTTATTTTGACTGCACATTTGTCAGGCAGTAATCTTATTCGTTTCTGACTCATCTGTCCTTATATTTCCTTACTTGTTATAACCTCATAGCTATTTATTTTGTTTCTTATTTATTGAACTAAAATAATTGATAGATAGTTTATTTTACACCTGGTTCATCAGTTTCCTTGCATAATCTTTTGAAGTCTGTTGCAATAAATTGTACAAGTTAATATAAACATATATCTATATCAATATATATATGTATTAAATGACTGAATTGTACCCGTCTCTGCTATGTCATTATATATCTTCATGAAGAATGTATCAGTATTTCTCAATCTTATGCCCTTGGCTTGCTAATATAATGTATCCGCTGGTTGCGGACTAATTGCAATGGGCCCTCTTTTTTGGATTTGCAGTTAAGCTCTCAGGTTCCTTCTGCAACTACTCCTGGAATGCAAAATAGGATATCTCAAAAAAAAGCTGTCATTGGCCAGAAGAAGCCTCTTGAAACACTTGGCTCTTCACCACCCCTATCAAGGTGAGCCTACTTTAACTCTCATCTTAAATTCTGGAAGTAAAGTTTATTTTGGAATATTTAAAAACAAATGGCTCATAACCTTGTTGATCTTTTCAAATATATTTGGTGCATTACCAATAGTAAGAAGCAAAAAGTATCTGGGGCATTTGCGGATCAGAGCATTGAACAACTTAATGATGTCACTGCAGTTAGTGGAGTGAATATTCGGGTACAATTCTTATATTTCTTGAATGGTTAGTTCTAGTTGGTACTAGAAAAACCTGAATCCTCAAGAAATGTCTGATTTTGGGTAGGAAGAAGAAGAACAACTATTTTCTAGTGCAAAAGAGGATAGTCGAGCTACTGAAGCTTCACGGAAGGTTGTACAAGAAGAAGAAGATAGGCTTCTATTGCAGAAAGCCCCATTGCAGAAAAAGCTGGTGGAAATCAGTTAGTGTCCAATTCTAATCAATGTTTGGTTTGTTCTGTTTAAGCGAATAATATTATTGTTTGCGCTAACCAAGCAGAAGGAACATTCTTATGGTGATTGATTAATTGCTAATTTGTGTATTTGTTTGTGGCAGTGGCTAAATGTGGTTTGAAGGGCATGAGCAACGACGTCGAGAAATGTCTCTCATTGGTAAGACACTGTCACTCTGATAATTTTCTTGGGTGATGTAATAACAACAGTAACTGTATCTTCAGTGTGTAGAGGAAAGGCTACGTGGGATTATTAGTAATTTAATCAGGCTGTCAAAACAGGTCAGTGTATTTCCCTTCATTTCTAATTCGAGTTTTCTTCTATTTCCCTCATTTTCGTACTTTATTACAGAAGCCGAATCTAATTATATATTCATAATTTTGATTGATCCCTCTAGCGAGTGGACAGCGAGAAACCAAGGCACCGAACATTTATTACTTCAGATGTTCGACAACAAATCGCGTTAGTTAACCAAAAGGCCAAAGAAGAATGGGAGAAGAAACAGGCTGAAGAAGAAAAACTCCGAAAGCTTAATGATGTGAGCTTTTCTTTTTGCTCTTCCTGCTTTTGTTCTAAAGACTCTAATCAGGACTGTTCAATAGCATCCTTTATTTGAAGAACGTAGTATAACTATCATCCCTAATGGATTTAGGAAAGAGTTTAGTACTTTTGAGTTTTGATAATTCTTTGTCTGTTTGTCTACATTGAAACTTATTAAATCACGAATTAATCCAAAAACTAAGTTGATGGGTTGGAGTAAATTTAATTATATCAATTAATACTCTCCCTCATTTATAGATTTGGAAATTTGAGAATGCCCATCTAGTGAAAATTATTATTGATTGAGGATGAAACGACTTGACAAGGATTTAAATACAAGACCTTTGGTTCTGAGGCTATGTTTTTTTTATAAACTTCTTATACCATGTTGTAACATGTTAATTCACCCAATCAACCCAAAAGTTAAGCGGATGTGTTGAGATAAATTTAATTATATCAACCAACAATCTGAGGTAAATTTTTAATTCCATATTTTCATTTTTTTTGAAAAATATATCTCCATCTTTTTATTGACTGACTTTCCTCTATTTTTGCAAAACTAAGCTCGTTTGCCAAATATTTACGGGATGTGGTATGTTAAAACATAATTAATAATTGTACCAAGCATAATTCTGATAGAAATTACCACACTATTTTATTAAACTACGATAAATCTCTCGAGAGAATCTCTCAAAGAGCCCAGAGTACAAAGACGACAATTCAATTGCATGATTCCCAAAGACCTATCATCTCCTATTTATAACCCTAAACCCTAATTAACTAAAAGACTAATAATAGGCCCAAGCCCAATGCAATTAAAATAGCAATTAACTAATACATAATAAATACTAATACTAATATTCCTAAAACTCCAAGGTCTGGATCGTATCAATACTTTCCCCCCCAAGAGCCACCTTGTCCTCAAGGTGTTCCATCTCCGATGCTATCTTTCTGTGACTCCGTCTTACCGCGAAAAGTATGTCACATCAACATCCTGGTAATTGTGCGCATCTCGAACGACCCACACATCCAAATTTTGGAGTTCTTTCTTCTGACAACGATGTCCCGGGACAAATCGTTCATCACAGCGAAAGCATAACCCTTTGTCCTTCTTTGCTCGAATTTTGGCAAAGTGAGTTTTTACAGTCGCGGGTTAATGGTTGTAGTCCTGTGAGAAGGAGTCTCTGTGCTTCCAGTTCCCGATGCAATCGTTCCCGCTTTAGCCTTGACCGTTGCAGAAGTACTTTCCTCATTTTGGGTAGCCTGAAAAGCAAAATCATCCTCAATCACCTGTGCCATAAACTTCTTATCCTGAATCCCAACAGGTCGCAGTTTCCTCATTTCACTTCTAATTTCTGCCTTCAACCCGCTTTCCCATTTCCCTTCCAATGCACTTGCACTAATCTCACGCATTCCCTTTGCATACTTCTCAAACAGTCGTCGATACTCTTTAACTATTCCAACCTGTTGTAAGCTCATCAGATTGGCGTACTTGTTGTCATTAATCGTTGGTTGGAAACGGTGCAATAATAGTTCTCGGAATTCTTCCCAAGAACTGATCGGGGATCGATCTTCCTCATACTGCAACCATTCCAAAGCCTCACCCTCCATACACAAAGCTGTAGCATCGACCCGTTCCTGTCCTTCCAACCGGTTTACCCAAAAGTATCGTTCTACTCGACACAACCATCCGTCTGGATCCTCATCGGTAAGCCCTTTGAATACCGGCATCTCGAGTTTCCGTAATCTCCTGTCTAACACCGACCCTTCTCTACCTCCTGTTCTCGGTCCTCCTCGTTCGTAACGATCCTCCCACTCCCTCCAGTCCTCTCGGTCTAAATGACATTGATTATCCCATCCCCGGTCGTTCCAACCGTCACGCGCTACCGGCCTATCATAACTGATGCGCACACTCCTCCCCTCTGTAAACTCGTTGCCTCGACCATCGACCTTCGGTTCCCCCTTTCGATCGAATCTCGGTCCCCCACAATCGAAACGGCTCTCTCTCCGGTCCAACCTGGCTGACCCAGACCGACCCGGCCCGACCAGCCCCGCCCCGGACCGGTCCTCCTGGGCGCTGCGTGCCACACGCCGCCCGGTCCCGCGCTTGACCCAAGCCCACCACCCCGGCCTTGCTCGGCCCTGACTCCGCACACCGCCATGCCCGCGCCCCAGCCCGAGGCCTCAGCGCCGCCTATGCCCGACCCCAACCCGAGTCTGGTCCCCCCTGGCCGCCGCCGTGCCACACGCCTCCCGATCCCACGCCCGCCCCACCCACGCCTCGACCCGCTCGCCCCGGCTCGCGACACCCAGAGCAAGACTCCCAGCCCGGATTCCGCCGCCCGGACCCGCTCCCCAGCACCGGCTCTCGTCGCCCGGACTCCCCCATCGGCCAGGTCCCGCGCCGCGCTCAACCATGCCCCCGCTCATGCCCACGTCCCGGAAATCCGCCCTCGCCCTCGTAGCCTCACGCCCAGCTCCTCCCCGCCCGACACCCCGGCCCGGTCCCGGCCGGTCCCGGCCCGGTCCCGGCCGGTCCCACCCGTCCCAGCCACCCCCTCGCGCCGAACGCTACCCCCGAGCCACCCACGTCACCGGCGCCGCTCGCTCTACCCAGCCCCTCCGAGCCCGAGTGTGCGACCCTCGACCCCACGTCGCCCTGGCCCTTCGCGTCGGCCCACCCTGCCGCGACCTCCGCAGCGCCACGCTTCCTCGCCGACCGCCACAGCCCCTGCGTCGCAAGAACCAGCCGCAGCCGCCCCGCTCGATCCCTCCCCCGTAGCCTCAGGCATCGAGCCCTTCCCCTTGTCTGCTCGGATTGTCTCCACTAAAAGTTCCAGATTTCGGTTCATCGTCTCGAGCTTCGAATCCTGCTAATCCAGCCTTTTCCCTAACCTTTCTTCCATCGCTTCCATCCTCGCGTTAGTCTCCTGTAACTTCTTGGCCAAGTTGGCCGTTCCTTCTTCACACTCTTGCATCCTGGATTCCATCTTAGTAGTAACCATTCTCGGATCGACAAATGGCTCTGATACCAAAATGATAGAAACTACCACACTATTTTATTAAACTACGATAAATCTCTCGAGAGAATCTCTCAAAGAGCCCAGAGTACAAAGACGACAATTCAATTGCATGATTCCCAAAGACCTATCATCTCCTATTTATAACCCTAAACCCTAATTAACTAGAAGACTAATAATAGGCCCAAACCCAATACAATTAAAATAGCAATTAACTAATACATAATAAATACTAATACTAATATTCCTAAAACTCCAAGGTCCGGATCGTATCAAATTCCCATTCAATATGTTTGAGAAAAAAATTCTCTTCCTTCCGTGGGGGTGTTTCTTTTTTTTTTTTCTTTTGGGGGATTTTTCATGAATAATGAAAAAGGGGAAAATTCTATGAATGTCAAAATTTTAGAAAAAAATTAATATAAAAAAATAGATTCAATCAAGTTAAATTGATGGCTTTCAATTCACTGATTGAAAATGGTCAAGTAAAATTGATTGGAAACCATGAAAGCTAAATATTTGTATGAAATATTTGTTAAAAGTTGTTATAATTAAAATAGAGCTGCTAGAATTTGCTATCTATAAGATAATTTAATTTTTTTATGCAGCCTGAGGATAGTCAGGGGGTTGCTGGTGACAAGGAGAAAGATGACGGTCGATTAAAATCGGTTAATAAGGTATTGAGACCGACACTCGTGCCTAAACTTCAACATCTTTTGATTGATTAGGAGTTCTTTGTTGATTATTTTTTTATACTATCTTTTTCTGGTGTGGTTTAGGTAAACAAAGAGGATGACGATAAAATGCGGACAACAGCAGCAAATGTTGCTGCACGAGCTGCTGTTGGAGGAGATGACATGCTATCAAAATGGCAACTTATGGCTGAGCAGGCACGACAGAAACGTGAAGGTGGAACGGATTCAGCTTCTGGTTCTCAGTCAGGGAAAGACACTGGCCGTAAATCTTCATCTTCAGCAGGAAGACATGGGAAGGACAATCAAGAAGGTGATCGAAAAGGTAACACTCCATCTGGCACGTCTTATACAGCTTCAAACTCGACGACATCATCATTTCGGGATCTCAAAATCAAACATGCTTATGTAATTCACTTTTGCCGCACAGCTTTTGCACACACAGCAACAATAACCTAGTGAACCCGTCGACGAGGGCAGCCCCAAGACATGCTTCAATGAGAGATCCCTATTTCGAGACCATTAGAAAACGTTTAAACTAGAATACCCTCCAAAGTATCTCGGTTCCACAGTCTAGGAATGGACCAGTGGTGTCTCGGGTATAGAGGAGTGAAGCTCCGATTTCCCAGTTTGCAGAAAAAAAACCCTAGTGAACCCTCATCTAGGGTGGTGATAGAAGTTGGAAATGACAATCATGAACCCTCATCAGCAACAATAACCTAGTTTTAACTTATTTATGACTATCATCCCCTTATCCTTTTCTGTTTGATTGCTTTCTGTAAATGAGAGAGAAGAAAGAAAAGGAAAAGGAAAAGGAAAATAAGCAATATTGTAACGCCATCCATCTTGATTTTGCGCAGGAAGTAGCAGAAAATTTGGTAGGAACCAAATCAATGCAACACAAACAAGGGTGGCTCGTAGTATTTCTGTCAAAGATGTCATTGCTGTACTGGAAAGAGAACCCCAGATGTCGAGATCCACCACAATGTATCGTTTGCACAACAGAGTCCGTTCCGAAGAAACTGGCGAATAGAACTGACTACTACGAGAAAACTAACATCCTTGCTGGAGCGCGTTTGTGGGTCATCTATCTATCTGAATTAAGGTATTCAAATATGATAAACTGCATTGTTTTAGAAATATATATATAACTGCCTAAGTTGGTAGCTTTCTAACAATCTGAAAAAAAAAGGCTTTCTCAAGACATTCTTCTGATTAGAAAGACTCTTGTCCAGGAAAGAAAACAAATCCTTTGGGAACTCTGGTTAGAAAAACAAAGCAATAGGAGTTTTCTTGGATAGTTTGGATGATAATTCTTTTATCTTTTGGGAAAGGGTGATTAGTTTAGCTTCAAAATGAAGCTTTCTTTGTAAACCTATTTGTAATTATAATCTTCATATTAGCCCACTGGAGTGCTATTGAGTAAGCTCCTAGGCGTTTTCTCATTATTGTTGTTATTATTTTATACATAGATGATAGTCCTATTGTAGGACTGAAACTTGAACATAGCTCAGTGGTAATTGACTTGTACTCGTTATTGTTGTGTCAACTCATTATCCCATTTTGTGATATATTCTTGTTTGCAAAAAACCATAAAATCAAAGCTATGTGGTCGATGTTTTTTTACTCTTTTTTTTTAGACAAGGGTAACCACACCCTGTCCTTAGGCCAGACATCGGAGACTTCGAAGGAGTAATGTC

mRNA sequence

AGAAAATTGATCTTGTTTCCCTCATGTAGCTTACAGGACGCCATTGATGGTGCTCTTCTTCTTCTTCTTCTTGCAAAGATCGTCGGTTTCTGCAAAAACAGAGAAGCATCTCAAGCTTATCTCAGCCTGCTTTTCTGAGGAAGTAGATTTGCTGTTGTGTAAGGCACTTCTCAACTTGTTAGCTTCTATGCAATTTTAGAAGTTACATTGTTTGATTGCCTGTTAGCAAGGTCAAGTAGCCCAGGTTCATTGCACATATAGCTTGTTATGGATCCTTCTATTATGAAGCTTTTGGAGGATGACGAGGATGAAACAATGCATTCAGGTGCAGCTGTGGAGGCTTTTCAAGCTGCCTTGAATAGAGACATGGAAGGTGAGGGTTCGGCTGTTTCTCAGGCTTCTGAATCAGATGCAGCCTTCACTCGAGGGAACAATAGCTCTTCTGGCCTCTCGCTACAAACTTCTAGTCAAAATGAAAACACTGAATCTAATGTACAACAAGATCAAAATTTTCGTCCGAAGCAGGAACAACATTCATCTTTGATGGAACTAGAGCGATGTGCATCATTACCTGAAAATCAGCAGCAACATAATGCTGCCCCCCTCCAAGCTTCAAAGAACCAACCCCAAGCAGGTGGTGAACAAGGGGAGGCAGAACAAGTGTCTGCTCAGTTTTCTCAAACATCAGGGCTGCAAGTTTCTGAAAAAGCTCCAATCCTCGTGAATGACTCAAACAGAATGCAGAACCGGGACAATGAATCTCAATACTTGAAGTTGCAAAAGATGAGTAATCAGCAGGCGATGGTCTCGGAACAGGCAAATAACTCAATAAATCGTAGTAAACAGGTACCTTTTGCCTCATTGATGCCCGTGTTGATGCCTCAGCTTGATAAAGACAGAGCCATGCAGCTTCAGACTTTATTTAACAAATTGAAGAGGAATGAAATGAACAAAGATGATTTTATCCGGCTCATGAGGGGTGTTGTGGGCGATCAGATGCTCAGATTAGCAGTTTGTCAAGTTCAATCTCAGCCTCCACCTTCAGTAAGGCAACTTTCTCCTAGAATGTCATCTATGGGTCCCGGTGCACCAAATTTCTCTGATCCACGACCGTTCGCACAACTTCATCAGAAAGGCATGAATTCCCCTGGAGTTCAATCATACATCCCCTCTTCAGCATCCCAAGCGCGGACTAGTTCAGGCTATCCTGCCATGGACAAGAATATGCAATCCTTACGAGAAGTAGAACAGAGAACTGATGGTAATGGAAATCAACTAACTTCATCCAGCCCTGGCACCATTCAGGAAAGGGAACGCTCCTCAGTTCCTGTTTCAGGACTTGAGAAGCAGCAACTACACTTCCAACAGAAATCTTTTGCCATGTATGGAAATAGTGGTAATTATCACCCGTATACGGGGTCAAACATGAATGCCCCTTCATTGTCTCATAAACCCCACACTCATGAGGGTCAAGTGAAGCAAATTCCCCAGCAGGCTCCCAGTTTTGACAGGCTAGTTACTATAAATGATTCCAAGCGTGTGCAGGGTGGAAACATTCCACACTTGCATAACAACTTAGCTTCGCAGCAAAATCCAGTTTCCTGGAAACCCTCAAGTAAAGAGCAGAACATGGGCCCTTTGTCATCAATGGGTTACATTAAACAAGAACCTTCCGATCAGGGTTCAGAGCAGAACAAACCCCAACTTTCGAATTTGCAGGGTTTGTCTTCAGTTTCTGGCATCCAGGCTGAACAAGTTAACGCAACCCCTGGAATTGCGAAGGATGCTCTTGAAAAACAAACTTCTAAAATGGGTTTTCCTACATCAAGCAATGTTATGCCTCCAACATCTACCAACGCAGCAAATTCAATTTCTTCCGATGCAAATTTCCTACATGAGTCTAGTCCTGCATTAAGCTCTCAGGTTCCTTCTGCAACTACTCCTGGAATGCAAAATAGGATATCTCAAAAAAAAGCTGTCATTGGCCAGAAGAAGCCTCTTGAAACACTTGGCTCTTCACCACCCCTATCAAGTAAGAAGCAAAAAGTATCTGGGGCATTTGCGGATCAGAGCATTGAACAACTTAATGATGTCACTGCAGTTAGTGGAGTGAATATTCGGGAAGAAGAAGAACAACTATTTTCTAGTGCAAAAGAGGATAGTCGAGCTACTGAAGCTTCACGGAAGGTTGTACAAGAAGAAGAAGATAGGCTTCTATTGCAGAAAGCCCCATTGCAGAAAAAGCTGGTGGAAATCATGGCTAAATGTGGTTTGAAGGGCATGAGCAACGACGTCGAGAAATGTCTCTCATTGTGTGTAGAGGAAAGGCTACGTGGGATTATTAGTAATTTAATCAGGCTGTCAAAACAGCGAGTGGACAGCGAGAAACCAAGGCACCGAACATTTATTACTTCAGATGTTCGACAACAAATCGCGTTAGTTAACCAAAAGGCCAAAGAAGAATGGGAGAAGAAACAGGCTGAAGAAGAAAAACTCCGAAAGCTTAATGATCCTGAGGATAGTCAGGGGGTTGCTGGTGACAAGGAGAAAGATGACGGTCGATTAAAATCGGTTAATAAGGTAAACAAAGAGGATGACGATAAAATGCGGACAACAGCAGCAAATGTTGCTGCACGAGCTGCTGTTGGAGGAGATGACATGCTATCAAAATGGCAACTTATGGCTGAGCAGGCACGACAGAAACGTGAAGGTGGAACGGATTCAGCTTCTGGTTCTCAGTCAGGGAAAGACACTGGCCGTAAATCTTCATCTTCAGCAGGAAGACATGGGAAGGACAATCAAGAAGGTGATCGAAAAGGAAGTAGCAGAAAATTTGGTAGGAACCAAATCAATGCAACACAAACAAGGGTGGCTCGTAGTATTTCTGTCAAAGATGTCATTGCTGTACTGGAAAGAGAACCCCAGATGTCGAGATCCACCACAATGTATCGTTTGCACAACAGAGTCCGTTCCGAAGAAACTGGCGAATAGAACTGACTACTACGAGAAAACTAACATCCTTGCTGGAGCGCGTTTGTGGGTCATCTATCTATCTGAATTAAGGTATTCAAATATGATAAACTGCATTGTTTTAGAAATATATATATAACTGCCTAAGTTGGTAGCTTTCTAACAATCTGAAAAAAAAAGGCTTTCTCAAGACATTCTTCTGATTAGAAAGACTCTTGTCCAGGAAAGAAAACAAATCCTTTGGGAACTCTGGTTAGAAAAACAAAGCAATAGGAGTTTTCTTGGATAGTTTGGATGATAATTCTTTTATCTTTTGGGAAAGGGTGATTAGTTTAGCTTCAAAATGAAGCTTTCTTTGTAAACCTATTTGTAATTATAATCTTCATATTAGCCCACTGGAGTGCTATTGAGTAAGCTCCTAGGCGTTTTCTCATTATTGTTGTTATTATTTTATACATAGATGATAGTCCTATTGTAGGACTGAAACTTGAACATAGCTCAGTGGTAATTGACTTGTACTCGTTATTGTTGTGTCAACTCATTATCCCATTTTGTGATATATTCTTGTTTGCAAAAAACCATAAAATCAAAGCTATGTGGTCGATGTTTTTTTACTCTTTTTTTTTAGACAAGGGTAACCACACCCTGTCCTTAGGCCAGACATCGGAGACTTCGAAGGAGTAATGTC

Coding sequence (CDS)

ATGGATCCTTCTATTATGAAGCTTTTGGAGGATGACGAGGATGAAACAATGCATTCAGGTGCAGCTGTGGAGGCTTTTCAAGCTGCCTTGAATAGAGACATGGAAGGTGAGGGTTCGGCTGTTTCTCAGGCTTCTGAATCAGATGCAGCCTTCACTCGAGGGAACAATAGCTCTTCTGGCCTCTCGCTACAAACTTCTAGTCAAAATGAAAACACTGAATCTAATGTACAACAAGATCAAAATTTTCGTCCGAAGCAGGAACAACATTCATCTTTGATGGAACTAGAGCGATGTGCATCATTACCTGAAAATCAGCAGCAACATAATGCTGCCCCCCTCCAAGCTTCAAAGAACCAACCCCAAGCAGGTGGTGAACAAGGGGAGGCAGAACAAGTGTCTGCTCAGTTTTCTCAAACATCAGGGCTGCAAGTTTCTGAAAAAGCTCCAATCCTCGTGAATGACTCAAACAGAATGCAGAACCGGGACAATGAATCTCAATACTTGAAGTTGCAAAAGATGAGTAATCAGCAGGCGATGGTCTCGGAACAGGCAAATAACTCAATAAATCGTAGTAAACAGGTACCTTTTGCCTCATTGATGCCCGTGTTGATGCCTCAGCTTGATAAAGACAGAGCCATGCAGCTTCAGACTTTATTTAACAAATTGAAGAGGAATGAAATGAACAAAGATGATTTTATCCGGCTCATGAGGGGTGTTGTGGGCGATCAGATGCTCAGATTAGCAGTTTGTCAAGTTCAATCTCAGCCTCCACCTTCAGTAAGGCAACTTTCTCCTAGAATGTCATCTATGGGTCCCGGTGCACCAAATTTCTCTGATCCACGACCGTTCGCACAACTTCATCAGAAAGGCATGAATTCCCCTGGAGTTCAATCATACATCCCCTCTTCAGCATCCCAAGCGCGGACTAGTTCAGGCTATCCTGCCATGGACAAGAATATGCAATCCTTACGAGAAGTAGAACAGAGAACTGATGGTAATGGAAATCAACTAACTTCATCCAGCCCTGGCACCATTCAGGAAAGGGAACGCTCCTCAGTTCCTGTTTCAGGACTTGAGAAGCAGCAACTACACTTCCAACAGAAATCTTTTGCCATGTATGGAAATAGTGGTAATTATCACCCGTATACGGGGTCAAACATGAATGCCCCTTCATTGTCTCATAAACCCCACACTCATGAGGGTCAAGTGAAGCAAATTCCCCAGCAGGCTCCCAGTTTTGACAGGCTAGTTACTATAAATGATTCCAAGCGTGTGCAGGGTGGAAACATTCCACACTTGCATAACAACTTAGCTTCGCAGCAAAATCCAGTTTCCTGGAAACCCTCAAGTAAAGAGCAGAACATGGGCCCTTTGTCATCAATGGGTTACATTAAACAAGAACCTTCCGATCAGGGTTCAGAGCAGAACAAACCCCAACTTTCGAATTTGCAGGGTTTGTCTTCAGTTTCTGGCATCCAGGCTGAACAAGTTAACGCAACCCCTGGAATTGCGAAGGATGCTCTTGAAAAACAAACTTCTAAAATGGGTTTTCCTACATCAAGCAATGTTATGCCTCCAACATCTACCAACGCAGCAAATTCAATTTCTTCCGATGCAAATTTCCTACATGAGTCTAGTCCTGCATTAAGCTCTCAGGTTCCTTCTGCAACTACTCCTGGAATGCAAAATAGGATATCTCAAAAAAAAGCTGTCATTGGCCAGAAGAAGCCTCTTGAAACACTTGGCTCTTCACCACCCCTATCAAGTAAGAAGCAAAAAGTATCTGGGGCATTTGCGGATCAGAGCATTGAACAACTTAATGATGTCACTGCAGTTAGTGGAGTGAATATTCGGGAAGAAGAAGAACAACTATTTTCTAGTGCAAAAGAGGATAGTCGAGCTACTGAAGCTTCACGGAAGGTTGTACAAGAAGAAGAAGATAGGCTTCTATTGCAGAAAGCCCCATTGCAGAAAAAGCTGGTGGAAATCATGGCTAAATGTGGTTTGAAGGGCATGAGCAACGACGTCGAGAAATGTCTCTCATTGTGTGTAGAGGAAAGGCTACGTGGGATTATTAGTAATTTAATCAGGCTGTCAAAACAGCGAGTGGACAGCGAGAAACCAAGGCACCGAACATTTATTACTTCAGATGTTCGACAACAAATCGCGTTAGTTAACCAAAAGGCCAAAGAAGAATGGGAGAAGAAACAGGCTGAAGAAGAAAAACTCCGAAAGCTTAATGATCCTGAGGATAGTCAGGGGGTTGCTGGTGACAAGGAGAAAGATGACGGTCGATTAAAATCGGTTAATAAGGTAAACAAAGAGGATGACGATAAAATGCGGACAACAGCAGCAAATGTTGCTGCACGAGCTGCTGTTGGAGGAGATGACATGCTATCAAAATGGCAACTTATGGCTGAGCAGGCACGACAGAAACGTGAAGGTGGAACGGATTCAGCTTCTGGTTCTCAGTCAGGGAAAGACACTGGCCGTAAATCTTCATCTTCAGCAGGAAGACATGGGAAGGACAATCAAGAAGGTGATCGAAAAGGAAGTAGCAGAAAATTTGGTAGGAACCAAATCAATGCAACACAAACAAGGGTGGCTCGTAGTATTTCTGTCAAAGATGTCATTGCTGTACTGGAAAGAGAACCCCAGATGTCGAGATCCACCACAATGTATCGTTTGCACAACAGAGTCCGTTCCGAAGAAACTGGCGAATAG

Protein sequence

MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDMEGEGSAVSQASESDAAFTRGNNSSSGLSLQTSSQNENTESNVQQDQNFRPKQEQHSSLMELERCASLPENQQQHNAAPLQASKNQPQAGGEQGEAEQVSAQFSQTSGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQAMVSEQANNSINRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNKLKRNEMNKDDFIRLMRGVVGDQMLRLAVCQVQSQPPPSVRQLSPRMSSMGPGAPNFSDPRPFAQLHQKGMNSPGVQSYIPSSASQARTSSGYPAMDKNMQSLREVEQRTDGNGNQLTSSSPGTIQERERSSVPVSGLEKQQLHFQQKSFAMYGNSGNYHPYTGSNMNAPSLSHKPHTHEGQVKQIPQQAPSFDRLVTINDSKRVQGGNIPHLHNNLASQQNPVSWKPSSKEQNMGPLSSMGYIKQEPSDQGSEQNKPQLSNLQGLSSVSGIQAEQVNATPGIAKDALEKQTSKMGFPTSSNVMPPTSTNAANSISSDANFLHESSPALSSQVPSATTPGMQNRISQKKAVIGQKKPLETLGSSPPLSSKKQKVSGAFADQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRATEASRKVVQEEEDRLLLQKAPLQKKLVEIMAKCGLKGMSNDVEKCLSLCVEERLRGIISNLIRLSKQRVDSEKPRHRTFITSDVRQQIALVNQKAKEEWEKKQAEEEKLRKLNDPEDSQGVAGDKEKDDGRLKSVNKVNKEDDDKMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGTDSASGSQSGKDTGRKSSSSAGRHGKDNQEGDRKGSSRKFGRNQINATQTRVARSISVKDVIAVLEREPQMSRSTTMYRLHNRVRSEETGE

Homology

[Close]

BLAST of Sed0017090 vs. NCBI nr
Match: XP_022153297.1 (transcription initiation factor TFIID subunit 4b [Momordica charantia] >XP_022153298.1 transcription initiation factor TFIID subunit 4b [Momordica charantia] >XP_022153299.1 transcription initiation factor TFIID subunit 4b [Momordica charantia] >XP_022153300.1 transcription initiation factor TFIID subunit 4b [Momordica charantia] >XP_022153301.1 transcription initiation factor TFIID subunit 4b [Momordica charantia] >XP_022153302.1 transcription initiation factor TFIID subunit 4b [Momordica charantia] >XP_022153303.1 transcription initiation factor TFIID subunit 4b [Momordica charantia] >XP_022153304.1 transcription initiation factor TFIID subunit 4b [Momordica charantia])

HSP 1 Score: 1451.8 bits (3757), Expect = 0.0e+00
Identity = 796/908 (87.67%), Postives = 840/908 (92.51%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDMEGEGSAVSQASESDAAFTRGNNSSSG 60
           MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRD+EG+  A SQ SESDAAF RG+NS SG
Sbjct: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDIEGDVPAPSQTSESDAAFPRGSNSISG 60

Query: 61  LSLQTSSQNENTESNVQQDQNFRPKQEQHSSLMELERCASLPENQQQHNAAPLQASKNQP 120
           LSLQ SSQNENTES+VQQDQNF  KQEQHSSLMELERC S PENQQ+HNA  LQ+SKNQP
Sbjct: 61  LSLQASSQNENTESHVQQDQNFLLKQEQHSSLMELERCTSAPENQQKHNAPLLQSSKNQP 120

Query: 121 QAGGEQGEAEQVSAQFSQTSGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQAMV 180
           QA  EQGE EQV  QFSQT+GLQ SEKAPILVNDS+RM NRDNESQYLKLQKMSNQQAMV
Sbjct: 121 QADHEQGEVEQVPVQFSQTAGLQGSEKAPILVNDSSRMPNRDNESQYLKLQKMSNQQAMV 180

Query: 181 SEQANNSINRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNKLKRNEMNKDDFIRLMRGVV 240
           SEQA+NS+NRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNKLKRNEMNKDDFIRLMRGVV
Sbjct: 181 SEQASNSVNRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNKLKRNEMNKDDFIRLMRGVV 240

Query: 241 GDQMLRLAVCQVQSQPPPSVRQLSPRMSSMGPGAPNFSDPRPFAQLHQKGMNSPGVQSYI 300
           GDQMLRLAVCQVQSQPPPSVRQLSPRM SMGPGA NFSDPRPFAQLHQKGMNSPGVQSYI
Sbjct: 241 GDQMLRLAVCQVQSQPPPSVRQLSPRMPSMGPGASNFSDPRPFAQLHQKGMNSPGVQSYI 300

Query: 301 PSSASQARTSSGYPAMDKNMQSLREVEQRTDGNGNQLTSSSPGTIQERERSSVPVSGLEK 360
           PS ASQ R SSGYP MDKNMQSLREVEQRTDGNGNQLTSSS GTIQERERSSVPV GLEK
Sbjct: 301 PSPASQGRGSSGYPVMDKNMQSLREVEQRTDGNGNQLTSSSTGTIQERERSSVPVPGLEK 360

Query: 361 QQLHFQQKSFAMYGNSGNYHPYTGSNMNAPSLSHKPHTHEGQVKQIPQQAPSFDRLVTIN 420
           QQLHFQQKSFAMYG SG+YH YTGSN+NA SLS KP  HEGQVKQI QQAP+FDR VTIN
Sbjct: 361 QQLHFQQKSFAMYGTSGSYHQYTGSNINASSLSLKPQPHEGQVKQISQQAPNFDRQVTIN 420

Query: 421 DSKRVQGGNIPHLHNNLASQQNPVSWK-PSSKEQNMGPLSSMGYIKQEPSDQGSEQNKPQ 480
           DSKRVQGGN+PHLHNNL SQQNPVSWK  +SKEQN GPLSSM YIKQEPSDQ +EQNK Q
Sbjct: 421 DSKRVQGGNVPHLHNNLTSQQNPVSWKSTTSKEQNTGPLSSMSYIKQEPSDQVAEQNKTQ 480

Query: 481 LSNLQGLSSVSGIQAEQVNATPGIAKDALEKQTSKMGFPTSSNVMPPTSTNAANSISSDA 540
           LSNLQGLSS+S +QAEQVN TPGI+KD+ EKQ+SKMGFPTS+NV+PPTSTN ANSISSDA
Sbjct: 481 LSNLQGLSSISSVQAEQVNTTPGISKDSFEKQSSKMGFPTSNNVIPPTSTNVANSISSDA 540

Query: 541 NFLHESSPALSSQVPSATTPGMQNRISQKKAVIGQKKPLETLGSSPPLSSKKQKVSGAFA 600
             +H+SS  L SQVPSATTPG+QNR  QKKA +GQKKPLE LGSSPPLSSKKQKVSGAF+
Sbjct: 541 VSVHDSSAMLGSQVPSATTPGLQNRTLQKKATVGQKKPLEALGSSPPLSSKKQKVSGAFS 600

Query: 601 DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRATEASRKVVQEEEDRLLLQKAPLQKK 660
           DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRA+EASR+VVQEEE+RL+LQKAPLQKK
Sbjct: 601 DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLILQKAPLQKK 660

Query: 661 LVEIMAKCGLKGMSNDVEKCLSLCVEERLRGIISNLIRLSKQRVDSEKPRHRTFITSDVR 720
           LVEIMAKCGLKGMSNDVEKCLSLCVEERLRGIISNLIRLSKQRVDSEKPRHRT ITSDVR
Sbjct: 661 LVEIMAKCGLKGMSNDVEKCLSLCVEERLRGIISNLIRLSKQRVDSEKPRHRTLITSDVR 720

Query: 721 QQIALVNQKAKEEWEKKQAEEEKLRKLNDPEDSQGVAGDKEKDDGRLKSVNKVNKEDDDK 780
           QQI LVNQKA+EEWEKKQAEEEKLRKLNDPED  GVAGDKEKD+ RLKSV KVNKE+DDK
Sbjct: 721 QQITLVNQKAREEWEKKQAEEEKLRKLNDPEDGSGVAGDKEKDESRLKSV-KVNKEEDDK 780

Query: 781 MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGTDSASGSQSGKDTGRKSSSSAGR 840
           MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGG DSASGSQSGKD  RKSSS+AGR
Sbjct: 781 MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGIDSASGSQSGKDAARKSSSAAGR 840

Query: 841 HGKDNQEGDRKGSSRKFGRNQINATQTRVARSISVKDVIAVLEREPQMSRSTTMYRLHNR 900
           HGKDNQE DRKG+SRKFGRNQ+++TQTRVARSISVKDVIAVL+REPQMSRSTT+YRL+NR
Sbjct: 841 HGKDNQEADRKGTSRKFGRNQLSSTQTRVARSISVKDVIAVLQREPQMSRSTTIYRLYNR 900

Query: 901 VRSEETGE 908
           + SE TGE
Sbjct: 901 IHSEATGE 907

[Close]

BLAST of Sed0017090 vs. NCBI nr
Match: XP_023554163.1 (transcription initiation factor TFIID subunit 4b isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554164.1 transcription initiation factor TFIID subunit 4b isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554165.1 transcription initiation factor TFIID subunit 4b isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1429.8 bits (3700), Expect = 0.0e+00
Identity = 791/908 (87.11%), Postives = 834/908 (91.85%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDMEGEGSAVSQASESDAAFTRGNNSSSG 60
           MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRD+EG+  AVSQA ESDAAF RG+N  S 
Sbjct: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDIEGDVPAVSQAPESDAAFPRGSNGPSS 60

Query: 61  LSLQTSSQNENTESNVQQDQNFRPKQEQHSSLMELERCASLPENQQQHNAAPLQASKNQP 120
           LSLQ +SQNE TES+ QQDQNFRPKQEQHSSLMELERC+SLPENQQQHNAAPLQASKNQP
Sbjct: 61  LSLQ-ASQNEKTESHAQQDQNFRPKQEQHSSLMELERCSSLPENQQQHNAAPLQASKNQP 120

Query: 121 QAGGEQGEAEQVSAQFSQTSGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQAMV 180
           QA  EQG+AEQVSAQFSQT+GLQ SEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQ MV
Sbjct: 121 QADREQGDAEQVSAQFSQTAGLQGSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQTMV 180

Query: 181 SEQANNSINRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNKLKRNEMNKDDFIRLMRGVV 240
           SEQANN +NRSKQVPFASLMPVLMPQLDKDRAMQLQTLFN+LKRNEMNKDDFIRLMRGVV
Sbjct: 181 SEQANNPLNRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNRLKRNEMNKDDFIRLMRGVV 240

Query: 241 GDQMLRLAVCQVQSQPPPSVRQLSPRMSSMGPGAPNFSDPRPFAQLHQKGMNSPGVQSYI 300
           GDQMLRLAVCQVQ+QPPPSVRQLSPRM SMGPGAPNFSDPRPF+QLHQKGMNSP VQSY+
Sbjct: 241 GDQMLRLAVCQVQAQPPPSVRQLSPRMPSMGPGAPNFSDPRPFSQLHQKGMNSPAVQSYM 300

Query: 301 PSSASQARTSSGYPAMDKNMQSLREVEQRTDGNGNQLTSSSPGTIQERERSSVPVSGLEK 360
           PSSASQ R SSGYPAMDKNMQSLREVEQRTDGN NQLTSSS GTIQERERSS+PV GLEK
Sbjct: 301 PSSASQGRGSSGYPAMDKNMQSLREVEQRTDGNANQLTSSSSGTIQERERSSIPVPGLEK 360

Query: 361 QQLHFQQKSFAMYGNSGNYHPYTGSNMNAPSLSHKPHTHEGQVKQIPQQAPSFDRLVTIN 420
           QQLHFQQKSF MYGNSGNYHPYTGSN+N  SLS KP  HEGQ KQI QQAP+FDR V+IN
Sbjct: 361 QQLHFQQKSFPMYGNSGNYHPYTGSNINTSSLSLKPQPHEGQAKQISQQAPNFDRQVSIN 420

Query: 421 DSKRVQGGNIPHLHNNLASQQNPVSWKPS-SKEQNMGPLSSMGYIKQEPSDQGSEQNKPQ 480
           D KRVQGGN+ HL NNL SQ +P  WK S SKEQN GPLSSM YIKQEPSDQ SEQNK Q
Sbjct: 421 DPKRVQGGNVSHLRNNLTSQPSP--WKSSTSKEQNTGPLSSMSYIKQEPSDQVSEQNKTQ 480

Query: 481 LSNLQGLSSVSGIQAEQVNATPGIAKDALEKQTSKMGFPTSSNVMPPTSTNAANSISSDA 540
            SNLQGLSS+  +QAEQVN TPGIAKD  EKQTSK+ FPTS+NVMP +STNAAN ISSDA
Sbjct: 481 HSNLQGLSSIPSMQAEQVNTTPGIAKDPFEKQTSKVAFPTSNNVMPQSSTNAANPISSDA 540

Query: 541 NFLHESSPALSSQVPSATTPGMQNRISQKKAVIGQKKPLETLGSSPPLSSKKQKVSGAFA 600
           N LHESS  LSSQVPSATTPGMQNR  QKK  +GQKKPLE LGSSPPLSSKKQKVSGAF+
Sbjct: 541 NSLHESSAVLSSQVPSATTPGMQNRAPQKKGAVGQKKPLEALGSSPPLSSKKQKVSGAFS 600

Query: 601 DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRATEASRKVVQEEEDRLLLQKAPLQKK 660
           DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRA+EASRKVVQEEE+RLLLQKAPLQKK
Sbjct: 601 DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRASEASRKVVQEEEERLLLQKAPLQKK 660

Query: 661 LVEIMAKCGLKGMSNDVEKCLSLCVEERLRGIISNLIRLSKQRVDSEKPRHRTFITSDVR 720
           L+EIMAK GLK MSNDVEKCLSL VEERLRGIISNLIRLSKQRVD+EKPRHRT ITSDVR
Sbjct: 661 LMEIMAKYGLKSMSNDVEKCLSLSVEERLRGIISNLIRLSKQRVDTEKPRHRTHITSDVR 720

Query: 721 QQIALVNQKAKEEWEKKQAEEEKLRKLNDPEDSQGVAGDKEKDDGRLKSVNKVNKEDDDK 780
           QQI LVNQKA+EEWEKKQAEEEKLRKLNDPED   VAGDK+KD+GR+KSV KVNKE+DDK
Sbjct: 721 QQIMLVNQKAREEWEKKQAEEEKLRKLNDPEDGSDVAGDKDKDEGRMKSV-KVNKEEDDK 780

Query: 781 MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGTDSASGSQSGKDTGRKSSSSAGR 840
           MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGG DSASGSQSGKDT RKSSS+AGR
Sbjct: 781 MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGMDSASGSQSGKDTVRKSSSAAGR 840

Query: 841 HGKDNQEGDRKGSSRKFGRNQINATQTRVARSISVKDVIAVLEREPQMSRSTTMYRLHNR 900
           HGKDNQEGDRKG+S+KFGRNQ+NA+QTRVARSISVKDVIAVL+REPQMSRSTT+YRL N+
Sbjct: 841 HGKDNQEGDRKGTSKKFGRNQMNASQTRVARSISVKDVIAVLQREPQMSRSTTIYRLFNK 900

Query: 901 VRSEETGE 908
           VRSE TGE
Sbjct: 901 VRSEATGE 904

[Close]

BLAST of Sed0017090 vs. NCBI nr
Match: XP_022952261.1 (transcription initiation factor TFIID subunit 4b isoform X1 [Cucurbita moschata] >XP_022952262.1 transcription initiation factor TFIID subunit 4b isoform X1 [Cucurbita moschata] >XP_022952263.1 transcription initiation factor TFIID subunit 4b isoform X1 [Cucurbita moschata])

HSP 1 Score: 1429.8 bits (3700), Expect = 0.0e+00
Identity = 790/908 (87.00%), Postives = 834/908 (91.85%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDMEGEGSAVSQASESDAAFTRGNNSSSG 60
           MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRD+EG+  AVSQA ESDAAF RG+N  S 
Sbjct: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDIEGDVPAVSQAPESDAAFPRGSNGPSN 60

Query: 61  LSLQTSSQNENTESNVQQDQNFRPKQEQHSSLMELERCASLPENQQQHNAAPLQASKNQP 120
           LSLQ +SQNE TES+ QQDQNFRPKQEQHSSLMELERC+SLPENQQQHNAAPLQASKNQP
Sbjct: 61  LSLQ-ASQNEKTESHAQQDQNFRPKQEQHSSLMELERCSSLPENQQQHNAAPLQASKNQP 120

Query: 121 QAGGEQGEAEQVSAQFSQTSGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQAMV 180
           QA  EQG+ EQVSAQFSQT+GLQ SEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQ MV
Sbjct: 121 QADREQGDTEQVSAQFSQTAGLQGSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQTMV 180

Query: 181 SEQANNSINRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNKLKRNEMNKDDFIRLMRGVV 240
           SEQANN +NRSKQVPFASLMPVLMPQLDKDRAMQLQTLFN+LKRNEMNKDDFIRLMRGVV
Sbjct: 181 SEQANNPLNRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNRLKRNEMNKDDFIRLMRGVV 240

Query: 241 GDQMLRLAVCQVQSQPPPSVRQLSPRMSSMGPGAPNFSDPRPFAQLHQKGMNSPGVQSYI 300
           GDQMLRLAVCQVQ+QPPPSVRQLSPRM SMGPGAPNFSDPRPF+QLHQKGMNSP VQSYI
Sbjct: 241 GDQMLRLAVCQVQAQPPPSVRQLSPRMPSMGPGAPNFSDPRPFSQLHQKGMNSPAVQSYI 300

Query: 301 PSSASQARTSSGYPAMDKNMQSLREVEQRTDGNGNQLTSSSPGTIQERERSSVPVSGLEK 360
           PSSASQ R+SSGYPAMDKNMQSLREVEQRTDGN NQLTSSS GTIQERERSS+PV GLEK
Sbjct: 301 PSSASQGRSSSGYPAMDKNMQSLREVEQRTDGNANQLTSSSSGTIQERERSSIPVPGLEK 360

Query: 361 QQLHFQQKSFAMYGNSGNYHPYTGSNMNAPSLSHKPHTHEGQVKQIPQQAPSFDRLVTIN 420
           QQLHFQQKSF MYGNSGNYHPYTGSN+N  SLS KP  HEGQ KQI QQAP+FDR VTIN
Sbjct: 361 QQLHFQQKSFPMYGNSGNYHPYTGSNINTSSLSLKPQPHEGQAKQISQQAPNFDRQVTIN 420

Query: 421 DSKRVQGGNIPHLHNNLASQQNPVSWKPS-SKEQNMGPLSSMGYIKQEPSDQGSEQNKPQ 480
           D KRVQGGN+ HL NNL SQ +P  WK S SKEQN GPLSSM YIKQEPSDQ SEQNK Q
Sbjct: 421 DPKRVQGGNVSHLRNNLTSQPSP--WKSSTSKEQNTGPLSSMSYIKQEPSDQVSEQNKTQ 480

Query: 481 LSNLQGLSSVSGIQAEQVNATPGIAKDALEKQTSKMGFPTSSNVMPPTSTNAANSISSDA 540
            SNLQGLSS+  +QAEQVN TPGIAKD  EKQTSK+ FPTS+NVMP +STNAAN ISSDA
Sbjct: 481 HSNLQGLSSIPSMQAEQVNTTPGIAKDPFEKQTSKVAFPTSNNVMPQSSTNAANPISSDA 540

Query: 541 NFLHESSPALSSQVPSATTPGMQNRISQKKAVIGQKKPLETLGSSPPLSSKKQKVSGAFA 600
           N LHESS  LSSQVPSATTPGMQNR  QKK  +GQKKPLE LGSSPPLSSKKQKVSGAF+
Sbjct: 541 NSLHESSAVLSSQVPSATTPGMQNRAPQKKGAVGQKKPLEALGSSPPLSSKKQKVSGAFS 600

Query: 601 DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRATEASRKVVQEEEDRLLLQKAPLQKK 660
           DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRA+EASRKVVQEEE+RLLLQKAPLQKK
Sbjct: 601 DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRASEASRKVVQEEEERLLLQKAPLQKK 660

Query: 661 LVEIMAKCGLKGMSNDVEKCLSLCVEERLRGIISNLIRLSKQRVDSEKPRHRTFITSDVR 720
           L+EIMAK GLK MSNDVEKCLSL VEERLRGIISNLIRLSKQRVD+EKPRHRT ITSDVR
Sbjct: 661 LMEIMAKYGLKSMSNDVEKCLSLSVEERLRGIISNLIRLSKQRVDTEKPRHRTHITSDVR 720

Query: 721 QQIALVNQKAKEEWEKKQAEEEKLRKLNDPEDSQGVAGDKEKDDGRLKSVNKVNKEDDDK 780
           QQI LVNQKA+EEWEKKQAEEEKLRKLNDPED   +AGDK+KD+GR+KSV KVNKE+DDK
Sbjct: 721 QQIMLVNQKAREEWEKKQAEEEKLRKLNDPEDGSDIAGDKDKDEGRMKSV-KVNKEEDDK 780

Query: 781 MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGTDSASGSQSGKDTGRKSSSSAGR 840
           MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGG DSASGSQSGKDT RKSSS+AGR
Sbjct: 781 MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGMDSASGSQSGKDTVRKSSSAAGR 840

Query: 841 HGKDNQEGDRKGSSRKFGRNQINATQTRVARSISVKDVIAVLEREPQMSRSTTMYRLHNR 900
           HGKDNQEGDRKG+S+KFGRNQ++A+QTRVARSISVKDVIAVL+REPQMSRSTT+YRL N+
Sbjct: 841 HGKDNQEGDRKGTSKKFGRNQMSASQTRVARSISVKDVIAVLQREPQMSRSTTIYRLFNK 900

Query: 901 VRSEETGE 908
           VRSE TGE
Sbjct: 901 VRSEATGE 904

[Close]

BLAST of Sed0017090 vs. NCBI nr
Match: XP_023554166.1 (transcription initiation factor TFIID subunit 4b isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1425.6 bits (3689), Expect = 0.0e+00
Identity = 789/908 (86.89%), Postives = 832/908 (91.63%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDMEGEGSAVSQASESDAAFTRGNNSSSG 60
           MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRD+EG+  AVSQA ESDAAF RG+N  S 
Sbjct: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDIEGDVPAVSQAPESDAAFPRGSNGPSS 60

Query: 61  LSLQTSSQNENTESNVQQDQNFRPKQEQHSSLMELERCASLPENQQQHNAAPLQASKNQP 120
           LSLQ +SQNE TES+ QQDQNFRPKQEQHSSLMELERC+SLPENQQQHNAAPLQASKNQP
Sbjct: 61  LSLQ-ASQNEKTESHAQQDQNFRPKQEQHSSLMELERCSSLPENQQQHNAAPLQASKNQP 120

Query: 121 QAGGEQGEAEQVSAQFSQTSGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQAMV 180
           QA  EQG+AEQVSAQFSQT+GLQ SEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQ MV
Sbjct: 121 QADREQGDAEQVSAQFSQTAGLQGSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQTMV 180

Query: 181 SEQANNSINRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNKLKRNEMNKDDFIRLMRGVV 240
           SEQANN +NRSKQVPFASLMPVLMPQLDKDRAMQLQTLFN+LKRNEMNKDDFIRLMRGVV
Sbjct: 181 SEQANNPLNRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNRLKRNEMNKDDFIRLMRGVV 240

Query: 241 GDQMLRLAVCQVQSQPPPSVRQLSPRMSSMGPGAPNFSDPRPFAQLHQKGMNSPGVQSYI 300
           GDQMLRLAVCQVQ+QPPPSVRQLSPRM SMGPGAPNFSDPRPF+QLHQKGMNSP VQSY+
Sbjct: 241 GDQMLRLAVCQVQAQPPPSVRQLSPRMPSMGPGAPNFSDPRPFSQLHQKGMNSPAVQSYM 300

Query: 301 PSSASQARTSSGYPAMDKNMQSLREVEQRTDGNGNQLTSSSPGTIQERERSSVPVSGLEK 360
           PSSASQ R SSGYPAMDKNMQSLREVEQRTDGN NQLTSSS GTIQERERSS+PV GLEK
Sbjct: 301 PSSASQGRGSSGYPAMDKNMQSLREVEQRTDGNANQLTSSSSGTIQERERSSIPVPGLEK 360

Query: 361 QQLHFQQKSFAMYGNSGNYHPYTGSNMNAPSLSHKPHTHEGQVKQIPQQAPSFDRLVTIN 420
           QQLHFQQKSF MYGNSGNYHPYTGSN+N  SLS KP  HEGQ KQI QQAP+FDR V+IN
Sbjct: 361 QQLHFQQKSFPMYGNSGNYHPYTGSNINTSSLSLKPQPHEGQAKQISQQAPNFDRQVSIN 420

Query: 421 DSKRVQGGNIPHLHNNLASQQNPVSWKPS-SKEQNMGPLSSMGYIKQEPSDQGSEQNKPQ 480
           D KRVQGGN+ HL NNL SQ +P  WK S SKEQN GPLSSM YIKQEPSDQ SEQNK Q
Sbjct: 421 DPKRVQGGNVSHLRNNLTSQPSP--WKSSTSKEQNTGPLSSMSYIKQEPSDQVSEQNKTQ 480

Query: 481 LSNLQGLSSVSGIQAEQVNATPGIAKDALEKQTSKMGFPTSSNVMPPTSTNAANSISSDA 540
            SNLQGLSS+  +QAEQVN TPGIAKD  EKQTSK+ FPTS+NVMP +STNAAN ISSDA
Sbjct: 481 HSNLQGLSSIPSMQAEQVNTTPGIAKDPFEKQTSKVAFPTSNNVMPQSSTNAANPISSDA 540

Query: 541 NFLHESSPALSSQVPSATTPGMQNRISQKKAVIGQKKPLETLGSSPPLSSKKQKVSGAFA 600
           N LHESS  LSSQVPSATTPGMQNR  QKK  +GQKKPLE LGSSPPLSSKKQKVSGAF+
Sbjct: 541 NSLHESSAVLSSQVPSATTPGMQNRAPQKKGAVGQKKPLEALGSSPPLSSKKQKVSGAFS 600

Query: 601 DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRATEASRKVVQEEEDRLLLQKAPLQKK 660
           DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRA+EASRKVVQEEE+RLLLQKAPLQKK
Sbjct: 601 DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRASEASRKVVQEEEERLLLQKAPLQKK 660

Query: 661 LVEIMAKCGLKGMSNDVEKCLSLCVEERLRGIISNLIRLSKQRVDSEKPRHRTFITSDVR 720
           L+EIMAK GLK MSNDVEKCLSL VEERLRGIISNLIRLSKQRVD+EKPRHRT ITSDVR
Sbjct: 661 LMEIMAKYGLKSMSNDVEKCLSLSVEERLRGIISNLIRLSKQRVDTEKPRHRTHITSDVR 720

Query: 721 QQIALVNQKAKEEWEKKQAEEEKLRKLNDPEDSQGVAGDKEKDDGRLKSVNKVNKEDDDK 780
           QQI LVNQKA+EEWEKKQAEEEKLRKLNDPED   VAGDK+KD+GR+KS   VNKE+DDK
Sbjct: 721 QQIMLVNQKAREEWEKKQAEEEKLRKLNDPEDGSDVAGDKDKDEGRMKS---VNKEEDDK 780

Query: 781 MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGTDSASGSQSGKDTGRKSSSSAGR 840
           MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGG DSASGSQSGKDT RKSSS+AGR
Sbjct: 781 MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGMDSASGSQSGKDTVRKSSSAAGR 840

Query: 841 HGKDNQEGDRKGSSRKFGRNQINATQTRVARSISVKDVIAVLEREPQMSRSTTMYRLHNR 900
           HGKDNQEGDRKG+S+KFGRNQ+NA+QTRVARSISVKDVIAVL+REPQMSRSTT+YRL N+
Sbjct: 841 HGKDNQEGDRKGTSKKFGRNQMNASQTRVARSISVKDVIAVLQREPQMSRSTTIYRLFNK 900

Query: 901 VRSEETGE 908
           VRSE TGE
Sbjct: 901 VRSEATGE 902

[Close]

BLAST of Sed0017090 vs. NCBI nr
Match: XP_022952264.1 (transcription initiation factor TFIID subunit 4b isoform X2 [Cucurbita moschata] >KAG6571841.1 Transcription initiation factor TFIID subunit 4b, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1425.6 bits (3689), Expect = 0.0e+00
Identity = 788/908 (86.78%), Postives = 832/908 (91.63%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDMEGEGSAVSQASESDAAFTRGNNSSSG 60
           MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRD+EG+  AVSQA ESDAAF RG+N  S 
Sbjct: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDIEGDVPAVSQAPESDAAFPRGSNGPSN 60

Query: 61  LSLQTSSQNENTESNVQQDQNFRPKQEQHSSLMELERCASLPENQQQHNAAPLQASKNQP 120
           LSLQ +SQNE TES+ QQDQNFRPKQEQHSSLMELERC+SLPENQQQHNAAPLQASKNQP
Sbjct: 61  LSLQ-ASQNEKTESHAQQDQNFRPKQEQHSSLMELERCSSLPENQQQHNAAPLQASKNQP 120

Query: 121 QAGGEQGEAEQVSAQFSQTSGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQAMV 180
           QA  EQG+ EQVSAQFSQT+GLQ SEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQ MV
Sbjct: 121 QADREQGDTEQVSAQFSQTAGLQGSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQTMV 180

Query: 181 SEQANNSINRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNKLKRNEMNKDDFIRLMRGVV 240
           SEQANN +NRSKQVPFASLMPVLMPQLDKDRAMQLQTLFN+LKRNEMNKDDFIRLMRGVV
Sbjct: 181 SEQANNPLNRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNRLKRNEMNKDDFIRLMRGVV 240

Query: 241 GDQMLRLAVCQVQSQPPPSVRQLSPRMSSMGPGAPNFSDPRPFAQLHQKGMNSPGVQSYI 300
           GDQMLRLAVCQVQ+QPPPSVRQLSPRM SMGPGAPNFSDPRPF+QLHQKGMNSP VQSYI
Sbjct: 241 GDQMLRLAVCQVQAQPPPSVRQLSPRMPSMGPGAPNFSDPRPFSQLHQKGMNSPAVQSYI 300

Query: 301 PSSASQARTSSGYPAMDKNMQSLREVEQRTDGNGNQLTSSSPGTIQERERSSVPVSGLEK 360
           PSSASQ R+SSGYPAMDKNMQSLREVEQRTDGN NQLTSSS GTIQERERSS+PV GLEK
Sbjct: 301 PSSASQGRSSSGYPAMDKNMQSLREVEQRTDGNANQLTSSSSGTIQERERSSIPVPGLEK 360

Query: 361 QQLHFQQKSFAMYGNSGNYHPYTGSNMNAPSLSHKPHTHEGQVKQIPQQAPSFDRLVTIN 420
           QQLHFQQKSF MYGNSGNYHPYTGSN+N  SLS KP  HEGQ KQI QQAP+FDR VTIN
Sbjct: 361 QQLHFQQKSFPMYGNSGNYHPYTGSNINTSSLSLKPQPHEGQAKQISQQAPNFDRQVTIN 420

Query: 421 DSKRVQGGNIPHLHNNLASQQNPVSWKPS-SKEQNMGPLSSMGYIKQEPSDQGSEQNKPQ 480
           D KRVQGGN+ HL NNL SQ +P  WK S SKEQN GPLSSM YIKQEPSDQ SEQNK Q
Sbjct: 421 DPKRVQGGNVSHLRNNLTSQPSP--WKSSTSKEQNTGPLSSMSYIKQEPSDQVSEQNKTQ 480

Query: 481 LSNLQGLSSVSGIQAEQVNATPGIAKDALEKQTSKMGFPTSSNVMPPTSTNAANSISSDA 540
            SNLQGLSS+  +QAEQVN TPGIAKD  EKQTSK+ FPTS+NVMP +STNAAN ISSDA
Sbjct: 481 HSNLQGLSSIPSMQAEQVNTTPGIAKDPFEKQTSKVAFPTSNNVMPQSSTNAANPISSDA 540

Query: 541 NFLHESSPALSSQVPSATTPGMQNRISQKKAVIGQKKPLETLGSSPPLSSKKQKVSGAFA 600
           N LHESS  LSSQVPSATTPGMQNR  QKK  +GQKKPLE LGSSPPLSSKKQKVSGAF+
Sbjct: 541 NSLHESSAVLSSQVPSATTPGMQNRAPQKKGAVGQKKPLEALGSSPPLSSKKQKVSGAFS 600

Query: 601 DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRATEASRKVVQEEEDRLLLQKAPLQKK 660
           DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRA+EASRKVVQEEE+RLLLQKAPLQKK
Sbjct: 601 DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRASEASRKVVQEEEERLLLQKAPLQKK 660

Query: 661 LVEIMAKCGLKGMSNDVEKCLSLCVEERLRGIISNLIRLSKQRVDSEKPRHRTFITSDVR 720
           L+EIMAK GLK MSNDVEKCLSL VEERLRGIISNLIRLSKQRVD+EKPRHRT ITSDVR
Sbjct: 661 LMEIMAKYGLKSMSNDVEKCLSLSVEERLRGIISNLIRLSKQRVDTEKPRHRTHITSDVR 720

Query: 721 QQIALVNQKAKEEWEKKQAEEEKLRKLNDPEDSQGVAGDKEKDDGRLKSVNKVNKEDDDK 780
           QQI LVNQKA+EEWEKKQAEEEKLRKLNDPED   +AGDK+KD+GR+KS   VNKE+DDK
Sbjct: 721 QQIMLVNQKAREEWEKKQAEEEKLRKLNDPEDGSDIAGDKDKDEGRMKS---VNKEEDDK 780

Query: 781 MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGTDSASGSQSGKDTGRKSSSSAGR 840
           MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGG DSASGSQSGKDT RKSSS+AGR
Sbjct: 781 MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGMDSASGSQSGKDTVRKSSSAAGR 840

Query: 841 HGKDNQEGDRKGSSRKFGRNQINATQTRVARSISVKDVIAVLEREPQMSRSTTMYRLHNR 900
           HGKDNQEGDRKG+S+KFGRNQ++A+QTRVARSISVKDVIAVL+REPQMSRSTT+YRL N+
Sbjct: 841 HGKDNQEGDRKGTSKKFGRNQMSASQTRVARSISVKDVIAVLQREPQMSRSTTIYRLFNK 900

Query: 901 VRSEETGE 908
           VRSE TGE
Sbjct: 901 VRSEATGE 902

[Close]

BLAST of Sed0017090 vs. ExPASy Swiss-Prot
Match: F4K4L7 (Transcription initiation factor TFIID subunit 4b OS=Arabidopsis thaliana OX=3702 GN=TAF4B PE=1 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 1.2e-164
Identity = 442/964 (45.85%), Postives = 563/964 (58.40%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDMEGEGSAVSQASESDAAFTRGNNSSSG 60
           MDPSI KLLE+DEDE+MHSGA V+AFQAALNRD+EG     S  +        GNN S  
Sbjct: 1   MDPSIFKLLEEDEDESMHSGADVDAFQAALNRDIEG-----SMTTSIPHVTNPGNNHS-- 60

Query: 61  LSLQTSSQNENTESNVQQDQNFRPKQEQHS--SLMELERCASLPENQQQHN---AAPLQA 120
                S Q  +T  N   D N    Q QHS  S    E+  S  ENQ QH+   A     
Sbjct: 61  -----SRQQFSTWKNGIGDSNIN-VQTQHSLESTQMKEQEGSTLENQHQHDLKRANEPHL 120

Query: 121 SKNQPQAGGEQGEAEQVSAQFSQTSGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSN 180
             NQPQ     G+  +  +Q  Q++GL +SEK P   N+S+R  N+++ESQY+KLQKMS+
Sbjct: 121 QHNQPQDLHRAGQLWENPSQVPQSTGLPISEKNP-TGNESDRSHNQESESQYMKLQKMSS 180

Query: 181 QQAM-----VSEQANNSINRS-KQVPFASLMPVLMPQLDKDRAMQLQTLFNKLKRNEMNK 240
           QQA      V+    N INR+ KQVPFA+L+P LM QLDKDRA+QL+TL+ +LK+NE+ K
Sbjct: 181 QQARGVEPPVNPMNVNPINRNPKQVPFAALLPTLMNQLDKDRALQLRTLYARLKKNEIPK 240

Query: 241 DDFIRLMRGVVGDQMLRLAVCQVQSQPPPSVRQLSPRMSSMGPGAPNFSDPRPFAQLHQK 300
           + F R M+ +VGDQMLR+AV ++Q        Q++     +G  AP+          +QK
Sbjct: 241 EGFTRHMKDIVGDQMLRMAVSKLQ--------QVNYNQGKIGIQAPSTEIN------NQK 300

Query: 301 GMNSPGVQSYIPSSASQARTSSGYPAMDKNMQSLREVEQRTDGNGNQLTSSSPGTIQERE 360
             + P                             R V        NQL SS+ GT+    
Sbjct: 301 SQSDP-----------------------------RAVHL------NQLPSSASGTL---- 360

Query: 361 RSSVPVSGLEKQQLHFQQ---KSFAMYGNSGNYHPYTGSNMNAPSLSHKPHTHEGQVKQI 420
            SSVPV GL K   H  Q    SF MY  SG++H + G N NA   + +PH H+  ++ +
Sbjct: 361 GSSVPVQGLTKHPQHQMQHPPSSFPMYTTSGSFHSFPGPNTNASGSTLRPHLHDSHMRHV 420

Query: 421 --------------PQQA------PSFDRLVTINDSKRVQGGNIPHLHNNLASQQNPVSW 480
                         PQ        P F+R  ++ND  RVQGG   H  N   S   P++ 
Sbjct: 421 AHNQPMGSTGLGGPPQSTTNMMTMPKFERPSSVNDPSRVQGGATSHFQN---SSSLPLNS 480

Query: 481 KPSSKEQNMGPLSSMGYIKQEPSDQGSEQNKPQLSNLQGLSSVSGIQAEQVNATPGIAKD 540
            P       G  SS+ ++KQE  DQ  E+N                     NA    + +
Sbjct: 481 AP-------GQGSSVSHVKQESVDQSFEKN---------------------NAASMTSNE 540

Query: 541 ALEKQTSKMGFPTSSNVMPPTSTNAANSISSDANFLHESSPALSSQVPSATTPGMQN-RI 600
            LEK++S+M   T +N+ P +S + + +   DA      S  ++S+ P  T+ G  N R+
Sbjct: 541 DLEKESSRMVLSTPNNMAPASSVSPSMTTQLDA------STTMNSRGPLGTSQGGANARM 600

Query: 601 SQKKAVIGQKKPLETLGSSPPLSSKKQKVSGAFADQSIEQLNDVTAVSGVNIREEEEQLF 660
             KK  +GQKKPLETLGSSPP  SKKQKV+G   DQSIEQLNDVTAVSGVN+REEEEQLF
Sbjct: 601 PPKKPSVGQKKPLETLGSSPPPPSKKQKVAGNSMDQSIEQLNDVTAVSGVNLREEEEQLF 660

Query: 661 SSAKEDSRATEASRKVVQEEEDRLLLQKAPLQKKLVEIMAKCGLKGMSNDVEKCLSLCVE 720
           S AKED R +EASR+VV EEE+RL+LQK PLQ+KL EIMAK GLK +SNDVE+CLSLCVE
Sbjct: 661 SGAKEDGRVSEASRRVVHEEEERLILQKNPLQRKLAEIMAKAGLKQISNDVERCLSLCVE 720

Query: 721 ERLRGIISNLIRLSKQRVDSEKPRHRTFITSDVRQQIALVNQKAKEEWEKKQAEEEKLRK 780
           ER+RG++S++IRLSKQRVD+EK RHRTFITSD+R QI  +NQK KEEWEKKQAE EKL+K
Sbjct: 721 ERMRGLLSHIIRLSKQRVDAEKSRHRTFITSDIRLQINEMNQKVKEEWEKKQAEAEKLKK 780

Query: 781 LNDPEDSQ-GVAGDKEKDDGRLKSVNKVNKEDDDKMRTTAANVAARAAVGGDDMLSKWQL 840
            ++ E+   GV  +K+K+D R K V K NKEDDDKMRTTAANVAARAAVGGDD   KWQL
Sbjct: 781 PSESEEGDGGVDSEKDKEDNRSKGV-KGNKEDDDKMRTTAANVAARAAVGGDDAFLKWQL 840

Query: 841 MAEQARQKREGGTDSASGSQSGKDTGRKSSSSAGRHGKDNQEGDRKGS------------ 897
           MAE ARQK        S S++GKD  +K++S  G++ KD Q+G R+ S            
Sbjct: 841 MAE-ARQK--------SVSEAGKDGNQKTTSGGGKNSKDRQDGGRRFSGTESSCGVGIVY 850

[Close]

BLAST of Sed0017090 vs. ExPASy Swiss-Prot
Match: Q6SJR1 (Transcription initiation factor TFIID subunit 4 OS=Arabidopsis thaliana OX=3702 GN=TAF4 PE=1 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 4.0e-101
Identity = 292/779 (37.48%), Postives = 425/779 (54.56%), Query Frame = 0


Query: 152 VNDSNRMQNRDNESQYLKLQKMSNQQAMVSEQANNSINRSKQVPFASLMPVLMPQLDKD- 211
           +N++   ++   + +Y+KLQKMS+++    E+  + +N + ++  A +  +L   +D   
Sbjct: 43  INNTTGNESEKPQPRYMKLQKMSSKETPWVEKTVDPVNHNLRL--ARVTDLLRTVVDHQP 102

Query: 212 -RAMQLQTLFNKLKRNEMNKDDFIRLMRGVVGDQMLRLAVCQVQSQPPPSVRQLSPRMSS 271
            +      L  KLKR E+  ++F+R +R +VGDQ++R  + Q+    P ++         
Sbjct: 103 GKKTHCLNLHYKLKRKELTMEEFMRQLRDLVGDQIIRSVISQLPQLKPGNM--------- 162

Query: 272 MGPGAPNFSDPRPFAQLHQKGMNSPGVQSYIPSSASQARTSSGYPAMDKNMQSLREVEQR 331
                               G+  PG               S +  + K+ +   +    
Sbjct: 163 --------------------GIKVPG--------------RSNHDKVSKSAEFTAQESDP 222

Query: 332 TDGNGNQLTSSSPGTIQERERSSVPVSGLEK---QQLHFQQKSFAMYGNSGNYHPYTGSN 391
            + + NQL+S++ GT+     SS  V GL K   Q +     SF M   SG+ +PY G+N
Sbjct: 223 REVHVNQLSSTTSGTL----NSSTTVQGLNKHPEQHMQLPSSSFHMDTKSGSLNPYPGTN 282

Query: 392 MNAPSLSHKPHTHEGQVKQIPQQ------------------APSFDRLVTINDSKRVQGG 451
           + +P  S +    + Q ++  Q                    P F+R   +N   RVQ G
Sbjct: 283 VTSPGSSSRAKLPDFQHRENNQNVGIASVGGPTKSTINMTTVPKFERPTFVNGPSRVQDG 342

Query: 452 NIPHLHNNLASQQNPVSWKPS-SKEQNMGPLSSMGYIKQEPSDQGSEQ-NKPQLSNLQGL 511
            I     N +       W+ S +K+  +GP SS+ +++ +  DQ  EQ +KP+    QG 
Sbjct: 343 PISDFPKNSSFPLYSAPWQGSVTKDHTVGPSSSVIHVEHKLIDQSFEQAHKPRYLVQQG- 402

Query: 512 SSVSGIQAEQVNATPGIAKDALEKQTSKMGFPTSSNVMPPTSTNAANSISSDANFLHESS 571
             V+ +  +Q NA P  + D LEKQ+SKMG          TST +A+S+        +SS
Sbjct: 403 --VTNVPLKQKNAIPISSNDDLEKQSSKMGL--------FTSTTSASSVFPSMTTQLDSS 462

Query: 572 PALSSQVPSATTPGMQN-RISQKKAVIGQKKPLETLGSSPPLSSKKQKVSGAFADQSIEQ 631
             ++   PS T P + N  ++ K   +GQKKPLE LGSS P S KKQK+ G  +D+SIE+
Sbjct: 463 TMVNMPAPSETIPKIANVTVTPKMPSVGQKKPLEALGSSLPPSRKKQKICGTSSDESIEK 522

Query: 632 LNDVTAVSGVNIREEEEQLFSSA-KEDSRATEASRKVVQEEEDRLLLQKAPLQKKLVEIM 691
            NDVTAVSG+N+REEE+QL  S  K++ R ++A R++V  EE+R LLQK PLQ+KL EIM
Sbjct: 523 FNDVTAVSGINLREEEKQLLDSGPKKNDRVSKAYRRLVHGEEERTLLQKIPLQRKLTEIM 582

Query: 692 AKCGLKGMSNDVEKCLSLCVEERLRGIISNLIRLSKQRVDSEKPRHRTFITSDVRQQIAL 751
            K GLK + +DVE+CLSLCVEER+RG++ N+IR+SKQR D+EK R+RTFITSD+R++I  
Sbjct: 583 GKSGLKHIDHDVERCLSLCVEERMRGLLFNIIRISKQRTDAEKCRNRTFITSDIRKEINE 642

Query: 752 VNQKAKEEWEKKQAEEEKLRKLNDPEDSQGVAGDKEKDDGRLKSVNKVNKEDDDKMRTTA 811
           +NQK KEEWEKK + EEK ++            D EK+D R   V K NK+D+DK R  A
Sbjct: 643 MNQKVKEEWEKKHSGEEKNKE-----------NDTEKEDQRSNEV-KANKKDEDKERAKA 702

Query: 812 ANVAARAAVGGDDMLSKWQLMAEQARQKREGGTDSASGSQSGKDTGRKSSSSAGRHGKDN 871
           ANVA RAAVGGDD  SKW+LMAE ARQ                    +SS   GR+ K  
Sbjct: 703 ANVAVRAAVGGDDRFSKWKLMAE-ARQ--------------------RSSPGPGRNSK-- 719

Query: 872 QEGDRKGSSRKFGRNQINATQTRVARSISVKDVIAVLEREPQMSRSTTMYRLHNRVRSE 904
               +     +FG+NQ      +V RSISVKDVIAV+E+EPQMSRST +YR++NR+ S+
Sbjct: 763 ----KLSGGTQFGKNQ---GLPKVVRSISVKDVIAVVEKEPQMSRSTLLYRVYNRICSD 719

[Close]

BLAST of Sed0017090 vs. ExPASy Swiss-Prot
Match: Q92750 (Transcription initiation factor TFIID subunit 4B OS=Homo sapiens OX=9606 GN=TAF4B PE=1 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 2.4e-05
Identity = 52/217 (23.96%), Postives = 114/217 (52.53%), Query Frame = 0


Query: 580 TLGSSPPLSSK-KQKVSGAFADQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRATEAS 639
           +L +SP   ++ K+ V+  F D+  + +NDVT+++GVN+ EE   + ++       +E  
Sbjct: 591 SLQASPTQKNRIKENVTSCFRDE--DDINDVTSMAGVNLNEENACILAT------NSELV 650

Query: 640 RKVVQEEEDRLLLQKAPLQKKLVEIMAKCGLKGMSNDVEKCLSLCVEERLRGIISNLIRL 699
             ++Q  +D   L    LQK++++I  K  +  +++D    +S   +ERLRG++  L  +
Sbjct: 651 GTLIQSCKDEPFLFIGALQKRILDIGKKHDITELNSDAVNLISQATQERLRGLLEKLTAI 710

Query: 700 SKQRVDSEKPRHRTFITSDVRQQIALVNQKAKEEWEKKQAEEEKLRKLNDPEDSQGVAGD 759
           ++ R+ + K      + SD R Q+  + +  + E ++K  EE ++      + ++  +  
Sbjct: 711 AQHRMTTYKASENYILCSDTRSQLKFLEKLDQLEKQRKDLEEREMLL----KAAKSRSNK 770

Query: 760 KEKDDGRLK-SVNKVNKEDDDKMRTTAANVAARAAVG 795
           ++ +  RLK    ++ + +  +++   AN+ A AA+G
Sbjct: 771 EDPEQLRLKQKAKELQQLELAQIQHRDANLTALAAIG 795

[Close]

BLAST of Sed0017090 vs. ExPASy Swiss-Prot
Match: O00268 (Transcription initiation factor TFIID subunit 4 OS=Homo sapiens OX=9606 GN=TAF4 PE=1 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 3.2e-05
Identity = 83/332 (25.00%), Postives = 150/332 (45.18%), Query Frame = 0


Query: 568  KKAVIGQKKPLETLGSSPPLSSK---KQKVSGAFADQSIEQLNDVTAVSGVNIREEEEQL 627
            K AV+   K L  + +    + K   K+   G+F D   + +NDV +++GVN+ EE  ++
Sbjct: 795  KPAVLPGTKALSAVSAQAAAAQKNKLKEPGGGSFRDD--DDINDVASMAGVNLSEESARI 854

Query: 628  FSSAKEDSRATEASRKVVQEEEDRLLLQKAPLQKKLVEIMAKCGLKGMSNDVEKCLSLCV 687
             ++  E       S K      D   L +APLQ++++EI  K G+  +  DV   +S   
Sbjct: 855  LATNSELVGTLTRSCK------DETFLLQAPLQRRILEIGKKHGITELHPDVVSYVSHAT 914

Query: 688  EERLRGIISNLIRLSKQRVDSEKPRHRTFITSDVRQQIALVNQKAKEEWEKKQAEEEKLR 747
            ++RL+ ++  +   ++Q+  S K   R    SDVR Q+    Q  + E ++K  +E ++ 
Sbjct: 915  QQRLQNLVEKISETAQQKNFSYKDDDRYEQASDVRAQLKFFEQLDQIEKQRKDEQEREIL 974

Query: 748  KLNDPEDSQGVAGDKEKDDGRLK-SVNKVNKEDDDKMRTTAANVAARAAVGGDDMLSKWQ 807
                   ++  +  ++ +  RLK    ++ +++  +MR   AN+ A AA+G         
Sbjct: 975  M----RAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDANLTALAAIG--------- 1034

Query: 808  LMAEQARQKREGGTDSASGSQSGKDTGRKSSSSAGRHGKDNQEGDRKGSSRKFGRNQINA 867
                  R+KR+           G   G     S+G            G+ R+F R +I  
Sbjct: 1035 -----PRKKRKVDCPGPGSGAEGSGPGSVVPGSSG-----------VGTPRQFTRQRI-- 1081

Query: 868  TQTRVARSISVKDVIAVLEREPQMSRSTTMYR 896
              TRV    +++D+I  LE E + S S  +Y+
Sbjct: 1095 --TRV----NLRDLIFCLENERETSHSLLLYK 1081

[Close]

BLAST of Sed0017090 vs. ExPASy TrEMBL
Match: A0A6J1DH47 (transcription initiation factor TFIID subunit 4b OS=Momordica charantia OX=3673 GN=LOC111020828 PE=3 SV=1)

HSP 1 Score: 1451.8 bits (3757), Expect = 0.0e+00
Identity = 796/908 (87.67%), Postives = 840/908 (92.51%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDMEGEGSAVSQASESDAAFTRGNNSSSG 60
           MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRD+EG+  A SQ SESDAAF RG+NS SG
Sbjct: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDIEGDVPAPSQTSESDAAFPRGSNSISG 60

Query: 61  LSLQTSSQNENTESNVQQDQNFRPKQEQHSSLMELERCASLPENQQQHNAAPLQASKNQP 120
           LSLQ SSQNENTES+VQQDQNF  KQEQHSSLMELERC S PENQQ+HNA  LQ+SKNQP
Sbjct: 61  LSLQASSQNENTESHVQQDQNFLLKQEQHSSLMELERCTSAPENQQKHNAPLLQSSKNQP 120

Query: 121 QAGGEQGEAEQVSAQFSQTSGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQAMV 180
           QA  EQGE EQV  QFSQT+GLQ SEKAPILVNDS+RM NRDNESQYLKLQKMSNQQAMV
Sbjct: 121 QADHEQGEVEQVPVQFSQTAGLQGSEKAPILVNDSSRMPNRDNESQYLKLQKMSNQQAMV 180

Query: 181 SEQANNSINRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNKLKRNEMNKDDFIRLMRGVV 240
           SEQA+NS+NRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNKLKRNEMNKDDFIRLMRGVV
Sbjct: 181 SEQASNSVNRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNKLKRNEMNKDDFIRLMRGVV 240

Query: 241 GDQMLRLAVCQVQSQPPPSVRQLSPRMSSMGPGAPNFSDPRPFAQLHQKGMNSPGVQSYI 300
           GDQMLRLAVCQVQSQPPPSVRQLSPRM SMGPGA NFSDPRPFAQLHQKGMNSPGVQSYI
Sbjct: 241 GDQMLRLAVCQVQSQPPPSVRQLSPRMPSMGPGASNFSDPRPFAQLHQKGMNSPGVQSYI 300

Query: 301 PSSASQARTSSGYPAMDKNMQSLREVEQRTDGNGNQLTSSSPGTIQERERSSVPVSGLEK 360
           PS ASQ R SSGYP MDKNMQSLREVEQRTDGNGNQLTSSS GTIQERERSSVPV GLEK
Sbjct: 301 PSPASQGRGSSGYPVMDKNMQSLREVEQRTDGNGNQLTSSSTGTIQERERSSVPVPGLEK 360

Query: 361 QQLHFQQKSFAMYGNSGNYHPYTGSNMNAPSLSHKPHTHEGQVKQIPQQAPSFDRLVTIN 420
           QQLHFQQKSFAMYG SG+YH YTGSN+NA SLS KP  HEGQVKQI QQAP+FDR VTIN
Sbjct: 361 QQLHFQQKSFAMYGTSGSYHQYTGSNINASSLSLKPQPHEGQVKQISQQAPNFDRQVTIN 420

Query: 421 DSKRVQGGNIPHLHNNLASQQNPVSWK-PSSKEQNMGPLSSMGYIKQEPSDQGSEQNKPQ 480
           DSKRVQGGN+PHLHNNL SQQNPVSWK  +SKEQN GPLSSM YIKQEPSDQ +EQNK Q
Sbjct: 421 DSKRVQGGNVPHLHNNLTSQQNPVSWKSTTSKEQNTGPLSSMSYIKQEPSDQVAEQNKTQ 480

Query: 481 LSNLQGLSSVSGIQAEQVNATPGIAKDALEKQTSKMGFPTSSNVMPPTSTNAANSISSDA 540
           LSNLQGLSS+S +QAEQVN TPGI+KD+ EKQ+SKMGFPTS+NV+PPTSTN ANSISSDA
Sbjct: 481 LSNLQGLSSISSVQAEQVNTTPGISKDSFEKQSSKMGFPTSNNVIPPTSTNVANSISSDA 540

Query: 541 NFLHESSPALSSQVPSATTPGMQNRISQKKAVIGQKKPLETLGSSPPLSSKKQKVSGAFA 600
             +H+SS  L SQVPSATTPG+QNR  QKKA +GQKKPLE LGSSPPLSSKKQKVSGAF+
Sbjct: 541 VSVHDSSAMLGSQVPSATTPGLQNRTLQKKATVGQKKPLEALGSSPPLSSKKQKVSGAFS 600

Query: 601 DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRATEASRKVVQEEEDRLLLQKAPLQKK 660
           DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRA+EASR+VVQEEE+RL+LQKAPLQKK
Sbjct: 601 DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLILQKAPLQKK 660

Query: 661 LVEIMAKCGLKGMSNDVEKCLSLCVEERLRGIISNLIRLSKQRVDSEKPRHRTFITSDVR 720
           LVEIMAKCGLKGMSNDVEKCLSLCVEERLRGIISNLIRLSKQRVDSEKPRHRT ITSDVR
Sbjct: 661 LVEIMAKCGLKGMSNDVEKCLSLCVEERLRGIISNLIRLSKQRVDSEKPRHRTLITSDVR 720

Query: 721 QQIALVNQKAKEEWEKKQAEEEKLRKLNDPEDSQGVAGDKEKDDGRLKSVNKVNKEDDDK 780
           QQI LVNQKA+EEWEKKQAEEEKLRKLNDPED  GVAGDKEKD+ RLKSV KVNKE+DDK
Sbjct: 721 QQITLVNQKAREEWEKKQAEEEKLRKLNDPEDGSGVAGDKEKDESRLKSV-KVNKEEDDK 780

Query: 781 MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGTDSASGSQSGKDTGRKSSSSAGR 840
           MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGG DSASGSQSGKD  RKSSS+AGR
Sbjct: 781 MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGIDSASGSQSGKDAARKSSSAAGR 840

Query: 841 HGKDNQEGDRKGSSRKFGRNQINATQTRVARSISVKDVIAVLEREPQMSRSTTMYRLHNR 900
           HGKDNQE DRKG+SRKFGRNQ+++TQTRVARSISVKDVIAVL+REPQMSRSTT+YRL+NR
Sbjct: 841 HGKDNQEADRKGTSRKFGRNQLSSTQTRVARSISVKDVIAVLQREPQMSRSTTIYRLYNR 900

Query: 901 VRSEETGE 908
           + SE TGE
Sbjct: 901 IHSEATGE 907

[Close]

BLAST of Sed0017090 vs. ExPASy TrEMBL
Match: A0A6J1GJW9 (transcription initiation factor TFIID subunit 4b isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454994 PE=3 SV=1)

HSP 1 Score: 1429.8 bits (3700), Expect = 0.0e+00
Identity = 790/908 (87.00%), Postives = 834/908 (91.85%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDMEGEGSAVSQASESDAAFTRGNNSSSG 60
           MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRD+EG+  AVSQA ESDAAF RG+N  S 
Sbjct: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDIEGDVPAVSQAPESDAAFPRGSNGPSN 60

Query: 61  LSLQTSSQNENTESNVQQDQNFRPKQEQHSSLMELERCASLPENQQQHNAAPLQASKNQP 120
           LSLQ +SQNE TES+ QQDQNFRPKQEQHSSLMELERC+SLPENQQQHNAAPLQASKNQP
Sbjct: 61  LSLQ-ASQNEKTESHAQQDQNFRPKQEQHSSLMELERCSSLPENQQQHNAAPLQASKNQP 120

Query: 121 QAGGEQGEAEQVSAQFSQTSGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQAMV 180
           QA  EQG+ EQVSAQFSQT+GLQ SEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQ MV
Sbjct: 121 QADREQGDTEQVSAQFSQTAGLQGSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQTMV 180

Query: 181 SEQANNSINRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNKLKRNEMNKDDFIRLMRGVV 240
           SEQANN +NRSKQVPFASLMPVLMPQLDKDRAMQLQTLFN+LKRNEMNKDDFIRLMRGVV
Sbjct: 181 SEQANNPLNRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNRLKRNEMNKDDFIRLMRGVV 240

Query: 241 GDQMLRLAVCQVQSQPPPSVRQLSPRMSSMGPGAPNFSDPRPFAQLHQKGMNSPGVQSYI 300
           GDQMLRLAVCQVQ+QPPPSVRQLSPRM SMGPGAPNFSDPRPF+QLHQKGMNSP VQSYI
Sbjct: 241 GDQMLRLAVCQVQAQPPPSVRQLSPRMPSMGPGAPNFSDPRPFSQLHQKGMNSPAVQSYI 300

Query: 301 PSSASQARTSSGYPAMDKNMQSLREVEQRTDGNGNQLTSSSPGTIQERERSSVPVSGLEK 360
           PSSASQ R+SSGYPAMDKNMQSLREVEQRTDGN NQLTSSS GTIQERERSS+PV GLEK
Sbjct: 301 PSSASQGRSSSGYPAMDKNMQSLREVEQRTDGNANQLTSSSSGTIQERERSSIPVPGLEK 360

Query: 361 QQLHFQQKSFAMYGNSGNYHPYTGSNMNAPSLSHKPHTHEGQVKQIPQQAPSFDRLVTIN 420
           QQLHFQQKSF MYGNSGNYHPYTGSN+N  SLS KP  HEGQ KQI QQAP+FDR VTIN
Sbjct: 361 QQLHFQQKSFPMYGNSGNYHPYTGSNINTSSLSLKPQPHEGQAKQISQQAPNFDRQVTIN 420

Query: 421 DSKRVQGGNIPHLHNNLASQQNPVSWKPS-SKEQNMGPLSSMGYIKQEPSDQGSEQNKPQ 480
           D KRVQGGN+ HL NNL SQ +P  WK S SKEQN GPLSSM YIKQEPSDQ SEQNK Q
Sbjct: 421 DPKRVQGGNVSHLRNNLTSQPSP--WKSSTSKEQNTGPLSSMSYIKQEPSDQVSEQNKTQ 480

Query: 481 LSNLQGLSSVSGIQAEQVNATPGIAKDALEKQTSKMGFPTSSNVMPPTSTNAANSISSDA 540
            SNLQGLSS+  +QAEQVN TPGIAKD  EKQTSK+ FPTS+NVMP +STNAAN ISSDA
Sbjct: 481 HSNLQGLSSIPSMQAEQVNTTPGIAKDPFEKQTSKVAFPTSNNVMPQSSTNAANPISSDA 540

Query: 541 NFLHESSPALSSQVPSATTPGMQNRISQKKAVIGQKKPLETLGSSPPLSSKKQKVSGAFA 600
           N LHESS  LSSQVPSATTPGMQNR  QKK  +GQKKPLE LGSSPPLSSKKQKVSGAF+
Sbjct: 541 NSLHESSAVLSSQVPSATTPGMQNRAPQKKGAVGQKKPLEALGSSPPLSSKKQKVSGAFS 600

Query: 601 DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRATEASRKVVQEEEDRLLLQKAPLQKK 660
           DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRA+EASRKVVQEEE+RLLLQKAPLQKK
Sbjct: 601 DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRASEASRKVVQEEEERLLLQKAPLQKK 660

Query: 661 LVEIMAKCGLKGMSNDVEKCLSLCVEERLRGIISNLIRLSKQRVDSEKPRHRTFITSDVR 720
           L+EIMAK GLK MSNDVEKCLSL VEERLRGIISNLIRLSKQRVD+EKPRHRT ITSDVR
Sbjct: 661 LMEIMAKYGLKSMSNDVEKCLSLSVEERLRGIISNLIRLSKQRVDTEKPRHRTHITSDVR 720

Query: 721 QQIALVNQKAKEEWEKKQAEEEKLRKLNDPEDSQGVAGDKEKDDGRLKSVNKVNKEDDDK 780
           QQI LVNQKA+EEWEKKQAEEEKLRKLNDPED   +AGDK+KD+GR+KSV KVNKE+DDK
Sbjct: 721 QQIMLVNQKAREEWEKKQAEEEKLRKLNDPEDGSDIAGDKDKDEGRMKSV-KVNKEEDDK 780

Query: 781 MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGTDSASGSQSGKDTGRKSSSSAGR 840
           MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGG DSASGSQSGKDT RKSSS+AGR
Sbjct: 781 MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGMDSASGSQSGKDTVRKSSSAAGR 840

Query: 841 HGKDNQEGDRKGSSRKFGRNQINATQTRVARSISVKDVIAVLEREPQMSRSTTMYRLHNR 900
           HGKDNQEGDRKG+S+KFGRNQ++A+QTRVARSISVKDVIAVL+REPQMSRSTT+YRL N+
Sbjct: 841 HGKDNQEGDRKGTSKKFGRNQMSASQTRVARSISVKDVIAVLQREPQMSRSTTIYRLFNK 900

Query: 901 VRSEETGE 908
           VRSE TGE
Sbjct: 901 VRSEATGE 904

[Close]

BLAST of Sed0017090 vs. ExPASy TrEMBL
Match: A0A6J1GL68 (transcription initiation factor TFIID subunit 4b isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454994 PE=3 SV=1)

HSP 1 Score: 1425.6 bits (3689), Expect = 0.0e+00
Identity = 788/908 (86.78%), Postives = 832/908 (91.63%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDMEGEGSAVSQASESDAAFTRGNNSSSG 60
           MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRD+EG+  AVSQA ESDAAF RG+N  S 
Sbjct: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDIEGDVPAVSQAPESDAAFPRGSNGPSN 60

Query: 61  LSLQTSSQNENTESNVQQDQNFRPKQEQHSSLMELERCASLPENQQQHNAAPLQASKNQP 120
           LSLQ +SQNE TES+ QQDQNFRPKQEQHSSLMELERC+SLPENQQQHNAAPLQASKNQP
Sbjct: 61  LSLQ-ASQNEKTESHAQQDQNFRPKQEQHSSLMELERCSSLPENQQQHNAAPLQASKNQP 120

Query: 121 QAGGEQGEAEQVSAQFSQTSGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQAMV 180
           QA  EQG+ EQVSAQFSQT+GLQ SEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQ MV
Sbjct: 121 QADREQGDTEQVSAQFSQTAGLQGSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQTMV 180

Query: 181 SEQANNSINRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNKLKRNEMNKDDFIRLMRGVV 240
           SEQANN +NRSKQVPFASLMPVLMPQLDKDRAMQLQTLFN+LKRNEMNKDDFIRLMRGVV
Sbjct: 181 SEQANNPLNRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNRLKRNEMNKDDFIRLMRGVV 240

Query: 241 GDQMLRLAVCQVQSQPPPSVRQLSPRMSSMGPGAPNFSDPRPFAQLHQKGMNSPGVQSYI 300
           GDQMLRLAVCQVQ+QPPPSVRQLSPRM SMGPGAPNFSDPRPF+QLHQKGMNSP VQSYI
Sbjct: 241 GDQMLRLAVCQVQAQPPPSVRQLSPRMPSMGPGAPNFSDPRPFSQLHQKGMNSPAVQSYI 300

Query: 301 PSSASQARTSSGYPAMDKNMQSLREVEQRTDGNGNQLTSSSPGTIQERERSSVPVSGLEK 360
           PSSASQ R+SSGYPAMDKNMQSLREVEQRTDGN NQLTSSS GTIQERERSS+PV GLEK
Sbjct: 301 PSSASQGRSSSGYPAMDKNMQSLREVEQRTDGNANQLTSSSSGTIQERERSSIPVPGLEK 360

Query: 361 QQLHFQQKSFAMYGNSGNYHPYTGSNMNAPSLSHKPHTHEGQVKQIPQQAPSFDRLVTIN 420
           QQLHFQQKSF MYGNSGNYHPYTGSN+N  SLS KP  HEGQ KQI QQAP+FDR VTIN
Sbjct: 361 QQLHFQQKSFPMYGNSGNYHPYTGSNINTSSLSLKPQPHEGQAKQISQQAPNFDRQVTIN 420

Query: 421 DSKRVQGGNIPHLHNNLASQQNPVSWKPS-SKEQNMGPLSSMGYIKQEPSDQGSEQNKPQ 480
           D KRVQGGN+ HL NNL SQ +P  WK S SKEQN GPLSSM YIKQEPSDQ SEQNK Q
Sbjct: 421 DPKRVQGGNVSHLRNNLTSQPSP--WKSSTSKEQNTGPLSSMSYIKQEPSDQVSEQNKTQ 480

Query: 481 LSNLQGLSSVSGIQAEQVNATPGIAKDALEKQTSKMGFPTSSNVMPPTSTNAANSISSDA 540
            SNLQGLSS+  +QAEQVN TPGIAKD  EKQTSK+ FPTS+NVMP +STNAAN ISSDA
Sbjct: 481 HSNLQGLSSIPSMQAEQVNTTPGIAKDPFEKQTSKVAFPTSNNVMPQSSTNAANPISSDA 540

Query: 541 NFLHESSPALSSQVPSATTPGMQNRISQKKAVIGQKKPLETLGSSPPLSSKKQKVSGAFA 600
           N LHESS  LSSQVPSATTPGMQNR  QKK  +GQKKPLE LGSSPPLSSKKQKVSGAF+
Sbjct: 541 NSLHESSAVLSSQVPSATTPGMQNRAPQKKGAVGQKKPLEALGSSPPLSSKKQKVSGAFS 600

Query: 601 DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRATEASRKVVQEEEDRLLLQKAPLQKK 660
           DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRA+EASRKVVQEEE+RLLLQKAPLQKK
Sbjct: 601 DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRASEASRKVVQEEEERLLLQKAPLQKK 660

Query: 661 LVEIMAKCGLKGMSNDVEKCLSLCVEERLRGIISNLIRLSKQRVDSEKPRHRTFITSDVR 720
           L+EIMAK GLK MSNDVEKCLSL VEERLRGIISNLIRLSKQRVD+EKPRHRT ITSDVR
Sbjct: 661 LMEIMAKYGLKSMSNDVEKCLSLSVEERLRGIISNLIRLSKQRVDTEKPRHRTHITSDVR 720

Query: 721 QQIALVNQKAKEEWEKKQAEEEKLRKLNDPEDSQGVAGDKEKDDGRLKSVNKVNKEDDDK 780
           QQI LVNQKA+EEWEKKQAEEEKLRKLNDPED   +AGDK+KD+GR+KS   VNKE+DDK
Sbjct: 721 QQIMLVNQKAREEWEKKQAEEEKLRKLNDPEDGSDIAGDKDKDEGRMKS---VNKEEDDK 780

Query: 781 MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGTDSASGSQSGKDTGRKSSSSAGR 840
           MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGG DSASGSQSGKDT RKSSS+AGR
Sbjct: 781 MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGMDSASGSQSGKDTVRKSSSAAGR 840

Query: 841 HGKDNQEGDRKGSSRKFGRNQINATQTRVARSISVKDVIAVLEREPQMSRSTTMYRLHNR 900
           HGKDNQEGDRKG+S+KFGRNQ++A+QTRVARSISVKDVIAVL+REPQMSRSTT+YRL N+
Sbjct: 841 HGKDNQEGDRKGTSKKFGRNQMSASQTRVARSISVKDVIAVLQREPQMSRSTTIYRLFNK 900

Query: 901 VRSEETGE 908
           VRSE TGE
Sbjct: 901 VRSEATGE 902

[Close]

BLAST of Sed0017090 vs. ExPASy TrEMBL
Match: A0A6J1I4L6 (transcription initiation factor TFIID subunit 4b isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470620 PE=3 SV=1)

HSP 1 Score: 1408.3 bits (3644), Expect = 0.0e+00
Identity = 782/908 (86.12%), Postives = 829/908 (91.30%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDMEGEGSAVSQASESDAAFTRGNNSSSG 60
           MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRD+EG+  AVS+A  SDAAF RG+N  S 
Sbjct: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDIEGDVPAVSKAPASDAAFPRGSNGPSS 60

Query: 61  LSLQTSSQNENTESNVQQDQNFRPKQEQHSSLMELERCASLPENQQQHNAAPLQASKNQP 120
           L LQ +SQNE TES+ QQDQNFRPKQEQHSSLMELERC+SLPENQQQHNAAPLQASKNQP
Sbjct: 61  LPLQ-ASQNEKTESHAQQDQNFRPKQEQHSSLMELERCSSLPENQQQHNAAPLQASKNQP 120

Query: 121 QAGGEQGEAEQVSAQFSQTSGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQAMV 180
           Q+  EQG+AEQVSAQFSQT GLQ SEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQ MV
Sbjct: 121 QSDCEQGDAEQVSAQFSQTPGLQGSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQTMV 180

Query: 181 SEQANNSINRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNKLKRNEMNKDDFIRLMRGVV 240
           SEQANN +NRSKQVPFASLMPVLMPQLDKDRAMQLQTLFN+LKRNEMNKDDFIRLMRGVV
Sbjct: 181 SEQANNPLNRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNRLKRNEMNKDDFIRLMRGVV 240

Query: 241 GDQMLRLAVCQVQSQPPPSVRQLSPRMSSMGPGAPNFSDPRPFAQLHQKGMNSPGVQSYI 300
           GDQMLRLAVCQVQ+QPPPSVRQLSPRM SMGPGAPNFSDPRPF+QLHQKGMNSP VQSYI
Sbjct: 241 GDQMLRLAVCQVQAQPPPSVRQLSPRMPSMGPGAPNFSDPRPFSQLHQKGMNSPAVQSYI 300

Query: 301 PSSASQARTSSGYPAMDKNMQSLREVEQRTDGNGNQLTSSSPGTIQERERSSVPVSGLEK 360
           PSSASQ R+SSGYPAMDKNMQSLREVEQRTDGN NQLTSSS GTIQERERSS+PV GLEK
Sbjct: 301 PSSASQGRSSSGYPAMDKNMQSLREVEQRTDGNANQLTSSSSGTIQERERSSIPVPGLEK 360

Query: 361 QQLHFQQKSFAMYGNSGNYHPYTGSNMNAPSLSHKPHTHEGQVKQIPQQAPSFDRLVTIN 420
           QQLHFQQKSF MYGNSGNYHPYTGSN+N  SLS KP  HEGQVKQI QQA +FDR VTIN
Sbjct: 361 QQLHFQQKSFPMYGNSGNYHPYTGSNINTSSLSLKPQPHEGQVKQISQQASNFDRQVTIN 420

Query: 421 DSKRVQGGNIPHLHNNLASQQNPVSWKPS-SKEQNMGPLSSMGYIKQEPSDQGSEQNKPQ 480
           D KRVQGGN+ HL NNL SQ +P  WK S SKEQ  GPLSSM YIKQEPSDQ SEQNK Q
Sbjct: 421 DPKRVQGGNVSHLRNNLTSQPSP--WKSSTSKEQTTGPLSSMSYIKQEPSDQVSEQNKTQ 480

Query: 481 LSNLQGLSSVSGIQAEQVNATPGIAKDALEKQTSKMGFPTSSNVMPPTSTNAANSISSDA 540
            SNLQGLSS+  +Q+EQVN TPGI+KD  EKQTSK+ FPTS+NVMP +STNAAN ISSDA
Sbjct: 481 HSNLQGLSSIPSMQSEQVNTTPGISKDPFEKQTSKVTFPTSNNVMPQSSTNAANPISSDA 540

Query: 541 NFLHESSPALSSQVPSATTPGMQNRISQKKAVIGQKKPLETLGSSPPLSSKKQKVSGAFA 600
           + L ESS  LSSQVPSATTPGMQNR  QKKA +GQKK LE LGSSPPLSSKKQKVSGAF+
Sbjct: 541 SSLPESSAVLSSQVPSATTPGMQNRAPQKKAAVGQKKALEALGSSPPLSSKKQKVSGAFS 600

Query: 601 DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRATEASRKVVQEEEDRLLLQKAPLQKK 660
           DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRA+EASRKVVQEEE+RLLLQKAPLQKK
Sbjct: 601 DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRASEASRKVVQEEEERLLLQKAPLQKK 660

Query: 661 LVEIMAKCGLKGMSNDVEKCLSLCVEERLRGIISNLIRLSKQRVDSEKPRHRTFITSDVR 720
           L+EIMAK GLK MSNDVEKCLSL VEERLRGIISNLIRLSKQRVD+EKPRHRT ITSDVR
Sbjct: 661 LMEIMAKYGLKSMSNDVEKCLSLSVEERLRGIISNLIRLSKQRVDTEKPRHRTHITSDVR 720

Query: 721 QQIALVNQKAKEEWEKKQAEEEKLRKLNDPEDSQGVAGDKEKDDGRLKSVNKVNKEDDDK 780
           QQI LVNQKA+EEWEKKQAEEEKLRKLNDPED   +AGDK+KD+GR+KSV KVNKE+DDK
Sbjct: 721 QQIMLVNQKAREEWEKKQAEEEKLRKLNDPEDGSDLAGDKDKDEGRMKSV-KVNKEEDDK 780

Query: 781 MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGTDSASGSQSGKDTGRKSSSSAGR 840
           MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGG DSASGSQSGKD  RKSSS+AGR
Sbjct: 781 MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGMDSASGSQSGKDAVRKSSSAAGR 840

Query: 841 HGKDNQEGDRKGSSRKFGRNQINATQTRVARSISVKDVIAVLEREPQMSRSTTMYRLHNR 900
           HGKDNQEGDRKG+S+KFGRNQ+NA+QTRVARSISVKDVIAVL+REPQMSRSTT+YRL N+
Sbjct: 841 HGKDNQEGDRKGTSKKFGRNQMNASQTRVARSISVKDVIAVLQREPQMSRSTTIYRLFNK 900

Query: 901 VRSEETGE 908
           VRSE TGE
Sbjct: 901 VRSEATGE 904

[Close]

BLAST of Sed0017090 vs. ExPASy TrEMBL
Match: A0A6J1I3C1 (transcription initiation factor TFIID subunit 4b isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470620 PE=3 SV=1)

HSP 1 Score: 1404.0 bits (3633), Expect = 0.0e+00
Identity = 780/908 (85.90%), Postives = 827/908 (91.08%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDMEGEGSAVSQASESDAAFTRGNNSSSG 60
           MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRD+EG+  AVS+A  SDAAF RG+N  S 
Sbjct: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDIEGDVPAVSKAPASDAAFPRGSNGPSS 60

Query: 61  LSLQTSSQNENTESNVQQDQNFRPKQEQHSSLMELERCASLPENQQQHNAAPLQASKNQP 120
           L LQ +SQNE TES+ QQDQNFRPKQEQHSSLMELERC+SLPENQQQHNAAPLQASKNQP
Sbjct: 61  LPLQ-ASQNEKTESHAQQDQNFRPKQEQHSSLMELERCSSLPENQQQHNAAPLQASKNQP 120

Query: 121 QAGGEQGEAEQVSAQFSQTSGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQAMV 180
           Q+  EQG+AEQVSAQFSQT GLQ SEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQ MV
Sbjct: 121 QSDCEQGDAEQVSAQFSQTPGLQGSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQTMV 180

Query: 181 SEQANNSINRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNKLKRNEMNKDDFIRLMRGVV 240
           SEQANN +NRSKQVPFASLMPVLMPQLDKDRAMQLQTLFN+LKRNEMNKDDFIRLMRGVV
Sbjct: 181 SEQANNPLNRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNRLKRNEMNKDDFIRLMRGVV 240

Query: 241 GDQMLRLAVCQVQSQPPPSVRQLSPRMSSMGPGAPNFSDPRPFAQLHQKGMNSPGVQSYI 300
           GDQMLRLAVCQVQ+QPPPSVRQLSPRM SMGPGAPNFSDPRPF+QLHQKGMNSP VQSYI
Sbjct: 241 GDQMLRLAVCQVQAQPPPSVRQLSPRMPSMGPGAPNFSDPRPFSQLHQKGMNSPAVQSYI 300

Query: 301 PSSASQARTSSGYPAMDKNMQSLREVEQRTDGNGNQLTSSSPGTIQERERSSVPVSGLEK 360
           PSSASQ R+SSGYPAMDKNMQSLREVEQRTDGN NQLTSSS GTIQERERSS+PV GLEK
Sbjct: 301 PSSASQGRSSSGYPAMDKNMQSLREVEQRTDGNANQLTSSSSGTIQERERSSIPVPGLEK 360

Query: 361 QQLHFQQKSFAMYGNSGNYHPYTGSNMNAPSLSHKPHTHEGQVKQIPQQAPSFDRLVTIN 420
           QQLHFQQKSF MYGNSGNYHPYTGSN+N  SLS KP  HEGQVKQI QQA +FDR VTIN
Sbjct: 361 QQLHFQQKSFPMYGNSGNYHPYTGSNINTSSLSLKPQPHEGQVKQISQQASNFDRQVTIN 420

Query: 421 DSKRVQGGNIPHLHNNLASQQNPVSWKPS-SKEQNMGPLSSMGYIKQEPSDQGSEQNKPQ 480
           D KRVQGGN+ HL NNL SQ +P  WK S SKEQ  GPLSSM YIKQEPSDQ SEQNK Q
Sbjct: 421 DPKRVQGGNVSHLRNNLTSQPSP--WKSSTSKEQTTGPLSSMSYIKQEPSDQVSEQNKTQ 480

Query: 481 LSNLQGLSSVSGIQAEQVNATPGIAKDALEKQTSKMGFPTSSNVMPPTSTNAANSISSDA 540
            SNLQGLSS+  +Q+EQVN TPGI+KD  EKQTSK+ FPTS+NVMP +STNAAN ISSDA
Sbjct: 481 HSNLQGLSSIPSMQSEQVNTTPGISKDPFEKQTSKVTFPTSNNVMPQSSTNAANPISSDA 540

Query: 541 NFLHESSPALSSQVPSATTPGMQNRISQKKAVIGQKKPLETLGSSPPLSSKKQKVSGAFA 600
           + L ESS  LSSQVPSATTPGMQNR  QKKA +GQKK LE LGSSPPLSSKKQKVSGAF+
Sbjct: 541 SSLPESSAVLSSQVPSATTPGMQNRAPQKKAAVGQKKALEALGSSPPLSSKKQKVSGAFS 600

Query: 601 DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRATEASRKVVQEEEDRLLLQKAPLQKK 660
           DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRA+EASRKVVQEEE+RLLLQKAPLQKK
Sbjct: 601 DQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRASEASRKVVQEEEERLLLQKAPLQKK 660

Query: 661 LVEIMAKCGLKGMSNDVEKCLSLCVEERLRGIISNLIRLSKQRVDSEKPRHRTFITSDVR 720
           L+EIMAK GLK MSNDVEKCLSL VEERLRGIISNLIRLSKQRVD+EKPRHRT ITSDVR
Sbjct: 661 LMEIMAKYGLKSMSNDVEKCLSLSVEERLRGIISNLIRLSKQRVDTEKPRHRTHITSDVR 720

Query: 721 QQIALVNQKAKEEWEKKQAEEEKLRKLNDPEDSQGVAGDKEKDDGRLKSVNKVNKEDDDK 780
           QQI LVNQKA+EEWEKKQAEEEKLRKLNDPED   +AGDK+KD+GR+KS   VNKE+DDK
Sbjct: 721 QQIMLVNQKAREEWEKKQAEEEKLRKLNDPEDGSDLAGDKDKDEGRMKS---VNKEEDDK 780

Query: 781 MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGTDSASGSQSGKDTGRKSSSSAGR 840
           MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGG DSASGSQSGKD  RKSSS+AGR
Sbjct: 781 MRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGMDSASGSQSGKDAVRKSSSAAGR 840

Query: 841 HGKDNQEGDRKGSSRKFGRNQINATQTRVARSISVKDVIAVLEREPQMSRSTTMYRLHNR 900
           HGKDNQEGDRKG+S+KFGRNQ+NA+QTRVARSISVKDVIAVL+REPQMSRSTT+YRL N+
Sbjct: 841 HGKDNQEGDRKGTSKKFGRNQMNASQTRVARSISVKDVIAVLQREPQMSRSTTIYRLFNK 900

Query: 901 VRSEETGE 908
           VRSE TGE
Sbjct: 901 VRSEATGE 902

[Close]

BLAST of Sed0017090 vs. TAIR 10
Match: AT5G43130.1 (TBP-associated factor 4 )

HSP 1 Score: 593.2 bits (1528), Expect = 3.5e-169
Identity = 442/935 (47.27%), Postives = 563/935 (60.21%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDMEGEGSAVSQASESDAAFTRGNNSSSG 60
           MDPSI KLLE+DEDE+MHSGA V+AFQAALNRD+EG     S  +        GNN S  
Sbjct: 1   MDPSIFKLLEEDEDESMHSGADVDAFQAALNRDIEG-----SMTTSIPHVTNPGNNHS-- 60

Query: 61  LSLQTSSQNENTESNVQQDQNFRPKQEQHS--SLMELERCASLPENQQQHN---AAPLQA 120
                S Q  +T  N   D N    Q QHS  S    E+  S  ENQ QH+   A     
Sbjct: 61  -----SRQQFSTWKNGIGDSNIN-VQTQHSLESTQMKEQEGSTLENQHQHDLKRANEPHL 120

Query: 121 SKNQPQAGGEQGEAEQVSAQFSQTSGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSN 180
             NQPQ     G+  +  +Q  Q++GL +SEK P   N+S+R  N+++ESQY+KLQKMS+
Sbjct: 121 QHNQPQDLHRAGQLWENPSQVPQSTGLPISEKNP-TGNESDRSHNQESESQYMKLQKMSS 180

Query: 181 QQAM-----VSEQANNSINRS-KQVPFASLMPVLMPQLDKDRAMQLQTLFNKLKRNEMNK 240
           QQA      V+    N INR+ KQVPFA+L+P LM QLDKDRA+QL+TL+ +LK+NE+ K
Sbjct: 181 QQARGVEPPVNPMNVNPINRNPKQVPFAALLPTLMNQLDKDRALQLRTLYARLKKNEIPK 240

Query: 241 DDFIRLMRGVVGDQMLRLAVCQVQSQPPPSVRQLSPRMSSMGPGAPNFSDPRPFAQLHQK 300
           + F R M+ +VGDQMLR+AV ++Q        Q++     +G  AP+          +QK
Sbjct: 241 EGFTRHMKDIVGDQMLRMAVSKLQ--------QVNYNQGKIGIQAPSTEIN------NQK 300

Query: 301 GMNSPGVQSYIPSSASQARTSSGYPAMDKNMQSLREVEQRTDGNGNQLTSSSPGTIQERE 360
             + P                             R V        NQL SS+ GT+    
Sbjct: 301 SQSDP-----------------------------RAVHL------NQLPSSASGTL---- 360

Query: 361 RSSVPVSGLEKQQLHFQQ---KSFAMYGNSGNYHPYTGSNMNAPSLSHKPHTHEGQVKQI 420
            SSVPV GL K   H  Q    SF MY  SG++H + G N NA   + +PH H+  ++ +
Sbjct: 361 GSSVPVQGLTKHPQHQMQHPPSSFPMYTTSGSFHSFPGPNTNASGSTLRPHLHDSHMRHV 420

Query: 421 --------------PQQA------PSFDRLVTINDSKRVQGGNIPHLHNNLASQQNPVSW 480
                         PQ        P F+R  ++ND  RVQGG   H  N   S   P++ 
Sbjct: 421 AHNQPMGSTGLGGPPQSTTNMMTMPKFERPSSVNDPSRVQGGATSHFQN---SSSLPLNS 480

Query: 481 KPSSKEQNMGPLSSMGYIKQEPSDQGSEQNKPQLSNLQGLSSVSGIQAEQVNATPGIAKD 540
            P       G  SS+ ++KQE  DQ  E+N                     NA    + +
Sbjct: 481 AP-------GQGSSVSHVKQESVDQSFEKN---------------------NAASMTSNE 540

Query: 541 ALEKQTSKMGFPTSSNVMPPTSTNAANSISSDANFLHESSPALSSQVPSATTPGMQN-RI 600
            LEK++S+M   T +N+ P +S + + +   DA      S  ++S+ P  T+ G  N R+
Sbjct: 541 DLEKESSRMVLSTPNNMAPASSVSPSMTTQLDA------STTMNSRGPLGTSQGGANARM 600

Query: 601 SQKKAVIGQKKPLETLGSSPPLSSKKQKVSGAFADQSIEQLNDVTAVSGVNIREEEEQLF 660
             KK  +GQKKPLETLGSSPP  SKKQKV+G   DQSIEQLNDVTAVSGVN+REEEEQLF
Sbjct: 601 PPKKPSVGQKKPLETLGSSPPPPSKKQKVAGNSMDQSIEQLNDVTAVSGVNLREEEEQLF 660

Query: 661 SSAKEDSRATEASRKVVQEEEDRLLLQKAPLQKKLVEIMAKCGLKGMSNDVEKCLSLCVE 720
           S AKED R +EASR+VV EEE+RL+LQK PLQ+KL EIMAK GLK +SNDVE+CLSLCVE
Sbjct: 661 SGAKEDGRVSEASRRVVHEEEERLILQKNPLQRKLAEIMAKAGLKQISNDVERCLSLCVE 720

Query: 721 ERLRGIISNLIRLSKQRVDSEKPRHRTFITSDVRQQIALVNQKAKEEWEKKQAEEEKLRK 780
           ER+RG++S++IRLSKQRVD+EK RHRTFITSD+R QI  +NQK KEEWEKKQAE EKL+K
Sbjct: 721 ERMRGLLSHIIRLSKQRVDAEKSRHRTFITSDIRLQINEMNQKVKEEWEKKQAEAEKLKK 780

Query: 781 LNDPEDSQ-GVAGDKEKDDGRLKSVNKVNKEDDDKMRTTAANVAARAAVGGDDMLSKWQL 840
            ++ E+   GV  +K+K+D R K V K NKEDDDKMRTTAANVAARAAVGGDD   KWQL
Sbjct: 781 PSESEEGDGGVDSEKDKEDNRSKGV-KGNKEDDDKMRTTAANVAARAAVGGDDAFLKWQL 821

Query: 841 MAEQARQKREGGTDSASGSQSGKDTGRKSSSSAGRHGKDNQEGDRKGS---SRKFGRNQI 897
           MAE ARQK        S S++GKD  +K++S  G++ KD Q+G R+ S    R+ G+NQ 
Sbjct: 841 MAE-ARQK--------SVSEAGKDGNQKTTSGGGKNSKDRQDGGRRFSGTGGRRVGKNQG 821

[Close]

BLAST of Sed0017090 vs. TAIR 10
Match: AT5G43130.2 (TBP-associated factor 4 )

HSP 1 Score: 582.0 bits (1499), Expect = 8.2e-166
Identity = 442/964 (45.85%), Postives = 563/964 (58.40%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDMEGEGSAVSQASESDAAFTRGNNSSSG 60
           MDPSI KLLE+DEDE+MHSGA V+AFQAALNRD+EG     S  +        GNN S  
Sbjct: 1   MDPSIFKLLEEDEDESMHSGADVDAFQAALNRDIEG-----SMTTSIPHVTNPGNNHS-- 60

Query: 61  LSLQTSSQNENTESNVQQDQNFRPKQEQHS--SLMELERCASLPENQQQHN---AAPLQA 120
                S Q  +T  N   D N    Q QHS  S    E+  S  ENQ QH+   A     
Sbjct: 61  -----SRQQFSTWKNGIGDSNIN-VQTQHSLESTQMKEQEGSTLENQHQHDLKRANEPHL 120

Query: 121 SKNQPQAGGEQGEAEQVSAQFSQTSGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSN 180
             NQPQ     G+  +  +Q  Q++GL +SEK P   N+S+R  N+++ESQY+KLQKMS+
Sbjct: 121 QHNQPQDLHRAGQLWENPSQVPQSTGLPISEKNP-TGNESDRSHNQESESQYMKLQKMSS 180

Query: 181 QQAM-----VSEQANNSINRS-KQVPFASLMPVLMPQLDKDRAMQLQTLFNKLKRNEMNK 240
           QQA      V+    N INR+ KQVPFA+L+P LM QLDKDRA+QL+TL+ +LK+NE+ K
Sbjct: 181 QQARGVEPPVNPMNVNPINRNPKQVPFAALLPTLMNQLDKDRALQLRTLYARLKKNEIPK 240

Query: 241 DDFIRLMRGVVGDQMLRLAVCQVQSQPPPSVRQLSPRMSSMGPGAPNFSDPRPFAQLHQK 300
           + F R M+ +VGDQMLR+AV ++Q        Q++     +G  AP+          +QK
Sbjct: 241 EGFTRHMKDIVGDQMLRMAVSKLQ--------QVNYNQGKIGIQAPSTEIN------NQK 300

Query: 301 GMNSPGVQSYIPSSASQARTSSGYPAMDKNMQSLREVEQRTDGNGNQLTSSSPGTIQERE 360
             + P                             R V        NQL SS+ GT+    
Sbjct: 301 SQSDP-----------------------------RAVHL------NQLPSSASGTL---- 360

Query: 361 RSSVPVSGLEKQQLHFQQ---KSFAMYGNSGNYHPYTGSNMNAPSLSHKPHTHEGQVKQI 420
            SSVPV GL K   H  Q    SF MY  SG++H + G N NA   + +PH H+  ++ +
Sbjct: 361 GSSVPVQGLTKHPQHQMQHPPSSFPMYTTSGSFHSFPGPNTNASGSTLRPHLHDSHMRHV 420

Query: 421 --------------PQQA------PSFDRLVTINDSKRVQGGNIPHLHNNLASQQNPVSW 480
                         PQ        P F+R  ++ND  RVQGG   H  N   S   P++ 
Sbjct: 421 AHNQPMGSTGLGGPPQSTTNMMTMPKFERPSSVNDPSRVQGGATSHFQN---SSSLPLNS 480

Query: 481 KPSSKEQNMGPLSSMGYIKQEPSDQGSEQNKPQLSNLQGLSSVSGIQAEQVNATPGIAKD 540
            P       G  SS+ ++KQE  DQ  E+N                     NA    + +
Sbjct: 481 AP-------GQGSSVSHVKQESVDQSFEKN---------------------NAASMTSNE 540

Query: 541 ALEKQTSKMGFPTSSNVMPPTSTNAANSISSDANFLHESSPALSSQVPSATTPGMQN-RI 600
            LEK++S+M   T +N+ P +S + + +   DA      S  ++S+ P  T+ G  N R+
Sbjct: 541 DLEKESSRMVLSTPNNMAPASSVSPSMTTQLDA------STTMNSRGPLGTSQGGANARM 600

Query: 601 SQKKAVIGQKKPLETLGSSPPLSSKKQKVSGAFADQSIEQLNDVTAVSGVNIREEEEQLF 660
             KK  +GQKKPLETLGSSPP  SKKQKV+G   DQSIEQLNDVTAVSGVN+REEEEQLF
Sbjct: 601 PPKKPSVGQKKPLETLGSSPPPPSKKQKVAGNSMDQSIEQLNDVTAVSGVNLREEEEQLF 660

Query: 661 SSAKEDSRATEASRKVVQEEEDRLLLQKAPLQKKLVEIMAKCGLKGMSNDVEKCLSLCVE 720
           S AKED R +EASR+VV EEE+RL+LQK PLQ+KL EIMAK GLK +SNDVE+CLSLCVE
Sbjct: 661 SGAKEDGRVSEASRRVVHEEEERLILQKNPLQRKLAEIMAKAGLKQISNDVERCLSLCVE 720

Query: 721 ERLRGIISNLIRLSKQRVDSEKPRHRTFITSDVRQQIALVNQKAKEEWEKKQAEEEKLRK 780
           ER+RG++S++IRLSKQRVD+EK RHRTFITSD+R QI  +NQK KEEWEKKQAE EKL+K
Sbjct: 721 ERMRGLLSHIIRLSKQRVDAEKSRHRTFITSDIRLQINEMNQKVKEEWEKKQAEAEKLKK 780

Query: 781 LNDPEDSQ-GVAGDKEKDDGRLKSVNKVNKEDDDKMRTTAANVAARAAVGGDDMLSKWQL 840
            ++ E+   GV  +K+K+D R K V K NKEDDDKMRTTAANVAARAAVGGDD   KWQL
Sbjct: 781 PSESEEGDGGVDSEKDKEDNRSKGV-KGNKEDDDKMRTTAANVAARAAVGGDDAFLKWQL 840

Query: 841 MAEQARQKREGGTDSASGSQSGKDTGRKSSSSAGRHGKDNQEGDRKGS------------ 897
           MAE ARQK        S S++GKD  +K++S  G++ KD Q+G R+ S            
Sbjct: 841 MAE-ARQK--------SVSEAGKDGNQKTTSGGGKNSKDRQDGGRRFSGTESSCGVGIVY 850

[Close]

BLAST of Sed0017090 vs. TAIR 10
Match: AT1G27720.1 (TBP-associated factor 4B )

HSP 1 Score: 370.9 bits (951), Expect = 2.9e-102
Identity = 292/779 (37.48%), Postives = 425/779 (54.56%), Query Frame = 0


Query: 152 VNDSNRMQNRDNESQYLKLQKMSNQQAMVSEQANNSINRSKQVPFASLMPVLMPQLDKD- 211
           +N++   ++   + +Y+KLQKMS+++    E+  + +N + ++  A +  +L   +D   
Sbjct: 43  INNTTGNESEKPQPRYMKLQKMSSKETPWVEKTVDPVNHNLRL--ARVTDLLRTVVDHQP 102

Query: 212 -RAMQLQTLFNKLKRNEMNKDDFIRLMRGVVGDQMLRLAVCQVQSQPPPSVRQLSPRMSS 271
            +      L  KLKR E+  ++F+R +R +VGDQ++R  + Q+    P ++         
Sbjct: 103 GKKTHCLNLHYKLKRKELTMEEFMRQLRDLVGDQIIRSVISQLPQLKPGNM--------- 162

Query: 272 MGPGAPNFSDPRPFAQLHQKGMNSPGVQSYIPSSASQARTSSGYPAMDKNMQSLREVEQR 331
                               G+  PG               S +  + K+ +   +    
Sbjct: 163 --------------------GIKVPG--------------RSNHDKVSKSAEFTAQESDP 222

Query: 332 TDGNGNQLTSSSPGTIQERERSSVPVSGLEK---QQLHFQQKSFAMYGNSGNYHPYTGSN 391
            + + NQL+S++ GT+     SS  V GL K   Q +     SF M   SG+ +PY G+N
Sbjct: 223 REVHVNQLSSTTSGTL----NSSTTVQGLNKHPEQHMQLPSSSFHMDTKSGSLNPYPGTN 282

Query: 392 MNAPSLSHKPHTHEGQVKQIPQQ------------------APSFDRLVTINDSKRVQGG 451
           + +P  S +    + Q ++  Q                    P F+R   +N   RVQ G
Sbjct: 283 VTSPGSSSRAKLPDFQHRENNQNVGIASVGGPTKSTINMTTVPKFERPTFVNGPSRVQDG 342

Query: 452 NIPHLHNNLASQQNPVSWKPS-SKEQNMGPLSSMGYIKQEPSDQGSEQ-NKPQLSNLQGL 511
            I     N +       W+ S +K+  +GP SS+ +++ +  DQ  EQ +KP+    QG 
Sbjct: 343 PISDFPKNSSFPLYSAPWQGSVTKDHTVGPSSSVIHVEHKLIDQSFEQAHKPRYLVQQG- 402

Query: 512 SSVSGIQAEQVNATPGIAKDALEKQTSKMGFPTSSNVMPPTSTNAANSISSDANFLHESS 571
             V+ +  +Q NA P  + D LEKQ+SKMG          TST +A+S+        +SS
Sbjct: 403 --VTNVPLKQKNAIPISSNDDLEKQSSKMGL--------FTSTTSASSVFPSMTTQLDSS 462

Query: 572 PALSSQVPSATTPGMQN-RISQKKAVIGQKKPLETLGSSPPLSSKKQKVSGAFADQSIEQ 631
             ++   PS T P + N  ++ K   +GQKKPLE LGSS P S KKQK+ G  +D+SIE+
Sbjct: 463 TMVNMPAPSETIPKIANVTVTPKMPSVGQKKPLEALGSSLPPSRKKQKICGTSSDESIEK 522

Query: 632 LNDVTAVSGVNIREEEEQLFSSA-KEDSRATEASRKVVQEEEDRLLLQKAPLQKKLVEIM 691
            NDVTAVSG+N+REEE+QL  S  K++ R ++A R++V  EE+R LLQK PLQ+KL EIM
Sbjct: 523 FNDVTAVSGINLREEEKQLLDSGPKKNDRVSKAYRRLVHGEEERTLLQKIPLQRKLTEIM 582

Query: 692 AKCGLKGMSNDVEKCLSLCVEERLRGIISNLIRLSKQRVDSEKPRHRTFITSDVRQQIAL 751
            K GLK + +DVE+CLSLCVEER+RG++ N+IR+SKQR D+EK R+RTFITSD+R++I  
Sbjct: 583 GKSGLKHIDHDVERCLSLCVEERMRGLLFNIIRISKQRTDAEKCRNRTFITSDIRKEINE 642

Query: 752 VNQKAKEEWEKKQAEEEKLRKLNDPEDSQGVAGDKEKDDGRLKSVNKVNKEDDDKMRTTA 811
           +NQK KEEWEKK + EEK ++            D EK+D R   V K NK+D+DK R  A
Sbjct: 643 MNQKVKEEWEKKHSGEEKNKE-----------NDTEKEDQRSNEV-KANKKDEDKERAKA 702

Query: 812 ANVAARAAVGGDDMLSKWQLMAEQARQKREGGTDSASGSQSGKDTGRKSSSSAGRHGKDN 871
           ANVA RAAVGGDD  SKW+LMAE ARQ                    +SS   GR+ K  
Sbjct: 703 ANVAVRAAVGGDDRFSKWKLMAE-ARQ--------------------RSSPGPGRNSK-- 719

Query: 872 QEGDRKGSSRKFGRNQINATQTRVARSISVKDVIAVLEREPQMSRSTTMYRLHNRVRSE 904
               +     +FG+NQ      +V RSISVKDVIAV+E+EPQMSRST +YR++NR+ S+
Sbjct: 763 ----KLSGGTQFGKNQ---GLPKVVRSISVKDVIAVVEKEPQMSRSTLLYRVYNRICSD 719

The following BLAST results are available for this feature:

BLAST of Sed0017090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153297.1	0.0e+00	87.67	transcription initiation factor TFIID subunit 4b [Momordica charantia] >XP_02215...	[more]
XP_023554163.1	0.0e+00	87.11	transcription initiation factor TFIID subunit 4b isoform X1 [Cucurbita pepo subs...	[more]
XP_022952261.1	0.0e+00	87.00	transcription initiation factor TFIID subunit 4b isoform X1 [Cucurbita moschata]...	[more]
XP_023554166.1	0.0e+00	86.89	transcription initiation factor TFIID subunit 4b isoform X2 [Cucurbita pepo subs...	[more]
XP_022952264.1	0.0e+00	86.78	transcription initiation factor TFIID subunit 4b isoform X2 [Cucurbita moschata]...	[more]

BLAST of Sed0017090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4K4L7	1.2e-164	45.85	Transcription initiation factor TFIID subunit 4b OS=Arabidopsis thaliana OX=3702...	[more]
Q6SJR1	4.0e-101	37.48	Transcription initiation factor TFIID subunit 4 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q92750	2.4e-05	23.96	Transcription initiation factor TFIID subunit 4B OS=Homo sapiens OX=9606 GN=TAF4...	[more]
O00268	3.2e-05	25.00	Transcription initiation factor TFIID subunit 4 OS=Homo sapiens OX=9606 GN=TAF4 ...	[more]

BLAST of Sed0017090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DH47	0.0e+00	87.67	transcription initiation factor TFIID subunit 4b OS=Momordica charantia OX=3673 ...	[more]
A0A6J1GJW9	0.0e+00	87.00	transcription initiation factor TFIID subunit 4b isoform X1 OS=Cucurbita moschat...	[more]
A0A6J1GL68	0.0e+00	86.78	transcription initiation factor TFIID subunit 4b isoform X2 OS=Cucurbita moschat...	[more]
A0A6J1I4L6	0.0e+00	86.12	transcription initiation factor TFIID subunit 4b isoform X1 OS=Cucurbita maxima ...	[more]
A0A6J1I3C1	0.0e+00	85.90	transcription initiation factor TFIID subunit 4b isoform X2 OS=Cucurbita maxima ...	[more]

BLAST of Sed0017090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43130.1	3.5e-169	47.27	TBP-associated factor 4	[more]
AT5G43130.2	8.2e-166	45.85	TBP-associated factor 4	[more]
AT1G27720.1	2.9e-102	37.48	TBP-associated factor 4B	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 726..746
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 569..595
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 326..358
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 733..783
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 833..855
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 581..595
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 856..871
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 425..481
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 806..872
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 815..832
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 324..358
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 432..481
None	No IPR available	PANTHER	PTHR15138:SF14	IP01149P-RELATED	coord: 45..900
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 650..696 e-value: 5.3E-9 score: 37.7
IPR007900	Transcription initiation factor TFIID component TAF4, C-terminal	PFAM	PF05236	TAF4	coord: 606..896 e-value: 6.5E-82 score: 275.4
IPR007900	Transcription initiation factor TFIID component TAF4, C-terminal	CDD	cd08045	TAF4	coord: 601..895 e-value: 1.25472E-48 score: 169.817
IPR022003	RST domain	PFAM	PF12174	RST	coord: 190..253 e-value: 1.9E-19 score: 69.3
IPR022003	RST domain	PROSITE	PS51879	RST	coord: 187..258 score: 31.373981
IPR045144	Transcription initiation factor TFIID component TAF4	PANTHER	PTHR15138	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4	coord: 45..900

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017090.1	Sed0017090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006352	DNA-templated transcription, initiation
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005669	transcription factor TFIID complex
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0003743	translation initiation factor activity