Sed0017088 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAGGAAAAGCGACATTGCTTATCTCACTCCACGCGGCGCAACCAACGCTTCTCATGTGATCTCTCTCTCTCTCTCTCTCTATAAAATCACTTCCCATTCATTTTTCGTTTTCTCAAATCCTTCATCCAATTTCTTAAAAACGAAGAAACAGAGAGAGATTCATTCCGTGAATATATAATCCATCGCATTCATCCATGGGGAACTGTTTGAGAAGCAGCAGAGTAACGGCGCAAGATCCAGAGATTTATTCGCCGGCGTCGGAACCGGAGAAAGTAGAGGCGGAGGATCGTAAACCGGCCGCCAGATCTGCAATGGCGAAGCCGAGAACTACCGGTGCTAAGAAGGTAGTGAGGTTTAACCTTCAAGAACATGATCATGAAAATCCGGCCGGCGGCGACGGAGAAGCTGAGATCGGCGATACCGGCGGAGTGTTGAGGATTAAAGTAGTGGTATCTCAGAAAGAATTGAAGCAGATTTTGAAGGATAGAGAGAACAATCCGTGCAGCGTTGAGGAATTGATCGCTGAATTGAAGGTGAAAGCCAGGACCAGTACGGTTTCAGATGCTATTCAACGGCCGAGATCGCCTCCCAAAAGCACTTTTCCTGATTCTGAAGATCTTCAATAAAACCCTCTTTCTCTCACCTTTCTTAGCAAAGATTTGAAAATATTGCTGCGGTGTGTTATTTGATCACCGAAACTTCCCCAAATTATCAATTTCGTGTTATCATTTGGATGGAAATTAGAATTAAGTTATTTCGAAACTCGTTTGAAAAACTAATTGATTGAATCAAATATTATCTTTTATTTCTACATTTTATTGAATGATAAACATTATTTCTAAGTTTATATTGAATCATAAGTCTAAATTTTAAGTTTTTATCTATGTGTGTTCTTATGTTCAAATTGTATGTGTGTTTTTGTAATCATTTATACATATTTGAATTAATTAGTGTATGCTTTTTTC AAAAGGAAAAGCGACATTGCTTATCTCACTCCACGCGGCGCAACCAACGCTTCTCATGTGATCTCTCTCTCTCTCTCTCTCTATAAAATCACTTCCCATTCATTTTTCGTTTTCTCAAATCCTTCATCCAATTTCTTAAAAACGAAGAAACAGAGAGAGATTCATTCCGTGAATATATAATCCATCGCATTCATCCATGGGGAACTGTTTGAGAAGCAGCAGAGTAACGGCGCAAGATCCAGAGATTTATTCGCCGGCGTCGGAACCGGAGAAAGTAGAGGCGGAGGATCGTAAACCGGCCGCCAGATCTGCAATGGCGAAGCCGAGAACTACCGGTGCTAAGAAGGTAGTGAGGTTTAACCTTCAAGAACATGATCATGAAAATCCGGCCGGCGGCGACGGAGAAGCTGAGATCGGCGATACCGGCGGAGTGTTGAGGATTAAAGTAGTGGTATCTCAGAAAGAATTGAAGCAGATTTTGAAGGATAGAGAGAACAATCCGTGCAGCGTTGAGGAATTGATCGCTGAATTGAAGGTGAAAGCCAGGACCAGTACGGTTTCAGATGCTATTCAACGGCCGAGATCGCCTCCCAAAAGCACTTTTCCTGATTCTGAAGATCTTCAATAAAACCCTCTTTCTCTCACCTTTCTTAGCAAAGATTTGAAAATATTGCTGCGGTGTGTTATTTGATCACCGAAACTTCCCCAAATTATCAATTTCGTGTTATCATTTGGATGGAAATTAGAATTAAGTTATTTCGAAACTCGTTTGAAAAACTAATTGATTGAATCAAATATTATCTTTTATTTCTACATTTTATTGAATGATAAACATTATTTCTAAGTTTATATTGAATCATAAGTCTAAATTTTAAGTTTTTATCTATGTGTGTTCTTATGTTCAAATTGTATGTGTGTTTTTGTAATCATTTATACATATTTGAATTAATTAGTGTATGCTTTTTTC ATGGGGAACTGTTTGAGAAGCAGCAGAGTAACGGCGCAAGATCCAGAGATTTATTCGCCGGCGTCGGAACCGGAGAAAGTAGAGGCGGAGGATCGTAAACCGGCCGCCAGATCTGCAATGGCGAAGCCGAGAACTACCGGTGCTAAGAAGGTAGTGAGGTTTAACCTTCAAGAACATGATCATGAAAATCCGGCCGGCGGCGACGGAGAAGCTGAGATCGGCGATACCGGCGGAGTGTTGAGGATTAAAGTAGTGGTATCTCAGAAAGAATTGAAGCAGATTTTGAAGGATAGAGAGAACAATCCGTGCAGCGTTGAGGAATTGATCGCTGAATTGAAGGTGAAAGCCAGGACCAGTACGGTTTCAGATGCTATTCAACGGCCGAGATCGCCTCCCAAAAGCACTTTTCCTGATTCTGAAGATCTTCAATAA MGNCLRSSRVTAQDPEIYSPASEPEKVEAEDRKPAARSAMAKPRTTGAKKVVRFNLQEHDHENPAGGDGEAEIGDTGGVLRIKVVVSQKELKQILKDRENNPCSVEELIAELKVKARTSTVSDAIQRPRSPPKSTFPDSEDLQ Homology
BLAST of Sed0017088 vs. NCBI nr
Match: XP_038902397.1 (uncharacterized protein LOC120089037 [Benincasa hispida]) HSP 1 Score: 109.4 bits (272), Expect = 2.6e-20 Identity = 74/128 (57.81%), Postives = 86/128 (67.19%), Query Frame = 0
BLAST of Sed0017088 vs. NCBI nr
Match: KAG6570883.1 (hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 109.4 bits (272), Expect = 2.6e-20 Identity = 78/137 (56.93%), Postives = 89/137 (64.96%), Query Frame = 0
BLAST of Sed0017088 vs. NCBI nr
Match: TYK24218.1 (hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa]) HSP 1 Score: 106.7 bits (265), Expect = 1.7e-19 Identity = 75/135 (55.56%), Postives = 91/135 (67.41%), Query Frame = 0
BLAST of Sed0017088 vs. NCBI nr
Match: KGN63254.1 (hypothetical protein Csa_022493 [Cucumis sativus]) HSP 1 Score: 102.4 bits (254), Expect = 3.2e-18 Identity = 77/150 (51.33%), Postives = 94/150 (62.67%), Query Frame = 0
BLAST of Sed0017088 vs. NCBI nr
Match: XP_022140639.1 (uncharacterized protein LOC111011249 [Momordica charantia]) HSP 1 Score: 101.7 bits (252), Expect = 5.5e-18 Identity = 72/133 (54.14%), Postives = 87/133 (65.41%), Query Frame = 0
BLAST of Sed0017088 vs. ExPASy TrEMBL
Match: A0A5D3DKZ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00200 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 8.2e-20 Identity = 75/135 (55.56%), Postives = 91/135 (67.41%), Query Frame = 0
BLAST of Sed0017088 vs. ExPASy TrEMBL
Match: A0A0A0LQE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418890 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 1.6e-18 Identity = 77/150 (51.33%), Postives = 94/150 (62.67%), Query Frame = 0
BLAST of Sed0017088 vs. ExPASy TrEMBL
Match: A0A6J1CG85 (uncharacterized protein LOC111011249 OS=Momordica charantia OX=3673 GN=LOC111011249 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 2.7e-18 Identity = 72/133 (54.14%), Postives = 87/133 (65.41%), Query Frame = 0
BLAST of Sed0017088 vs. ExPASy TrEMBL
Match: A0A6A4P389 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lalb_Chr19g0135851 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 2.9e-09 Identity = 50/129 (38.76%), Postives = 76/129 (58.91%), Query Frame = 0
BLAST of Sed0017088 vs. ExPASy TrEMBL
Match: A0A6A5NC21 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00028963 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 5.0e-09 Identity = 49/127 (38.58%), Postives = 75/127 (59.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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