Sed0017072 (gene) Chayote v1

Overview


Name	Sed0017072
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RING/U-box superfamily protein
Location	LG01: 60514096 .. 60517509 (-)
RNA-Seq Expression	Sed0017072
Synteny	Sed0017072

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGAGTTGTATATAATAAGCTTTGTGCCTCATTGTATAGTTCTATGATTCATTTTACTTTTCTAGTTAGATCTACTTTACCTGTATGATTTAGTTACTTTTTTTAGTTGAACTACCTTACCTGCTCCTGCCTGGTAGCTCTCAGGGAAATCTAAGATAGAGATGTCCTTACAAGGTGTAAACAACACCATTAAATTCTTTGGATAAACATTGGATCTCAAAATCATGGTGGTATTGTCCTATATGAAAATAATCACGCCTTGCTACTTTACAATTGTCCGCTGTGAACTTTTTTTTCATAAATCAAGGGAGACATTTCATAGTGAACATTAGAGCAAATGGGAGAGATCAAATGTTTCATCTTGGCATTGAGGAGTTCATGTTTATTCTTCATCTTGATGTGGTAATGAATAGTATCGATTGATCCTTAATTTAATGTTGAGCCCTCTTAGTTTATAAGACATCAAACATGTTGTCGATGAATGCAATATCATAAATTAAATATATTGTGTATGTTATATATTTTTTGTGTTGAGTTCGTATGTTTGAGTCCATTTTTTAGAGGTGCAATAAATAATTTTTTGTATTTTGTGTTTATTATGATGTCTTGAATAAAATAATTTATCTCCTCTTCTATATTCAACACTAAAATAATGTAAAATAAAATGTGGTAACTGATTTTATAAAACGGGCGTTGTAGGGATGTTTTTATAATTATAGGTGACCAATCATATTTGTTAAATGATTGGAAACTTCTCACCTTAAAAAGAAACCCTTAGGAATGGATGTCGATGGCTCCGCGTCACGATACGTTATGACAAGGAGTAACTATCACTAATGGACTAATGGTTTTGGTTCAGCTCTCTGCAAGTTCCACCTAAACCATTTCACATTCAAGCCATCCAAGCTGACGAGAGTAAAACTGAAGAATATTTATAATACGTAATAACGTATGAATAATACAAAGTATTATATTATTGTATTAACAATAAACAATATTGTATTAATGAGTATGGATAATATTATTGTATTTATGATTATGAATACAAATATTTTTAAATTTGATTATATTTATAGTTATTTTATCTGAATAAATTATCTATTACAATTTTTCTTTTTTTGTTAAAAAAAAAAAATCTTCCTGAGTTAAGTGAGAAAATAAGAGAAATAAGTCAATATATGTATCGATTTAAAAAGTAACAACATTTGATTTGATTTGTTTTTATTTTAGATTTTATAGTTGAAAATTGATTTATTTAAATAAGTATTTACTATAATATATAATTATTATTGGGTATATTTATATATTAAAATTAAAATTTAGATTTGAATGAATTTATACAGTTTTAACTCTAAAAGATAACTTTTTTTAAAATAAAATATGAAATATGAGATTCGAAAATAACGAACTTTATTTTGTTCGTAATAAATAAGCTACATAAATAAGTTATGTATAGAGAAAAAATCGTTCATTTGAGTAAGTAGAAAGTAATTGGGTAATTGAATGGTCAAGGAACTGAATAACCCTAACCCTAACCCTAACCCTAAAAGGTGGTTTCATGAAAAATTGAGCGGAGTTGATGGAGCTGATCGGAGGTCGGTCGGAGTTTTCCTACTGCTGCTCAGGGAGGGGAAAATCAGGAGCTCTATCAAAGTCTGAAAGTTTGTGACCAGGTTTGTCTTCGATTTCTGTAACCAAGAAAATCACGATTGTCTTCGATTTCTATTTATACTTCTAATTGCAAGTATTGTGTTCTGAAATCTGAGATTTTCGATTTCGTTTTTTTTTTTTTTTTCTTGTCTTCAATATTTGCGATCATCATCTGGTTCTGATTGAAGTCTTAGATGACAATTTTCTTCGATTTCTGTTTATACTTCTAATTGCAAGTATTGTGTTCTGTTCATTTAATATCCAAGATTTGCATCCTTGGTGCTGATTGCAAGTATTGTGTTTATACTTCGAATTGCAAGTATTGTGTTATGAAACATGAGATTGTCGATTTTTTTTTTTTTGTCTTCAATGTTTGCGTCTGGTTCTGGTTCTTATGGGAGTGTTAGATGACGATTTTCTTCGATTTCTGTTTATACTTATAATTGCAAGTATTGTGTTATTTCCATTTAGTATTCAAGATTTGCATTCTTGGTGCTGATTAAGGTCTTAGATCGTTGGAACTTTGATGTTCGATTGTCCATTTAGTATTGTGTTCGATTCATCTTCGTTTTCTAGGTTTTTGCACATTGAATTGCCTTTTGGAGTACATGGTTTAAAGGAATTGAGTGATGCCTGTATTTTCTTGTTTGGTTCTCAGGAATTTGGTTGATTGCTAACTTTCTGAATTTCTTTTCTCAGATGGGAATGGGAAAGAAGAAGGTAGAGATTTAAGGACTCATGATGGGGCTTGTGCTATTTGCTTAAACAAGATAGCTCTTCAAGAAACTGCCTTACCGAGAGGTTTCGAGCACGCCTATTGGTTTGTTCCAAATCTCATCCACTAATCTTTCATCTCTTCGTTAATGCACGATTTTCATCTGCTTTAACACATTAGATCATTGTTGATCTGTTCATTGAATCTTTTTAACTTCATCTGTTCTTTTTTTAATAAAAATTAAAAAAGAAAAGTAAAAGGAGAACTTAGTAGGAAAGATTTATATCCAAGTCTCACCAAGCAAGAATTTTAATTTTAATAGTTAAGGTTGTGTAGTGTTGAACAATCATTGAGTACAATAGGTGCGAATCAGATCAAATAGAACAATTATTAGGCATTTGAACTCAAGTTTTGAAGCATATGTTGAACCAGGCTTGGATATTTAGTAAATGACTAGCCACCATGTCCGTCCCCCAATGTCTATGCTTTGTTTGAACCTAGTTAGAGTTACCCTTCCAGCATGTCCCAGTTATGTCAGTACATTTATGCATTTTGTGCGATTTTTGGTTTTATACTTGCCTTGTAGCAAAAATACTCAATGTAGTTTTCACTATAACTAGCATTGTTCGCTTGAGGAAGGAGTGATCTTTTATTGGTTGCATTATCTTCTTTTATTTATTCATTCTTTTATGTTTATGAAGTGCGACTTGCATCCTTCGATGGGCCTCATACAACAAACCATTCTATAGACCTTTTATAGCTTGAACTCTTTGTACCTATTTAAATTACTATTCTTACTTTTTTTTTATTCATATATTGTCTGCATCTTGGTAGCATATGTGACTATATGTTTGAGGTGAGTGTATGCTTGCTCCTAAGAGTTTCATGGTATCAACCATTCATTGTTGAGGATCGTGGGGAGACATATCCTTCTTATGATGATCGTGTGGAGTACTATCCTTATGATGACGATGAATCTTACTTGGGCCATCAAGTCTTTGTATTGGAAATCGAAGGTGGATTTGTTAGACTTTGGAGGAGCTAA

mRNA sequence

ATGTCTGAGTTGTATATAATAAGCTTTGTGCCTCATTATGGGAATGGGAAAGAAGAAGGTAGAGATTTAAGGACTCATGATGGGGCTTGTGCTATTTGCTTAAACAAGATAGCTCTTCAAGAAACTGCCTTACCGAGAGGTTTCGAGCACGCCTATTGCATATGTGACTATATGTTTGAGGTGAGTGTATGCTTGCTCCTAAGAGTTTCATGGTATCAACCATTCATTGTTGAGGATCGTGGGGAGACATATCCTTCTTATGATGATCGTGTGGAGTACTATCCTTATGATGACGATGAATCTTACTTGGGCCATCAAGTCTTTGTATTGGAAATCGAAGGTGGATTTGTTAGACTTTGGAGGAGCTAA

Coding sequence (CDS)

ATGTCTGAGTTGTATATAATAAGCTTTGTGCCTCATTATGGGAATGGGAAAGAAGAAGGTAGAGATTTAAGGACTCATGATGGGGCTTGTGCTATTTGCTTAAACAAGATAGCTCTTCAAGAAACTGCCTTACCGAGAGGTTTCGAGCACGCCTATTGCATATGTGACTATATGTTTGAGGTGAGTGTATGCTTGCTCCTAAGAGTTTCATGGTATCAACCATTCATTGTTGAGGATCGTGGGGAGACATATCCTTCTTATGATGATCGTGTGGAGTACTATCCTTATGATGACGATGAATCTTACTTGGGCCATCAAGTCTTTGTATTGGAAATCGAAGGTGGATTTGTTAGACTTTGGAGGAGCTAA

Protein sequence

MSELYIISFVPHYGNGKEEGRDLRTHDGACAICLNKIALQETALPRGFEHAYCICDYMFEVSVCLLLRVSWYQPFIVEDRGETYPSYDDRVEYYPYDDDESYLGHQVFVLEIEGGFVRLWRS

Homology

[Close]

BLAST of Sed0017072 vs. NCBI nr
Match: XP_022153003.1 (uncharacterized protein LOC111020607 [Momordica charantia])

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-20
Identity = 63/126 (50.00%), Postives = 68/126 (53.97%), Query Frame = 0


Query: 19  EGRDLRTHDGACAICLNKIALQETALPRGFEHAYCIC----------------------- 78
           +G    +HDGACAICLNKIALQETAL RG EHAYC+                        
Sbjct: 35  QGTGHGSHDGACAICLNKIALQETALVRGCEHAYCVTCILRWASYTQKPTCPQCKHPFEF 94

Query: 79  ------------DYMFEVSVCLLLRVSWYQPFIVEDRGETYPSYDDRVEYYPYDDD---- 105
                       DYMFE SVCLLLR SWY P +VEDR ET   YDD  EYYPY+DD    
Sbjct: 95  LIVHRSLDGGIHDYMFEESVCLLLRASWYIPLVVEDREET---YDDPEEYYPYEDDDEEL 154

[Close]

BLAST of Sed0017072 vs. NCBI nr
Match: XP_023511780.1 (uncharacterized protein LOC111776696 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 105.9 bits (263), Expect = 2.5e-19
Identity = 61/126 (48.41%), Postives = 69/126 (54.76%), Query Frame = 0


Query: 19  EGRDLRTHDGACAICLNKIALQETALPRGFEHAYC------------------------- 78
           +G    +HDGACAICLNKI+L ETAL RG EHAYC                         
Sbjct: 35  QGTGHGSHDGACAICLNKISLPETALVRGCEHAYCTTCILRWASYTQKPTCPQCKHPFEF 94

Query: 79  ----------ICDYMFEVSVCLLLRVSWYQPFIVEDRGETYPSYDDRVEYYPYDD----- 105
                     I DYMFE SVCLLLR SWY+P IV+DR ET   YDD  EYYPY+D     
Sbjct: 95  LIVHRSLDGSIHDYMFEESVCLLLRASWYEPLIVKDREET---YDDPEEYYPYEDQDEEL 154

[Close]

BLAST of Sed0017072 vs. NCBI nr
Match: XP_022943783.1 (uncharacterized protein LOC111448431 [Cucurbita moschata])

HSP 1 Score: 105.9 bits (263), Expect = 2.5e-19
Identity = 61/126 (48.41%), Postives = 69/126 (54.76%), Query Frame = 0


Query: 19  EGRDLRTHDGACAICLNKIALQETALPRGFEHAYC------------------------- 78
           +G    +HDGACAICLNKI+L ETAL RG EHAYC                         
Sbjct: 35  QGTGHGSHDGACAICLNKISLPETALVRGCEHAYCTTCILRWASYTQKPTCPQCKHPFEF 94

Query: 79  ----------ICDYMFEVSVCLLLRVSWYQPFIVEDRGETYPSYDDRVEYYPYDD----- 105
                     I DYMFE SVCLLLR SWY+P IV+DR ET   YDD  EYYPY+D     
Sbjct: 95  LIVHRSLDGSIHDYMFEESVCLLLRASWYEPLIVKDREET---YDDPEEYYPYEDQDEEL 154

[Close]

BLAST of Sed0017072 vs. NCBI nr
Match: KAG6570419.1 (hypothetical protein SDJN03_29334, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 105.9 bits (263), Expect = 2.5e-19
Identity = 61/126 (48.41%), Postives = 69/126 (54.76%), Query Frame = 0


Query: 19  EGRDLRTHDGACAICLNKIALQETALPRGFEHAYC------------------------- 78
           +G    +HDGACAICLNKI+L ETAL RG EHAYC                         
Sbjct: 35  QGTGHGSHDGACAICLNKISLPETALVRGCEHAYCTTCILRWASYTQKPTCPQCKHPFEF 94

Query: 79  ----------ICDYMFEVSVCLLLRVSWYQPFIVEDRGETYPSYDDRVEYYPYDD----- 105
                     I DYMFE SVCLLLR SWY+P IV+DR ET   YDD  EYYPY+D     
Sbjct: 95  LIVHRSLDGSIHDYMFEESVCLLLRASWYEPLIVKDREET---YDDPEEYYPYEDQDEEL 154

[Close]

BLAST of Sed0017072 vs. NCBI nr
Match: XP_023533579.1 (uncharacterized protein LOC111795401 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 105.1 bits (261), Expect = 4.2e-19
Identity = 61/126 (48.41%), Postives = 68/126 (53.97%), Query Frame = 0


Query: 19  EGRDLRTHDGACAICLNKIALQETALPRGFEHAYC------------------------- 78
           +G    +HDG CAICLNKIALQETAL RG EHAYC                         
Sbjct: 35  QGTGHGSHDGVCAICLNKIALQETALVRGCEHAYCATCILRWASYNKNPTCPQCKHPFEF 94

Query: 79  ----------ICDYMFEVSVCLLLRVSWYQPFIVEDRGETYPSYDDRVEYYPYDDD---- 105
                     + D+MFE SVCLLLR SWY P IVEDR ET   Y+D  EYYPY+DD    
Sbjct: 95  LIVHRSLDGSVHDFMFEESVCLLLRASWYIPLIVEDREET---YEDPDEYYPYEDDDEEF 154

[Close]

BLAST of Sed0017072 vs. ExPASy TrEMBL
Match: A0A6J1DGD3 (uncharacterized protein LOC111020607 OS=Momordica charantia OX=3673 GN=LOC111020607 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 6.4e-21
Identity = 63/126 (50.00%), Postives = 68/126 (53.97%), Query Frame = 0


Query: 19  EGRDLRTHDGACAICLNKIALQETALPRGFEHAYCIC----------------------- 78
           +G    +HDGACAICLNKIALQETAL RG EHAYC+                        
Sbjct: 35  QGTGHGSHDGACAICLNKIALQETALVRGCEHAYCVTCILRWASYTQKPTCPQCKHPFEF 94

Query: 79  ------------DYMFEVSVCLLLRVSWYQPFIVEDRGETYPSYDDRVEYYPYDDD---- 105
                       DYMFE SVCLLLR SWY P +VEDR ET   YDD  EYYPY+DD    
Sbjct: 95  LIVHRSLDGGIHDYMFEESVCLLLRASWYIPLVVEDREET---YDDPEEYYPYEDDDEEL 154

[Close]

BLAST of Sed0017072 vs. ExPASy TrEMBL
Match: A0A6J1FXD4 (uncharacterized protein LOC111448431 OS=Cucurbita moschata OX=3662 GN=LOC111448431 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.2e-19
Identity = 61/126 (48.41%), Postives = 69/126 (54.76%), Query Frame = 0


Query: 19  EGRDLRTHDGACAICLNKIALQETALPRGFEHAYC------------------------- 78
           +G    +HDGACAICLNKI+L ETAL RG EHAYC                         
Sbjct: 35  QGTGHGSHDGACAICLNKISLPETALVRGCEHAYCTTCILRWASYTQKPTCPQCKHPFEF 94

Query: 79  ----------ICDYMFEVSVCLLLRVSWYQPFIVEDRGETYPSYDDRVEYYPYDD----- 105
                     I DYMFE SVCLLLR SWY+P IV+DR ET   YDD  EYYPY+D     
Sbjct: 95  LIVHRSLDGSIHDYMFEESVCLLLRASWYEPLIVKDREET---YDDPEEYYPYEDQDEEL 154

[Close]

BLAST of Sed0017072 vs. ExPASy TrEMBL
Match: A0A6J1H396 (uncharacterized protein LOC111459609 OS=Cucurbita moschata OX=3662 GN=LOC111459609 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 2.0e-19
Identity = 61/126 (48.41%), Postives = 68/126 (53.97%), Query Frame = 0


Query: 19  EGRDLRTHDGACAICLNKIALQETALPRGFEHAYC------------------------- 78
           +G    +HDG CAICLNKIALQETAL RG EHAYC                         
Sbjct: 35  QGTGHGSHDGVCAICLNKIALQETALVRGCEHAYCATCILRWASYNKNPTCPQCKHPFEF 94

Query: 79  ----------ICDYMFEVSVCLLLRVSWYQPFIVEDRGETYPSYDDRVEYYPYDDD---- 105
                     + D+MFE SVCLLLR SWY P IVEDR ET   Y+D  EYYPY+DD    
Sbjct: 95  LIVHRSLDGSVHDFMFEESVCLLLRASWYIPLIVEDREET---YEDPDEYYPYEDDDEEF 154

[Close]

BLAST of Sed0017072 vs. ExPASy TrEMBL
Match: A0A6J1K158 (uncharacterized protein LOC111490767 OS=Cucurbita maxima OX=3661 GN=LOC111490767 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.5e-19
Identity = 60/120 (50.00%), Postives = 66/120 (55.00%), Query Frame = 0


Query: 25  THDGACAICLNKIALQETALPRGFEHAYC------------------------------- 84
           +HDG CAICLNKIALQETAL RG EHAYC                               
Sbjct: 41  SHDGVCAICLNKIALQETALVRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRS 100

Query: 85  ----ICDYMFEVSVCLLLRVSWYQPFIVEDRGETYPSYDDRVEYYPYDDD-----ESYLG 105
               + D+MFE SVCLLLR SWY P IVEDR ET   Y+D  EYYPY+DD     E+YLG
Sbjct: 101 LDGSVHDFMFEESVCLLLRASWYVPLIVEDREET---YEDPDEYYPYEDDDEEFEEAYLG 157

[Close]

BLAST of Sed0017072 vs. ExPASy TrEMBL
Match: A0A0A0KK15 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G431760 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.5e-19
Identity = 58/120 (48.33%), Postives = 67/120 (55.83%), Query Frame = 0


Query: 19  EGRDLRTHDGACAICLNKIALQETALPRGFEHAYC------------------------- 78
           +G    +HDGACAICLNKIALQETAL RG EHAYC                         
Sbjct: 68  QGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTKKPTCPQCKHPFEF 127

Query: 79  ----------ICDYMFEVSVCLLLRVSWYQPFIVEDRGETYPSYDDRVEYYPYDDDESYL 104
                     I DYMFE SVCLLLR SWY+P I+E+R ETY   +D  +YYPY+DD+  L
Sbjct: 128 LIVHRSLDGSIHDYMFEESVCLLLRASWYKPPIIEEREETYDDPEDD-QYYPYEDDDEEL 186

[Close]

BLAST of Sed0017072 vs. TAIR 10
Match: AT5G19430.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 7.0e-12
Identity = 39/114 (34.21%), Postives = 54/114 (47.37%), Query Frame = 0


Query: 26  HDGACAICLNKIALQETALPRGFEHAYCIC------------------------------ 85
           H G CAICL++I LQETA+ +G EH YC+                               
Sbjct: 42  HGGCCAICLSEIPLQETAMVKGCEHTYCVTCILRWASCKESPTCPQCKHPFDFLSVHRAL 101

Query: 86  -----DYMFEVSVCLLLRVSWYQPF-IVEDRGETYPSYDDRVEYYPYDDDESYL 104
                D++FE SVCLLLR SW+ P  +VE    ++  +DD    Y Y+D++  L
Sbjct: 102 DGSIEDFLFEESVCLLLRASWFVPLDVVEQASYSHGYHDDFDIPYDYEDEDDDL 155

[Close]

BLAST of Sed0017072 vs. TAIR 10
Match: AT5G19430.2 (RING/U-box superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 7.0e-12
Identity = 39/114 (34.21%), Postives = 54/114 (47.37%), Query Frame = 0


Query: 26  HDGACAICLNKIALQETALPRGFEHAYCIC------------------------------ 85
           H G CAICL++I LQETA+ +G EH YC+                               
Sbjct: 27  HGGCCAICLSEIPLQETAMVKGCEHTYCVTCILRWASCKESPTCPQCKHPFDFLSVHRAL 86

Query: 86  -----DYMFEVSVCLLLRVSWYQPF-IVEDRGETYPSYDDRVEYYPYDDDESYL 104
                D++FE SVCLLLR SW+ P  +VE    ++  +DD    Y Y+D++  L
Sbjct: 87  DGSIEDFLFEESVCLLLRASWFVPLDVVEQASYSHGYHDDFDIPYDYEDEDDDL 140

[Close]

BLAST of Sed0017072 vs. TAIR 10
Match: AT5G12310.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-11
Identity = 42/117 (35.90%), Postives = 51/117 (43.59%), Query Frame = 0


Query: 26  HDGACAICLNKIALQETALPRGFEHAYCIC------------------------------ 85
           H G CAICL+ I LQETA+ +G EHAYC+                               
Sbjct: 39  HGGCCAICLDTIPLQETAMVKGCEHAYCVTCILRWASYKEKPTCPQCKLPFDFLNVHRAL 98

Query: 86  -----DYMFEVSVCLLLRVSWYQPF----IVEDRGETYPSYDDRVEYYPYDDDESYL 104
                D+MFE SVCLLLR SW+QP      V D       +D   EY   D+D+  L
Sbjct: 99  DGSVEDFMFEESVCLLLRASWFQPLEAVERVSDNDNFNYDFDIPPEYEEEDEDDDDL 155

The following BLAST results are available for this feature:

BLAST of Sed0017072 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153003.1	1.3e-20	50.00	uncharacterized protein LOC111020607 [Momordica charantia]	[more]
XP_023511780.1	2.5e-19	48.41	uncharacterized protein LOC111776696 [Cucurbita pepo subsp. pepo]	[more]
XP_022943783.1	2.5e-19	48.41	uncharacterized protein LOC111448431 [Cucurbita moschata]	[more]
KAG6570419.1	2.5e-19	48.41	hypothetical protein SDJN03_29334, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023533579.1	4.2e-19	48.41	uncharacterized protein LOC111795401 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0017072 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0017072 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DGD3	6.4e-21	50.00	uncharacterized protein LOC111020607 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1FXD4	1.2e-19	48.41	uncharacterized protein LOC111448431 OS=Cucurbita moschata OX=3662 GN=LOC1114484...	[more]
A0A6J1H396	2.0e-19	48.41	uncharacterized protein LOC111459609 OS=Cucurbita moschata OX=3662 GN=LOC1114596...	[more]
A0A6J1K158	3.5e-19	50.00	uncharacterized protein LOC111490767 OS=Cucurbita maxima OX=3661 GN=LOC111490767...	[more]
A0A0A0KK15	3.5e-19	48.33	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G431760 P...	[more]

BLAST of Sed0017072 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19430.1	7.0e-12	34.21	RING/U-box superfamily protein	[more]
AT5G19430.2	7.0e-12	34.21	RING/U-box superfamily protein	[more]
AT5G12310.1	1.2e-11	35.90	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47361	RING/U-BOX SUPERFAMILY PROTEIN	coord: 54..108 coord: 25..54
None	No IPR available	PANTHER	PTHR47361:SF5	SUBFAMILY NOT NAMED	coord: 25..54
None	No IPR available	PANTHER	PTHR47361:SF5	SUBFAMILY NOT NAMED	coord: 54..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017072.1	Sed0017072.1	mRNA