Sed0017066 (gene) Chayote v1

Overview


Name	Sed0017066
Type	gene
Organism	Sechium edule (Chayote v1)
Description	VQ domain-containing protein
Location	LG11: 1830973 .. 1831651 (-)
RNA-Seq Expression	Sed0017066
Synteny	Sed0017066

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTCTCCTTCTCCTTCTTTTCATCATTATTATTATTATCATTTTTTTTTTGTGGCTTTGTTTCTCTAAATGGAGAAATTTAGAAACCAGCTAATTCCTAATATTCATCCTCTTCACCAAAAAAATATCCAAGCTCCAAATAAAGCAAAAATGGAGACCATCGACAAGCCCATCAAAGTGAAGTACATTTCCAATCCCATGATGGTCAAGGCGAACAACGAGTCCGAGTTTCGAGCCATTGTTCAGAAGCTCACCGGCCAGGACTCGCCTCATGATGCTTTCGATATTCAATCACATGAACAATTCAGCCACGACGTATTTTATCCCCCACCGTCTACCGATGCTAAGGATCGTAATGGTTCGGTCTTCAGTGGTGTCTATGATCCGATTGGAGTCGGCGAGGGCCATGAATGGGTTGATGAAATAGAAGGTTCTTTTTCTGGGGTTCAAGCTTCTTATGTTGATATATGGAGACGAAGTTGAAAGAGAAGGTTTTATGAGTGAGAATGTTATAGTATGTTTTTATATGGGAATTTTGCATTCAATGTATCAGGGAAAACTGTATTTTTTTTATAATTCAACCATATTTGGCGGGAAGAATTTAAATACGAAACTTTATGGCTATCGAAATTTATTGTTGGACAATCAATATAAATTTGATTGTTACTGAATTGGTCAA

mRNA sequence

CCTTCTCCTTCTCCTTCTTTTCATCATTATTATTATTATCATTTTTTTTTTGTGGCTTTGTTTCTCTAAATGGAGAAATTTAGAAACCAGCTAATTCCTAATATTCATCCTCTTCACCAAAAAAATATCCAAGCTCCAAATAAAGCAAAAATGGAGACCATCGACAAGCCCATCAAAGTGAAGTACATTTCCAATCCCATGATGGTCAAGGCGAACAACGAGTCCGAGTTTCGAGCCATTGTTCAGAAGCTCACCGGCCAGGACTCGCCTCATGATGCTTTCGATATTCAATCACATGAACAATTCAGCCACGACGTATTTTATCCCCCACCGTCTACCGATGCTAAGGATCGTAATGGTTCGGTCTTCAGTGGTGTCTATGATCCGATTGGAGTCGGCGAGGGCCATGAATGGGTTGATGAAATAGAAGGTTCTTTTTCTGGGGTTCAAGCTTCTTATGTTGATATATGGAGACGAAGTTGAAAGAGAAGGTTTTATGAGTGAGAATGTTATAGTATGTTTTTATATGGGAATTTTGCATTCAATGTATCAGGGAAAACTGTATTTTTTTTATAATTCAACCATATTTGGCGGGAAGAATTTAAATACGAAACTTTATGGCTATCGAAATTTATTGTTGGACAATCAATATAAATTTGATTGTTACTGAATTGGTCAA

Coding sequence (CDS)

ATGGAGAAATTTAGAAACCAGCTAATTCCTAATATTCATCCTCTTCACCAAAAAAATATCCAAGCTCCAAATAAAGCAAAAATGGAGACCATCGACAAGCCCATCAAAGTGAAGTACATTTCCAATCCCATGATGGTCAAGGCGAACAACGAGTCCGAGTTTCGAGCCATTGTTCAGAAGCTCACCGGCCAGGACTCGCCTCATGATGCTTTCGATATTCAATCACATGAACAATTCAGCCACGACGTATTTTATCCCCCACCGTCTACCGATGCTAAGGATCGTAATGGTTCGGTCTTCAGTGGTGTCTATGATCCGATTGGAGTCGGCGAGGGCCATGAATGGGTTGATGAAATAGAAGGTTCTTTTTCTGGGGTTCAAGCTTCTTATGTTGATATATGGAGACGAAGTTGA

Protein sequence

MEKFRNQLIPNIHPLHQKNIQAPNKAKMETIDKPIKVKYISNPMMVKANNESEFRAIVQKLTGQDSPHDAFDIQSHEQFSHDVFYPPPSTDAKDRNGSVFSGVYDPIGVGEGHEWVDEIEGSFSGVQASYVDIWRRS

Homology

[Close]

BLAST of Sed0017066 vs. NCBI nr
Match: KAE8651551.1 (hypothetical protein Csa_019210 [Cucumis sativus])

HSP 1 Score: 114.0 bits (284), Expect = 1.0e-21
Identity = 82/149 (55.03%), Postives = 96/149 (64.43%), Query Frame = 0


Query: 1   MEKFRNQLIPNIHPLHQKNIQAPNKAKMETIDKPIKVKYISNPMMVKANNESEFRAIVQK 60
           ME F   L  N H  H+K  Q  NKA ++  +KPIKVKYIS+PMMVKANNESEFRAIVQK
Sbjct: 1   MENF-TTLPSNFH--HKKVSQVSNKATIDHQNKPIKVKYISSPMMVKANNESEFRAIVQK 60

Query: 61  LTGQDSPHDAFDIQSHEQFSHDVFYPPP-------STDAKDRNGSVFSG--VYDPIGVG- 120
           LTGQ SP    D QS + F+H VFYPPP       S D KD  G+  SG  ++D I  G 
Sbjct: 61  LTGQHSPD--HDDQSVQDFNH-VFYPPPPSSSPGVSFDPKDCYGNSASGDVLFDRIEDGD 120

Query: 121 EGHEWVDEIE-GSFSGVQA-SYVDIWRRS 138
           EG  W  E+E GSFSG QA S V+IW ++
Sbjct: 121 EGRYWRGEMELGSFSGFQASSCVNIWHKT 143

[Close]

BLAST of Sed0017066 vs. NCBI nr
Match: XP_022938305.1 (sigma factor binding protein 1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 112.8 bits (281), Expect = 2.3e-21
Identity = 73/131 (55.73%), Postives = 87/131 (66.41%), Query Frame = 0


Query: 9   IPNIHPLHQKNIQAPNKAKMETIDKPIKVKYISNPMMVKANNESEFRAIVQKLTGQDSPH 68
           +PN H  H+K   +  +A M   +KPIKVKYIS+PMMVKANNE EFRAIVQKLTGQ S  
Sbjct: 7   LPN-HLRHEKLEASNYRATM--ANKPIKVKYISSPMMVKANNEFEFRAIVQKLTGQHSAD 66

Query: 69  DAFDIQSHEQFSHDVFYPPPST----DAKDRNGSVFSGVYDPIGVGEGHEWVDEIEGSFS 128
           DAFD +S ++F+H  F PP ST    D+KD    V S  YDPIGVG       E++ S  
Sbjct: 67  DAFD-RSPQEFNH-AFCPPSSTVTSFDSKDCYDLVSSDAYDPIGVG-------EMKDSLY 125

Query: 129 GVQASYVDIWR 136
           G QASYVD+WR
Sbjct: 127 GFQASYVDVWR 125

[Close]

BLAST of Sed0017066 vs. NCBI nr
Match: XP_038877668.1 (sigma factor binding protein 1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 108.2 bits (269), Expect = 5.6e-20
Identity = 67/110 (60.91%), Postives = 74/110 (67.27%), Query Frame = 0


Query: 32  DKPIKVKYISNPMMVKANNESEFRAIVQKLTGQDSPHDAFDIQSHEQFSHDVFYPPPST- 91
           +KPIKVKYIS+PMMVKANNESEFRAIVQKLTGQ SPHDAFD QS E F + VFYPPPS+ 
Sbjct: 4   NKPIKVKYISSPMMVKANNESEFRAIVQKLTGQHSPHDAFD-QSAEDF-NQVFYPPPSSM 63

Query: 92  -----DAKDRNGSVFSGVYDPIGVGEGHEWVDEIEGSFSGVQA-SYVDIW 135
                D KD   S    V          +W  E+EGSFSG QA S V+ W
Sbjct: 64  AAPSFDPKDCYASASGDVL--------FDWQGEMEGSFSGFQASSCVNTW 103

[Close]

BLAST of Sed0017066 vs. NCBI nr
Match: KAG6586326.1 (Sigma factor binding protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 107.8 bits (268), Expect = 7.3e-20
Identity = 71/131 (54.20%), Postives = 86/131 (65.65%), Query Frame = 0


Query: 9   IPNIHPLHQKNIQAPNKAKMETIDKPIKVKYISNPMMVKANNESEFRAIVQKLTGQDSPH 68
           +PN H  H+K   +  +A M   +KPIKVKYIS+PMMVKA+NE EFRAIVQKLTGQ S  
Sbjct: 7   LPN-HLRHEKLEASNYRATM--ANKPIKVKYISSPMMVKASNEFEFRAIVQKLTGQHSAD 66

Query: 69  DAFDIQSHEQFSHDVFYPPPST----DAKDRNGSVFSGVYDPIGVGEGHEWVDEIEGSFS 128
           DAFD +S ++F+H  F PP ST    D+KD    V S  YDPI VG       E++ S  
Sbjct: 67  DAFD-RSPQEFNH-AFCPPSSTVTSFDSKDCYDLVSSDAYDPIRVG-------EMKDSLY 125

Query: 129 GVQASYVDIWR 136
           G QASYVD+WR
Sbjct: 127 GFQASYVDVWR 125

[Close]

BLAST of Sed0017066 vs. NCBI nr
Match: KAA0063579.1 (VQ motif-containing protein [Cucumis melo var. makuwa] >TYJ97906.1 VQ motif-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 107.5 bits (267), Expect = 9.6e-20
Identity = 79/148 (53.38%), Postives = 90/148 (60.81%), Query Frame = 0


Query: 1   MEKFRNQLIPNIHPLHQKNIQAPNK-AKMETIDKPIKVKYISNPMMVKANNESEFRAIVQ 60
           ME     L  + H  H+K  Q  NK   ++  +KPIKVKYIS+PMMVKANNESEFRAIVQ
Sbjct: 1   MENLITTLPTDFH--HRKVSQNSNKPTTIDQQNKPIKVKYISSPMMVKANNESEFRAIVQ 60

Query: 61  KLTGQDSP-HDAFDIQSHEQFSHDVFYPPP--------STDAKDRNGSVFSGVY--DPIG 120
           KLTGQ SP HDA   QS + F+H  FYPPP        S D +D  GS    V   D I 
Sbjct: 61  KLTGQHSPDHDANFDQSVQDFNH-AFYPPPPSSSTPGVSFDPRDCYGSASGDVLFDDRIE 120

Query: 121 VG-EGHEWVDEIEGSFSGVQA-SYVDIW 135
            G EG  W  E+EGSFSG QA S V+IW
Sbjct: 121 DGDEGRYWRGEMEGSFSGFQASSCVNIW 145

[Close]

BLAST of Sed0017066 vs. ExPASy Swiss-Prot
Match: Q9LDH1 (Sigma factor binding protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SIB1 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 9.0e-05
Identity = 41/110 (37.27%), Postives = 56/110 (50.91%), Query Frame = 0


Query: 25  KAKMETIDKPIKVKYISNPMMVKANNESEFRAIVQKLTGQDSPHDAFDIQS---HEQFSH 84
           K K  + +KPIKV+YISNPM V+    S+FR +VQ+LTGQ    DA D+Q    +   S 
Sbjct: 30  KKKTTSTNKPIKVRYISNPMRVQ-TCASKFRELVQELTGQ----DAVDLQPEPIYSPSSD 89

Query: 85  DVFYPPPSTDAKDR------NGSVFSGVYDPIGVGEGHEWVDEIEGSFSG 126
           D    PP+ +   R       G   S  Y+P+   E     D++   FSG
Sbjct: 90  DHNLSPPAENLAPRVLHQEPFGERDSDCYEPLN-AEDMFLPDQMSAGFSG 133

[Close]

BLAST of Sed0017066 vs. ExPASy Swiss-Prot
Match: O80669 (Sigma factor binding protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SIB2 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.0e-04
Identity = 26/47 (55.32%), Postives = 32/47 (68.09%), Query Frame = 0


Query: 20 IQAPNKAKMETIDKPIKVKYISNPMMVKANNESEFRAIVQKLTGQDS 67
          I    K K  T  KPIKV+YISNPM V+    S+FR +VQ+LTGQD+
Sbjct: 22 IPPKQKRKSTTTHKPIKVRYISNPMRVE-TCPSKFRELVQELTGQDA 67

[Close]

BLAST of Sed0017066 vs. ExPASy TrEMBL
Match: A0A6J1FJE0 (sigma factor binding protein 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111444440 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.1e-21
Identity = 73/131 (55.73%), Postives = 87/131 (66.41%), Query Frame = 0


Query: 9   IPNIHPLHQKNIQAPNKAKMETIDKPIKVKYISNPMMVKANNESEFRAIVQKLTGQDSPH 68
           +PN H  H+K   +  +A M   +KPIKVKYIS+PMMVKANNE EFRAIVQKLTGQ S  
Sbjct: 7   LPN-HLRHEKLEASNYRATM--ANKPIKVKYISSPMMVKANNEFEFRAIVQKLTGQHSAD 66

Query: 69  DAFDIQSHEQFSHDVFYPPPST----DAKDRNGSVFSGVYDPIGVGEGHEWVDEIEGSFS 128
           DAFD +S ++F+H  F PP ST    D+KD    V S  YDPIGVG       E++ S  
Sbjct: 67  DAFD-RSPQEFNH-AFCPPSSTVTSFDSKDCYDLVSSDAYDPIGVG-------EMKDSLY 125

Query: 129 GVQASYVDIWR 136
           G QASYVD+WR
Sbjct: 127 GFQASYVDVWR 125

[Close]

BLAST of Sed0017066 vs. ExPASy TrEMBL
Match: A0A0A0LFF9 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010160 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.4e-21
Identity = 82/146 (56.16%), Postives = 94/146 (64.38%), Query Frame = 0


Query: 1   MEKFRNQLIPNIHPLHQKNIQAPNKAKMETIDKPIKVKYISNPMMVKANNESEFRAIVQK 60
           ME F   L  N H  H+K  Q  NKA ++  +KPIKVKYIS+PMMVKANNESEFRAIVQK
Sbjct: 1   MENF-TTLPSNFH--HKKVSQVSNKATIDHQNKPIKVKYISSPMMVKANNESEFRAIVQK 60

Query: 61  LTGQDSPHDAFDIQSHEQFSHDVFYPPP-------STDAKDRNGSVFSG--VYDPIGVG- 120
           LTGQ SP    D QS + F+H VFYPPP       S D KD  G+  SG  ++D I  G 
Sbjct: 61  LTGQHSPD--HDDQSVQDFNH-VFYPPPPSSSPGVSFDPKDCYGNSASGDVLFDRIEDGD 120

Query: 121 EGHEWVDEIE-GSFSGVQA-SYVDIW 135
           EG  W  E+E GSFSG QA S V+IW
Sbjct: 121 EGRYWRGEMELGSFSGFQASSCVNIW 140

[Close]

BLAST of Sed0017066 vs. ExPASy TrEMBL
Match: A0A5A7VDH6 (VQ motif-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G001220 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 4.6e-20
Identity = 79/148 (53.38%), Postives = 90/148 (60.81%), Query Frame = 0


Query: 1   MEKFRNQLIPNIHPLHQKNIQAPNK-AKMETIDKPIKVKYISNPMMVKANNESEFRAIVQ 60
           ME     L  + H  H+K  Q  NK   ++  +KPIKVKYIS+PMMVKANNESEFRAIVQ
Sbjct: 1   MENLITTLPTDFH--HRKVSQNSNKPTTIDQQNKPIKVKYISSPMMVKANNESEFRAIVQ 60

Query: 61  KLTGQDSP-HDAFDIQSHEQFSHDVFYPPP--------STDAKDRNGSVFSGVY--DPIG 120
           KLTGQ SP HDA   QS + F+H  FYPPP        S D +D  GS    V   D I 
Sbjct: 61  KLTGQHSPDHDANFDQSVQDFNH-AFYPPPPSSSTPGVSFDPRDCYGSASGDVLFDDRIE 120

Query: 121 VG-EGHEWVDEIEGSFSGVQA-SYVDIW 135
            G EG  W  E+EGSFSG QA S V+IW
Sbjct: 121 DGDEGRYWRGEMEGSFSGFQASSCVNIW 145

[Close]

BLAST of Sed0017066 vs. ExPASy TrEMBL
Match: A0A6J1CME4 (sigma factor binding protein 1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111012954 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.1e-16
Identity = 56/108 (51.85%), Postives = 72/108 (66.67%), Query Frame = 0


Query: 31  IDKPIKVKYISNPMMVKANNESEFRAIVQKLTGQDSPHDAFD---IQSHEQFSHDVFYPP 90
           ++KPIKVKYISNPMMVKAN+ESEFR IVQ+LTGQ+SP DAF+       E+ +H  + PP
Sbjct: 1   MEKPIKVKYISNPMMVKANSESEFREIVQRLTGQNSPDDAFESPAFGGEEELNHAFYPPP 60

Query: 91  PSTDAKDRNGSVFSGVYDPIG-VGEGHEWVDEIEGSFSGVQASYVDIW 135
           PST         +  V   +G +GEG    DE++G FSG QAS V+ +
Sbjct: 61  PSTAVSTDPKGYYGLVSGKVGELGEGCFRQDEMQG-FSGFQASCVNTY 107

[Close]

BLAST of Sed0017066 vs. ExPASy TrEMBL
Match: A0A1Q3BFQ5 (VQ domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_10278 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 3.1e-08
Identity = 47/122 (38.52%), Postives = 65/122 (53.28%), Query Frame = 0


Query: 16  HQKNIQAPNKAKMETIDKPIKVKYISNPMMVKANNESEFRAIVQKLTGQDSP----HDAF 75
           H    Q   K K    + PIKV +IS+PM+VKA+N SEFRAIVQ+LTGQ S      D +
Sbjct: 11  HDHKSQKLTKVKK---NDPIKVTHISSPMLVKASNPSEFRAIVQELTGQYSNINDFGDLY 70

Query: 76  DIQSHEQFSHDVFY--PPPSTDAKDRNGSVFSGVYDPIGVGEGHEWVDEIEGSFSGVQAS 132
              +  + ++ V Y   PP  +    N    S    P+   +G  W D+ E SF G+Q+S
Sbjct: 71  ATSNTYEEANQVSYHKAPPQANIDTENSDTISSSISPLEFNQGFVWGDDSE-SFFGLQSS 128

[Close]

BLAST of Sed0017066 vs. TAIR 10
Match: AT3G56710.1 (sigma factor binding protein 1 )

HSP 1 Score: 48.1 bits (113), Expect = 6.4e-06
Identity = 41/110 (37.27%), Postives = 56/110 (50.91%), Query Frame = 0


Query: 25  KAKMETIDKPIKVKYISNPMMVKANNESEFRAIVQKLTGQDSPHDAFDIQS---HEQFSH 84
           K K  + +KPIKV+YISNPM V+    S+FR +VQ+LTGQ    DA D+Q    +   S 
Sbjct: 30  KKKTTSTNKPIKVRYISNPMRVQ-TCASKFRELVQELTGQ----DAVDLQPEPIYSPSSD 89

Query: 85  DVFYPPPSTDAKDR------NGSVFSGVYDPIGVGEGHEWVDEIEGSFSG 126
           D    PP+ +   R       G   S  Y+P+   E     D++   FSG
Sbjct: 90  DHNLSPPAENLAPRVLHQEPFGERDSDCYEPLN-AEDMFLPDQMSAGFSG 133

[Close]

BLAST of Sed0017066 vs. TAIR 10
Match: AT2G41180.1 (VQ motif-containing protein )

HSP 1 Score: 47.0 bits (110), Expect = 1.4e-05
Identity = 26/47 (55.32%), Postives = 32/47 (68.09%), Query Frame = 0


Query: 20 IQAPNKAKMETIDKPIKVKYISNPMMVKANNESEFRAIVQKLTGQDS 67
          I    K K  T  KPIKV+YISNPM V+    S+FR +VQ+LTGQD+
Sbjct: 22 IPPKQKRKSTTTHKPIKVRYISNPMRVE-TCPSKFRELVQELTGQDA 67

The following BLAST results are available for this feature:

BLAST of Sed0017066 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651551.1	1.0e-21	55.03	hypothetical protein Csa_019210 [Cucumis sativus]	[more]
XP_022938305.1	2.3e-21	55.73	sigma factor binding protein 1, chloroplastic-like [Cucurbita moschata]	[more]
XP_038877668.1	5.6e-20	60.91	sigma factor binding protein 1, chloroplastic-like [Benincasa hispida]	[more]
KAG6586326.1	7.3e-20	54.20	Sigma factor binding protein 1, chloroplastic, partial [Cucurbita argyrosperma s...	[more]
KAA0063579.1	9.6e-20	53.38	VQ motif-containing protein [Cucumis melo var. makuwa] >TYJ97906.1 VQ motif-cont...	[more]

BLAST of Sed0017066 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDH1	9.0e-05	37.27	Sigma factor binding protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
O80669	2.0e-04	55.32	Sigma factor binding protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Sed0017066 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FJE0	1.1e-21	55.73	sigma factor binding protein 1, chloroplastic-like OS=Cucurbita moschata OX=3662...	[more]
A0A0A0LFF9	1.4e-21	56.16	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010160 PE=4 SV=...	[more]
A0A5A7VDH6	4.6e-20	53.38	VQ motif-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6J1CME4	3.1e-16	51.85	sigma factor binding protein 1, chloroplastic-like OS=Momordica charantia OX=367...	[more]
A0A1Q3BFQ5	3.1e-08	38.52	VQ domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_10278...	[more]

BLAST of Sed0017066 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56710.1	6.4e-06	37.27	sigma factor binding protein 1	[more]
AT2G41180.1	1.4e-05	55.32	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 40..67 e-value: 2.0E-9 score: 36.7
None	No IPR available	PANTHER	PTHR33624:SF17	VQ MOTIF PROTEIN	coord: 16..79
IPR039335	Sigma factor binding protein 1/2	PANTHER	PTHR33624	SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC	coord: 16..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017066.1	Sed0017066.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051091	positive regulation of DNA-binding transcription factor activity