Sed0017032 (gene) Chayote v1

Overview


Name	Sed0017032
Type	gene
Organism	Sechium edule (Chayote v1)
Description	TLC domain-containing protein
Location	LG08: 34109068 .. 34114311 (-)
RNA-Seq Expression	Sed0017032
Synteny	Sed0017032

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAAATAAAGAGTGCTAAAAGTTGATAAATTCATCGGCCAAGGCGCGAAGTTATCATATTTCTTGGGTCATTACTACAAGAATTGGATTGAAAATTCAATTCAATCCACAAGAACACGACGTCCCATCTCTGGACACTCAAATCCATTGCTGATTAGCAAAACCCCACTTGCAATTTCACCATTTTCCCCTTATTGATATTGTTCGCAATTTCTCTTCATCTTGTCGCGATTACCCTTTTAGAATCTTGCGGTTGGAGATTCCTAACGCTTCACATTGATTAAACCTCACGGTTCTTCATCTTTTGCACCACCCGTCGGTTGTTGCATTTCCCTTTACACATTACCTTATTTTGTTCATCTTTGAAAAAGGGCGAACCCCAAATCTTCTGCATCTCACTCGTGATCTGGGGTTTTCATTTTTGAGGTATTGCTTCGTTCTTGTGTTTGTTCTTGCGGTGATTTGGCTGTTTTCTTCGTTTTTTTGGGTACCCATTTGCATTTTGATCTTTTATTTTGATGGGATCTTCTTAATTCGTGAATTTGTGTGTTTACTGTAAGTTCCACCGTCTGATCTTTGAGCTTACCTGATTGTTTGATTTTGTAGCGTTTATGGGGTTTGTTCTAAATGTTTAACACTCTTGCACTTCGTTTTAATTCAATGAGTGATCATGGTTTCTCTTTTAGGCTGTCTTACTGTGACGTTTGATCTTTAATGTGTTGTTGGGTTGTGCATCCTTTTCTAGCTTGATGTTTCTTATCTACTGCTGTTGTTGGGATCCTGTTCAAGTCTTTATATTTGAGTTCGTAGTGTTCTTAAAGGGATTAGTGTAGATCTTTTGGATGATCATGGAAGTTGATTAGTTGAAATACAGTGACAGTTTACTGTTTTGGAAACATGTATGGAAAGAATAAATGGGATGCGCTGTTTGTCCAAATTGTCTATCTGTTCATGTTGAGGCTGATTCTTTTTTTATCGATCTGCTTAGAAGGATACTCTGTCACCATGATCGTTTGTTTTTCATTTTCTACTTCTTTTTCAACTTTTGGTATTTTCATATCTAGACTATTGGCAATCTCCCTTAAATGAATGCCATTGATAAGATTTAAAAAAAAAAAATGTTTTGCTGATATTTTGGGAAGAAACGATGTTGTTCTTGTTCGGTGCTTGCCGAAATAAGTGGTTGGTTCTTTGAAATGCTTTCTTGTTGGTGGTTGAATGGTAAAGTAAGAGTTGTGCGTTTAGTGCGTCAAGAGCTCTTTTGTAGAAATATAAGAAATGATAGAATTTTCAACAGAATTATAGTTTAGGATGACAATCTTGACATTGCAGAGTTTAACGTCTCAACTTAGAGTTTTCTTCACAAAGAGTTGTGTAATTAAATATTTTCTAGGATAAATCTACACCGAAGACATTTAGTTTGGTCCAAGAAGAAGAAGAAAAATTATGGAACAACTTAGCTAAACGATTCTTGTGCTCTTTTGTGGGAACTTGAGACTGAATGAGTAGAAATTTTTTATGAGATGGAATAAGGAGTAGACTATATTTTTATGTTATTGTCCTCTTCTTGGTGTCTCACGTTCGACTTCTTTTTGTGAAGTTAATTGTCGCCTATAGACTCTGACTGCTTATGCCCAAATGTTTATCACCATTCTTCCCATTTGTTTCATACTAAGTTCTTCATATTTGGTCAAGAAGCGATGCAACATGGAGTGCGGGAGCACATAGTTAATTCAGTCTAAGGTACAGCGATTTTCCGAAGGTTATGTAGTGAAACAAAACAATGGCAAGATCTTTGAAGACTGTAATGGCTATTAAGTCTTACCAAAGTCAAGCTGATGCATTAGTGAAGCACTACTTATTAGCAGACCGTTTGATCCCATACACCTCTGTCCTCGGAGGCATGCTTGCTTGTAAATTGGTATGTAGCACCTTTTACCTCATGCTGGATATTAGAAGGAAAAATTTCTGCCATGTTTATTGCTTCTCTTACCATTTTCTCTTTCCGTCTACAGGTCTATGATCTTACTCAATTAGTTAGCAATTCTTCCATCAAGAGTTATCTGGGTCTTACAAAAATCCAACGAGTTGAGTGGAATAACCGGTTAGTCGATATCTTTAACTGTCCATTGCCTCCTTAATCTAGTAAGTGGACTGTTATGGCCATTTCTGATATTCAAACTACAATTGACAGCGGCATGTCCACTATTCATGCAATCTATATCTCAATTATGTCATTGTACTTCGTTTTCTGGTCAGATCTCTTCTCTGACCAGCGTCATGCTGGCTTTGTTACCTTTCAAAGTTCAACATTGTCTACTTTCACATTGGGGGTAAGGTTTCTATTAACTAGTCTTTAATTAATCTCAGCTTCCTCTTGAAATTTCTTATTTCCTATTACTCTCTATATCTGCTAGTTAAGCCCTCACCACCCTCAACAGAAGTAATAACCTCTGGTTCAAGTTCAAATATTTAACTAATTATTTATCAGCAGTTGTTTGCCTAGCTATAACCATATTTTCATCTTTAATAACGAGGTACAATTAGGAAATTAAGCCCGTATTTTTTTATGGCTCCAAGTCTACTCTTGCCAAAAGAAAGGCTTATCTTCCTGAGACTATCTCCGGTTGGAAAAAGCTATTAGAAGATTTGAATTGGTTCATTTATGGTTGGAGCTGGGAAATGCAAAATTCTGAACAAAATAGAAGTTTTTAGATAACTGAAACTGATAAGGAGCAAGTAAATAGTGAAACTACAAGGGAAAGAGCCAAAATATTTTGTGCTCAGCTTCTTGTGTGTTGCTTAAGAAAACTAATGGCAATTGGCAACGCCAAATGTTCAGAAAACCCAACATTTCCTATTTGCAAGTCCATTTTTATTGGTTTACTAGCAAGGACTCACTGCTGAATAGAACGGTAACAATCAAAGATAAATTGGAAGCTACTAGGTTATTTTTTTTGAAACCGGAAAATTAGAAGTTCGCTCCTCTATACCCAGGGTAACCACGTCCGTCTCTAGGCCAAGCACCTACTAGGGTATTGATTAGGCTAATAAGTAATAACTAGCTAAAAGCTATTTGGTATTACAAGTTGTCCAGAAATTACCAGAATAGGAAGTAATTCCTAAATCATCACTGTGGAACAAAGACTACAAAAACACCTTAAGCTTTCTAGGGAACTTGTACTCCAAATTGAAAGGTTAGTTCATTGAGAAGATAGTGTGGTGCTTGCACCAACTCTCCTATTTGCCTGTTTTTGATTTGAGAACAATGTCTATGATAGAACTTCCAAGATTCTTGGGACTGCTTGAAAGACTTTTTGAGGCATATGAGCTTCTATTCTCTTTGCCTTGAATTTTTCTTAAGTCATAACCAAAATTTTGATCATTTACCTTTATCCAGATTTCAGTTGGATACTTCTTGGCAGATCTTGGATTGATTGTTTGGCTGTACCCTTCTTTAGGTGGGATGGAGTATGTAAGTACCTTCACTGCTGATAGACCTTCAAATTTGATAAGATTAGTGCCTAATTAGGAAACTTTGATGATAGGTTGTGCATCATTCTCTTTCTGGACTAGCAGTAGCATATTCTGTTTTTTCTGGAGAAGGGCAACTCTATACATATATGGTCCTCATTTCGGAGATTACGACTCCTGAGATTAATATGAGATGGTAGGTTTTCATTATGGTATTGATTTTCTATTTTTAAGTTCTGCCTCTTAATTAGTTTCTTGTTCAAAGAAAAAAAAAGTTCTGGTCTTGGTTCTTTCACATTTTTTTTGAGTTCAACAACAATTGGGAGTAGGGGATTCAAATACTTGACATTTTGATCATTAGTCTATATTTTATGCTCGGTCTATGCTTTTGTTGGCTTAATTCTTTCATATTTCGCTGAAGGTTTCTTGATACAGCTGGTATGAAGAGGTCCTGTGCATATCTGATTAATGGCATTGTAATATTTTTTGCGTGGCTGGTGAGTTATTATCTGATGCCCATCTGATATGTTTACAAAAATGACACAAGCACGACTGTCTGTAGCTTGAAGGAATGCTAAAAGATACTAATGAATTGGATTTAACTTAACTGAACGTGAACGACCACAGCATGTAGTTCTATCCTCAATCTTCTATTTTGATTATATTTTCTTGTGTTTGGAATGATGGTTATGGTTACTGATGGGTATTGAAAAATGAAAACAGGTTGCTCGCATATTGCTGTTTGGTTACACATTCTATCATGTTTACCTGCACTATGATCAGGTATTTTTAAGATCAACTATGCATTTCCCTGAAACTTGTACTAGTCAACAGGAGTTTTCCAGTGCTTATGGCTTTGAATTGGTATTGAACACAATTTCATTAAAGTAGAAGCTGATTCAATTCTTTCCATTTTGCTTGGCCTCTCAGAATGGCATTTGTTTAATCTTGCTTTATTTCTTGTGTTCTTTTACTGGTTATCAAAGTAGGAATACTACAAATAGTTTGAAGCCTAAGTAATGAAAGGAGTCCTCACCATTTCAATTCATTATCATGTTCTGTTTTCTTCCCTTGTGTTAAATCATCCTTGAAGACCTCCAAGTATGCAAGTTTTCTAGTCTATTCATAACTCATAAGCTTAAGCTTAAGCTTCTGAATCGGTGATTTAACATAATTCACAAGCATGATATGTATTTATCTCATGCTAGCTCTTGGGAAAATGGGAATCACTAAGAGATATTAGGATAATCACGATTTCTTAACACGACTTGCTGCATCGAGTGTATATTTTATATGCAACCTCATTGAATAATCTTGTTCTGCAGGTAATTAAAATGCATGTAATTGGATATATTTTGGTATTTGGAGTGCCAACAGTTCTAGGTATGATGAACTTGATGTGGTTCGGGAAGATCGTCAAGGGATTAATGAAAACTATATCGAAAAGGCGATGAGAAACATATTCTTCTGGTTCATATCTCTTCTTCCTCACTTTTCTTGGTCTTTTTCTAAACATCTGCTCATGAGTTAAGGAGAAAAAGGAATTTGATGCTATATAGTGTGTGCGTTGTAAATGGTTCAAAATAACTTAAGAACTTGTAAACATTTTAGCGTCTTCTTCCTCTTTGTCAGATTTATGTACCAATTCATTTTTTTCTCTATAGTTCTTTTTCCTTTTTTTACAACAATGCATACAGATGGAAGAAATGTGAGGATACTGCAGCAATTATTTTTTTGTATTCTGTTATGGTATTTGTTCTCCCTTCCTGA

mRNA sequence

AATAAATAAAGAGTGCTAAAAGTTGATAAATTCATCGGCCAAGGCGCGAAGTTATCATATTTCTTGGGTCATTACTACAAGAATTGGATTGAAAATTCAATTCAATCCACAAGAACACGACGTCCCATCTCTGGACACTCAAATCCATTGCTGATTAGCAAAACCCCACTTGCAATTTCACCATTTTCCCCTTATTGATATTGTTCGCAATTTCTCTTCATCTTGTCGCGATTACCCTTTTAGAATCTTGCGGTTGGAGATTCCTAACGCTTCACATTGATTAAACCTCACGGTTCTTCATCTTTTGCACCACCCGTCGGTTGTTGCATTTCCCTTTACACATTACCTTATTTTGTTCATCTTTGAAAAAGGGCGAACCCCAAATCTTCTGCATCTCACTCGTGATCTGGGGTTTTCATTTTTGAGCGATGCAACATGGAGTGCGGGAGCACATAGTTAATTCAGTCTAAGGTACAGCGATTTTCCGAAGGTTATGTAGTGAAACAAAACAATGGCAAGATCTTTGAAGACTGTAATGGCTATTAAGTCTTACCAAAGTCAAGCTGATGCATTAGTGAAGCACTACTTATTAGCAGACCGTTTGATCCCATACACCTCTGTCCTCGGAGGCATGCTTGCTTGTAAATTGGTCTATGATCTTACTCAATTAGTTAGCAATTCTTCCATCAAGAGTTATCTGGGTCTTACAAAAATCCAACGAGTTGAGTGGAATAACCGCGGCATGTCCACTATTCATGCAATCTATATCTCAATTATGTCATTGTACTTCGTTTTCTGGTCAGATCTCTTCTCTGACCAGCGTCATGCTGGCTTTGTTACCTTTCAAAGTTCAACATTGTCTACTTTCACATTGGGGATTTCAGTTGGATACTTCTTGGCAGATCTTGGATTGATTGTTTGGCTGTACCCTTCTTTAGGTGGGATGGAGTATGTTGTGCATCATTCTCTTTCTGGACTAGCAGTAGCATATTCTGTTTTTTCTGGAGAAGGGCAACTCTATACATATATGGTCCTCATTTCGGAGATTACGACTCCTGAGATTAATATGAGATGGTTTCTTGATACAGCTGGTATGAAGAGGTCCTGTGCATATCTGATTAATGGCATTGTAATATTTTTTGCGTGGCTGGTTGCTCGCATATTGCTGTTTGGTTACACATTCTATCATGTTTACCTGCACTATGATCAGGTAATTAAAATGCATGTAATTGGATATATTTTGGTATTTGGAGTGCCAACAGTTCTAGGTATGATGAACTTGATGTGGTTCGGGAAGATCGTCAAGGGATTAATGAAAACTATATCGAAAAGGCGATGAGAAACATATTCTTCTGGTTCATATCTCTTCTTCCTCACTTTTCTTGGTCTTTTTCTAAACATCTGCTCATGAGTTAAGGAGAAAAAGGAATTTGATGCTATATAGTGTGTGCGTTGTAAATGGTTCAAAATAACTTAAGAACTTGTAAACATTTTAGCGTCTTCTTCCTCTTTGTCAGATTTATGTACCAATTCATTTTTTTCTCTATAGTTCTTTTTCCTTTTTTTACAACAATGCATACAGATGGAAGAAATGTGAGGATACTGCAGCAATTATTTTTTTGTATTCTGTTATGGTATTTGTTCTCCCTTCCTGA

Coding sequence (CDS)

ATGGCAAGATCTTTGAAGACTGTAATGGCTATTAAGTCTTACCAAAGTCAAGCTGATGCATTAGTGAAGCACTACTTATTAGCAGACCGTTTGATCCCATACACCTCTGTCCTCGGAGGCATGCTTGCTTGTAAATTGGTCTATGATCTTACTCAATTAGTTAGCAATTCTTCCATCAAGAGTTATCTGGGTCTTACAAAAATCCAACGAGTTGAGTGGAATAACCGCGGCATGTCCACTATTCATGCAATCTATATCTCAATTATGTCATTGTACTTCGTTTTCTGGTCAGATCTCTTCTCTGACCAGCGTCATGCTGGCTTTGTTACCTTTCAAAGTTCAACATTGTCTACTTTCACATTGGGGATTTCAGTTGGATACTTCTTGGCAGATCTTGGATTGATTGTTTGGCTGTACCCTTCTTTAGGTGGGATGGAGTATGTTGTGCATCATTCTCTTTCTGGACTAGCAGTAGCATATTCTGTTTTTTCTGGAGAAGGGCAACTCTATACATATATGGTCCTCATTTCGGAGATTACGACTCCTGAGATTAATATGAGATGGTTTCTTGATACAGCTGGTATGAAGAGGTCCTGTGCATATCTGATTAATGGCATTGTAATATTTTTTGCGTGGCTGGTTGCTCGCATATTGCTGTTTGGTTACACATTCTATCATGTTTACCTGCACTATGATCAGGTAATTAAAATGCATGTAATTGGATATATTTTGGTATTTGGAGTGCCAACAGTTCTAGGTATGATGAACTTGATGTGGTTCGGGAAGATCGTCAAGGGATTAATGAAAACTATATCGAAAAGGCGATGA

Protein sequence

MARSLKTVMAIKSYQSQADALVKHYLLADRLIPYTSVLGGMLACKLVYDLTQLVSNSSIKSYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGFVTFQSSTLSTFTLGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEITTPEINMRWFLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVIGYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR

Homology

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BLAST of Sed0017032 vs. NCBI nr
Match: XP_038894770.1 (TLC domain-containing protein 4-like [Benincasa hispida] >XP_038894771.1 TLC domain-containing protein 4-like [Benincasa hispida] >XP_038894772.1 TLC domain-containing protein 4-like [Benincasa hispida] >XP_038894773.1 TLC domain-containing protein 4-like [Benincasa hispida])

HSP 1 Score: 513.5 bits (1321), Expect = 1.2e-141
Identity = 262/274 (95.62%), Postives = 267/274 (97.45%), Query Frame = 0


Query: 1   MARSLKTVMAIKSYQSQADALVKHYLLADRLIPYTSVLGGMLACKLVYDLTQLVSNSSIK 60
           MA SLKTVMAIKSYQSQADALVK+YLLADR +P+TSVLGGMLACKLVYDLTQLVSN   K
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFVPFTSVLGGMLACKLVYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGFVTFQSSTLSTFT 120
           SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAG VTFQSSTLSTF 
Sbjct: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWFLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRW+LDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 275
           GY+LVFGVPTVLGMMNLMWFGKIVKGLMKTISKR
Sbjct: 241 GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 274

[Close]

BLAST of Sed0017032 vs. NCBI nr
Match: XP_023543000.1 (transmembrane protein 56 [Cucurbita pepo subsp. pepo] >XP_023543001.1 transmembrane protein 56 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 511.1 bits (1315), Expect = 5.8e-141
Identity = 261/275 (94.91%), Postives = 266/275 (96.73%), Query Frame = 0


Query: 1   MARSLKTVMAIKSYQSQADALVKHYLLADRLIPYTSVLGGMLACKLVYDLTQLVSNSSIK 60
           MA SLKTVMAIKSYQSQADALVK+YLLADR IPYTSVLGGMLACKLVYDLTQLVSN   K
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFIPYTSVLGGMLACKLVYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGFVTFQSSTLSTFT 120
           SYLGLTKIQRVEWNNRG+STIHAIYISIMSLYFVFWSDLFSDQRHAG +TFQSS LSTF 
Sbjct: 61  SYLGLTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLLTFQSSMLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLI+WLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIIWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWFLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRW+LDTAGMKRSCAYLING VIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR 276
           GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR
Sbjct: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR 275

[Close]

BLAST of Sed0017032 vs. NCBI nr
Match: KAG6573446.1 (TLC domain-containing protein 4-B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 510.8 bits (1314), Expect = 7.5e-141
Identity = 260/275 (94.55%), Postives = 267/275 (97.09%), Query Frame = 0


Query: 1   MARSLKTVMAIKSYQSQADALVKHYLLADRLIPYTSVLGGMLACKLVYDLTQLVSNSSIK 60
           MA SLKTVMAIKSYQSQADALVK+YLLADR IPYTSVLGGMLACKLVYDLTQLVSN   K
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFIPYTSVLGGMLACKLVYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGFVTFQSSTLSTFT 120
           SYLGLTKIQRVEWNNRG+STIHAIYISIMSLYFVFWSDLFSDQRHAG +TFQSSTLSTF 
Sbjct: 61  SYLGLTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLLTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLI+WLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIIWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWFLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRW+LDTAGMKRSCAYLING VIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR 276
           GYILVFGVPT+LG+MNLMWFGKIVKGLMKTISKRR
Sbjct: 241 GYILVFGVPTMLGIMNLMWFGKIVKGLMKTISKRR 275

[Close]

BLAST of Sed0017032 vs. NCBI nr
Match: XP_008459089.1 (PREDICTED: transmembrane protein 56-like [Cucumis melo] >XP_016902371.1 PREDICTED: transmembrane protein 56-like [Cucumis melo] >KAA0043306.1 transmembrane protein 56-like [Cucumis melo var. makuwa] >TYK29370.1 transmembrane protein 56-like [Cucumis melo var. makuwa])

HSP 1 Score: 509.2 bits (1310), Expect = 2.2e-140
Identity = 258/274 (94.16%), Postives = 265/274 (96.72%), Query Frame = 0


Query: 1   MARSLKTVMAIKSYQSQADALVKHYLLADRLIPYTSVLGGMLACKLVYDLTQLVSNSSIK 60
           MA SLKTVMAIKSYQSQADALVK+YLLAD  +P+TSVLGGMLACKL+YDLTQLVSN   K
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLIYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGFVTFQSSTLSTFT 120
           SYLGLTKIQRVEWNNRGMST HAIYISIMSLYFVFWSDLFSDQRHAG VTFQSSTLSTF 
Sbjct: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWFLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRW+LDTAGMKRSCAYLINGIVIFFAWL+ARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 275
           GY+LVFGVPTVLGMMNLMWFGKIVKGLMKTISKR
Sbjct: 241 GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 274

[Close]

BLAST of Sed0017032 vs. NCBI nr
Match: XP_022927472.1 (transmembrane protein 56-like [Cucurbita moschata] >XP_022927473.1 transmembrane protein 56-like [Cucurbita moschata] >XP_023000706.1 transmembrane protein 56-like [Cucurbita maxima] >XP_023000707.1 transmembrane protein 56-like [Cucurbita maxima] >XP_023519749.1 transmembrane protein 56-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 508.4 bits (1308), Expect = 3.7e-140
Identity = 259/274 (94.53%), Postives = 266/274 (97.08%), Query Frame = 0


Query: 1   MARSLKTVMAIKSYQSQADALVKHYLLADRLIPYTSVLGGMLACKLVYDLTQLVSNSSIK 60
           MA SLKTVMAIKSYQSQADALV++YLLADRLIPYTSVLGG+LACKLVYDLTQ+VSN   K
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVENYLLADRLIPYTSVLGGILACKLVYDLTQVVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGFVTFQSSTLSTFT 120
           SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAG VTFQSSTLSTF 
Sbjct: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFV 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWFLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRW+LDTAGMKRSCAYLING+VIFFAWLVARILLFGYTFYHVYLHYDQVIKMH I
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGVVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHAI 240

Query: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 275
           GY+LVFGVPTVLGMMNLMWFGKI KGLMKTISKR
Sbjct: 241 GYLLVFGVPTVLGMMNLMWFGKIGKGLMKTISKR 274

[Close]

BLAST of Sed0017032 vs. ExPASy Swiss-Prot
Match: Q8CGF5 (TLC domain-containing protein 4 OS=Mus musculus OX=10090 GN=Tlcd4 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 8.7e-15
Identity = 60/215 (27.91%), Postives = 112/215 (52.09%), Query Frame = 0


Query: 62  YLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGFVTFQSSTLSTFTL 121
           Y  L+  +++EWN+R +ST H++ + I  LY  F+ +        G  T+ +  ++T   
Sbjct: 51  YNSLSIDKKIEWNSRVVSTCHSLLVGIFGLYLFFFDEATITDPLWGDPTYVNINIAT--- 110

Query: 122 GISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLY-TYMVLISEIT 181
             + GY ++DL +I++ +  +G   +++HH  +GL   Y V +     Y     L++E++
Sbjct: 111 --ASGYLISDLLIILFNWKVIGDKFFIIHH-CAGLTAYYFVLTTGALAYIANFRLLAELS 170

Query: 182 TPEINMRWFLDTAGM-KRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHY--DQVIKM 241
           +P +N RWF +     K S A +INGI++   + + RI+     ++ +Y  Y  +  I+ 
Sbjct: 171 SPFVNQRWFFEALKYPKFSKANVINGILMTVVFFIVRIISIPPMYFFLYSVYGTEPYIRF 230

Query: 242 HVIGYILVFGVPTVLGMMNLMWFGKIVKGLMKTIS 273
             +   +      +L +MN+MW  KI KG +K IS
Sbjct: 231 GFVIQSVWIVTCVILDVMNIMWMIKITKGCIKVIS 259

[Close]

BLAST of Sed0017032 vs. ExPASy Swiss-Prot
Match: Q6PGS5 (TLC domain-containing protein 4-B OS=Xenopus laevis OX=8355 GN=tlcd4-b PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.5e-14
Identity = 61/215 (28.37%), Postives = 109/215 (50.70%), Query Frame = 0


Query: 65  LTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGFVTFQSSTLSTFTLGIS 124
           L+  Q++EWN+R +S+ HA+ +    LY + + D  +     G        +    + ++
Sbjct: 41  LSARQKIEWNSRTVSSFHALVVGCFCLYILVYDDAVNADPVWG-----DPFMVKLNVAVT 100

Query: 125 VGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQL--YTYMVLISEITTP 184
            GY ++DL LI++ +  +G   +V HH L+ L   Y V  GEG L  +    LI+E +TP
Sbjct: 101 SGYLISDLLLIIYYWKEIGDKYFVTHH-LAALYACYYVL-GEGMLPYFGNFRLIAEFSTP 160

Query: 185 EINMRWFLDTAG-MKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHY-DQVIKMHVI 244
            +N RWF +  G  K S   ++NG+++  ++ + RI +    +  V+  +  +      +
Sbjct: 161 FVNQRWFFEVLGYSKYSLPNMVNGVLMTISFFIVRIAVIPIYYGRVFSTFGTEAFHRLGL 220

Query: 245 GYILVFGVPTV-LGMMNLMWFGKIVKGLMKTISKR 275
           G    + + +V L +MN+MW  KI KG  K +  R
Sbjct: 221 GAQCAWIISSVSLDIMNVMWMIKIAKGCYKVLYHR 248

[Close]

BLAST of Sed0017032 vs. ExPASy Swiss-Prot
Match: Q96MV1 (TLC domain-containing protein 4 OS=Homo sapiens OX=9606 GN=TLCD4 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.6e-14
Identity = 66/234 (28.21%), Postives = 117/234 (50.00%), Query Frame = 0


Query: 46  LVYDLTQLVSNSSIKSYLGLTKIQRVEWNNRGMSTIHAIYISIMSLY-FVFWSDLFSDQR 105
           L Y ++   S      +  L+  +++EWN+R +ST H++ + I  LY F+F     +D  
Sbjct: 22  LFYFVSYWFSAKVSPGFNSLSFKKKIEWNSRVVSTCHSLVVGIFGLYIFLFDEATKADPL 81

Query: 106 HAGFVTFQSSTLSTFTLGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFS 165
             G       +L+   + I+ GY ++DL +I+  +  +G   +++HH  S  A    + +
Sbjct: 82  WGG------PSLANVNIAIASGYLISDLSIIILYWKVIGDKFFIMHHCASLYAYYLVLKN 141

Query: 166 GEGQLYTYMVLISEITTPEINMRWFLDTAGM-KRSCAYLINGIVIFFAWLVARI--LLFG 225
           G         L++E+++P +N RWF +     K S A +INGI++   + + RI  +L  
Sbjct: 142 GVLAYIGNFRLLAELSSPFVNQRWFFEALKYPKFSKAIVINGILMTVVFFIVRIASMLPH 201

Query: 226 YTFYHVYLHYDQVIKMHVIGYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR 276
           Y F +     +  I++ V+  +       VL +MN+MW  KI KG +K IS  R
Sbjct: 202 YGFMYSVYGTEPYIRLGVLIQLSWVISCVVLDVMNVMWMIKISKGCIKVISHIR 249

[Close]

BLAST of Sed0017032 vs. ExPASy Swiss-Prot
Match: Q5XIY2 (TLC domain-containing protein 4-B OS=Danio rerio OX=7955 GN=tlcd4b PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 9.0e-12
Identity = 58/240 (24.17%), Postives = 117/240 (48.75%), Query Frame = 0


Query: 37  VLGGMLACKLVYD-LTQLVSNSSIKSYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVF 96
           V G  +  +L +  ++ ++S++  + Y  L   +  +WN+R +ST+HA+ + +  LY ++
Sbjct: 9   VAGSFVGFQLFFSCVSPVLSSNFTQGYGKLPPNKLNDWNSRLVSTVHALIVGLFCLYILW 68

Query: 97  WSDLFSDQRHAGFVTFQSSTLSTFTLGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSG 156
           + D  ++    G        L    + I+ GY   DL L+   + ++G + +V HH  + 
Sbjct: 69  YDDAVNEDPVWG-----DPNLVKLNVAITCGYLFYDLLLLACNWSTMGDVFFVCHHLAAL 128

Query: 157 LAVAYSVFSGEGQLYTYMVLISEITTPEINMRWFLDTAGMKRSCAYLI-NGIVIFFAWLV 216
            A  Y +  G    +    LISE++TP +N RWF +     R+   ++ NGI +   + +
Sbjct: 129 YAYGYVLTRGVLPYFANFRLISELSTPFVNQRWFFEALAYPRTHQLVVANGIAMAVVFFL 188

Query: 217 ARILLFGYTFYHVY-LHYDQVIKMHVIGYILVFGVPTV-LGMMNLMWFGKIVKGLMKTIS 273
            RI +    +  V+ + Y    +   +   + + +  V L ++N++W  KI +G  K I+
Sbjct: 189 VRIAVMPPYWAKVFGIIYSPTFEKLGLAIQVAWIISCVCLDILNIIWMYKIARGCYKVIT 243

[Close]

BLAST of Sed0017032 vs. ExPASy Swiss-Prot
Match: Q6GLX2 (TLC domain-containing protein 4-A OS=Xenopus laevis OX=8355 GN=tlcd4-a PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.4e-11
Identity = 61/250 (24.40%), Postives = 111/250 (44.40%), Query Frame = 0


Query: 29  DRLIPYTSVLGGMLACKLVYD-LTQLVSNSSIKSYLGLTKIQRVEWNNRGMSTIHAIYIS 88
           D LI Y  V G  L  +L++  ++  +      +Y  L+  ++ EW++R +ST HA+ + 
Sbjct: 3   DVLISYCVVTGSFLGFQLLFSAISPRLFTKYSSTYRQLSFGKQCEWDSRFVSTNHALIVG 62

Query: 89  IMSLYFVFWSDLFSDQRHAGFVTFQSSTLSTFTLGISVGYFLADLGLIVWLYPSLGGMEY 148
              LY + + D  +     G             + I+ GY + DL L+   +  +     
Sbjct: 63  SACLYILAYDDAVNADPIWG-----DPFWVKMNVAITCGYLVQDLLLLARFWKVMRDPYM 122

Query: 149 VVHHSLSGLAVAYSVFSGEGQLYTYMVLISEITTPEINMRWFLDTAGMKRSC-AYLINGI 208
           V HH     +  Y +  G    +    LISE++TP +N RWF D  G  RS    L+NG+
Sbjct: 123 VCHHLAVFYSYGYVLNRGVLPYFANFRLISELSTPFVNQRWFFDVIGKPRSSWPVLLNGL 182

Query: 209 VIFFAWLVARILLFGYTFYHVYLHY--DQVIKMHVIGYILVFGVPTVLGMMNLMWFGKIV 268
            +   + + RI +    +  V+  +  +  I++ +   +       VL ++N+ W  KI 
Sbjct: 183 AMALVFFIVRIAVIPSYYSQVFATFGTEGYIRLGIGPQVAWIVSCVVLDILNVFWMYKIA 242

Query: 269 KGLMKTISKR 275
           +G  K +  +
Sbjct: 243 RGFYKVVKAK 247

[Close]

BLAST of Sed0017032 vs. ExPASy TrEMBL
Match: A0A1S4E2B6 (transmembrane protein 56-like OS=Cucumis melo OX=3656 GN=LOC103498304 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.1e-140
Identity = 258/274 (94.16%), Postives = 265/274 (96.72%), Query Frame = 0


Query: 1   MARSLKTVMAIKSYQSQADALVKHYLLADRLIPYTSVLGGMLACKLVYDLTQLVSNSSIK 60
           MA SLKTVMAIKSYQSQADALVK+YLLAD  +P+TSVLGGMLACKL+YDLTQLVSN   K
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLIYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGFVTFQSSTLSTFT 120
           SYLGLTKIQRVEWNNRGMST HAIYISIMSLYFVFWSDLFSDQRHAG VTFQSSTLSTF 
Sbjct: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWFLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRW+LDTAGMKRSCAYLINGIVIFFAWL+ARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 275
           GY+LVFGVPTVLGMMNLMWFGKIVKGLMKTISKR
Sbjct: 241 GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 274

[Close]

BLAST of Sed0017032 vs. ExPASy TrEMBL
Match: A0A5D3E1H6 (Transmembrane protein 56-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00960 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.1e-140
Identity = 258/274 (94.16%), Postives = 265/274 (96.72%), Query Frame = 0


Query: 1   MARSLKTVMAIKSYQSQADALVKHYLLADRLIPYTSVLGGMLACKLVYDLTQLVSNSSIK 60
           MA SLKTVMAIKSYQSQADALVK+YLLAD  +P+TSVLGGMLACKL+YDLTQLVSN   K
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLIYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGFVTFQSSTLSTFT 120
           SYLGLTKIQRVEWNNRGMST HAIYISIMSLYFVFWSDLFSDQRHAG VTFQSSTLSTF 
Sbjct: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWFLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRW+LDTAGMKRSCAYLINGIVIFFAWL+ARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 275
           GY+LVFGVPTVLGMMNLMWFGKIVKGLMKTISKR
Sbjct: 241 GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 274

[Close]

BLAST of Sed0017032 vs. ExPASy TrEMBL
Match: A0A6J1KGK7 (transmembrane protein 56-like OS=Cucurbita maxima OX=3661 GN=LOC111495071 PE=4 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 1.8e-140
Identity = 259/274 (94.53%), Postives = 266/274 (97.08%), Query Frame = 0


Query: 1   MARSLKTVMAIKSYQSQADALVKHYLLADRLIPYTSVLGGMLACKLVYDLTQLVSNSSIK 60
           MA SLKTVMAIKSYQSQADALV++YLLADRLIPYTSVLGG+LACKLVYDLTQ+VSN   K
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVENYLLADRLIPYTSVLGGILACKLVYDLTQVVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGFVTFQSSTLSTFT 120
           SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAG VTFQSSTLSTF 
Sbjct: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFV 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWFLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRW+LDTAGMKRSCAYLING+VIFFAWLVARILLFGYTFYHVYLHYDQVIKMH I
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGVVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHAI 240

Query: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 275
           GY+LVFGVPTVLGMMNLMWFGKI KGLMKTISKR
Sbjct: 241 GYLLVFGVPTVLGMMNLMWFGKIGKGLMKTISKR 274

[Close]

BLAST of Sed0017032 vs. ExPASy TrEMBL
Match: A0A6J1EH94 (transmembrane protein 56-like OS=Cucurbita moschata OX=3662 GN=LOC111434291 PE=4 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 1.8e-140
Identity = 259/274 (94.53%), Postives = 266/274 (97.08%), Query Frame = 0


Query: 1   MARSLKTVMAIKSYQSQADALVKHYLLADRLIPYTSVLGGMLACKLVYDLTQLVSNSSIK 60
           MA SLKTVMAIKSYQSQADALV++YLLADRLIPYTSVLGG+LACKLVYDLTQ+VSN   K
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVENYLLADRLIPYTSVLGGILACKLVYDLTQVVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGFVTFQSSTLSTFT 120
           SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAG VTFQSSTLSTF 
Sbjct: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFV 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWFLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRW+LDTAGMKRSCAYLING+VIFFAWLVARILLFGYTFYHVYLHYDQVIKMH I
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGVVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHAI 240

Query: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 275
           GY+LVFGVPTVLGMMNLMWFGKI KGLMKTISKR
Sbjct: 241 GYLLVFGVPTVLGMMNLMWFGKIGKGLMKTISKR 274

[Close]

BLAST of Sed0017032 vs. ExPASy TrEMBL
Match: A0A6J1K6A0 (transmembrane protein 56-like OS=Cucurbita maxima OX=3661 GN=LOC111490462 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 4.0e-140
Identity = 260/275 (94.55%), Postives = 266/275 (96.73%), Query Frame = 0


Query: 1   MARSLKTVMAIKSYQSQADALVKHYLLADRLIPYTSVLGGMLACKLVYDLTQLVSNSSIK 60
           MA SLKTVMAIKSYQSQADALVK+YLLADR IPYTSVLGGMLACKLVYDLTQLVSN   K
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFIPYTSVLGGMLACKLVYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGFVTFQSSTLSTFT 120
           SYLGLTKIQRVEWNNRG+STIHAIYISIMSLYFVFWSDLFSDQRHAG +TFQSSTLSTF 
Sbjct: 61  SYLGLTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLLTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLI++LYPSLGGMEYVVHHSLSGLAVAYSV SGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIIFLYPSLGGMEYVVHHSLSGLAVAYSVLSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWFLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRW+LDTAGMKRSCAYLING VIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR 276
           GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR
Sbjct: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR 275

[Close]

BLAST of Sed0017032 vs. TAIR 10
Match: AT1G31300.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 404.8 bits (1039), Expect = 5.4e-113
Identity = 197/271 (72.69%), Postives = 235/271 (86.72%), Query Frame = 0


Query: 4   SLKTVMAIKSYQSQADALVKHYLLADRLIPYTSVLGGMLACKLVYDLTQLVSNSSIKSYL 63
           SL+T+ AIKSY  QA  LVK+YLLAD  IPYTSVL G+  CK+VYDL   +SNS  K+Y+
Sbjct: 5   SLQTIGAIKSYHHQAQHLVKNYLLADPFIPYTSVLTGIFLCKVVYDLCHFISNSHSKTYI 64

Query: 64  GLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGFVTFQSSTLSTFTLGI 123
            LTKIQR+EWNNRG+ST+HAI+IS MSLYFVFWSDLFSD+ H   V F+SS LS+  LGI
Sbjct: 65  ILTKIQRIEWNNRGISTVHAIFISAMSLYFVFWSDLFSDRWHNDLVVFRSSRLSSLGLGI 124

Query: 124 SVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEITTPE 183
           S+GYFLADLG+I W YPSLGG+EY+VHHSLSG+AVAYS+FSGEGQLYTYMVLISEITTPE
Sbjct: 125 SIGYFLADLGMIFWKYPSLGGIEYIVHHSLSGVAVAYSLFSGEGQLYTYMVLISEITTPE 184

Query: 184 INMRWFLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVIGYI 243
           IN+RW+LDTAGMK+S AY++NG+ IF AWLVARILLF Y FYHVYLHY+QV++MH+ GY+
Sbjct: 185 INLRWYLDTAGMKKSLAYVVNGVFIFLAWLVARILLFIYMFYHVYLHYNQVMRMHIFGYV 244

Query: 244 LVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 275
           LVFGVP  LG+MNL+WFGKIV+G+ KT++KR
Sbjct: 245 LVFGVPAALGVMNLIWFGKIVRGVKKTLAKR 275

[Close]

BLAST of Sed0017032 vs. TAIR 10
Match: AT1G31300.2 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 404.8 bits (1039), Expect = 5.4e-113
Identity = 197/271 (72.69%), Postives = 235/271 (86.72%), Query Frame = 0


Query: 4   SLKTVMAIKSYQSQADALVKHYLLADRLIPYTSVLGGMLACKLVYDLTQLVSNSSIKSYL 63
           SL+T+ AIKSY  QA  LVK+YLLAD  IPYTSVL G+  CK+VYDL   +SNS  K+Y+
Sbjct: 5   SLQTIGAIKSYHHQAQHLVKNYLLADPFIPYTSVLTGIFLCKVVYDLCHFISNSHSKTYI 64

Query: 64  GLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGFVTFQSSTLSTFTLGI 123
            LTKIQR+EWNNRG+ST+HAI+IS MSLYFVFWSDLFSD+ H   V F+SS LS+  LGI
Sbjct: 65  ILTKIQRIEWNNRGISTVHAIFISAMSLYFVFWSDLFSDRWHNDLVVFRSSRLSSLGLGI 124

Query: 124 SVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEITTPE 183
           S+GYFLADLG+I W YPSLGG+EY+VHHSLSG+AVAYS+FSGEGQLYTYMVLISEITTPE
Sbjct: 125 SIGYFLADLGMIFWKYPSLGGIEYIVHHSLSGVAVAYSLFSGEGQLYTYMVLISEITTPE 184

Query: 184 INMRWFLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVIGYI 243
           IN+RW+LDTAGMK+S AY++NG+ IF AWLVARILLF Y FYHVYLHY+QV++MH+ GY+
Sbjct: 185 INLRWYLDTAGMKKSLAYVVNGVFIFLAWLVARILLFIYMFYHVYLHYNQVMRMHIFGYV 244

Query: 244 LVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 275
           LVFGVP  LG+MNL+WFGKIV+G+ KT++KR
Sbjct: 245 LVFGVPAALGVMNLIWFGKIVRGVKKTLAKR 275

[Close]

BLAST of Sed0017032 vs. TAIR 10
Match: AT4G19645.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 384.8 bits (987), Expect = 5.8e-107
Identity = 191/268 (71.27%), Postives = 226/268 (84.33%), Query Frame = 0


Query: 9   MAIKSYQSQADALVKHYLLADRLIPYTSVLGGMLACKLVYDLTQLVSNSSIKSYLGLTKI 68
           M IKSYQ+QA+  V+HYLLAD  +PYTSVL G+  CKLVYDLT+L S+  +KSY  LTKI
Sbjct: 1   MEIKSYQNQAEYFVEHYLLADPFLPYTSVLVGICLCKLVYDLTELFSSIHVKSYSALTKI 60

Query: 69  QRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGFVT-FQSSTLSTFTLGISVGY 128
           +R+EWNNRG+ST+HAI+IS M+LYF F+SDLFSDQR    +T F++S LSTF LG+SVGY
Sbjct: 61  KRIEWNNRGISTVHAIFISFMALYFAFFSDLFSDQRSLETLTVFRNSPLSTFGLGVSVGY 120

Query: 129 FLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEITTPEINMR 188
           FLADLG+I WLYPSLGG EY++HH LSG AVAYS+FSGE QLYTYMVLISE+TTPEIN+R
Sbjct: 121 FLADLGMIFWLYPSLGGSEYILHHCLSGTAVAYSLFSGEAQLYTYMVLISEVTTPEINLR 180

Query: 189 WFLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVIGYILVFG 248
           W+LD AG+KRS AYL+NG+ IFFAWL ARILLF Y FYHVY HYDQVI+MH  GY+LVF 
Sbjct: 181 WYLDIAGLKRSKAYLVNGVAIFFAWLTARILLFIYMFYHVYTHYDQVIEMHTFGYLLVFV 240

Query: 249 VPTVLGMMNLMWFGKIVKGLMKTISKRR 276
           VP  L +MNL+WFGKIVKGL KT+ KR+
Sbjct: 241 VPISLSVMNLIWFGKIVKGLKKTLEKRQ 268

[Close]

BLAST of Sed0017032 vs. TAIR 10
Match: AT4G19645.2 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 384.8 bits (987), Expect = 5.8e-107
Identity = 191/268 (71.27%), Postives = 226/268 (84.33%), Query Frame = 0


Query: 9   MAIKSYQSQADALVKHYLLADRLIPYTSVLGGMLACKLVYDLTQLVSNSSIKSYLGLTKI 68
           M IKSYQ+QA+  V+HYLLAD  +PYTSVL G+  CKLVYDLT+L S+  +KSY  LTKI
Sbjct: 1   MEIKSYQNQAEYFVEHYLLADPFLPYTSVLVGICLCKLVYDLTELFSSIHVKSYSALTKI 60

Query: 69  QRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGFVT-FQSSTLSTFTLGISVGY 128
           +R+EWNNRG+ST+HAI+IS M+LYF F+SDLFSDQR    +T F++S LSTF LG+SVGY
Sbjct: 61  KRIEWNNRGISTVHAIFISFMALYFAFFSDLFSDQRSLETLTVFRNSPLSTFGLGVSVGY 120

Query: 129 FLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEITTPEINMR 188
           FLADLG+I WLYPSLGG EY++HH LSG AVAYS+FSGE QLYTYMVLISE+TTPEIN+R
Sbjct: 121 FLADLGMIFWLYPSLGGSEYILHHCLSGTAVAYSLFSGEAQLYTYMVLISEVTTPEINLR 180

Query: 189 WFLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVIGYILVFG 248
           W+LD AG+KRS AYL+NG+ IFFAWL ARILLF Y FYHVY HYDQVI+MH  GY+LVF 
Sbjct: 181 WYLDIAGLKRSKAYLVNGVAIFFAWLTARILLFIYMFYHVYTHYDQVIEMHTFGYLLVFV 240

Query: 249 VPTVLGMMNLMWFGKIVKGLMKTISKRR 276
           VP  L +MNL+WFGKIVKGL KT+ KR+
Sbjct: 241 VPISLSVMNLIWFGKIVKGLKKTLEKRQ 268

[Close]

BLAST of Sed0017032 vs. TAIR 10
Match: AT4G10360.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 240.7 bits (613), Expect = 1.4e-63
Identity = 119/251 (47.41%), Postives = 169/251 (67.33%), Query Frame = 0


Query: 25  YLLADRLIPYTSVLGGMLACKLVYDLTQLVSNSSIKSYLGLTKIQRVEWNNRGMSTIHAI 84
           ++ + +L+   S+  G L CK+VYDLT+ +S      Y  L    R+EWNNRG ST HA+
Sbjct: 9   FVSSRQLLLLASICSGALMCKIVYDLTRFISPLLFSVYGKLDSKVRMEWNNRGFSTFHAV 68

Query: 85  YISIMSLYFVFWSDLFSDQRHAGFVTFQSSTLSTFTLGISVGYFLADLGLIVWLYPSLGG 144
           + S+ S+YF+  SD F +  H   V   ++ LS   +GIS+GYFLADL +I W +P+LGG
Sbjct: 69  FTSVASIYFLVISDQFDENVHGDSVINSTTRLSESVMGISLGYFLADLAMIFWYFPTLGG 128

Query: 145 MEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEITTPEINMRWFLDTAGMKRSCAYLIN 204
           +EYV HH LS  A+  SV SG+ Q Y ++VL+SE TTP +N+RW+LD +G K S AY +N
Sbjct: 129 IEYVFHHFLSMFAIILSVTSGQSQFYIFLVLLSEATTPFVNLRWYLDNSGQKGSKAYTLN 188

Query: 205 GIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVIGYILVFGVPTVLGMMNLMWFGKIV 264
           GI +F  WLVAR+LLF + F H+YLH+ QV ++  +G+  +  +P  L +MNL+WF KI 
Sbjct: 189 GIALFLGWLVARVLLFIFFFVHMYLHFHQVKQVFPLGFYSLLTIPPALAVMNLLWFWKIT 248

Query: 265 KGLMKTISKRR 276
           KGL+KT+SK +
Sbjct: 249 KGLIKTLSKAK 259

The following BLAST results are available for this feature:

BLAST of Sed0017032 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894770.1	1.2e-141	95.62	TLC domain-containing protein 4-like [Benincasa hispida] >XP_038894771.1 TLC dom...	[more]
XP_023543000.1	5.8e-141	94.91	transmembrane protein 56 [Cucurbita pepo subsp. pepo] >XP_023543001.1 transmembr...	[more]
KAG6573446.1	7.5e-141	94.55	TLC domain-containing protein 4-B, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008459089.1	2.2e-140	94.16	PREDICTED: transmembrane protein 56-like [Cucumis melo] >XP_016902371.1 PREDICTE...	[more]
XP_022927472.1	3.7e-140	94.53	transmembrane protein 56-like [Cucurbita moschata] >XP_022927473.1 transmembrane...	[more]

BLAST of Sed0017032 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8CGF5	8.7e-15	27.91	TLC domain-containing protein 4 OS=Mus musculus OX=10090 GN=Tlcd4 PE=2 SV=1	[more]
Q6PGS5	2.5e-14	28.37	TLC domain-containing protein 4-B OS=Xenopus laevis OX=8355 GN=tlcd4-b PE=2 SV=1	[more]
Q96MV1	5.6e-14	28.21	TLC domain-containing protein 4 OS=Homo sapiens OX=9606 GN=TLCD4 PE=1 SV=1	[more]
Q5XIY2	9.0e-12	24.17	TLC domain-containing protein 4-B OS=Danio rerio OX=7955 GN=tlcd4b PE=2 SV=1	[more]
Q6GLX2	3.4e-11	24.40	TLC domain-containing protein 4-A OS=Xenopus laevis OX=8355 GN=tlcd4-a PE=2 SV=1	[more]

BLAST of Sed0017032 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E2B6	1.1e-140	94.16	transmembrane protein 56-like OS=Cucumis melo OX=3656 GN=LOC103498304 PE=4 SV=1	[more]
A0A5D3E1H6	1.1e-140	94.16	Transmembrane protein 56-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A6J1KGK7	1.8e-140	94.53	transmembrane protein 56-like OS=Cucurbita maxima OX=3661 GN=LOC111495071 PE=4 S...	[more]
A0A6J1EH94	1.8e-140	94.53	transmembrane protein 56-like OS=Cucurbita moschata OX=3662 GN=LOC111434291 PE=4...	[more]
A0A6J1K6A0	4.0e-140	94.55	transmembrane protein 56-like OS=Cucurbita maxima OX=3661 GN=LOC111490462 PE=4 S...	[more]

BLAST of Sed0017032 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31300.1	5.4e-113	72.69	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT1G31300.2	5.4e-113	72.69	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT4G19645.1	5.8e-107	71.27	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT4G19645.2	5.8e-107	71.27	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT4G10360.1	1.4e-63	47.41	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006634	TRAM/LAG1/CLN8 homology domain	SMART	SM00724	lag1_27	coord: 68..266 e-value: 1.9E-19 score: 80.6
IPR006634	TRAM/LAG1/CLN8 homology domain	PFAM	PF03798	TRAM_LAG1_CLN8	coord: 72..239 e-value: 4.4E-26 score: 91.9
IPR006634	TRAM/LAG1/CLN8 homology domain	PROSITE	PS50922	TLC	coord: 68..268 score: 26.33267
None	No IPR available	PANTHER	PTHR13439:SF62	OS01G0768200 PROTEIN	coord: 6..236
None	No IPR available	PANTHER	PTHR13439	CT120 PROTEIN	coord: 6..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017032.1	Sed0017032.1	mRNA
Sed0017032.2	Sed0017032.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055088	lipid homeostasis
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004190	aspartic-type endopeptidase activity