Sed0016975 (gene) Chayote v1

Overview


Name	Sed0016975
Type	gene
Organism	Sechium edule (Chayote v1)
Description	SAUR-like auxin-responsive protein family
Location	LG13: 21055659 .. 21056383 (-)
RNA-Seq Expression	Sed0016975
Synteny	Sed0016975

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAGAAGGTAAAGTAAAATGAGTAGAGGGGCCAAGTTGTGGAAGAGAAGAGTAGCATTAAGGTGGGGGCTCCAAACACTCTGTTTTTCTCCCTCCATAAATACCCCTCCAAATCCCAATTCCAATCTCATCTTTTCCCCCACAAAAAAATGGCCTTGAAAAAGTCCCAAACCACCACCCTAAAGCAGATCCTCAAGCACTGTTCCAGCCTGGGCCGGAAAAACCAGCACCATTTCGACGAGCACGGCCTCCCGTTAGACGTCCCGAAAGGCCATTTCGCGGTCTACGTCGGCCACAACCGAACCAGGTTCATAATCCCAATCACATTCCTCAACCACCCCCAGTTCCAAATCTTGCTCCAACAAGCCGCGGATGAATTCGGGTTCGATCACGACATGGGCCTCACCATTCCTTGCGATGAACTCTTCTTTCAGTCCCTTGCTTCCACTCTGCGATGACTTCCAAACCCCGCCCCTCCATGAAGTTGGAATCGCTAGCAATCCTCGGTCAGCCCCGGTTCTCTCTCTTTTTTTTAGAGAAATTTGGGTCATCTAAATTATCTAAATTTTCATGCTCATGTCCCTCAATTTGGATCACACTACCACTCAAATTAGACGACATAGGTGGACATGAAAATTTAGGTTGCATGACCTATTTTCTTTTTTCTAATTATTTTATAGGGTAGATCCATACCTTTTCTTTTTCTTTTTCTTTTTTGCCAACCCC

mRNA sequence

GTAGAAGGTAAAGTAAAATGAGTAGAGGGGCCAAGTTGTGGAAGAGAAGAGTAGCATTAAGGTGGGGGCTCCAAACACTCTGTTTTTCTCCCTCCATAAATACCCCTCCAAATCCCAATTCCAATCTCATCTTTTCCCCCACAAAAAAATGGCCTTGAAAAAGTCCCAAACCACCACCCTAAAGCAGATCCTCAAGCACTGTTCCAGCCTGGGCCGGAAAAACCAGCACCATTTCGACGAGCACGGCCTCCCGTTAGACGTCCCGAAAGGCCATTTCGCGGTCTACGTCGGCCACAACCGAACCAGGTTCATAATCCCAATCACATTCCTCAACCACCCCCAGTTCCAAATCTTGCTCCAACAAGCCGCGGATGAATTCGGGTTCGATCACGACATGGGCCTCACCATTCCTTGCGATGAACTCTTCTTTCAGTCCCTTGCTTCCACTCTGCGATGACTTCCAAACCCCGCCCCTCCATGAAGTTGGAATCGCTAGCAATCCTCGGTCAGCCCCGGTTCTCTCTCTTTTTTTTAGAGAAATTTGGGTCATCTAAATTATCTAAATTTTCATGCTCATGTCCCTCAATTTGGATCACACTACCACTCAAATTAGACGACATAGGTGGACATGAAAATTTAGGTTGCATGACCTATTTTCTTTTTTCTAATTATTTTATAGGGTAGATCCATACCTTTTCTTTTTCTTTTTCTTTTTTGCCAACCCC

Coding sequence (CDS)

ATGGCCTTGAAAAAGTCCCAAACCACCACCCTAAAGCAGATCCTCAAGCACTGTTCCAGCCTGGGCCGGAAAAACCAGCACCATTTCGACGAGCACGGCCTCCCGTTAGACGTCCCGAAAGGCCATTTCGCGGTCTACGTCGGCCACAACCGAACCAGGTTCATAATCCCAATCACATTCCTCAACCACCCCCAGTTCCAAATCTTGCTCCAACAAGCCGCGGATGAATTCGGGTTCGATCACGACATGGGCCTCACCATTCCTTGCGATGAACTCTTCTTTCAGTCCCTTGCTTCCACTCTGCGATGA

Protein sequence

MALKKSQTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR

Homology

[Close]

BLAST of Sed0016975 vs. NCBI nr
Match: XP_023535895.1 (auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 167.2 bits (422), Expect = 7.6e-38
Identity = 78/100 (78.00%), Postives = 86/100 (86.00%), Query Frame = 0


Query: 4   KKSQTTTLKQILKHCSSLGRKNQHHFDE-HGLPLDVPKGHFAVYVGHNRTRFIIPITFLN 63
           K  QT  LKQ++K CSS+GRK  HH+D+  GLPLDVPKGHF VYVG NR+R+I+PITFLN
Sbjct: 5   KMPQTAVLKQMIKRCSSMGRKQHHHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLN 64

Query: 64  HPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR 103
           HPQFQILLQQAADEFGFDHDMGLTIPCDE  FQSL STLR
Sbjct: 65  HPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTLR 104

[Close]

BLAST of Sed0016975 vs. NCBI nr
Match: XP_022941161.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata] >XP_022980903.1 auxin-responsive protein SAUR50-like [Cucurbita maxima] >XP_023525369.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 167.2 bits (422), Expect = 7.6e-38
Identity = 82/106 (77.36%), Postives = 90/106 (84.91%), Query Frame = 0


Query: 1   MALKKS----QTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFII 60
           MA++KS    QT  LKQ+LK CSSLG+K Q  +DE GLPLDVPKGHF VYVG NR+R I+
Sbjct: 1   MAIRKSTKMPQTAVLKQMLKRCSSLGKK-QQQYDEQGLPLDVPKGHFVVYVGENRSRHIV 60

Query: 61  PITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR 103
           PIT+LNHPQFQILLQQAADEFGFDHDMGLTIPCDE FFQSL STLR
Sbjct: 61  PITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR 105

[Close]

BLAST of Sed0016975 vs. NCBI nr
Match: KAG6608586.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 165.6 bits (418), Expect = 2.2e-37
Identity = 79/99 (79.80%), Postives = 85/99 (85.86%), Query Frame = 0


Query: 4   KKSQTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNH 63
           K  QT  LKQ+LK CSSLG+K Q  +DE GLPLDVPKGHF VYVG NR+R I+PIT+LNH
Sbjct: 8   KMPQTAVLKQMLKRCSSLGKK-QQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNH 67

Query: 64  PQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR 103
           PQFQILLQQAADEFGFDHDMGLTIPCDE FFQSL STLR
Sbjct: 68  PQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR 105

[Close]

BLAST of Sed0016975 vs. NCBI nr
Match: XP_022937029.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata] >XP_022975872.1 auxin-responsive protein SAUR50-like [Cucurbita maxima] >KAG6591277.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 164.1 bits (414), Expect = 6.4e-37
Identity = 77/100 (77.00%), Postives = 85/100 (85.00%), Query Frame = 0


Query: 4   KKSQTTTLKQILKHCSSLGRKNQHHFDE-HGLPLDVPKGHFAVYVGHNRTRFIIPITFLN 63
           K  QT  LKQ++K CSS+GRK   H+D+  GLPLDVPKGHF VYVG NR+R+I+PITFLN
Sbjct: 5   KMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLN 64

Query: 64  HPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR 103
           HPQFQILLQQAADEFGFDHDMGLTIPCDE  FQSL STLR
Sbjct: 65  HPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTLR 104

[Close]

BLAST of Sed0016975 vs. NCBI nr
Match: XP_017421316.1 (PREDICTED: auxin-induced protein 15A-like [Vigna angularis] >KOM42283.1 hypothetical protein LR48_Vigan04g248100 [Vigna angularis] >BAT77542.1 hypothetical protein VIGAN_02012700 [Vigna angularis var. angularis])

HSP 1 Score: 158.7 bits (400), Expect = 2.7e-35
Identity = 73/99 (73.74%), Postives = 84/99 (84.85%), Query Frame = 0


Query: 4   KKSQTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNH 63
           K SQTT LKQILK CSSLG+KN +  D+  LPLDVPKGHFAVYVG NR+R+I+PI+FL H
Sbjct: 8   KTSQTTVLKQILKRCSSLGKKNDYDHDDDALPLDVPKGHFAVYVGENRSRYIVPISFLTH 67

Query: 64  PQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR 103
           PQFQ LL+QA +EFGFDHDMGLTIPC E+ F+SL STLR
Sbjct: 68  PQFQSLLRQAEEEFGFDHDMGLTIPCQEVVFRSLTSTLR 106

[Close]

BLAST of Sed0016975 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 5.6e-36
Identity = 70/99 (70.71%), Postives = 82/99 (82.83%), Query Frame = 0


Query: 4   KKSQTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNH 63
           K +QT  LKQILK CSSLG+KN   +DE  LPLDVPKGHF VYVG NR+R+I+PI+FL H
Sbjct: 9   KLTQTAMLKQILKRCSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIVPISFLTH 68

Query: 64  PQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR 103
           P+FQ LLQ+A +EFGFDHDMGLTIPCDEL FQ+L S +R
Sbjct: 69  PEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107

[Close]

BLAST of Sed0016975 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 5.7e-28
Identity = 62/112 (55.36%), Postives = 81/112 (72.32%), Query Frame = 0


Query: 1   MALKK------SQTTTLKQILKHCSSLGRKNQ----HHFDEHGLPLDVPKGHFAVYVGHN 60
           MA+K+      SQ  ++KQI+K CSSL +       ++  E  LP DVPKGHF VYVG N
Sbjct: 1   MAIKRSSKATSSQAASIKQIVKRCSSLRKMKNVNGCYYNQEDDLPQDVPKGHFPVYVGPN 60

Query: 61  RTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR 103
           R+R+I+PI++L+H +FQ LL+ A +EFGFDHDMGLTIPCDE+FF+SL S  R
Sbjct: 61  RSRYIVPISWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLISMFR 112

[Close]

BLAST of Sed0016975 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.0e-25
Identity = 53/98 (54.08%), Postives = 71/98 (72.45%), Query Frame = 0


Query: 4   KKSQTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNH 63
           K++Q   +K+I+K CSS G+ N    D+ GLP DVPKGHF VYVG  R R+I+PI+ L+H
Sbjct: 9   KQTQALAIKKIIKKCSSFGKNN----DDSGLPNDVPKGHFVVYVGERRNRYIVPISCLDH 68

Query: 64  PQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTL 102
           P FQ LLQ++ +EFGF+HDMG+ IPC E+ F S  S +
Sbjct: 69  PTFQDLLQRSEEEFGFNHDMGIIIPCQEVDFLSFFSMI 102

[Close]

BLAST of Sed0016975 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.0e-16
Identity = 41/67 (61.19%), Postives = 48/67 (71.64%), Query Frame = 0


Query: 36  LDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDM-GLTIPCDELFF 95
           LD PKG+ AVYVG N  RF+IP++ LN P FQ LL QA +EFG+DH M GLTIPC E  F
Sbjct: 23  LDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLF 82

Query: 96  QSLASTL 102
           Q + S L
Sbjct: 83  QHITSCL 89

[Close]

BLAST of Sed0016975 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 5.0e-16
Identity = 39/66 (59.09%), Postives = 47/66 (71.21%), Query Frame = 0


Query: 37  DVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDM-GLTIPCDELFFQ 96
           D PKG+ AVYVG    RF+IP+++LN P FQ LL QA +EFG+DH M GLTIPC E  FQ
Sbjct: 16  DAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQ 75

Query: 97  SLASTL 102
            + S L
Sbjct: 76  CITSCL 81

[Close]

BLAST of Sed0016975 vs. ExPASy TrEMBL
Match: A0A6J1J0M7 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111480219 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.7e-38
Identity = 82/106 (77.36%), Postives = 90/106 (84.91%), Query Frame = 0


Query: 1   MALKKS----QTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFII 60
           MA++KS    QT  LKQ+LK CSSLG+K Q  +DE GLPLDVPKGHF VYVG NR+R I+
Sbjct: 1   MAIRKSTKMPQTAVLKQMLKRCSSLGKK-QQQYDEQGLPLDVPKGHFVVYVGENRSRHIV 60

Query: 61  PITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR 103
           PIT+LNHPQFQILLQQAADEFGFDHDMGLTIPCDE FFQSL STLR
Sbjct: 61  PITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR 105

[Close]

BLAST of Sed0016975 vs. ExPASy TrEMBL
Match: A0A6J1FKC5 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111446542 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.7e-38
Identity = 82/106 (77.36%), Postives = 90/106 (84.91%), Query Frame = 0


Query: 1   MALKKS----QTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFII 60
           MA++KS    QT  LKQ+LK CSSLG+K Q  +DE GLPLDVPKGHF VYVG NR+R I+
Sbjct: 1   MAIRKSTKMPQTAVLKQMLKRCSSLGKK-QQQYDEQGLPLDVPKGHFVVYVGENRSRHIV 60

Query: 61  PITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR 103
           PIT+LNHPQFQILLQQAADEFGFDHDMGLTIPCDE FFQSL STLR
Sbjct: 61  PITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR 105

[Close]

BLAST of Sed0016975 vs. ExPASy TrEMBL
Match: A0A6J1IE85 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111476445 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.1e-37
Identity = 77/100 (77.00%), Postives = 85/100 (85.00%), Query Frame = 0


Query: 4   KKSQTTTLKQILKHCSSLGRKNQHHFDE-HGLPLDVPKGHFAVYVGHNRTRFIIPITFLN 63
           K  QT  LKQ++K CSS+GRK   H+D+  GLPLDVPKGHF VYVG NR+R+I+PITFLN
Sbjct: 5   KMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLN 64

Query: 64  HPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR 103
           HPQFQILLQQAADEFGFDHDMGLTIPCDE  FQSL STLR
Sbjct: 65  HPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTLR 104

[Close]

BLAST of Sed0016975 vs. ExPASy TrEMBL
Match: A0A6J1F9Z6 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111443449 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.1e-37
Identity = 77/100 (77.00%), Postives = 85/100 (85.00%), Query Frame = 0


Query: 4   KKSQTTTLKQILKHCSSLGRKNQHHFDE-HGLPLDVPKGHFAVYVGHNRTRFIIPITFLN 63
           K  QT  LKQ++K CSS+GRK   H+D+  GLPLDVPKGHF VYVG NR+R+I+PITFLN
Sbjct: 5   KMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLN 64

Query: 64  HPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR 103
           HPQFQILLQQAADEFGFDHDMGLTIPCDE  FQSL STLR
Sbjct: 65  HPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTLR 104

[Close]

BLAST of Sed0016975 vs. ExPASy TrEMBL
Match: A0A0L9UHN8 (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan04g248100 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.3e-35
Identity = 73/99 (73.74%), Postives = 84/99 (84.85%), Query Frame = 0


Query: 4   KKSQTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNH 63
           K SQTT LKQILK CSSLG+KN +  D+  LPLDVPKGHFAVYVG NR+R+I+PI+FL H
Sbjct: 8   KTSQTTVLKQILKRCSSLGKKNDYDHDDDALPLDVPKGHFAVYVGENRSRYIVPISFLTH 67

Query: 64  PQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR 103
           PQFQ LL+QA +EFGFDHDMGLTIPC E+ F+SL STLR
Sbjct: 68  PQFQSLLRQAEEEFGFDHDMGLTIPCQEVVFRSLTSTLR 106

[Close]

BLAST of Sed0016975 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 151.4 bits (381), Expect = 4.0e-37
Identity = 70/99 (70.71%), Postives = 82/99 (82.83%), Query Frame = 0


Query: 4   KKSQTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNH 63
           K +QT  LKQILK CSSLG+KN   +DE  LPLDVPKGHF VYVG NR+R+I+PI+FL H
Sbjct: 9   KLTQTAMLKQILKRCSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIVPISFLTH 68

Query: 64  PQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR 103
           P+FQ LLQ+A +EFGFDHDMGLTIPCDEL FQ+L S +R
Sbjct: 69  PEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107

[Close]

BLAST of Sed0016975 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 142.9 bits (359), Expect = 1.4e-34
Identity = 69/108 (63.89%), Postives = 86/108 (79.63%), Query Frame = 0


Query: 1   MALKK----SQTTTLKQILKHCSSLGRK--NQHHFDEHGLPLDVPKGHFAVYVGHNRTRF 60
           MA+KK    +QT  +KQILK CSSLG+K  N +  DE+G PL+VPKGHF VYVG NR R+
Sbjct: 1   MAMKKANKLTQTAMIKQILKRCSSLGKKQSNVYGEDENGSPLNVPKGHFVVYVGENRVRY 60

Query: 61  IIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR 103
           ++PI+FL  P+FQ+LLQQA +EFGFDHDMGLTIPC+E+ F+SL S LR
Sbjct: 61  VVPISFLTRPEFQLLLQQAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 108

[Close]

BLAST of Sed0016975 vs. TAIR 10
Match: AT2G16580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 141.0 bits (354), Expect = 5.4e-34
Identity = 67/100 (67.00%), Postives = 81/100 (81.00%), Query Frame = 0


Query: 4   KKSQTTTLKQILKHCSSLGRKN-QHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLN 63
           K +QT  L+QILK CSSLG+KN    ++E  LPLDVPKGHF VYVGHNR+R+I+PI+FL 
Sbjct: 9   KLAQTAMLRQILKRCSSLGKKNGGGGYEEVDLPLDVPKGHFPVYVGHNRSRYIVPISFLT 68

Query: 64  HPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR 103
           +  FQ LL++A +EFGFDHDMGLTIPCDELFFQ L S +R
Sbjct: 69  NLDFQCLLRRAEEEFGFDHDMGLTIPCDELFFQDLTSMIR 108

[Close]

BLAST of Sed0016975 vs. TAIR 10
Match: AT4G38860.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 138.3 bits (347), Expect = 3.5e-33
Identity = 71/107 (66.36%), Postives = 83/107 (77.57%), Query Frame = 0


Query: 1   MALKKS----QTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFII 60
           MA+K+S    QT  LKQILK CSSLG+K    +DE GLPLDVPKGHF VYVG  RTR+I+
Sbjct: 1   MAVKRSSKLTQTAMLKQILKRCSSLGKK--QCYDEEGLPLDVPKGHFPVYVGEKRTRYIV 60

Query: 61  PITFLNHPQFQILLQQAADEFGFDHDM-GLTIPCDELFFQSLASTLR 103
           PI+FL HP+F ILLQQA +EFGF HDM GLTIPC+E+ F SL S +R
Sbjct: 61  PISFLTHPEFLILLQQAEEEFGFRHDMGGLTIPCEEVVFLSLTSMIR 105

[Close]

BLAST of Sed0016975 vs. TAIR 10
Match: AT1G19830.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 136.0 bits (341), Expect = 1.7e-32
Identity = 63/104 (60.58%), Postives = 81/104 (77.88%), Query Frame = 0


Query: 4   KKSQTTTLKQILKHCSSLGRK------NQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIP 63
           K +QTT +KQILK CSSLG+K      + H  D   LPLDVPKGHF VYVG NR R+++P
Sbjct: 8   KLTQTTMIKQILKRCSSLGKKQSSEYNDTHEHDGDSLPLDVPKGHFVVYVGGNRVRYVLP 67

Query: 64  ITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTL 102
           I+FL  P+FQ+LLQQA +EFGFDH+MGLTIPC+E+ F+SL +++
Sbjct: 68  ISFLTRPEFQLLLQQAEEEFGFDHNMGLTIPCEEVAFKSLITSM 111

The following BLAST results are available for this feature:

BLAST of Sed0016975 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023535895.1	7.6e-38	78.00	auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]	[more]
XP_022941161.1	7.6e-38	77.36	auxin-responsive protein SAUR50-like [Cucurbita moschata] >XP_022980903.1 auxin-...	[more]
KAG6608586.1	2.2e-37	79.80	Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022937029.1	6.4e-37	77.00	auxin-responsive protein SAUR50-like [Cucurbita moschata] >XP_022975872.1 auxin-...	[more]
XP_017421316.1	2.7e-35	73.74	PREDICTED: auxin-induced protein 15A-like [Vigna angularis] >KOM42283.1 hypothet...	[more]

BLAST of Sed0016975 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	5.6e-36	70.71	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
Q9SL45	5.7e-28	55.36	Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1...	[more]
P0DKL1	2.0e-25	54.08	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
P32295	1.0e-16	61.19	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ...	[more]
P33081	5.0e-16	59.09	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of Sed0016975 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J0M7	3.7e-38	77.36	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111480219...	[more]
A0A6J1FKC5	3.7e-38	77.36	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114465...	[more]
A0A6J1IE85	3.1e-37	77.00	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111476445...	[more]
A0A6J1F9Z6	3.1e-37	77.00	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114434...	[more]
A0A0L9UHN8	1.3e-35	73.74	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan04g248100 PE...	[more]

BLAST of Sed0016975 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34760.1	4.0e-37	70.71	SAUR-like auxin-responsive protein family	[more]
AT1G75580.1	1.4e-34	63.89	SAUR-like auxin-responsive protein family	[more]
AT2G16580.1	5.4e-34	67.00	SAUR-like auxin-responsive protein family	[more]
AT4G38860.1	3.5e-33	66.36	SAUR-like auxin-responsive protein family	[more]
AT1G19830.1	1.7e-32	60.58	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 12..100 e-value: 2.0E-27 score: 95.2
None	No IPR available	PANTHER	PTHR31374:SF311	SMALL AUXIN-UP RNA-RELATED	coord: 4..102
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 4..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0016975.1	Sed0016975.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin