Sed0016945 (gene) Chayote v1

Overview
NameSed0016945
Typegene
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat (PPR) superfamily protein isoform 2
LocationLG07: 12141639 .. 12145972 (-)
RNA-Seq ExpressionSed0016945
SyntenySed0016945
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGCAAGTCTCCCCTTTCTTCGGCGGCAAGGAATCGACCCTCCGGCGAAGCCCAGAATTTTTCATCTCTTCCGTTTAGGATCTTCGCAACCTCTCTGCCCCAATCTTCCACTGGTTTTTCTCCGATCGTTTTATCTTCTCGTCAAGAGGTTAGCTCTCTCTTCTCCGTTTGGATCTATTGTTGCTTCGATGGAAACCCTAGATCTCTGTTTTCGATTTCGTTGTTGTTGTTTATTGATGTTAGTTGATTTCTGCGGAGTATGTAGTGAATTTTTGTTCCCCAAGTTGGATTTTTAATTGTTGCGAGGTTGAGAGTGAGAAGATTTCTTGGTGCCGTTAGGGTTTCATCGCTTTCCTTTTTTTCGATTATCGGAACTAATCCTTTTTTATTGTGATGTAATTTATTTTCTTCGATTTTATTGAGATTTTGACGGTTAATTGTATTTTTACTGATAACTTGGCAAGAACCTGTCATCTACGAGTTTTTCAGAGGTTAAATGTACGCAATCGGCGTCTATTAGTTTTAAATTTGAACGTACTGTGGTGGGTTACTTTGTAATTTTGTTTGCTTTTTTGTTCTTTAAGTTATCGGAACCGCCTTGTTGTTGCATACTGCTCCTGATCTTCATTATTGTCCTTATTGGCTTTCTTCGAATTCTTCTAACTCATTTGTAACATATATGTTAGATGGAGGCTAAACCACTTACTACTGAAGCCATTGCCATAACTGAGAAGAAGATGGACATGTCTTTAGGTTTGGCTTCTGGAATTCTTGTTTTGGTACTTTTGTGTTTATGGTCCTTGAAAGATTGTTAATTATTCGTTTTTTACTTGTTTTTGTTGGATTAGATGACATTATCAAAATGACCAAAAATACTGGAAATAAAGGCAGGAACCAAAGGAGGTTTCCGGTAAGAACTTGTTTTTATTTTGCATGCTTTTAACTTTTCGTTGAAATGGAAGTTTTCTTTTTTATTATATTGTATTAATGCTTGATCTTTTACGTGCAGAACAAAATGCAGAAATTCCCAAATAATGCCACCCAGGATAGAACTAGGAAGGTGCAACGTTTCACTGACTCGAGATCTTCTCTAAGACAGGTGTGTACAATTATTTTTAATTTAATTTCATATATTTTGTTTTTGTATGTTTGGTTCTGAATTTTTCATTTTGTTTAGGGAGCTTTGGCCAAGAGAAGGTCCAATTTTCAAGTGAATCATTTTGCTTTTGCAAATGAGGTTGCAAGAAAGACTTCAGTTGCTCCGATTCGGCCTAGACCTTTTAATCGTAGGGCACCCAATTGGAATAAGACAAGGTATTTCTCATACTTTTTAAGTGTGCAGAAGGTTCACACTGTGAATTATGATTATAATTTTTACTTCATTTCTGGCAATCATCTGGAACTGTAAGATTATTGAAGAAGTGTTCACAGATGAACGTTTGAAATCTTGTTTCTTATTGGTTTAATGTCATATTTGATGTCATGGCAGGTAAATCACGTTTATACAAACTTGATGACTTCTAGAATCAAGTTTTTCTATATGAAGTTAGTGAAGTTACTCGTTGGTTGGGACAATTGATTGATAAGTTTGCTTCAACCAGTTGAAATTGGAGTGGGAGTATTTCCAATTATTTTGTTTCTCCCATGCTGCCTGGGATTTGATTCTGCTTTATCTTCTTAAGTTGGTTTTGGAATGCATCGAGTTATGTTTTGATTTTCTGATGATTAAGTGATTGGTGGGAGGGAGTCTACAGATTATGGGACAAAGATAATTTGGATAATTTCACTGAATTTGATTGCTGCAACCATCTGGAAAATGTCATAAAAAGAGCTTTTGTGTGCATTTGGATGAGTATGCTTAGTTTTGAGTTTTTGCTCCTTATTGAATGTGTTTGTATGGTCTTGAATTTCTCAATTCTTCATAGACTATTCATGAAAATAGAGCAGCCTCAGCCAGTTACCCTTTAGGTGTGAGGATGTGGAAGCTGCTTTGTAAGATGTGATGTTTTAACACACCAGAGAATTATGATGGTGCCACTATTCCCTATTGATTGTTCCAATAGTGTTGACCATGCTCAAAGTTTGCTGTGGTATTTGACATAATCTCCATTTGCTTTCTTTGATGCATGCAAAGAACCACGGGGGCAGGGGTGATGTTGCACATCTTAATAACCCTTCTAGTGACTGTCTGCTAGTTTCCTTGATTTCTTGGCTTCCCTTTTCATTCATACACTCATTGGGAACATTAGCCAGTCTTTCAACTATCATGTATGACTAATTGCAAAGTTCACTTGTTGACTAGCCATAGAACAGCTAATGAGTTTTCGACTCTGGAAAATTTTCTCTTCTGATCCAAATGCTTCTTTTAGTTTCTTTAGTCAACATTGGCAGTGGAAGATGTTATTTCATCATCTTTAATAGAACCTCGGGAATGGAATTGACGTTTTGCATCTTGCAAGTAAAACAATGAATTCTCTACTTCTGGTAATTTTGTCATGACATAATCATGTGATAACAAAAAGTGCTGAAGAAATTTATATGCCTAGTTAAAATGTATGAACAGTGGCATTTATGAGGGGTATCGTGTGTATATTATGGGTCTTAGTCACAGTGGAATACAGTACTGCAGACTGCTGCCGCTTTTAAAAGAAGTCTTCATTTTCTGGTTCAAGTTCTGGACATGAATTTTCCTGGAGTAGATTTCTGTTCATTATATTGCTATATTGGACCCTTTTGTTGTGCATAATAGCAAGCGAAGCATGTGTTGATTGATTTGATGTCTGGGGTCTGCTTCGGTTACTGGAAAGTGCATTTTTGGATCCAATCAAGTGTTTCACATTTTGAGCTGATTCACATTTTATTTGACTGCATTCTTCTGATCCGGTGTGTCTTTTATTTCTATTATTGGGTTCCGTTTGAGTTTGCTCATTGAGGTAAGATGTTCTGATCTATCTGCATTCAGCATCACTCACTCGAGGACATGTTAAAGATTGTCGGTGTTTGTATAGAAATTGTGCTGGTCTGTGTATCTAAATGTTATTTTCTGTTCTTCAACCATTTGAACAGTTTCTTGTACAGGGTTGAAGCTCCACCTGTTCAGAGGAAGCCATTTACTAATGGAACCTTTATTCCCAAGGTACTGCCTTCTTACTGTGATGGTCAGAGTACATTTTATTGTGAATCTTTAGTAGTTATAGGTAGGCACTGTACTTTTTTTTTAAATGTGTCATTTCTAAAATTAACTGTCAAAATGGATCTCTTTTTTTTTAAACTATTTGTCTGACTTTTTTTTGGTCCTTGTACGGTTGTCTTTGCCTAAGAAGCCAGTCATGTACAAAAATGGTCTTGCATGGCAAGGACAAGTATAGGAACCCATTTTGACCAATATTTTGAAATGAGGCCTATTTTGACATAAAAAAACCCGTAATATGAATTATATTTATATGCGTTTAGTTTGAGTTGGTGTGCTCTTCTCAAGGTTCTAGATTTGAGACTTGTCCTTCCATGTCTCATAGTACCCGGCCTAAGAATGGGCGTGGTTATCTCGAGTATAGTGGAGTGAAACTCTGATTTCTTAGTTTTCAAAAGAAAAATTGTCAATATGAGTTGAATTTCTTTTGCAAGTCTGGATCACTGTGGTCTGCTCTTTATTCATTCTATCTTGCCTTGTGCAGGTAACTGCACCAGTCCTGCTTCAAACGAATGCTACACCAAGACAGAGGCCACAGACGCTCGACTCATTGTTTGCCAACATGAAGGAACAGAGGTTGAGGGGGTTGTCACAACGACAAAATGGACAGAATGGCATTGCACAACGAAGGAATGGTGGTCGCCAGCAAAGACCTCCATGGGGAAGAGGCCGTTTTGGTAACTAAAGAACAAACGAATGCGCACAAAGTAACCTCGTGCTAGGGATGGAGTATTAGGTTTGGGAAATGAAGATGTTAACTGCTTATGCTTATCCAGGTGCCTGTTATCTTACGATGAAAGGGATGAAAGGGAATCTAGTTGTGTCACTTGTCATCTTTTAAACCGAAACCTGTGGCCTGTTTATGCATTTTTCTAGCTTCATTATGGACCGAATACTATATAGATTTGTATCTGAATCTGCAGTTCGTGTAAAGCCTTTTCTTTCTTCTGTTTCTGTTATGGTGGCCTAATTTCTCAACATTTTATTTGATGACTTGTTTAGTGACGAAACAATTATTTGAACAAGTTTGATAGTTCCCTATTTTATGTTTCACCTCGTTTTTTATTCTTTGAGTTTGGTGTTTCATTTTACAATGCTTTATGTATTTGGTCTTCCAAGTCTTGAAAAATGATAAATCTTGCAC

mRNA sequence

ACGCAAGTCTCCCCTTTCTTCGGCGGCAAGGAATCGACCCTCCGGCGAAGCCCAGAATTTTTCATCTCTTCCGTTTAGGATCTTCGCAACCTCTCTGCCCCAATCTTCCACTGGTTTTTCTCCGATCGTTTTATCTTCTCGTCAAGAGATGGAGGCTAAACCACTTACTACTGAAGCCATTGCCATAACTGAGAAGAAGATGGACATGTCTTTAGATGACATTATCAAAATGACCAAAAATACTGGAAATAAAGGCAGGAACCAAAGGAGGTTTCCGAACAAAATGCAGAAATTCCCAAATAATGCCACCCAGGATAGAACTAGGAAGGTGCAACGTTTCACTGACTCGAGATCTTCTCTAAGACAGGGAGCTTTGGCCAAGAGAAGGTCCAATTTTCAAGTGAATCATTTTGCTTTTGCAAATGAGGTTGCAAGAAAGACTTCAGTTGCTCCGATTCGGCCTAGACCTTTTAATCGTAGGGCACCCAATTGGAATAAGACAAGGGTTGAAGCTCCACCTGTTCAGAGGAAGCCATTTACTAATGGAACCTTTATTCCCAAGGTAACTGCACCAGTCCTGCTTCAAACGAATGCTACACCAAGACAGAGGCCACAGACGCTCGACTCATTGTTTGCCAACATGAAGGAACAGAGGTTGAGGGGGTTGTCACAACGACAAAATGGACAGAATGGCATTGCACAACGAAGGAATGGTGGTCGCCAGCAAAGACCTCCATGGGGAAGAGGCCGTTTTGGTAACTAAAGAACAAACGAATGCGCACAAAGTAACCTCGTGCTAGGGATGGAGTATTAGGTTTGGGAAATGAAGATGTTAACTGCTTATGCTTATCCAGGTGCCTGTTATCTTACGATGAAAGGGATGAAAGGGAATCTAGTTGTGTCACTTGTCATCTTTTAAACCGAAACCTGTGGCCTGTTTATGCATTTTTCTAGCTTCATTATGGACCGAATACTATATAGATTTGTATCTGAATCTGCAGTTCGTGTAAAGCCTTTTCTTTCTTCTGTTTCTGTTATGGTGGCCTAATTTCTCAACATTTTATTTGATGACTTGTTTAGTGACGAAACAATTATTTGAACAAGTTTGATAGTTCCCTATTTTATGTTTCACCTCGTTTTTTATTCTTTGAGTTTGGTGTTTCATTTTACAATGCTTTATGTATTTGGTCTTCCAAGTCTTGAAAAATGATAAATCTTGCAC

Coding sequence (CDS)

ATGGAGGCTAAACCACTTACTACTGAAGCCATTGCCATAACTGAGAAGAAGATGGACATGTCTTTAGATGACATTATCAAAATGACCAAAAATACTGGAAATAAAGGCAGGAACCAAAGGAGGTTTCCGAACAAAATGCAGAAATTCCCAAATAATGCCACCCAGGATAGAACTAGGAAGGTGCAACGTTTCACTGACTCGAGATCTTCTCTAAGACAGGGAGCTTTGGCCAAGAGAAGGTCCAATTTTCAAGTGAATCATTTTGCTTTTGCAAATGAGGTTGCAAGAAAGACTTCAGTTGCTCCGATTCGGCCTAGACCTTTTAATCGTAGGGCACCCAATTGGAATAAGACAAGGGTTGAAGCTCCACCTGTTCAGAGGAAGCCATTTACTAATGGAACCTTTATTCCCAAGGTAACTGCACCAGTCCTGCTTCAAACGAATGCTACACCAAGACAGAGGCCACAGACGCTCGACTCATTGTTTGCCAACATGAAGGAACAGAGGTTGAGGGGGTTGTCACAACGACAAAATGGACAGAATGGCATTGCACAACGAAGGAATGGTGGTCGCCAGCAAAGACCTCCATGGGGAAGAGGCCGTTTTGGTAACTAA

Protein sequence

MEAKPLTTEAIAITEKKMDMSLDDIIKMTKNTGNKGRNQRRFPNKMQKFPNNATQDRTRKVQRFTDSRSSLRQGALAKRRSNFQVNHFAFANEVARKTSVAPIRPRPFNRRAPNWNKTRVEAPPVQRKPFTNGTFIPKVTAPVLLQTNATPRQRPQTLDSLFANMKEQRLRGLSQRQNGQNGIAQRRNGGRQQRPPWGRGRFGN
Homology
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BLAST of Sed0016945 vs. NCBI nr
Match: XP_022941743.1 (uncharacterized protein LOC111447019 isoform X1 [Cucurbita moschata] >XP_022941744.1 uncharacterized protein LOC111447019 isoform X1 [Cucurbita moschata] >XP_022941747.1 uncharacterized protein LOC111447019 isoform X1 [Cucurbita moschata])

HSP 1 Score: 326.2 bits (835), Expect = 2.0e-85
Identity = 173/204 (84.80%), Postives = 181/204 (88.73%), Query Frame = 0 

Query: 1   MEAKPLTTEAIAITEKKMDMSLDDIIKMTKNTGNKGRNQRRFPNKMQKFPNNATQDRTRK 60
           M AKPLTTEAIAITEKKMDM+LDDIIKM+KNTGNKGR QRRFPNKMQKFPNNATQDR RK
Sbjct: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60

Query: 61  VQRFTDSRSSLRQGALAKRRSNFQVNHFAFANEVARKTSVAPIRPRPFNRRAPNWNKTRV 120
           +QRF D+R+SLRQGALAKRRSNFQ N FA A EVAR  +VAPIRPR FNRR PNW KTRV
Sbjct: 61  LQRFMDARTSLRQGALAKRRSNFQGNQFALATEVARTAAVAPIRPRAFNRRVPNWKKTRV 120

Query: 121 EAPPVQRKPFTNGTFIPKVTAPVLLQTNATPRQRPQTLDSLFANMKEQRLRGLSQRQNGQ 180
           EAPPVQRKPF NGTFIPK+TAPV  QTNATPRQRPQTLDSLFANMKEQRLR LSQRQNG 
Sbjct: 121 EAPPVQRKPFNNGTFIPKITAPVQTQTNATPRQRPQTLDSLFANMKEQRLRVLSQRQNGG 180

Query: 181 NGIAQRRNGGRQQRPPWGRGRFGN 205
              AQ+RNG RQQRPPWGRGR GN
Sbjct: 181 ---AQQRNGARQQRPPWGRGRIGN 201

[Close]
BLAST of Sed0016945 vs. NCBI nr
Match: KAG7031152.1 (hypothetical protein SDJN02_05192, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 324.3 bits (830), Expect = 7.4e-85
Identity = 171/204 (83.82%), Postives = 180/204 (88.24%), Query Frame = 0 

Query: 1   MEAKPLTTEAIAITEKKMDMSLDDIIKMTKNTGNKGRNQRRFPNKMQKFPNNATQDRTRK 60
           M AKPLTTEAIAITEKKMDM+LDDIIKM+KNTGNKGR QRRFPNKMQKFPNNATQDR RK
Sbjct: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60

Query: 61  VQRFTDSRSSLRQGALAKRRSNFQVNHFAFANEVARKTSVAPIRPRPFNRRAPNWNKTRV 120
           +QRF D+R+SLRQGALAKRRSNFQ N FA A EVAR  +VAPIRPR FNRR PNW KTRV
Sbjct: 61  LQRFMDARTSLRQGALAKRRSNFQGNQFALATEVARTAAVAPIRPRAFNRRVPNWKKTRV 120

Query: 121 EAPPVQRKPFTNGTFIPKVTAPVLLQTNATPRQRPQTLDSLFANMKEQRLRGLSQRQNGQ 180
           EAPPVQRKPF NGTFIPK+TAPV  Q NATPRQRPQTLDSLFANMKEQRLR LSQR   Q
Sbjct: 121 EAPPVQRKPFNNGTFIPKITAPVQTQPNATPRQRPQTLDSLFANMKEQRLRVLSQR---Q 180

Query: 181 NGIAQRRNGGRQQRPPWGRGRFGN 205
           NG+AQ+RNG RQQRPPWGRGR  N
Sbjct: 181 NGVAQQRNGSRQQRPPWGRGRIAN 201

[Close]
BLAST of Sed0016945 vs. NCBI nr
Match: KAG6600514.1 (Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 324.3 bits (830), Expect = 7.4e-85
Identity = 171/204 (83.82%), Postives = 180/204 (88.24%), Query Frame = 0 

Query: 1   MEAKPLTTEAIAITEKKMDMSLDDIIKMTKNTGNKGRNQRRFPNKMQKFPNNATQDRTRK 60
           M AKPLTTEAIAITEKKMDM+LDDIIKM+KNTGNKGR QRRFPNKMQKFPNNATQDR RK
Sbjct: 291 MAAKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 350

Query: 61  VQRFTDSRSSLRQGALAKRRSNFQVNHFAFANEVARKTSVAPIRPRPFNRRAPNWNKTRV 120
           +QRF D+R+SLRQGALAKRRSNFQ N FA A EVAR  +VAPIRPR FNRR PNW KTRV
Sbjct: 351 LQRFMDARTSLRQGALAKRRSNFQGNQFALATEVARTAAVAPIRPRAFNRRVPNWKKTRV 410

Query: 121 EAPPVQRKPFTNGTFIPKVTAPVLLQTNATPRQRPQTLDSLFANMKEQRLRGLSQRQNGQ 180
           EAPPVQRKPF NGTFIPK+TAPV  Q NATPRQRPQTLDSLFANMKEQRLR LSQR   Q
Sbjct: 411 EAPPVQRKPFNNGTFIPKITAPVQTQPNATPRQRPQTLDSLFANMKEQRLRVLSQR---Q 470

Query: 181 NGIAQRRNGGRQQRPPWGRGRFGN 205
           NG+AQ+RNG RQQRPPWGRGR  N
Sbjct: 471 NGVAQQRNGSRQQRPPWGRGRIAN 491

[Close]
BLAST of Sed0016945 vs. NCBI nr
Match: XP_023528268.1 (uncharacterized protein LOC111791234 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023528276.1 uncharacterized protein LOC111791234 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321.2 bits (822), Expect = 6.3e-84
Identity = 171/204 (83.82%), Postives = 180/204 (88.24%), Query Frame = 0 

Query: 1   MEAKPLTTEAIAITEKKMDMSLDDIIKMTKNTGNKGRNQRRFPNKMQKFPNNATQDRTRK 60
           M AKPLTTEAIAITEKKMDM+LDDIIKM+KNTG+KGR QRRFPNKMQKFPNNATQDR RK
Sbjct: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNTGSKGRKQRRFPNKMQKFPNNATQDRPRK 60

Query: 61  VQRFTDSRSSLRQGALAKRRSNFQVNHFAFANEVARKTSVAPIRPRPFNRRAPNWNKTRV 120
           +QRF D+R+SLRQGALAKRRSNFQ N FA A EVAR  +VAPIRPR FNRR PNW KTRV
Sbjct: 61  LQRFMDARTSLRQGALAKRRSNFQGNQFALATEVARTAAVAPIRPRAFNRRVPNWKKTRV 120

Query: 121 EAPPVQRKPFTNGTFIPKVTAPVLLQTNATPRQRPQTLDSLFANMKEQRLRGLSQRQNGQ 180
           EAPPVQRKP  NGTFIPK+TAPV  QTNATPRQRPQTLDSLFANMKEQRLR LSQRQNG 
Sbjct: 121 EAPPVQRKPSNNGTFIPKITAPVQTQTNATPRQRPQTLDSLFANMKEQRLRVLSQRQNGG 180

Query: 181 NGIAQRRNGGRQQRPPWGRGRFGN 205
              AQ+RNG RQQRPPWGRGR GN
Sbjct: 181 ---AQQRNGSRQQRPPWGRGRIGN 201

[Close]
BLAST of Sed0016945 vs. NCBI nr
Match: XP_022982836.1 (uncharacterized protein LOC111481570 isoform X1 [Cucurbita maxima] >XP_022982844.1 uncharacterized protein LOC111481570 isoform X1 [Cucurbita maxima] >XP_022982853.1 uncharacterized protein LOC111481570 isoform X1 [Cucurbita maxima])

HSP 1 Score: 319.3 bits (817), Expect = 2.4e-83
Identity = 169/204 (82.84%), Postives = 178/204 (87.25%), Query Frame = 0 

Query: 1   MEAKPLTTEAIAITEKKMDMSLDDIIKMTKNTGNKGRNQRRFPNKMQKFPNNATQDRTRK 60
           M  KPLTTEAIAITEKKMDM+LDDIIKM+KNTGNKGR QRRFPNKMQKFPNNATQDR RK
Sbjct: 1   MATKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60

Query: 61  VQRFTDSRSSLRQGALAKRRSNFQVNHFAFANEVARKTSVAPIRPRPFNRRAPNWNKTRV 120
           +QRF D+R+SLRQGA AKRRSNFQ N FA A EVARK +VAPIRPR FNR  PNW KTRV
Sbjct: 61  LQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFNRWVPNWKKTRV 120

Query: 121 EAPPVQRKPFTNGTFIPKVTAPVLLQTNATPRQRPQTLDSLFANMKEQRLRGLSQRQNGQ 180
           EAPPVQRKPF NGTFIPK+ APV  QTNATPRQ+PQTLDSLFANMKEQRLR LSQRQNG 
Sbjct: 121 EAPPVQRKPFNNGTFIPKIAAPVQTQTNATPRQKPQTLDSLFANMKEQRLRVLSQRQNGG 180

Query: 181 NGIAQRRNGGRQQRPPWGRGRFGN 205
              AQ+RNG RQQRPPWGRGR GN
Sbjct: 181 ---AQQRNGARQQRPPWGRGRIGN 201

[Close]
BLAST of Sed0016945 vs. ExPASy TrEMBL
Match: A0A6J1FPB6 (uncharacterized protein LOC111447019 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447019 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 9.4e-86
Identity = 173/204 (84.80%), Postives = 181/204 (88.73%), Query Frame = 0 

Query: 1   MEAKPLTTEAIAITEKKMDMSLDDIIKMTKNTGNKGRNQRRFPNKMQKFPNNATQDRTRK 60
           M AKPLTTEAIAITEKKMDM+LDDIIKM+KNTGNKGR QRRFPNKMQKFPNNATQDR RK
Sbjct: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60

Query: 61  VQRFTDSRSSLRQGALAKRRSNFQVNHFAFANEVARKTSVAPIRPRPFNRRAPNWNKTRV 120
           +QRF D+R+SLRQGALAKRRSNFQ N FA A EVAR  +VAPIRPR FNRR PNW KTRV
Sbjct: 61  LQRFMDARTSLRQGALAKRRSNFQGNQFALATEVARTAAVAPIRPRAFNRRVPNWKKTRV 120

Query: 121 EAPPVQRKPFTNGTFIPKVTAPVLLQTNATPRQRPQTLDSLFANMKEQRLRGLSQRQNGQ 180
           EAPPVQRKPF NGTFIPK+TAPV  QTNATPRQRPQTLDSLFANMKEQRLR LSQRQNG 
Sbjct: 121 EAPPVQRKPFNNGTFIPKITAPVQTQTNATPRQRPQTLDSLFANMKEQRLRVLSQRQNGG 180

Query: 181 NGIAQRRNGGRQQRPPWGRGRFGN 205
              AQ+RNG RQQRPPWGRGR GN
Sbjct: 181 ---AQQRNGARQQRPPWGRGRIGN 201

[Close]
BLAST of Sed0016945 vs. ExPASy TrEMBL
Match: A0A6J1J5N5 (uncharacterized protein LOC111481570 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481570 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.2e-83
Identity = 169/204 (82.84%), Postives = 178/204 (87.25%), Query Frame = 0 

Query: 1   MEAKPLTTEAIAITEKKMDMSLDDIIKMTKNTGNKGRNQRRFPNKMQKFPNNATQDRTRK 60
           M  KPLTTEAIAITEKKMDM+LDDIIKM+KNTGNKGR QRRFPNKMQKFPNNATQDR RK
Sbjct: 1   MATKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60

Query: 61  VQRFTDSRSSLRQGALAKRRSNFQVNHFAFANEVARKTSVAPIRPRPFNRRAPNWNKTRV 120
           +QRF D+R+SLRQGA AKRRSNFQ N FA A EVARK +VAPIRPR FNR  PNW KTRV
Sbjct: 61  LQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFNRWVPNWKKTRV 120

Query: 121 EAPPVQRKPFTNGTFIPKVTAPVLLQTNATPRQRPQTLDSLFANMKEQRLRGLSQRQNGQ 180
           EAPPVQRKPF NGTFIPK+ APV  QTNATPRQ+PQTLDSLFANMKEQRLR LSQRQNG 
Sbjct: 121 EAPPVQRKPFNNGTFIPKIAAPVQTQTNATPRQKPQTLDSLFANMKEQRLRVLSQRQNGG 180

Query: 181 NGIAQRRNGGRQQRPPWGRGRFGN 205
              AQ+RNG RQQRPPWGRGR GN
Sbjct: 181 ---AQQRNGARQQRPPWGRGRIGN 201

[Close]
BLAST of Sed0016945 vs. ExPASy TrEMBL
Match: A0A6J1C7V3 (uncharacterized protein LOC111008218 OS=Momordica charantia OX=3673 GN=LOC111008218 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 9.1e-81
Identity = 169/206 (82.04%), Postives = 176/206 (85.44%), Query Frame = 0 

Query: 1   MEAKPLTTEAIAITEKKMDMSLDDIIKMTKNTGNKGRNQRRFPNKMQKFPNNATQDRTRK 60
           M AKPLTTEAIAITEKKMDM+LDDIIKM+KNTGNK R QRR PNK QKFPNNATQDR RK
Sbjct: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKTRKQRRLPNKTQKFPNNATQDRPRK 60

Query: 61  VQRFTDSRSSLRQGALAKRRSNFQVNHFAFANEVARKTSVAPIRPRPFNRRAPNWNKTRV 120
           +QRF DSRSSLRQGALAK+RSNFQ N F  A EVARK +VAPIRPR FNRRAPNW+KTR 
Sbjct: 61  LQRFMDSRSSLRQGALAKKRSNFQGNQFPLAAEVARKAAVAPIRPRGFNRRAPNWSKTRF 120

Query: 121 EAPPVQRKPFTNGTFIPKV--TAPVLLQTNATPRQRPQTLDSLFANMKEQRLRGLSQRQN 180
           +APPVQRKPFTNGTFIPKV   A    QTN  PRQRPQTLDSLFANMKEQRLR LSQRQN
Sbjct: 121 DAPPVQRKPFTNGTFIPKVAIAARAQPQTNTMPRQRPQTLDSLFANMKEQRLRVLSQRQN 180

Query: 181 GQNGIAQRRNGGRQQRPPWGRGRFGN 205
           G NG  QR  GGRQQRPPWGRGRFGN
Sbjct: 181 G-NGAPQRNGGGRQQRPPWGRGRFGN 205

[Close]
BLAST of Sed0016945 vs. ExPASy TrEMBL
Match: A0A5A7TPS5 (Pentatricopeptide repeat (PPR) superfamily protein isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G001910 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 4.5e-80
Identity = 167/204 (81.86%), Postives = 177/204 (86.76%), Query Frame = 0 

Query: 1   MEAKPLTTEAIAITEKKMDMSLDDIIKMTKNTGNKGRNQRRFPNKMQKFPNNATQDRTRK 60
           M AKPLTTEAIAITEKKMDM+LDDIIKM+KNTGNKGR QRR PNKMQKFPNNATQDR RK
Sbjct: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRLPNKMQKFPNNATQDRPRK 60

Query: 61  VQRFTDSRSSLRQGALAKRRSNFQVNHFAFANEVARKTSVAPIRPRPFNRRAPNWNKTRV 120
           +QRF DSRSSLRQGALA RRSNFQ N FA A EVARK +VAPIRPR F RRAPNWNKTRV
Sbjct: 61  LQRFMDSRSSLRQGALANRRSNFQGNQFALATEVARKAAVAPIRPRAFTRRAPNWNKTRV 120

Query: 121 EA-PPVQRKPFTNGTFIPKVTAPVLLQTNATPRQRPQTLDSLFANMKEQRLRGLSQRQNG 180
           +A PPV +K FTNG F+PKV+AP   QTNATPRQRPQTLDSLFANMKEQRLR LSQRQNG
Sbjct: 121 DAPPPVPKKSFTNGNFVPKVSAPAQQQTNATPRQRPQTLDSLFANMKEQRLRVLSQRQNG 180

Query: 181 QNGIA-QRRNGGRQQRPPWGRGRF 203
             G A Q+RNGGRQQRPPWG+  F
Sbjct: 181 GGGGAQQQRNGGRQQRPPWGKRPF 204

[Close]
BLAST of Sed0016945 vs. ExPASy TrEMBL
Match: A0A5D3CYD8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003930 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 4.5e-80
Identity = 167/204 (81.86%), Postives = 177/204 (86.76%), Query Frame = 0 

Query: 1   MEAKPLTTEAIAITEKKMDMSLDDIIKMTKNTGNKGRNQRRFPNKMQKFPNNATQDRTRK 60
           M AKPLTTEAIAITEKKMDM+LDDIIKM+KNTGNKGR QRR PNKMQKFPNNATQDR RK
Sbjct: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRLPNKMQKFPNNATQDRPRK 60

Query: 61  VQRFTDSRSSLRQGALAKRRSNFQVNHFAFANEVARKTSVAPIRPRPFNRRAPNWNKTRV 120
           +QRF DSRSSLRQGALA RRSNFQ N FA A EVARK +VAPIRPR F RRAPNWNKTRV
Sbjct: 61  LQRFMDSRSSLRQGALANRRSNFQGNQFALATEVARKAAVAPIRPRAFTRRAPNWNKTRV 120

Query: 121 EA-PPVQRKPFTNGTFIPKVTAPVLLQTNATPRQRPQTLDSLFANMKEQRLRGLSQRQNG 180
           +A PPV +K FTNG F+PKV+AP   QTNATPRQRPQTLDSLFANMKEQRLR LSQRQNG
Sbjct: 121 DAPPPVPKKSFTNGNFVPKVSAPAQQQTNATPRQRPQTLDSLFANMKEQRLRVLSQRQNG 180

Query: 181 QNGIA-QRRNGGRQQRPPWGRGRF 203
             G A Q+RNGGRQQRPPWG+  F
Sbjct: 181 GGGGAQQQRNGGRQQRPPWGKRPF 204

[Close]
BLAST of Sed0016945 vs. TAIR 10
Match: AT4G10970.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 124.4 bits (311), Expect = 1.0e-28
Identity = 98/210 (46.67%), Postives = 125/210 (59.52%), Query Frame = 0 

Query: 4   KPLTTEAIAITEKKMDMSLDDIIKMTK-NTG-NKGRNQRRFPNKMQKFPNNATQDRTRKV 63
           KP+TTE +A+TEKKMDMSLD+IIKM K NT  NKG+ QR   NK +KF + A ++   K 
Sbjct: 5   KPITTETVALTEKKMDMSLDEIIKMEKSNTNVNKGKKQRVL-NKKEKF-SGAAKNSAVKA 64

Query: 64  QRFTDSRSSLRQGALAKRRSNFQVNHFAFANEVARKTSVAPIRPRPFN-RRAPNWNKTRV 123
           QR+ DSRS +RQGA AK+RSNFQ N F     VARK + A  R RP+N  R  N N++R 
Sbjct: 65  QRYMDSRSDVRQGAFAKKRSNFQGNQFPVTTTVARKAASATPRGRPYNGGRMTNTNQSRF 124

Query: 124 EAPPVQRKPFTNGTFIPKVTAP-----VLLQTN---ATPRQRPQTLDSLFANMKEQRLRG 183
            APP Q +    G F+ K         V  Q N      RQ PQTLDS FANMKE+R+R 
Sbjct: 125 IAPPAQNRASQRG-FVGKQQQQQREKIVQQQANGGGGGQRQWPQTLDSRFANMKEERMR- 184

Query: 184 LSQRQNGQNGIAQRRNGGRQQR---PPWGR 200
           + +  + ++ +     G  QQ+    PW R
Sbjct: 185 MRRFADNRSNVGNNGAGSHQQQRSMVPWVR 210

[Close]
BLAST of Sed0016945 vs. TAIR 10
Match: AT4G10970.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 124.4 bits (311), Expect = 1.0e-28
Identity = 98/210 (46.67%), Postives = 125/210 (59.52%), Query Frame = 0 

Query: 4   KPLTTEAIAITEKKMDMSLDDIIKMTK-NTG-NKGRNQRRFPNKMQKFPNNATQDRTRKV 63
           KP+TTE +A+TEKKMDMSLD+IIKM K NT  NKG+ QR   NK +KF + A ++   K 
Sbjct: 5   KPITTETVALTEKKMDMSLDEIIKMEKSNTNVNKGKKQRVL-NKKEKF-SGAAKNSAVKA 64

Query: 64  QRFTDSRSSLRQGALAKRRSNFQVNHFAFANEVARKTSVAPIRPRPFN-RRAPNWNKTRV 123
           QR+ DSRS +RQGA AK+RSNFQ N F     VARK + A  R RP+N  R  N N++R 
Sbjct: 65  QRYMDSRSDVRQGAFAKKRSNFQGNQFPVTTTVARKAASATPRGRPYNGGRMTNTNQSRF 124

Query: 124 EAPPVQRKPFTNGTFIPKVTAP-----VLLQTN---ATPRQRPQTLDSLFANMKEQRLRG 183
            APP Q +    G F+ K         V  Q N      RQ PQTLDS FANMKE+R+R 
Sbjct: 125 IAPPAQNRASQRG-FVGKQQQQQREKIVQQQANGGGGGQRQWPQTLDSRFANMKEERMR- 184

Query: 184 LSQRQNGQNGIAQRRNGGRQQR---PPWGR 200
           + +  + ++ +     G  QQ+    PW R
Sbjct: 185 MRRFADNRSNVGNNGAGSHQQQRSMVPWVR 210

[Close]
BLAST of Sed0016945 vs. TAIR 10
Match: AT4G10970.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 124.4 bits (311), Expect = 1.0e-28
Identity = 98/210 (46.67%), Postives = 125/210 (59.52%), Query Frame = 0 

Query: 4   KPLTTEAIAITEKKMDMSLDDIIKMTK-NTG-NKGRNQRRFPNKMQKFPNNATQDRTRKV 63
           KP+TTE +A+TEKKMDMSLD+IIKM K NT  NKG+ QR   NK +KF + A ++   K 
Sbjct: 5   KPITTETVALTEKKMDMSLDEIIKMEKSNTNVNKGKKQRVL-NKKEKF-SGAAKNSAVKA 64

Query: 64  QRFTDSRSSLRQGALAKRRSNFQVNHFAFANEVARKTSVAPIRPRPFN-RRAPNWNKTRV 123
           QR+ DSRS +RQGA AK+RSNFQ N F     VARK + A  R RP+N  R  N N++R 
Sbjct: 65  QRYMDSRSDVRQGAFAKKRSNFQGNQFPVTTTVARKAASATPRGRPYNGGRMTNTNQSRF 124

Query: 124 EAPPVQRKPFTNGTFIPKVTAP-----VLLQTN---ATPRQRPQTLDSLFANMKEQRLRG 183
            APP Q +    G F+ K         V  Q N      RQ PQTLDS FANMKE+R+R 
Sbjct: 125 IAPPAQNRASQRG-FVGKQQQQQREKIVQQQANGGGGGQRQWPQTLDSRFANMKEERMR- 184

Query: 184 LSQRQNGQNGIAQRRNGGRQQR---PPWGR 200
           + +  + ++ +     G  QQ+    PW R
Sbjct: 185 MRRFADNRSNVGNNGAGSHQQQRSMVPWVR 210

[Close]
BLAST of Sed0016945 vs. TAIR 10
Match: AT4G10970.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 124.4 bits (311), Expect = 1.0e-28
Identity = 98/210 (46.67%), Postives = 125/210 (59.52%), Query Frame = 0 

Query: 4   KPLTTEAIAITEKKMDMSLDDIIKMTK-NTG-NKGRNQRRFPNKMQKFPNNATQDRTRKV 63
           KP+TTE +A+TEKKMDMSLD+IIKM K NT  NKG+ QR   NK +KF + A ++   K 
Sbjct: 5   KPITTETVALTEKKMDMSLDEIIKMEKSNTNVNKGKKQRVL-NKKEKF-SGAAKNSAVKA 64

Query: 64  QRFTDSRSSLRQGALAKRRSNFQVNHFAFANEVARKTSVAPIRPRPFN-RRAPNWNKTRV 123
           QR+ DSRS +RQGA AK+RSNFQ N F     VARK + A  R RP+N  R  N N++R 
Sbjct: 65  QRYMDSRSDVRQGAFAKKRSNFQGNQFPVTTTVARKAASATPRGRPYNGGRMTNTNQSRF 124

Query: 124 EAPPVQRKPFTNGTFIPKVTAP-----VLLQTN---ATPRQRPQTLDSLFANMKEQRLRG 183
            APP Q +    G F+ K         V  Q N      RQ PQTLDS FANMKE+R+R 
Sbjct: 125 IAPPAQNRASQRG-FVGKQQQQQREKIVQQQANGGGGGQRQWPQTLDSRFANMKEERMR- 184

Query: 184 LSQRQNGQNGIAQRRNGGRQQR---PPWGR 200
           + +  + ++ +     G  QQ+    PW R
Sbjct: 185 MRRFADNRSNVGNNGAGSHQQQRSMVPWVR 210

[Close]
BLAST of Sed0016945 vs. TAIR 10
Match: AT4G10970.5 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 52 Blast hits to 51 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-19
Identity = 88/209 (42.11%), Postives = 110/209 (52.63%), Query Frame = 0 

Query: 18  MDMSLDDIIKMTK-NTG-NKGRNQRRFPNKMQKFPNNATQDRTRKVQRFTDSRSSLRQGA 77
           MDMSLD+IIKM K NT  NKG+ QR   NK +KF + A ++   K QR+ DSRS +RQGA
Sbjct: 1   MDMSLDEIIKMEKSNTNVNKGKKQRVL-NKKEKF-SGAAKNSAVKAQRYMDSRSDVRQGA 60

Query: 78  LAKRRSNFQVNHFAFANEVARKTSVAPIRPRPFN-RRAPN-------------WNKTRVE 137
            AK+RSNFQ N F     VARK + A  R RP+N  R  N             W   R  
Sbjct: 61  FAKKRSNFQGNQFPVTTTVARKAASATPRGRPYNGGRMTNTNQSSWSIVGRLKWVDARFI 120

Query: 138 APPVQRKPFTNGTFIPKVTAP-----VLLQTN---ATPRQRPQTLDSLFANMKEQRLRGL 197
           APP Q +    G F+ K         V  Q N      RQ PQTLDS FANMKE+R+R +
Sbjct: 121 APPAQNRASQRG-FVGKQQQQQREKIVQQQANGGGGGQRQWPQTLDSRFANMKEERMR-M 180

Query: 198 SQRQNGQNGIAQRRNGGRQQR---PPWGR 200
            +  + ++ +     G  QQ+    PW R
Sbjct: 181 RRFADNRSNVGNNGAGSHQQQRSMVPWVR 205

The following BLAST results are available for this feature:
BLAST of Sed0016945 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022941743.12.0e-8584.80uncharacterized protein LOC111447019 isoform X1 [Cucurbita moschata] >XP_0229417... [more]
KAG7031152.17.4e-8583.82hypothetical protein SDJN02_05192, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6600514.17.4e-8583.82Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial, partial [Cucurbit... [more]
XP_023528268.16.3e-8483.82uncharacterized protein LOC111791234 isoform X1 [Cucurbita pepo subsp. pepo] >XP... [more]
XP_022982836.12.4e-8382.84uncharacterized protein LOC111481570 isoform X1 [Cucurbita maxima] >XP_022982844... [more]
BLAST of Sed0016945 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sed0016945 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FPB69.4e-8684.80uncharacterized protein LOC111447019 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1J5N51.2e-8382.84uncharacterized protein LOC111481570 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1C7V39.1e-8182.04uncharacterized protein LOC111008218 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A5A7TPS54.5e-8081.86Pentatricopeptide repeat (PPR) superfamily protein isoform 2 OS=Cucumis melo var... [more]
A0A5D3CYD84.5e-8081.86Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Sed0016945 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G10970.11.0e-2846.67unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G10970.21.0e-2846.67unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G10970.31.0e-2846.67unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G10970.41.0e-2846.67unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G10970.51.2e-1942.11unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..204
NoneNo IPR availablePANTHERPTHR36048:SF1RIBOSOME MATURATION FACTORcoord: 1..204
NoneNo IPR availablePANTHERPTHR36048RIBOSOME MATURATION FACTORcoord: 1..204

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0016945.1Sed0016945.1mRNA